Citrus Sinensis ID: 023259

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-----
Protein Sequence
MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPLQVVELPETDSSATVDIGAVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQKDVRPELYERFHMPEWFQKQGIPTSGL
Secondary Structure (PSIPRED)
cccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccHHHHHHHHHHcccEEEEccccHHHHHHHHHHHcccccccccccccccccccccEEEEcccccccccccEEEEEccccccccccccEEEccccccccccccccccHHHHHHHcccHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccHEEEcccccccccHcccccccccccccccccEEEEEEEccccEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccEEEcccccHHcHHHHcccHccEEEEEccccEEEEccccccEEEccccccccccHHcHHHHHHHHcccHHHHHHcccccccc
Coil and Loop (DISEMBL)
MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALghhpllsssasasthafkplqvvelpetdssatvdigavrdsgddvvsEERLQKLTVVLDLDETLVCAYetsslpvtlrnqatgagLKWFEMEClssdkecegkpkinhvtvferPGLREFLKQLSEFADLILFTAGlegyarplvdridgenlfslrlyrpsttsteyrehvkdLSCLSKDLCRTlivdnnpfsfllqplngipcipfsagqphdnqkdvrpelyerfhmpewfqkqgiptsgl
Flexible Loop (DISEMBL)
MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPLQVVelpetdssatvdigavrdsgddvvseerLQKLtvvldldeTLVCAyetsslpvtlrNQATGAGLKWFEMECLSSdkecegkpkiNHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRlyrpsttsteyrehvKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQKDVRPELYERFhmpewfqkqgiptsgl
Low Complexity Region (SEG)
MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPllsssasasTHAFKPLQVVELPETDSSATVDIGAVRDSGDDVVSEERLQKltvvldldetlvCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQKDVRPELYERFHMPEWFQKQGIPTSGL
Disordered region (IsUnstruct)
********VAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLL*****************************I*********VVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLY**************DLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSA*************LYERFHMPEWF**********
Disordered Region (DISOPRED)
*********AYSHRSIQVWRTLLNWLAFFFQIFAKILRA****************************************************LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQKDVRPELYERFHMPEWFQKQGIP****
Disordered Region (DISEMBL)
MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPLQVVELPETDSSATVDIGAVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQKDVRPELYERFHMPEWFQK********
Disordered Region (DISPRO)
****TQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLL*******************************AVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQKDVRPELYERFHMPEWFQKQGIP****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPLQVVELPETDSSATVDIGAVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQKDVRPELYERFHMPEWFQKQGIPTSGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	285	2.2.26 [Sep-21-2011]
O14595	271	Carboxy-terminal domain R	yes	no	0.487	0.512	0.377	2e-16
Q9GZU7	261	Carboxy-terminal domain R	no	no	0.463	0.505	0.388	2e-15
P58466	261	Carboxy-terminal domain R	yes	no	0.463	0.505	0.388	2e-15
Q8BX07	270	Carboxy-terminal domain R	no	no	0.487	0.514	0.358	2e-15
Q09695	325	Uncharacterized protein C	yes	no	0.484	0.424	0.318	5e-15
Q9XYL0	306	Probable C-terminal domai	no	no	0.456	0.424	0.366	5e-15
Q9PTJ6	275	CTD small phosphatase-lik	no	no	0.463	0.48	0.355	6e-15
Q54GB2	567	CTD small phosphatase-lik	no	no	0.526	0.264	0.321	7e-15
Q07949	397	Probable phosphatase PSR2	yes	no	0.501	0.360	0.306	8e-15
P58465	276	CTD small phosphatase-lik	no	no	0.463	0.478	0.348	1e-14

>sp|O14595|CTDS2_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 OS=Homo sapiens GN=CTDSP2 PE=1 SV=2

 Score = 86.3 bits (212), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 20/159 (12%)

Query: 87  VSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPK 146
           V+EE   ++ VV+DLDETLV    +S  P+   N A                 E EG   
Sbjct: 94  VTEEDQGRICVVIDLDETLV---HSSFKPI---NNAD-----------FIVPIEIEGT-- 134

Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
            + V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D   +F  RL+R S   
Sbjct: 135 THQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFRESCVF 194

Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
            +   +VKDLS L +DL +TLI+DN+P S++  P N +P
Sbjct: 195 HQ-GCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVP 232

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells. May contribute to the development of sarcomas.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6

>sp|Q9GZU7|CTDS1_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Homo sapiens GN=CTDSP1 PE=1 SV=1

 Score = 83.6 bits (205), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 83/152 (54%), Gaps = 20/152 (13%)

Query: 94  KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVF 153
           K+ VV+DLDETLV    +S  PV   N A       F +       E +G   ++ V V 
Sbjct: 90  KICVVIDLDETLV---HSSFKPV---NNAD------FIIPV-----EIDGV--VHQVYVL 130

Query: 154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHV 213
           +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S        +V
Sbjct: 131 KRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCV-FHRGNYV 189

Query: 214 KDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
           KDLS L +DL R LI+DN+P S++  P N +P
Sbjct: 190 KDLSRLGRDLRRVLILDNSPASYVFHPDNAVP 221

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|P58466|CTDS1_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 83/152 (54%), Gaps = 20/152 (13%)

Query: 94  KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVF 153
           K+ VV+DLDETLV    +S  PV   N A       F +       E +G   ++ V V 
Sbjct: 90  KICVVIDLDETLV---HSSFKPV---NNAD------FIIPV-----EIDGV--VHQVYVL 130

Query: 154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHV 213
           +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S        +V
Sbjct: 131 KRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCV-FHRGNYV 189

Query: 214 KDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
           KDLS L +DL R LI+DN+P S++  P N +P
Sbjct: 190 KDLSRLGRDLRRVLILDNSPASYVFHPDNAVP 221

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation (By similarity). Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q8BX07|CTDS2_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 OS=Mus musculus GN=Ctdsp2 PE=2 SV=1

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 20/159 (12%)

Query: 87  VSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPK 146
           V+E+   ++ VV+DLDETLV    +S  P+   N A                 E EG   
Sbjct: 93  VTEQDQGRICVVIDLDETLV---HSSFKPI---NNAD-----------FIVPVEIEGT-- 133

Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
            + V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D   +F  RL+R +   
Sbjct: 134 THQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFREACVF 193

Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
            +   +VKDLS L +DL +T+I+DN+P S++  P N +P
Sbjct: 194 HQ-GCYVKDLSRLGRDLRKTVILDNSPASYIFHPENAVP 231

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q09695|YA22_SCHPO Uncharacterized protein C2F7.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2F7.02c PE=1 SV=1

 Score = 81.6 bits (200), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 87/160 (54%), Gaps = 22/160 (13%)

Query: 87  VSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPK 146
           +++E   K  ++LDLDETLV                  +  K+ E        E +G   
Sbjct: 150 IAKEDEGKKCLILDLDETLV-----------------HSSFKYIEPADFVVSIEIDG--- 189

Query: 147 INH-VTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTT 205
           + H V V +RPG+ EFLK++ +  ++++FTA L  YA P++D +D  ++   RL+R +  
Sbjct: 190 LQHDVRVVKRPGVDEFLKKMGDMFEIVVFTASLAKYADPVLDMLDHSHVIRHRLFREACC 249

Query: 206 STEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
           + E    VKDLS L ++L  ++I+DN+P S++  P + +P
Sbjct: 250 NYE-GNFVKDLSQLGRNLEDSIIIDNSPSSYIFHPSHAVP 288

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q9XYL0|CTDS_DICDI Probable C-terminal domain small phosphatase OS=Dictyostelium discoideum GN=fcpA PE=3 SV=1

 Score = 81.6 bits (200), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 80/150 (53%), Gaps = 20/150 (13%)

Query: 96  TVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFER 155
           T+VLDLDETLV                  +  K           E EG   I+ V V +R
Sbjct: 138 TLVLDLDETLV-----------------HSSFKPVHNPDFIVPVEIEGT--IHQVYVVKR 178

Query: 156 PGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKD 215
           P + +FL+ ++E  ++++FTA L  YA P++D +D   +   RL+R S  + +   +VKD
Sbjct: 179 PFVDDFLRAIAEKFEIVVFTASLAKYADPVLDFLDTGRVIHYRLFRESCHNHK-GNYVKD 237

Query: 216 LSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
           LS L +DL  T+IVDN+P S+L  P N IP
Sbjct: 238 LSRLGRDLKSTIIVDNSPSSYLFHPENAIP 267

May function as a phosphatase involved in the regulation of cell growth and differentiation.

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q9PTJ6|CTDSL_CHICK CTD small phosphatase-like protein OS=Gallus gallus GN=NFI1 PE=2 SV=2

 Score = 81.6 bits (200), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 81/152 (53%), Gaps = 20/152 (13%)

Query: 94  KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVF 153
           K  VV+DLDETLV    +S  P++  +                   E +G   I+ V V 
Sbjct: 105 KKCVVIDLDETLV---HSSFKPISNADFIVPV--------------EIDGT--IHQVYVL 145

Query: 154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHV 213
           +RP + EFL+++ E  + +LFTA L  YA P+ D +D   +F  RL+R S        +V
Sbjct: 146 KRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCV-FHRGNYV 204

Query: 214 KDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
           KDLS L ++L + +IVDN+P S++  P N +P
Sbjct: 205 KDLSRLGRELSKVIIVDNSPASYIFHPENAVP 236

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.

Gallus gallus (taxid: 9031)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum GN=ctdspl2 PE=3 SV=1

 Score = 81.3 bits (199), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 92/199 (46%), Gaps = 49/199 (24%)

Query: 94  KLTVVLDLDETLV-CAYETS-----SLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKI 147
           K+++VLDLDETLV C+ E       + PV   N       K                   
Sbjct: 390 KISLVLDLDETLVHCSTEPLEQPHLTFPVFFNNTEYQVFAK------------------- 430

Query: 148 NHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTST 207
                 +RP   EFL ++S+  ++I+FTA  E YA  L++ ID  N    RLYR S    
Sbjct: 431 ------KRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNKIKYRLYRDSCVYV 484

Query: 208 EYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC---------------IPFSAG 252
           +   ++KDLS L +DL + +I+DN+P SF  Q  NGIP                +PF   
Sbjct: 485 D-GNYLKDLSVLGRDLKQVVIIDNSPQSFGFQVDNGIPIESWFEDENDKELLQLVPFLES 543

Query: 253 QPHDNQKDVRPELYERFHM 271
               N +DVRP + ++F +
Sbjct: 544 LT--NVEDVRPHIRDKFKL 560

Probable phosphatase.

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q07949|PSR2_YEAST Probable phosphatase PSR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PSR2 PE=1 SV=1

 Score = 81.3 bits (199), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 33/176 (18%)

Query: 89  EERLQKLTVVLDLDETLVCA---YETSS---LPVTLRNQATGAGLKWFEMECLSSDKECE 142
           +E  QK  ++LDLDETLV +   Y  S+   LPV + +Q                     
Sbjct: 222 QEFQQKKCLILDLDETLVHSSFKYMHSADFVLPVEIDDQ--------------------- 260

Query: 143 GKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRP 202
               +++V V +RPG+ EFL ++S+  ++++FTA +  YA PL+D +D       RL+R 
Sbjct: 261 ----VHNVYVIKRPGVDEFLNRVSQLYEVVVFTASVSRYANPLLDTLDPNGTIHHRLFRE 316

Query: 203 STTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQ 258
           +  + E   ++K+LS + + L  T+I+DN+P S++  P + +P   + +   HDN+
Sbjct: 317 ACYNYE-GNYIKNLSQIGRPLSETIILDNSPASYIFHPQHAVPISSWFSDT-HDNE 370

Probable phosphatase. Involved in the response to sodium and lithium ion stress (but not to potassium or sorbitol stress) by inducing transcription of the sodium pump ENA1/PMR2. Acts through a calcineurin-independent pathway and is functionally redundant with PSR1. Also involved in the general stress response; acts together with WHI2 to activate stress response element (STRE)-mediated gene expression, possibly through dephosphorylation of MSN2.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|P58465|CTDSL_MOUSE CTD small phosphatase-like protein OS=Mus musculus GN=Ctdspl PE=2 SV=3

 Score = 80.9 bits (198), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 20/152 (13%)

Query: 94  KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVF 153
           K  VV+DLDETLV    +S  P++  +                   E +G   I+ V V 
Sbjct: 106 KKCVVIDLDETLV---HSSFKPISNADFIVPV--------------EIDGT--IHQVYVL 146

Query: 154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHV 213
           +RP + EFL+++ +  + +LFTA L  YA P+ D +D   +F  RL+R S        +V
Sbjct: 147 KRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCV-FHRGNYV 205

Query: 214 KDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
           KDLS L ++L + +IVDN+P S++  P N +P
Sbjct: 206 KDLSRLGRELSKVIIVDNSPASYIFHPENAVP 237

Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	285
297820342	304	NLI interacting factor family protein [A	0.992	0.930	0.686	1e-115
225448441	318	PREDICTED: CTD small phosphatase-like pr	0.971	0.871	0.692	1e-114
15228783	305	haloacid dehalogenase-like hydrolase dom	0.989	0.924	0.688	1e-113
225448443	298	PREDICTED: CTD small phosphatase-like pr	0.908	0.869	0.683	1e-111
224109316	261	predicted protein [Populus trichocarpa]	0.870	0.950	0.762	1e-108
357492701	305	CTD small phosphatase-like protein [Medi	0.982	0.918	0.663	1e-106
449463020	297	PREDICTED: CTD small phosphatase-like pr	0.971	0.932	0.682	1e-104
224101149	307	predicted protein [Populus trichocarpa]	0.884	0.820	0.742	1e-104
363808300	304	uncharacterized protein LOC100783451 [Gl	0.978	0.917	0.686	1e-104
388492828	292	unknown [Lotus japonicus]	0.943	0.921	0.655	1e-100

>gi|297820342|ref|XP_002878054.1| NLI interacting factor family protein [Arabidopsis lyrata subsp. lyrata] gi|297323892|gb|EFH54313.1| NLI interacting factor family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/300 (68%), Positives = 234/300 (78%), Gaps = 17/300 (5%)

Query: 1   MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPL 60
           MAELTQA+V YS RS QVW+TL+NWLAFF+QIF +ILRA+G+HPLLSSSA AS   FKPL
Sbjct: 1   MAELTQADVVYSPRSFQVWKTLVNWLAFFYQIFLQILRAVGYHPLLSSSAKASADGFKPL 60

Query: 61  QVVELPE--TDSSATVDIGAVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTL 118
             +EL +  ++S  TVDI +   S        R  +L VVLDLDETLVCAYETSSLP  L
Sbjct: 61  PAIELLDRASESPTTVDIASTTTSDSSDCERSRFHRLKVVLDLDETLVCAYETSSLPAAL 120

Query: 119 RNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGL 178
           RNQA  AGLKWFE+ECLS+DKEC+GKPKIN+VTVFERPGL EFL+QLSEFADL+LFTAGL
Sbjct: 121 RNQAIEAGLKWFELECLSTDKECDGKPKINYVTVFERPGLHEFLEQLSEFADLVLFTAGL 180

Query: 179 EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLL 238
           EGYARPLVDRID   + S RLYRPST ST+YR+HVKDL   SK++CRT+IVDNNPFSFLL
Sbjct: 181 EGYARPLVDRIDTRKVLSNRLYRPSTVSTQYRDHVKDLLSTSKNMCRTVIVDNNPFSFLL 240

Query: 239 QPLNGIPCIPFSAGQPHDNQ---------------KDVRPELYERFHMPEWFQKQGIPTS 283
           QP NGIPCI FSAGQP+D Q                DVRP LY+RF MPEWF+KQGIP S
Sbjct: 241 QPSNGIPCIAFSAGQPNDTQLLDVILPLLKQLSEEDDVRPTLYDRFRMPEWFEKQGIPPS 300

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448441|ref|XP_002273682.1| PREDICTED: CTD small phosphatase-like protein 2 isoform 1 [Vitis vinifera] gi|297736603|emb|CBI25474.3| unnamed protein product [Vitis vinifera]

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/312 (69%), Positives = 240/312 (76%), Gaps = 35/312 (11%)

Query: 2   AELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRA------------LGHHPLLSSS 49
           AELTQAEV Y+ RS+Q+WRTLLNWLAFFFQIF +ILR             L HH LL SS
Sbjct: 10  AELTQAEV-YAPRSLQLWRTLLNWLAFFFQIFLQILRGTPSVTQVLSYVGLRHHSLLPSS 68

Query: 50  ASASTHAFKPLQVVELPETDSSA-TVDIGAVRDSGDDVVSEER-LQKLTVVLDLDETLVC 107
            S     FKPL VVELPE +    +V I A   +     + +R  +K TVVLDLDETLVC
Sbjct: 69  PS-----FKPLPVVELPELEPPPDSVQINATDGTDSAAAAVDRPAEKFTVVLDLDETLVC 123

Query: 108 AYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSE 167
           AYETSSLP ++RNQA  +GLKWFE+EC+SSDKECEGKPK+N+VTVFERPGLREFLKQLSE
Sbjct: 124 AYETSSLPASIRNQAIESGLKWFELECVSSDKECEGKPKVNYVTVFERPGLREFLKQLSE 183

Query: 168 FADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTL 227
           F++L+LFTAGLEGYARPLVDRID ENLFSLRLYRPST STEYREHVKDLSCLSKDLCR +
Sbjct: 184 FSELVLFTAGLEGYARPLVDRIDVENLFSLRLYRPSTISTEYREHVKDLSCLSKDLCRIV 243

Query: 228 IVDNNPFSFLLQPLNGIPCIPFSAGQPHDN---------------QKDVRPELYERFHMP 272
           IVDNNPFSFLLQPLNG+PCIPFSAGQP+D                Q DVRP LY+RF MP
Sbjct: 244 IVDNNPFSFLLQPLNGVPCIPFSAGQPNDGQLLEVLLPLLKHLSQQNDVRPVLYDRFRMP 303

Query: 273 EWFQKQGIPTSG 284
           EWFQK GIP SG
Sbjct: 304 EWFQKHGIPASG 315

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15228783|ref|NP_191155.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gi|7573491|emb|CAB87850.1| putative protein [Arabidopsis thaliana] gi|20466680|gb|AAM20657.1| putative protein [Arabidopsis thaliana] gi|21537285|gb|AAM61626.1| unknown [Arabidopsis thaliana] gi|23198192|gb|AAN15623.1| putative protein [Arabidopsis thaliana] gi|332645940|gb|AEE79461.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/302 (68%), Positives = 237/302 (78%), Gaps = 20/302 (6%)

Query: 1   MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPL 60
           MAELTQA+V YS RS QVW+TL+NWLAFF+QIF +ILRA+G+HPLLSSSA AS   FKPL
Sbjct: 1   MAELTQADVVYSPRSFQVWKTLVNWLAFFYQIFLQILRAVGYHPLLSSSAKASADGFKPL 60

Query: 61  QVVELPE--TDSSATVDIGAV--RDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPV 116
             +EL +  ++S  TV+I A    DS  D  +  R Q+L VVLDLDETLVCAYETSSLP 
Sbjct: 61  PAIELLDRASESPTTVEIAATTTSDSCSDG-ARSRFQRLKVVLDLDETLVCAYETSSLPA 119

Query: 117 TLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTA 176
            LRNQA  AGLKWFE+ECLS+DKE +GKPKIN+VTVFERPGL EFL+QLSEFADLILFTA
Sbjct: 120 ALRNQAIEAGLKWFELECLSTDKEYDGKPKINYVTVFERPGLHEFLEQLSEFADLILFTA 179

Query: 177 GLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSF 236
           GLEGYARPLVDRID   + + RLYRPST ST+YR+HVKDL   SK++CRT+IVDNNPFSF
Sbjct: 180 GLEGYARPLVDRIDTRKVLTNRLYRPSTVSTQYRDHVKDLLSTSKNMCRTVIVDNNPFSF 239

Query: 237 LLQPLNGIPCIPFSAGQPHDNQ---------------KDVRPELYERFHMPEWFQKQGIP 281
           LLQP NGIPCI FSAGQP+D Q                DVRP LY+RF MPEWF+KQGIP
Sbjct: 240 LLQPSNGIPCIAFSAGQPNDTQLLDVILPLLKQLSEEDDVRPTLYDRFRMPEWFEKQGIP 299

Query: 282 TS 283
            S
Sbjct: 300 PS 301

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448443|ref|XP_002274356.1| PREDICTED: CTD small phosphatase-like protein 2 isoform 2 [Vitis vinifera]

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 212/310 (68%), Positives = 233/310 (75%), Gaps = 51/310 (16%)

Query: 2   AELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRA------------LGHHPLLSSS 49
           AELTQAEV Y+ RS+Q+WRTLLNWLAFFFQIF +ILR             L HH LL SS
Sbjct: 10  AELTQAEV-YAPRSLQLWRTLLNWLAFFFQIFLQILRGTPSVTQVLSYVGLRHHSLLPSS 68

Query: 50  ASASTHAFKPLQVVELPETDSSATVDIGAVRDSGDDVVSEERLQKLTVVLDLDETLVCAY 109
            S     FKPL VVELPE +              D V       ++ VVLDLDETLVCAY
Sbjct: 69  PS-----FKPLPVVELPELEPPP-----------DSV-------QINVVLDLDETLVCAY 105

Query: 110 ETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFA 169
           ETSSLP ++RNQA  +GLKWFE+EC+SSDKECEGKPK+N+VTVFERPGLREFLKQLSEF+
Sbjct: 106 ETSSLPASIRNQAIESGLKWFELECVSSDKECEGKPKVNYVTVFERPGLREFLKQLSEFS 165

Query: 170 DLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV 229
           +L+LFTAGLEGYARPLVDRID ENLFSLRLYRPST STEYREHVKDLSCLSKDLCR +IV
Sbjct: 166 ELVLFTAGLEGYARPLVDRIDVENLFSLRLYRPSTISTEYREHVKDLSCLSKDLCRIVIV 225

Query: 230 DNNPFSFLLQPLNGIPCIPFSAGQPHD---------------NQKDVRPELYERFHMPEW 274
           DNNPFSFLLQPLNG+PCIPFSAGQP+D                Q DVRP LY+RF MPEW
Sbjct: 226 DNNPFSFLLQPLNGVPCIPFSAGQPNDGQLLEVLLPLLKHLSQQNDVRPVLYDRFRMPEW 285

Query: 275 FQKQGIPTSG 284
           FQK GIP SG
Sbjct: 286 FQKHGIPASG 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109316|ref|XP_002315157.1| predicted protein [Populus trichocarpa] gi|222864197|gb|EEF01328.1| predicted protein [Populus trichocarpa]

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/261 (76%), Positives = 219/261 (83%), Gaps = 13/261 (4%)

Query: 1   MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPL 60
           MAELTQ EV YS RSIQ+WRTL +WLAFFF IF +ILRA+G   L      +S+H FKPL
Sbjct: 1   MAELTQPEVVYSPRSIQLWRTLWDWLAFFFHIFLQILRAVGPQTL------SSSHPFKPL 54

Query: 61  QVVELPETDSS--ATVDIGAVRDSGDDVVS-EERLQKLTVVLDLDETLVCAYETSSLPVT 117
            +VELP+T     ATV+I A    G D VS  E +QKL VVLDLDETLVCAYETSSLP  
Sbjct: 55  PLVELPDTTDPPPATVEISA----GTDAVSANEPIQKLKVVLDLDETLVCAYETSSLPAA 110

Query: 118 LRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAG 177
           LRNQAT AGLKWFE++C+SSDKECEGKPKIN+VTVFERPGL EFLKQLSEFA+L+LFTAG
Sbjct: 111 LRNQATEAGLKWFELDCISSDKECEGKPKINYVTVFERPGLDEFLKQLSEFAELVLFTAG 170

Query: 178 LEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFL 237
           LEGYARPLVDRID EN FSLRLYRPST+STEYREHVKDLSC+SKD CR +IVDNNPFSFL
Sbjct: 171 LEGYARPLVDRIDTENRFSLRLYRPSTSSTEYREHVKDLSCISKDPCRIVIVDNNPFSFL 230

Query: 238 LQPLNGIPCIPFSAGQPHDNQ 258
           LQPLNGIPC+PFSAGQPHD Q
Sbjct: 231 LQPLNGIPCVPFSAGQPHDTQ 251

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357492701|ref|XP_003616639.1| CTD small phosphatase-like protein [Medicago truncatula] gi|355517974|gb|AES99597.1| CTD small phosphatase-like protein [Medicago truncatula]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/306 (66%), Positives = 239/306 (78%), Gaps = 26/306 (8%)

Query: 1   MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHA---- 56
           M ELTQ EV    R+ QVW++LL+W AFFFQIF++I+R LGH+PLLSSS+S+S+ +    
Sbjct: 1   MGELTQTEVYSPPRTQQVWKSLLSWFAFFFQIFSQIIRTLGHYPLLSSSSSSSSSSSSTS 60

Query: 57  --FKPLQVVELPETDSSATVDIGAVRDSGDDVVSEER-LQKLTVVLDLDETLVCAYETSS 113
             FKPL  VEL + DSS++    A+  + D   +++R  QKLTVVLDLDETLVCAYETSS
Sbjct: 61  SSFKPLPSVELQDFDSSSS----ALEITADYPAADQRPFQKLTVVLDLDETLVCAYETSS 116

Query: 114 LPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLIL 173
           LP  LR+QA  AGL WF+MEC+SSDKE EG+PKIN+VTVFERPGL+EFL +LSEFADL+L
Sbjct: 117 LPAALRSQAIEAGLNWFDMECVSSDKEGEGRPKINYVTVFERPGLKEFLTKLSEFADLVL 176

Query: 174 FTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNP 233
           FTAGLEGYARPLVD ID EN FSLRLYRPST STE+REHVKDL+C+SKDL R +IVDNNP
Sbjct: 177 FTAGLEGYARPLVDIIDKENRFSLRLYRPSTISTEHREHVKDLTCISKDLDRIVIVDNNP 236

Query: 234 FSFLLQPLNGIPCIPFSAGQPHDN---------------QKDVRPELYERFHMPEWFQKQ 278
           FSF+LQP+NGIPCIPFSAG PHD                Q DVRP LYE+FHM +WFQKQ
Sbjct: 237 FSFVLQPVNGIPCIPFSAGHPHDTQLLDVILPLLKQLSEQNDVRPLLYEKFHMTDWFQKQ 296

Query: 279 GIPTSG 284
           GIP S 
Sbjct: 297 GIPASS 302

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463020|ref|XP_004149232.1| PREDICTED: CTD small phosphatase-like protein 2-like [Cucumis sativus] gi|449530283|ref|XP_004172125.1| PREDICTED: CTD small phosphatase-like protein 2-like [Cucumis sativus]

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 204/299 (68%), Positives = 233/299 (77%), Gaps = 22/299 (7%)

Query: 1   MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPL 60
           MAELTQ EV YS  ++ VW+TLLNWLAFFFQIF  IL A GH  LLSS +S+S      L
Sbjct: 1   MAELTQPEV-YSPGTLHVWKTLLNWLAFFFQIFVSILTAFGHLRLLSSHSSSSPSFKP-L 58

Query: 61  QVVELPETD--SSATVDIGAVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTL 118
            VVELP+ +  +++ VDI +V D  +   S+  ++KLT+VLDLDETL+CAYETS+LP  +
Sbjct: 59  PVVELPDHELLAASAVDIASVEDEEE---SDGLMEKLTIVLDLDETLICAYETSTLPAII 115

Query: 119 RNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGL 178
           R+QA  AGLK FE+EC SSDK+CEGKPK+N+VTVFERPGL +FLK L  FADL+LFTAGL
Sbjct: 116 RSQAIEAGLKSFELECFSSDKDCEGKPKVNYVTVFERPGLHDFLKHLGGFADLVLFTAGL 175

Query: 179 EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLL 238
           EGYARPLVDRID EN FSLRLYRPST STEYR+HVKDLSCLSKDL R +IVDNNPFSFLL
Sbjct: 176 EGYARPLVDRIDEENRFSLRLYRPSTISTEYRDHVKDLSCLSKDLRRVVIVDNNPFSFLL 235

Query: 239 QPLNGIPCIPFSAGQPHDN---------------QKDVRPELYERFHMPEWFQKQGIPT 282
           QP NGIPCIPFSAGQPHD+               Q DVRP LYERFHMPEWFQK GIPT
Sbjct: 236 QPQNGIPCIPFSAGQPHDSQLLDVILPLLEHLSQQNDVRPVLYERFHMPEWFQKHGIPT 294

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101149|ref|XP_002312160.1| predicted protein [Populus trichocarpa] gi|222851980|gb|EEE89527.1| predicted protein [Populus trichocarpa]

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/264 (74%), Positives = 214/264 (81%), Gaps = 12/264 (4%)

Query: 1   MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPL 60
           MAELT  EV YS RSIQ+WR L NWLAFFFQIF +ILRA+G       S S  +H FKPL
Sbjct: 1   MAELTHPEVVYSPRSIQLWRALWNWLAFFFQIFLQILRAVGPR-----SLSTPSHTFKPL 55

Query: 61  QVVELPETDSS--ATVDIGAVRDSGDDVVS-EERLQKLTVVLDLDETLVCAYETSSLPVT 117
            + ELPET     ATV+I A    G D +S  E +QKLTVVLDLDETLVCAYETSSLP  
Sbjct: 56  PLGELPETTDPPPATVEIPA----GTDAISANEPIQKLTVVLDLDETLVCAYETSSLPAL 111

Query: 118 LRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAG 177
           L NQA  AGLKWFE+EC+SSDKECEGK KIN+VTVFERPGL EFLKQLSEFA+L+LFTAG
Sbjct: 112 LCNQAMEAGLKWFELECVSSDKECEGKLKINYVTVFERPGLDEFLKQLSEFAELVLFTAG 171

Query: 178 LEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFL 237
           LEGYARPLVDRID EN FSLRLYRPSTTSTEY+EHVKDLSC+S D CR +IVDNNPFSFL
Sbjct: 172 LEGYARPLVDRIDTENRFSLRLYRPSTTSTEYQEHVKDLSCISNDPCRIVIVDNNPFSFL 231

Query: 238 LQPLNGIPCIPFSAGQPHDNQKDV 261
           LQPLNGIPC+PFSAGQPHD Q  +
Sbjct: 232 LQPLNGIPCVPFSAGQPHDTQVGI 255

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363808300|ref|NP_001242244.1| uncharacterized protein LOC100783451 [Glycine max] gi|255641128|gb|ACU20842.1| unknown [Glycine max]

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 210/306 (68%), Positives = 235/306 (76%), Gaps = 27/306 (8%)

Query: 1   MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHA---- 56
           M ELTQAEV YS R+ QVWR LL+WLAFFFQIF +I+RALGH+PLLS S+S+   +    
Sbjct: 1   MGELTQAEV-YSPRTQQVWRALLSWLAFFFQIFFQIIRALGHYPLLSFSSSSDAASSSNA 59

Query: 57  -FKPLQVVELPETDS--SATVDIGAVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSS 113
            FKPL  VEL E DS  S+ + I  +  S  D      + KLTVVLDLDETLVCAYETSS
Sbjct: 60  SFKPLPSVELSEHDSPPSSALQISPLHCSPKD----HPIPKLTVVLDLDETLVCAYETSS 115

Query: 114 LPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLIL 173
           LP  LR QA   GL WFE+EC+S DKE EGKPKIN+VTVFERPGL+EFLKQLSEFAD+ L
Sbjct: 116 LPAALRTQAIEGGLNWFELECVSIDKEGEGKPKINYVTVFERPGLKEFLKQLSEFADMAL 175

Query: 174 FTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNP 233
           FTAGLEGYARPLVDRID EN F LRLYRPST STEYREHVKDL+C+SKDLCR +IVDNNP
Sbjct: 176 FTAGLEGYARPLVDRIDVENRFCLRLYRPSTISTEYREHVKDLTCISKDLCRIVIVDNNP 235

Query: 234 FSFLLQPLNGIPCIPFSAGQPHDNQ---------------KDVRPELYERFHMPEWFQKQ 278
           FSF+LQP+NGIPCIPFSAGQPHD Q                D+RP LYE+FHMP+WFQKQ
Sbjct: 236 FSFVLQPVNGIPCIPFSAGQPHDTQLLDVILPLLKQLSERNDIRPLLYEKFHMPDWFQKQ 295

Query: 279 GIPTSG 284
           GIP S 
Sbjct: 296 GIPASS 301

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388492828|gb|AFK34480.1| unknown [Lotus japonicus]

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/299 (65%), Positives = 224/299 (74%), Gaps = 30/299 (10%)

Query: 4   LTQAEVAYS-HRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPLQV 62
           LTQ +V YS  R+ Q WR LL+W  FFFQIF +I+    H+PLLS S+S+ + +F+P+  
Sbjct: 6   LTQCDVVYSVPRTQQAWRALLSWFGFFFQIFYQIIGVFAHYPLLSFSSSSDSSSFEPVPA 65

Query: 63  VE--LPETDSSATVDIGAVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRN 120
           V+  LP   SS+         +GDD      LQKLTVVLDL+ETLVCAYETSS+P TLR 
Sbjct: 66  VDQDLPPLRSSSA--------AGDD----GPLQKLTVVLDLNETLVCAYETSSVPATLRT 113

Query: 121 QATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEG 180
           QA  AGL WFEMECL SDK+ EG  K ++VTVFERPGL+EFLKQLSEFADL+LFTAGLEG
Sbjct: 114 QAIQAGLNWFEMECLCSDKDAEGITKTSYVTVFERPGLKEFLKQLSEFADLVLFTAGLEG 173

Query: 181 YARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQP 240
           YARPLVDRID +NLFSLRLYRPST STE+REHVKDL+C+SKDLCR +IVDNNPFSFLLQP
Sbjct: 174 YARPLVDRIDSDNLFSLRLYRPSTISTEHREHVKDLTCISKDLCRIVIVDNNPFSFLLQP 233

Query: 241 LNGIPCIPFSAGQPHDNQ---------------KDVRPELYERFHMPEWFQKQGIPTSG 284
            NGIPCI FSAGQP D Q               KDVR  LYE+FHMPEWFQKQGIP S 
Sbjct: 234 DNGIPCISFSAGQPCDTQLLDVILPLLKHLSAEKDVRHVLYEQFHMPEWFQKQGIPASS 292

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	285
TAIR|locus:2082048	305	AT3G55960 [Arabidopsis thalian	0.989	0.924	0.625	1e-93
TAIR|locus:2019352	221	AT1G29780 [Arabidopsis thalian	0.361	0.466	0.466	2.8e-18
TAIR|locus:2019332	278	AT1G29770 [Arabidopsis thalian	0.340	0.348	0.474	3.6e-18
TAIR|locus:2171978	272	AT5G45700 [Arabidopsis thalian	0.343	0.360	0.44	4.7e-16
UNIPROTKB|G4N711	505	MGG_03646 "Serine/threonine-pr	0.428	0.241	0.354	1.2e-15
FB|FBgn0036556	329	CG5830 [Drosophila melanogaste	0.340	0.294	0.41	1.8e-15
UNIPROTKB|Q2KJ43	271	CTDSP2 "Uncharacterized protei	0.361	0.380	0.415	2.6e-15
UNIPROTKB|E2R9C5	271	CTDSP2 "Uncharacterized protei	0.361	0.380	0.415	2.6e-15
UNIPROTKB|O14595	271	CTDSP2 "Carboxy-terminal domai	0.361	0.380	0.415	2.6e-15
UNIPROTKB|I3LSE7	250	CTDSP2 "Uncharacterized protei	0.361	0.412	0.415	2.6e-15

TAIR|locus:2082048 AT3G55960 [Arabidopsis thaliana (taxid:3702)]

 Score = 933 (333.5 bits), Expect = 1.0e-93, P = 1.0e-93
 Identities = 189/302 (62%), Positives = 218/302 (72%)

Query:     1 MAELTQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPXXXXXXXXXTHAFKPL 60
             MAELTQA+V YS RS QVW+TL+NWLAFF+QIF +ILRA+G+HP            FKPL
Sbjct:     1 MAELTQADVVYSPRSFQVWKTLVNWLAFFYQIFLQILRAVGYHPLLSSSAKASADGFKPL 60

Query:    61 QVVELPE--TDSSATVDIGAVR--DSGDDVVSEERLQKXXXXXXXXXXXXCAYETSSLPV 116
               +EL +  ++S  TV+I A    DS  D  +  R Q+            CAYETSSLP 
Sbjct:    61 PAIELLDRASESPTTVEIAATTTSDSCSDG-ARSRFQRLKVVLDLDETLVCAYETSSLPA 119

Query:   117 TLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTA 176
              LRNQA  AGLKWFE+ECLS+DKE +GKPKIN+VTVFERPGL EFL+QLSEFADLILFTA
Sbjct:   120 ALRNQAIEAGLKWFELECLSTDKEYDGKPKINYVTVFERPGLHEFLEQLSEFADLILFTA 179

Query:   177 GLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSF 236
             GLEGYARPLVDRID   + + RLYRPST ST+YR+HVKDL   SK++CRT+IVDNNPFSF
Sbjct:   180 GLEGYARPLVDRIDTRKVLTNRLYRPSTVSTQYRDHVKDLLSTSKNMCRTVIVDNNPFSF 239

Query:   237 LLQPLNGIPCIPFSAGQPHDNQ---------------KDVRPELYERFHMPEWFQKQGIP 281
             LLQP NGIPCI FSAGQP+D Q                DVRP LY+RF MPEWF+KQGIP
Sbjct:   240 LLQPSNGIPCIAFSAGQPNDTQLLDVILPLLKQLSEEDDVRPTLYDRFRMPEWFEKQGIP 299

Query:   282 TS 283
              S
Sbjct:   300 PS 301

GO:0005634 "nucleus" evidence=ISM

GO:0016791 "phosphatase activity" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2019352 AT1G29780 [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 49/105 (46%), Positives = 69/105 (65%)

Query:   146 KINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTT 205
             +I  + V +RPG+ EFL++L E   +++FTAGLE YA  ++D++D   + S RLYR S T
Sbjct:    83 EIMPIFVVKRPGVTEFLERLGENYKVVVFTAGLEEYASQVLDKLDKNGVISQRLYRDSCT 142

Query:   206 STEYREHVKDLSCL-SKDLCRTLIVDNNPFSFLLQPLNGIPCIPF 249
                 + +VKDLS +  KDL   LIVD+NP S+ LQP NG+P   F
Sbjct:   143 EVNGK-YVKDLSLVVGKDLRSALIVDDNPSSYSLQPENGVPIKAF 186

GO:0005886 "plasma membrane" evidence=ISM

GO:0016791 "phosphatase activity" evidence=IEA

TAIR|locus:2019332 AT1G29770 [Arabidopsis thaliana (taxid:3702)]

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 47/99 (47%), Positives = 67/99 (67%)

Query:   152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYRE 211
             V +RPG+ EFL+++S+   + +FTAGL  YA  ++D++D   + S RLYR S T    R 
Sbjct:   143 VVKRPGVTEFLERISKNYRVAIFTAGLPEYASQVLDKLDKNRVISQRLYRDSCTEVNGR- 201

Query:   212 HVKDLSCLSK-DLCRTLIVDNNPFSFLLQPLNGIPCIPF 249
             + KDLS ++K DL   L+VD+NPFS+ LQP NG+P  PF
Sbjct:   202 YAKDLSLVAKNDLGSVLLVDDNPFSYSLQPDNGVPIKPF 240

GO:0005634 "nucleus" evidence=ISM

GO:0016791 "phosphatase activity" evidence=IEA

TAIR|locus:2171978 AT5G45700 [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 44/100 (44%), Positives = 64/100 (64%)

Query:   152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYR 210
             V +RPG+ EFLK++ E   +++FTAGL  YA  ++D++D E  + S   YR + +  + R
Sbjct:   137 VIKRPGVDEFLKKIGEKYQIVVFTAGLREYASLVLDKLDPERRVISRSFYRDACSEIDGR 196

Query:   211 EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS 250
               VKDL  + +DL R +IVD+NP S+ LQP N  P  PFS
Sbjct:   197 L-VKDLGFVMRDLRRVVIVDDNPNSYALQPENAFPIKPFS 235

GO:0005739 "mitochondrion" evidence=ISM

GO:0016791 "phosphatase activity" evidence=IEA

GO:0001708 "cell fate specification" evidence=RCA

UNIPROTKB|G4N711 MGG_03646 "Serine/threonine-protein phosphatase dullard" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 204 (76.9 bits), Expect = 1.2e-15, P = 1.2e-15
 Identities = 45/127 (35%), Positives = 79/127 (62%)

Query:   140 ECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRL 199
             E EG    ++V V +RPG+ +F+K++ E  ++++FTA +  Y  PL+D++D  N+   RL
Sbjct:   364 EIEGN--YHNVYVIKRPGVDQFMKRVGELYEVVVFTASVSKYGDPLLDQLDIHNVVHHRL 421

Query:   200 YRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQK 259
             +R S  + +   +VKDLS + +DL  T+I+DN+P S++  P + +P   + +   HDN+ 
Sbjct:   422 FRESCYNHQ-GNYVKDLSQVGRDLKDTIIIDNSPTSYIFHPQHAVPISSWFS-DAHDNEL 479

Query:   260 -DVRPEL 265
              D+ P L
Sbjct:   480 LDLIPVL 486

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

FB|FBgn0036556 CG5830 [Drosophila melanogaster (taxid:7227)]

 Score = 197 (74.4 bits), Expect = 1.8e-15, P = 1.8e-15
 Identities = 41/100 (41%), Positives = 64/100 (64%)

Query:   147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
             ++ V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D  N+F  RL+R S   
Sbjct:   123 VHQVYVLKRPHVDEFLQKMGELYECVLFTASLAKYADPVADLLDKWNVFRARLFRESCVY 182

Query:   207 TEYR-EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
               YR  ++KDL+ L +DL + +IVDN+P S++  P N +P
Sbjct:   183 --YRGNYIKDLNRLGRDLQKIVIVDNSPASYIFHPDNAVP 220

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|Q2KJ43 CTDSP2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 44/106 (41%), Positives = 65/106 (61%)

Query:   140 ECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRL 199
             E EG    + V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D   +F  RL
Sbjct:   130 EIEGTT--HQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARL 187

Query:   200 YRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
             +R S    +   +VKDLS L +DL +TLI+DN+P S++  P N +P
Sbjct:   188 FRESCVFHQGC-YVKDLSRLGRDLRKTLILDNSPASYIFHPENAVP 232

GO:0008420 "CTD phosphatase activity" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IEA

UNIPROTKB|E2R9C5 CTDSP2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 44/106 (41%), Positives = 65/106 (61%)

Query:   140 ECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRL 199
             E EG    + V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D   +F  RL
Sbjct:   130 EIEGTT--HQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARL 187

Query:   200 YRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
             +R S    +   +VKDLS L +DL +TLI+DN+P S++  P N +P
Sbjct:   188 FRESCVFHQGC-YVKDLSRLGRDLRKTLILDNSPASYIFHPENAVP 232

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|O14595 CTDSP2 "Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2" [Homo sapiens (taxid:9606)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 44/106 (41%), Positives = 65/106 (61%)

Query:   140 ECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRL 199
             E EG    + V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D   +F  RL
Sbjct:   130 EIEGTT--HQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARL 187

Query:   200 YRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
             +R S    +   +VKDLS L +DL +TLI+DN+P S++  P N +P
Sbjct:   188 FRESCVFHQGC-YVKDLSRLGRDLRKTLILDNSPASYIFHPENAVP 232

GO:0046872 "metal ion binding" evidence=IEA

GO:0008420 "CTD phosphatase activity" evidence=IDA

GO:0006470 "protein dephosphorylation" evidence=IDA

GO:0005654 "nucleoplasm" evidence=TAS

GO:0006987 "activation of signaling protein activity involved in unfolded protein response" evidence=TAS

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=TAS

UNIPROTKB|I3LSE7 CTDSP2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 44/106 (41%), Positives = 65/106 (61%)

Query:   140 ECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRL 199
             E EG    + V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D   +F  RL
Sbjct:   109 EIEGTT--HQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARL 166

Query:   200 YRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
             +R S    +   +VKDLS L +DL +TLI+DN+P S++  P N +P
Sbjct:   167 FRESCVFHQGC-YVKDLSRLGRDLRKTLILDNSPASYIFHPENAVP 211

GO:0008420 "CTD phosphatase activity" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	0.691
3rd Layer	3.1.3.16	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: scaffold_502734.1 annotation not avaliable (304 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	285
TIGR02251	162	TIGR02251, HIF-SF_euk, Dullard-like phosphatase do	6e-52
smart00577	148	smart00577, CPDc, catalytic domain of ctd-like pho	2e-44
pfam03031	153	pfam03031, NIF, NLI interacting factor-like phosph	1e-40
COG5190	390	COG5190, FCP1, TFIIF-interacting CTD phosphatases,	4e-17
TIGR02250	156	TIGR02250, FCP1_euk, FCP1-like phosphatase, phosph	2e-05

>gnl|CDD|233801 TIGR02251, HIF-SF_euk, Dullard-like phosphatase domain

 Score =  167 bits (424), Expect = 6e-52
 Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 21/166 (12%)

Query: 94  KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVF 153
           K T+VLDLDETLV     S+  +   +    A  K   +             KI  V VF
Sbjct: 1   KKTLVLDLDETLVH----STFKMPKVD----ADFKVPVLIDG----------KIIPVYVF 42

Query: 154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYREH 212
           +RP + EFL+++S++ +L++FTA LE YA P++D +D    + S RLYR S   T  + +
Sbjct: 43  KRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGK-Y 101

Query: 213 VKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQ 258
           VKDLS + KDL + +I+DN+P+S+ LQP N IP   +  G P+D +
Sbjct: 102 VKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF-GDPNDTE 146

This model represents the putative phosphatase domain of a family of eukaryotic proteins including "Dullard" , and the NLI interacting factor (NIF)-like phosphatases. This domain is a member of the haloacid dehalogenase (HAD) superfamily by virtue of a conserved set of three catalytic motifs and a conserved fold as predicted by PSIPRED. The third motif in this family is distinctive (hhhhDNxPxxa) and aparrently lacking the last aspartate. This domain is classified as a "Class III" HAD, since there is no large "cap" domain found between motifs 1 and 2 or motifs 2 and 3. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the pfam03031. Length = 162

>gnl|CDD|214729 smart00577, CPDc, catalytic domain of ctd-like phosphatases

 Score =  146 bits (372), Expect = 2e-44
 Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 19/166 (11%)

Query: 93  QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTV 152
           +K T+VLDLDETLV +   S    T R+                           + V V
Sbjct: 1   KKKTLVLDLDETLVHSTHRSFKEWTNRDFIV----------------PVLIDGHPHGVYV 44

Query: 153 FERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLR-LYRPSTTSTEYRE 211
            +RPG+ EFLK+ SE  +L++FTAGL  YA P++D +D +  F  R L+R      + + 
Sbjct: 45  KKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGK- 103

Query: 212 HVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDN 257
           +VKDLS L++DL + +I+D++P S+   P N IP  P+    P D 
Sbjct: 104 YVKDLSLLNRDLSKVIIIDDSPDSWPFHPENLIPIKPWFGD-PDDT 148

Length = 148

>gnl|CDD|217328 pfam03031, NIF, NLI interacting factor-like phosphatase

 Score =  137 bits (348), Expect = 1e-40
 Identities = 67/165 (40%), Positives = 90/165 (54%), Gaps = 31/165 (18%)

Query: 95  LTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFE 154
            T+VLDLDETLV +     LP                                + V V +
Sbjct: 1   KTLVLDLDETLVHSSFEPDLPFDFVL------------------------NFNHGVYVKK 36

Query: 155 RPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYREHV 213
           RPGL EFL++LS++ ++++FTA  + YA P++D++D +   F  RLYR S T      +V
Sbjct: 37  RPGLDEFLQELSKYYEIVIFTASSKEYADPVLDKLDPKKKYFKHRLYRESCT-----FYV 91

Query: 214 KDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQ 258
           KDLS L +DL R +IVDN+P SFLLQP NGIP  PF  G P D +
Sbjct: 92  KDLSLLGRDLSRVVIVDNSPRSFLLQPDNGIPIPPFY-GDPDDTE 135

This family contains a number of NLI interacting factor isoforms and also an N-terminal regions of RNA polymerase II CTC phosphatase and FCP1 serine phosphatase. This region has been identified as the minimal phosphatase domain. Length = 153

>gnl|CDD|227517 COG5190, FCP1, TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

 Score = 80.2 bits (198), Expect = 4e-17
 Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 35/198 (17%)

Query: 86  VVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKP 145
            VS+    K T+VLDLDETLV    +S   +TL +         F ++        E   
Sbjct: 204 PVSKSTSPKKTLVLDLDETLV---HSSFRYITLLD---------FLVKV-------EISL 244

Query: 146 KINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTT 205
             + V V +RP L  FL +LS+  +L+ FTA ++ YA P++D +D + +FS RL+R S  
Sbjct: 245 LQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKRYADPVLDILDSDKVFSHRLFRESCV 304

Query: 206 STEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP---------------CIPFS 250
           S     ++KD+S + + L + +I+DN+P S+   P N IP                +PF 
Sbjct: 305 SYL-GVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLNLLPFL 363

Query: 251 AGQPHDNQKDVRPELYER 268
              P  + KDV   L  R
Sbjct: 364 EDLPDRDLKDVSSILQSR 381

Length = 390

>gnl|CDD|131304 TIGR02250, FCP1_euk, FCP1-like phosphatase, phosphatase domain

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 20/115 (17%)

Query: 91  RLQKLTVVLDLDETLVCAYETSSL------PVTLRNQATGAGLKWFEMECLSSDKECEGK 144
           R +KL +VLDLD+TL+   +  +L       +   N  T   L+ F +            
Sbjct: 3   REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLG----------- 51

Query: 145 PKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN-LFSLR 198
             + ++T   RP L EFLK+ S+  ++ ++T G   YA+ +   ID +   F  R
Sbjct: 52  -TMWYLTKL-RPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDR 104

This model represents the phosphatase domain of the humanRNA polymerase II subunit A C-terminal domain phosphatase (FCP1, ) and closely related phosphatases from eukaryotes including plants, fungi and slime mold. This domain is a member of the haloacid dehalogenase (HAD) superfamily by virtue of a conserved set of three catalytic motifs and a conserved fold as predicted by PSIPRED. The third motif in this family is distinctive (hhhhDDppphW). This domain is classified as a "Class III" HAD, since there is no large "cap" domain found between motifs 1 and 2 or motifs 2 and 3.This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the pfam03031. Length = 156

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	285
KOG1605	262	consensus TFIIF-interacting CTD phosphatase, inclu	100.0
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	100.0
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	99.98
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	99.97
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	99.96
KOG2832	393	consensus TFIIF-interacting CTD phosphatase, inclu	99.95
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.94
COG5190	390	FCP1 TFIIF-interacting CTD phosphatases, including	99.84
KOG0323	635	consensus TFIIF-interacting CTD phosphatases, incl	99.7
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	98.92
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	98.85
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	98.84
PRK14988	224	GMP/IMP nucleotidase; Provisional	98.83
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	98.82
PRK13288	214	pyrophosphatase PpaX; Provisional	98.82
PRK13226	229	phosphoglycolate phosphatase; Provisional	98.78
PRK11587	218	putative phosphatase; Provisional	98.78
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	98.75
PLN02575	381	haloacid dehalogenase-like hydrolase	98.73
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	98.71
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	98.71
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	98.67
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	98.64
PRK13223	272	phosphoglycolate phosphatase; Provisional	98.62
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	98.62
PLN02940	382	riboflavin kinase	98.6
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.6
COG4996	164	Predicted phosphatase [General function prediction	98.6
PRK13225	273	phosphoglycolate phosphatase; Provisional	98.59
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.59
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	98.58
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	98.55
PRK13222	226	phosphoglycolate phosphatase; Provisional	98.53
PRK10563	221	6-phosphogluconate phosphatase; Provisional	98.53
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.49
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	98.45
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	98.44
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	98.44
PHA02597	197	30.2 hypothetical protein; Provisional	98.42
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	98.4
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	98.38
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	98.34
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	98.32
PHA02530	300	pseT polynucleotide kinase; Provisional	98.29
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.27
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	98.26
COG0546	220	Gph Predicted phosphatases [General function predi	98.22
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	98.2
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	98.15
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	98.14
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	98.12
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	98.12
PRK06769	173	hypothetical protein; Validated	98.12
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	98.11
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	98.05
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	98.03
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	98.01
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	98.0
PRK09449	224	dUMP phosphatase; Provisional	97.93
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	97.92
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	97.9
PRK13582	205	thrH phosphoserine phosphatase; Provisional	97.9
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	97.89
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	97.87
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	97.87
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	97.82
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	97.81
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	97.76
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	97.73
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	97.72
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	97.71
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	97.69
PLN02954	224	phosphoserine phosphatase	97.68
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	97.67
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	97.65
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	97.64
COG5190	390	FCP1 TFIIF-interacting CTD phosphatases, including	97.63
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	97.62
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	97.57
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	97.51
PRK11133	322	serB phosphoserine phosphatase; Provisional	97.48
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	97.43
PLN02811	220	hydrolase	97.4
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	97.32
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	97.31
PRK08238	479	hypothetical protein; Validated	97.3
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	97.25
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.12
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	97.09
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	97.06
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	96.87
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	96.77
PRK10748	238	flavin mononucleotide phosphatase; Provisional	96.75
PTZ00445	219	p36-lilke protein; Provisional	96.71
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	96.66
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	96.55
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	96.44
COG0241	181	HisB Histidinol phosphatase and related phosphatas	96.41
PRK11590	211	hypothetical protein; Provisional	96.36
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	96.36
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.16
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	96.15
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	96.1
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	96.07
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	95.88
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	95.69
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	95.64
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	95.55
COG4359	220	Uncharacterized conserved protein [Function unknow	95.51
PRK01158	230	phosphoglycolate phosphatase; Provisional	95.44
PRK10513	270	sugar phosphate phosphatase; Provisional	95.43
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	95.4
PLN02645	311	phosphoglycolate phosphatase	95.21
PRK10444	248	UMP phosphatase; Provisional	95.16
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	95.09
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	95.08
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	94.98
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	94.97
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	94.96
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	94.94
PRK10976	266	putative hydrolase; Provisional	94.87
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	94.86
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	94.76
COG4502	180	5'(3')-deoxyribonucleotidase [Nucleotide transport	94.69
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	94.46
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	94.29
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	94.19
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	94.0
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	93.93
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	93.92
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	93.75
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	93.66
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	93.64
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	93.37
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	93.37
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	93.27
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	92.93
PTZ00174	247	phosphomannomutase; Provisional	92.91
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	92.75
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	92.55
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	91.92
PLN02423	245	phosphomannomutase	91.41
PLN02887	580	hydrolase family protein	91.29
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	90.76
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	90.72
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	90.35
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	89.71
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	89.59
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	89.49
COG2503	274	Predicted secreted acid phosphatase [General funct	89.12
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	88.46
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	88.26
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	87.94
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	87.68
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	87.39
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	87.35
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	87.32
COG4229	229	Predicted enolase-phosphatase [Energy production a	87.2
PRK10748	238	flavin mononucleotide phosphatase; Provisional	87.12
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	86.72
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	86.26
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	86.03
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	85.36
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	84.96
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	84.92
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	84.71
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	84.7
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	84.65
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	84.16
PRK09449	224	dUMP phosphatase; Provisional	83.91
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	83.3
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	82.38
PLN03017	366	trehalose-phosphatase	82.3
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	82.23
PLN02151	354	trehalose-phosphatase	81.65
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	80.09
PLN02580	384	trehalose-phosphatase	80.07

>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=100.00  E-value=2.1e-38  Score=289.22  Aligned_cols=240  Identities=35%  Similarity=0.413  Sum_probs=166.9

Q ss_pred             ccceeEecchhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCcccccCCCccCccccC--CCCCCCccccccc-ccC
Q 023259            5 TQAEVAYSHRSIQVWRTLLNWLAFFFQIFAKILRALGHHPLLSSSASASTHAFKPLQVVEL--PETDSSATVDIGA-VRD   81 (285)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~~-~~~   81 (285)
                      +.+.+ ++ +..+.|...+.|.....+.    ......+...+.+..+.+.+....+.+.-  .-...+ ..+... ..-
T Consensus         4 ~~~~~-~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   76 (262)
T KOG1605|consen    4 SITTA-TT-KNDEEQKPGLDSSTRDVET----AMMLVEDSSQSSSNASSAFSPEFDEELYSEDLFEKYQ-PVKYASQTPL   76 (262)
T ss_pred             cceeh-hh-cCchhhccccccccccccc----cceeccccccchhhhhhccccccchhhhhhhhhhhcc-cccccccccc
Confidence            34455 77 8888888888888777765    11122222222221111122222221111  000111 111111 111


Q ss_pred             CCCCCcccccCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHH
Q 023259           82 SGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREF  161 (285)
Q Consensus        82 ~~~~~~~~~~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eF  161 (285)
                      +..........+|++|||||||||+||...  +++.. .    +   .|.+     ++..+|.  ...+||.+|||+++|
T Consensus        77 ~~~~~~~~~~~~kk~lVLDLDeTLvHss~~--~~~~~-~----~---d~~~-----~v~~~~~--~~~~yV~kRP~vdeF  139 (262)
T KOG1605|consen   77 SPVLPLRLATVGRKTLVLDLDETLVHSSLN--LKPIV-N----A---DFTV-----PVEIDGH--IHQVYVRKRPHVDEF  139 (262)
T ss_pred             cccCCcccccCCCceEEEeCCCcccccccc--cCCCC-C----c---ceee-----eeeeCCc--ceEEEEEcCCCHHHH
Confidence            112222344679999999999999997420  11100 0    0   1222     2233332  356899999999999


Q ss_pred             HHHhhhcceEEEEccCchhhHHHHHHHhcC-CCceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccCCC
Q 023259          162 LKQLSEFADLILFTAGLEGYARPLVDRIDG-ENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQP  240 (285)
Q Consensus       162 L~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp-~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p  240 (285)
                      |+.++++||+++|||+.+.||.+|++.||+ .+.|.+|+||++|... +|.|+|||..+|+|+++||||||+|.+|.+||
T Consensus       140 L~~~s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~-~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p  218 (262)
T KOG1605|consen  140 LSRVSKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLK-DGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQP  218 (262)
T ss_pred             HHHhHHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeE-CCcEEEEcceeccCcccEEEEcCChHHhccCc
Confidence            999999999999999999999999999999 6789999999999976 59999999999999999999999999999999


Q ss_pred             CCeeeeCccCCCCCCCCc--------------cCcHHHHHhhcC
Q 023259          241 LNGIPCIPFSAGQPHDNQ--------------KDVRPELYERFH  270 (285)
Q Consensus       241 ~NgI~I~~F~~g~~~D~~--------------~DVR~vL~~~f~  270 (285)
                      +|||+|++|. .++.|++              +|||+++++.|+
T Consensus       219 ~NgIpI~sw~-~d~~D~eLL~LlpfLe~L~~~~Dvr~~l~~~~~  261 (262)
T KOG1605|consen  219 ENGIPIKSWF-DDPTDTELLKLLPFLEALAFVDDVRPILARRFG  261 (262)
T ss_pred             cCCCcccccc-cCCChHHHHHHHHHHHHhcccccHHHHHHHhhc
Confidence            9999999997 7788988              999999999876

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=100.00  E-value=5.7e-34  Score=243.95  Aligned_cols=155  Identities=43%  Similarity=0.638  Sum_probs=129.2

Q ss_pred             ceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhcceEEE
Q 023259           94 KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLIL  173 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~yeIvI  173 (285)
                      |++|||||||||||+.+...  .        ... .|.+.+     ...|  ....+||++|||++|||++|+++|+|+|
T Consensus         1 k~~lvlDLDeTLi~~~~~~~--~--------~~~-~~~~~~-----~~~~--~~~~~~v~~RPgl~eFL~~l~~~yei~I   62 (162)
T TIGR02251         1 KKTLVLDLDETLVHSTFKMP--K--------VDA-DFKVPV-----LIDG--KIIPVYVFKRPHVDEFLERVSKWYELVI   62 (162)
T ss_pred             CcEEEEcCCCCcCCCCCCCC--C--------CCC-ceEEEE-----EecC--cEEEEEEEECCCHHHHHHHHHhcCEEEE
Confidence            68999999999999854321  0        000 121111     1112  1357899999999999999999999999


Q ss_pred             EccCchhhHHHHHHHhcCCC-ceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccCCCCCeeeeCccCCC
Q 023259          174 FTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAG  252 (285)
Q Consensus       174 ~Ta~~~~YA~~Vl~~LDp~~-~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~~F~~g  252 (285)
                      ||++.+.||+++++.|||.+ +|.++++|++|...+ +.+.|||+.+|++++++|+|||++..+..+++|||+|.+|. |
T Consensus        63 ~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~-~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~-~  140 (162)
T TIGR02251        63 FTASLEEYADPVLDILDRGGKVISRRLYRESCVFTN-GKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF-G  140 (162)
T ss_pred             EcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeC-CCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCC-C
Confidence            99999999999999999987 899999999998764 56999999999999999999999999999999999999997 7


Q ss_pred             CCCCCc-cCcHHHHHhh
Q 023259          253 QPHDNQ-KDVRPELYER  268 (285)
Q Consensus       253 ~~~D~~-~DVR~vL~~~  268 (285)
                      +.+|++ .++.++|..-
T Consensus       141 ~~~D~~L~~l~~~L~~l  157 (162)
T TIGR02251       141 DPNDTELLNLIPFLEGL  157 (162)
T ss_pred             CCCHHHHHHHHHHHHHH
Confidence            788888 8888888653

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=99.98  E-value=2.8e-32  Score=240.14  Aligned_cols=144  Identities=23%  Similarity=0.292  Sum_probs=114.5

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhcce
Q 023259           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFAD  170 (285)
Q Consensus        91 ~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~ye  170 (285)
                      ..+|++|||||||||||+....                                   ...++.+|||+++||++|+++||
T Consensus        18 ~~~kklLVLDLDeTLvh~~~~~-----------------------------------~~~~~~kRP~l~eFL~~~~~~fe   62 (195)
T TIGR02245        18 REGKKLLVLDIDYTLFDHRSPA-----------------------------------ETGEELMRPYLHEFLTSAYEDYD   62 (195)
T ss_pred             CCCCcEEEEeCCCceEcccccC-----------------------------------CCceEEeCCCHHHHHHHHHhCCE
Confidence            4589999999999999852110                                   12458899999999999999999


Q ss_pred             EEEEccCchhhHHHHHHHhcCCC--ceeEEEecCcccc-----cCCc-cccccccccCC------CCCcEEEEECCcccc
Q 023259          171 LILFTAGLEGYARPLVDRIDGEN--LFSLRLYRPSTTS-----TEYR-EHVKDLSCLSK------DLCRTLIVDNNPFSF  236 (285)
Q Consensus       171 IvI~Ta~~~~YA~~Vl~~LDp~~--~f~~~l~r~~c~~-----~k~~-~~~KdL~~Lgr------dl~~vVIVDDs~~~~  236 (285)
                      |+||||+++.||+.+++.|++..  .+...++.++|..     .+.+ .++|||+.+|+      ++++||||||++.++
T Consensus        63 IvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~  142 (195)
T TIGR02245        63 IVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNF  142 (195)
T ss_pred             EEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHH
Confidence            99999999999999999997632  3444555577631     1223 35999998843      889999999999999


Q ss_pred             cCCCCCeeeeCccCCC---CCCCCc--------------cCcHHHHHhhc
Q 023259          237 LLQPLNGIPCIPFSAG---QPHDNQ--------------KDVRPELYERF  269 (285)
Q Consensus       237 ~~~p~NgI~I~~F~~g---~~~D~~--------------~DVR~vL~~~f  269 (285)
                      ..||+|||+|++|.++   +.+|++              +|||+++++.+
T Consensus       143 ~~~P~N~i~I~~f~~~~~~~~~D~eL~~L~~yL~~la~~~Dvr~~~~~~w  192 (195)
T TIGR02245       143 LMNPQNGLKIRPFKKAHANRGTDQELLKLTQYLKTIAELEDFSSLDHKEW  192 (195)
T ss_pred             hcCCCCccccCCccccCCCCcccHHHHHHHHHHHHHhcCcccchhhhccc
Confidence            9999999999999854   356665              78888877654

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=99.97  E-value=1.1e-31  Score=227.07  Aligned_cols=148  Identities=43%  Similarity=0.661  Sum_probs=109.7

Q ss_pred             eEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhcceEEEE
Q 023259           95 LTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILF  174 (285)
Q Consensus        95 ~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~yeIvI~  174 (285)
                      |+|||||||||||+...+..+..            +..      .    . ....++|++|||+++||++|+++|+|+||
T Consensus         1 k~LVlDLD~TLv~~~~~~~~~~~------------~~~------~----~-~~~~~~v~~RP~l~~FL~~l~~~~ev~i~   57 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPLPYD------------FKI------I----D-QRGGYYVKLRPGLDEFLEELSKHYEVVIW   57 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCTT-S------------EEE------E----T-EEEEEEEEE-TTHHHHHHHHHHHCEEEEE
T ss_pred             CEEEEeCCCcEEEEeecCCCCcc------------cce------e----c-cccceeEeeCchHHHHHHHHHHhceEEEE
Confidence            68999999999998654322100            000      0    0 12467899999999999999999999999


Q ss_pred             ccCchhhHHHHHHHhcCC-CceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccCCCCCeeeeCccCCCC
Q 023259          175 TAGLEGYARPLVDRIDGE-NLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQ  253 (285)
Q Consensus       175 Ta~~~~YA~~Vl~~LDp~-~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~~F~~g~  253 (285)
                      |++++.||++|++.|+|. .+|.++++|++|...+ +.+.|||+++|+++++||+|||++.+|..+++|+|.|++|. ++
T Consensus        58 T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~-~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~-~~  135 (159)
T PF03031_consen   58 TSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFDK-GSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFF-GD  135 (159)
T ss_dssp             -SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEET-TEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----S-SC
T ss_pred             EeehhhhhhHHHHhhhhhccccccccccccccccc-cccccchHHHhhccccEEEEeCCHHHeeccCCceEEecccc-CC
Confidence            999999999999999994 6899999999998654 45689999999999999999999999999999999999998 55


Q ss_pred             -CCCCc-cCcHHHHHh
Q 023259          254 -PHDNQ-KDVRPELYE  267 (285)
Q Consensus       254 -~~D~~-~DVR~vL~~  267 (285)
                       ++|++ .++.++|++
T Consensus       136 ~~~D~~L~~l~~~L~~  151 (159)
T PF03031_consen  136 TPNDRELLRLLPFLEE  151 (159)
T ss_dssp             HTT--HHHHHHHHHHH
T ss_pred             CcchhHHHHHHHHHHH
Confidence             67877 667777743

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=99.96  E-value=8.7e-30  Score=217.21  Aligned_cols=142  Identities=26%  Similarity=0.364  Sum_probs=113.3

Q ss_pred             CCceEEEEeCCCcccccccCCCCchhhc----cccc--ccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHh
Q 023259           92 LQKLTVVLDLDETLVCAYETSSLPVTLR----NQAT--GAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQL  165 (285)
Q Consensus        92 ~~k~tLVLDLD~TLV~s~~~s~lp~~~~----~~~~--~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~l  165 (285)
                      .+|++||||||+|||||...+.......    ....  ..+...|.+.             ....++++|||+.+||++|
T Consensus         4 ~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~-------------~~~~~v~~rPgv~efL~~l   70 (156)
T TIGR02250         4 EKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLG-------------TMWYLTKLRPFLHEFLKEA   70 (156)
T ss_pred             CCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcC-------------CeEEEEEECCCHHHHHHHH
Confidence            4899999999999999976544333211    0000  0111122221             1357899999999999999


Q ss_pred             hhcceEEEEccCchhhHHHHHHHhcCCC-ceeE-EEecCcccccCCccccccccc-cCCCCCcEEEEECCcccccCCCCC
Q 023259          166 SEFADLILFTAGLEGYARPLVDRIDGEN-LFSL-RLYRPSTTSTEYREHVKDLSC-LSKDLCRTLIVDNNPFSFLLQPLN  242 (285)
Q Consensus       166 s~~yeIvI~Ta~~~~YA~~Vl~~LDp~~-~f~~-~l~r~~c~~~k~~~~~KdL~~-Lgrdl~~vVIVDDs~~~~~~~p~N  242 (285)
                      ++.|+++|||++.+.||+++++.|||.+ +|.. +++|++|.    +.+.|||+. ++++++++|||||++.+|..||+|
T Consensus        71 ~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~----~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N  146 (156)
T TIGR02250        71 SKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESG----SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRN  146 (156)
T ss_pred             HhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCC----CCccccHHHHcCCCcccEEEEeCCHHHhhcCccC
Confidence            9999999999999999999999999996 7845 57799985    578999955 589999999999999999999999


Q ss_pred             eeeeCccC
Q 023259          243 GIPCIPFS  250 (285)
Q Consensus       243 gI~I~~F~  250 (285)
                      ||+|++|.
T Consensus       147 ~i~i~~~~  154 (156)
T TIGR02250       147 LIQIEPYN  154 (156)
T ss_pred             EEEeCCcc
Confidence            99999996

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=99.95  E-value=4.4e-28  Score=226.73  Aligned_cols=143  Identities=32%  Similarity=0.498  Sum_probs=129.8

Q ss_pred             ccCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhcc
Q 023259           90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFA  169 (285)
Q Consensus        90 ~~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~y  169 (285)
                      +.++++||||||.++|||..|+-                                  -.+|.+++|||++-||.+|+++|
T Consensus       185 y~Qp~yTLVleledvLVhpdws~----------------------------------~tGwRf~kRPgvD~FL~~~a~~y  230 (393)
T KOG2832|consen  185 YEQPPYTLVLELEDVLVHPDWSY----------------------------------KTGWRFKKRPGVDYFLGHLAKYY  230 (393)
T ss_pred             ccCCCceEEEEeeeeEeccchhh----------------------------------hcCceeccCchHHHHHHhhcccc
Confidence            56789999999999999954321                                  13467999999999999999999


Q ss_pred             eEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccCCCCCeeeeCcc
Q 023259          170 DLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       170 eIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~~F  249 (285)
                      ||||||+....||.++++.+||+++++++++|++|.+. ++.++|||++|+||+.+||+||-+++++.+||+|.|.+++|
T Consensus       231 EIVi~sse~gmt~~pl~d~lDP~g~IsYkLfr~~t~y~-~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W  309 (393)
T KOG2832|consen  231 EIVVYSSEQGMTVFPLLDALDPKGYISYKLFRGATKYE-EGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPW  309 (393)
T ss_pred             eEEEEecCCccchhhhHhhcCCcceEEEEEecCccccc-CccchhhhhhhccccceeEEEEccccccccCcccccccCcC
Confidence            99999999999999999999999999999999998876 58999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCc----------------cCcHHHHHhh
Q 023259          250 SAGQPHDNQ----------------KDVRPELYER  268 (285)
Q Consensus       250 ~~g~~~D~~----------------~DVR~vL~~~  268 (285)
                      . |+.+|++                +|||++|+..
T Consensus       310 ~-Gn~dDt~L~dL~~FL~~ia~~~~eDvR~vL~~y  343 (393)
T KOG2832|consen  310 S-GNDDDTSLFDLLAFLEYIAQQQVEDVRPVLQSY  343 (393)
T ss_pred             C-CCcccchhhhHHHHHHHHHHccHHHHHHHHHHh
Confidence            7 7778865                9999999643

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.94  E-value=1.3e-26  Score=195.11  Aligned_cols=147  Identities=40%  Similarity=0.551  Sum_probs=119.5

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhcceEE
Q 023259           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLI  172 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~yeIv  172 (285)
                      +|++|||||||||+|+...+..+.......         .       ..........+++.+|||+.|||++|++.|+++
T Consensus         1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~---------~-------~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~   64 (148)
T smart00577        1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFI---------V-------PVLIDGHPHGVYVKKRPGVDEFLKRASELFELV   64 (148)
T ss_pred             CCcEEEEeCCCCeECCCCCcCCCCCccceE---------E-------EEEeCCceEEEEEEECCCHHHHHHHHHhccEEE
Confidence            589999999999999865443221111011         0       111112235678999999999999999889999


Q ss_pred             EEccCchhhHHHHHHHhcCCC-ceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccCCCCCeeeeCccCC
Q 023259          173 LFTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSA  251 (285)
Q Consensus       173 I~Ta~~~~YA~~Vl~~LDp~~-~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~~F~~  251 (285)
                      |||++...|++.+++++++.+ +|..++++++|...+.. |.|+|+.+|++++++|+|||++..+..++.|||.|++|. 
T Consensus        65 I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~-  142 (148)
T smart00577       65 VFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWF-  142 (148)
T ss_pred             EEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcC-
Confidence            999999999999999999965 45889999999877654 999999999999999999999999999999999999998 


Q ss_pred             CCCCCC
Q 023259          252 GQPHDN  257 (285)
Q Consensus       252 g~~~D~  257 (285)
                      |+++|+
T Consensus       143 ~~~~d~  148 (148)
T smart00577      143 GDPDDT  148 (148)
T ss_pred             CCCCCC
Confidence            666664

>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=99.84  E-value=2.8e-21  Score=184.84  Aligned_cols=153  Identities=36%  Similarity=0.488  Sum_probs=126.3

Q ss_pred             CCcccccCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHH
Q 023259           85 DVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQ  164 (285)
Q Consensus        85 ~~~~~~~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~  164 (285)
                      +........+++|++|||+||+|+....  .   +..       .|..+     ....+  ....+||.+||||++||..
T Consensus       203 ~~~~~~~~~~k~L~l~lde~l~~S~~~~--~---~~~-------df~~~-----~e~~~--~~~~~~v~kRp~l~~fl~~  263 (390)
T COG5190         203 PPVSKSTSPKKTLVLDLDETLVHSSFRY--I---TLL-------DFLVK-----VEISL--LQHLVYVSKRPELDYFLGK  263 (390)
T ss_pred             chhhcCCCCccccccCCCccceeecccc--c---ccc-------chhhc-----ccccc--ceeEEEEcCChHHHHHHhh
Confidence            3344567789999999999999975321  0   000       12211     11222  2356899999999999999


Q ss_pred             hhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccCCCCCee
Q 023259          165 LSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGI  244 (285)
Q Consensus       165 ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI  244 (285)
                      +++.|++++||++.+.||++|++.|++.+.|.+++||.+|.... |.|+|||..+++++.++||||++|.+|.++|+|+|
T Consensus       264 ls~~~~l~~ft~s~~~y~~~v~d~l~~~k~~~~~lfr~sc~~~~-G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i  342 (390)
T COG5190         264 LSKIHELVYFTASVKRYADPVLDILDSDKVFSHRLFRESCVSYL-GVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAI  342 (390)
T ss_pred             hhhhEEEEEEecchhhhcchHHHhccccceeehhhhcccceecc-CchhhhHHhhccCCCceEEeeCChhhhhhCcccee
Confidence            99999999999999999999999999999999999999998774 66999999999999999999999999999999999


Q ss_pred             eeCccCCCCCCCCc
Q 023259          245 PCIPFSAGQPHDNQ  258 (285)
Q Consensus       245 ~I~~F~~g~~~D~~  258 (285)
                      ++++|. +++.|++
T Consensus       343 ~i~~W~-~d~~d~e  355 (390)
T COG5190         343 PIEKWI-SDEHDDE  355 (390)
T ss_pred             ccCccc-ccccchh
Confidence            999997 6666655

>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=99.70  E-value=4.8e-17  Score=163.52  Aligned_cols=143  Identities=29%  Similarity=0.321  Sum_probs=106.0

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhcc---ccc----ccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHh
Q 023259           93 QKLTVVLDLDETLVCAYETSSLPVTLRN---QAT----GAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQL  165 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s~~~s~lp~~~~~---~~~----~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~l  165 (285)
                      .++.||+|||.||+|+...+.+.++...   +..    ..++..|..       .  |.  ..-+||++|||+++||+++
T Consensus       145 ~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~-------~--~~--~~~~~vKlRP~~~efL~~~  213 (635)
T KOG0323|consen  145 KKLHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNP-------L--GH--DTEYLVKLRPFVHEFLKEA  213 (635)
T ss_pred             hcceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecc-------c--CC--CceEEEEeCccHHHHHHHH
Confidence            4479999999999998765555444321   110    011111110       0  11  1348899999999999999


Q ss_pred             hhcceEEEEccCchhhHHHHHHHhcCCC-ceeEE-EecCcccccCCccccccccccC-CCCCcEEEEECCcccccCCCCC
Q 023259          166 SEFADLILFTAGLEGYARPLVDRIDGEN-LFSLR-LYRPSTTSTEYREHVKDLSCLS-KDLCRTLIVDNNPFSFLLQPLN  242 (285)
Q Consensus       166 s~~yeIvI~Ta~~~~YA~~Vl~~LDp~~-~f~~~-l~r~~c~~~k~~~~~KdL~~Lg-rdl~~vVIVDDs~~~~~~~p~N  242 (285)
                      ++.|+|+|||+|.+.||..|++.|||.+ +|..| ++|++-    ...-.+||..++ +..+++|||||+..+|..++.|
T Consensus       214 sklfemhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde~----~~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~n  289 (635)
T KOG0323|consen  214 NKLFEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDES----PFFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRN  289 (635)
T ss_pred             HhhceeEEEeccchHHHHHHHHHhCCCCccccceEEEecCC----CcccccccccCCCCCCccEEEEeCccccccCCCcc
Confidence            9999999999999999999999999987 78655 556651    123456777664 5677899999999999999999


Q ss_pred             eeeeCccC
Q 023259          243 GIPCIPFS  250 (285)
Q Consensus       243 gI~I~~F~  250 (285)
                      .|.|.+|.
T Consensus       290 LI~i~~y~  297 (635)
T KOG0323|consen  290 LIQIAPYP  297 (635)
T ss_pred             eEEeeeee
Confidence            99999975

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=98.92  E-value=1.4e-09  Score=94.59  Aligned_cols=101  Identities=13%  Similarity=0.090  Sum_probs=78.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccC-chhhHHHHHHHhcCC---------CceeEEEecCcccccCCc-ccccccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAG-LEGYARPLVDRIDGE---------NLFSLRLYRPSTTSTEYR-EHVKDLSCL  219 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~-~~~YA~~Vl~~LDp~---------~~f~~~l~r~~c~~~k~~-~~~KdL~~L  219 (285)
                      +.++||+.++|+.|++. +.++|.|++ ...+++.+++.++..         .+|..++..+.....+.. ...+.+...
T Consensus        44 ~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~  123 (174)
T TIGR01685        44 VTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKV  123 (174)
T ss_pred             EEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhc
Confidence            77899999999999977 999999988 999999999999877         788888876653221111 122333332


Q ss_pred             ---CCCCCcEEEEECCcccccCCCCCeeeeCccCCC
Q 023259          220 ---SKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAG  252 (285)
Q Consensus       220 ---grdl~~vVIVDDs~~~~~~~p~NgI~I~~F~~g  252 (285)
                         +-+++++++|||++........+|+.+--...|
T Consensus       124 ~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g  159 (174)
T TIGR01685       124 DPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSG  159 (174)
T ss_pred             ccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCC
Confidence               578999999999999998888999887666434

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=98.85  E-value=8.4e-10  Score=96.53  Aligned_cols=96  Identities=17%  Similarity=0.114  Sum_probs=82.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|++|++. +.++|.|++...+++.+++.++..++|..+++.+++...|..  .+.+-++.++.+.+++++
T Consensus        74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~  153 (205)
T TIGR01454        74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVM  153 (205)
T ss_pred             cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEE
Confidence            66789999999999977 999999999999999999999999999998888776544432  566778888999999999


Q ss_pred             EECCcccccCCCCCeeeeC
Q 023259          229 VDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~  247 (285)
                      |+|++.-+.....+|+.+-
T Consensus       154 igD~~~Di~aA~~~Gi~~i  172 (205)
T TIGR01454       154 VGDAVTDLASARAAGTATV  172 (205)
T ss_pred             EcCCHHHHHHHHHcCCeEE
Confidence            9999988877888888754

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=98.84  E-value=1.2e-09  Score=100.28  Aligned_cols=99  Identities=17%  Similarity=0.199  Sum_probs=86.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|.|++...+++.+++.++...+|..++..+++...|..  .|.+-++++|.+++++|+
T Consensus       108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~  187 (260)
T PLN03243        108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIV  187 (260)
T ss_pred             cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEE
Confidence            56789999999999987 999999999999999999999988899999998887655543  678889999999999999


Q ss_pred             EECCcccccCCCCCeeeeCccC
Q 023259          229 VDNNPFSFLLQPLNGIPCIPFS  250 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~~F~  250 (285)
                      |+|+...+.....+|+.+--..
T Consensus       188 IgDs~~Di~aA~~aG~~~i~v~  209 (260)
T PLN03243        188 FGNSNSSVEAAHDGCMKCVAVA  209 (260)
T ss_pred             EcCCHHHHHHHHHcCCEEEEEe
Confidence            9999998888888887665443

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=98.83  E-value=1e-09  Score=98.33  Aligned_cols=94  Identities=16%  Similarity=0.045  Sum_probs=81.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|-|++...+++..++.++...+|+.++..++....|..  .|.+-++++|.+++++++
T Consensus        92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~  171 (224)
T PRK14988         92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLF  171 (224)
T ss_pred             CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence            56789999999999987 999999999999999999998888889998887766544443  577888999999999999


Q ss_pred             EECCcccccCCCCCeee
Q 023259          229 VDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~  245 (285)
                      |+|++........+|+.
T Consensus       172 igDs~~di~aA~~aG~~  188 (224)
T PRK14988        172 IDDSEPILDAAAQFGIR  188 (224)
T ss_pred             EcCCHHHHHHHHHcCCe
Confidence            99999988888888885

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=98.82  E-value=2.5e-09  Score=87.96  Aligned_cols=82  Identities=17%  Similarity=0.019  Sum_probs=66.4

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccC-chhhHHHHHHHhc-------CCCceeEEEecCcccccCCccccccccccC--C
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAG-LEGYARPLVDRID-------GENLFSLRLYRPSTTSTEYREHVKDLSCLS--K  221 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~-~~~YA~~Vl~~LD-------p~~~f~~~l~r~~c~~~k~~~~~KdL~~Lg--r  221 (285)
                      ...||+.++|+.|++. +.++|.|++ .+.++..+++..+       ..++|......+..  .+...+.+-++++|  .
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~--pkp~~~~~a~~~lg~~~  106 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWL--PKSPRLVEIALKLNGVL  106 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCC--cHHHHHHHHHHHhcCCC
Confidence            4689999999999976 999999999 9999999999887       45666666555432  23346778888889  9


Q ss_pred             CCCcEEEEECCcccc
Q 023259          222 DLCRTLIVDNNPFSF  236 (285)
Q Consensus       222 dl~~vVIVDDs~~~~  236 (285)
                      +++++++|||++...
T Consensus       107 ~p~~~l~igDs~~n~  121 (128)
T TIGR01681       107 KPKSILFVDDRPDNN  121 (128)
T ss_pred             CcceEEEECCCHhHH
Confidence            999999999998753

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=98.82  E-value=1.7e-09  Score=95.13  Aligned_cols=96  Identities=18%  Similarity=0.138  Sum_probs=82.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCC--ccccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~--~~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|.|++...+++.+++.++...+|..++..+.+...|.  ..+.+-++.++.+.+++++
T Consensus        81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~  160 (214)
T PRK13288         81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALM  160 (214)
T ss_pred             cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEE
Confidence            56789999999999976 99999999999999999999999999999998887654443  3567788888999999999


Q ss_pred             EECCcccccCCCCCeeeeC
Q 023259          229 VDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~  247 (285)
                      |+|++.-+.....+|+.+-
T Consensus       161 iGDs~~Di~aa~~aG~~~i  179 (214)
T PRK13288        161 VGDNHHDILAGKNAGTKTA  179 (214)
T ss_pred             ECCCHHHHHHHHHCCCeEE
Confidence            9999988887778887643

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=98.78  E-value=3.1e-09  Score=95.14  Aligned_cols=96  Identities=13%  Similarity=0.090  Sum_probs=80.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|-|++...++..+++.++..++|..++..+++...|..  .+.+-++++|.+++++++
T Consensus        94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~  173 (229)
T PRK13226         94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVY  173 (229)
T ss_pred             CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence            57899999999999987 899999999999999999999888888887777765544433  577888899999999999


Q ss_pred             EECCcccccCCCCCeeeeC
Q 023259          229 VDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~  247 (285)
                      |+|++.-.......|+.+-
T Consensus       174 IGDs~~Di~aA~~aG~~~i  192 (229)
T PRK13226        174 VGDDERDILAARAAGMPSV  192 (229)
T ss_pred             eCCCHHHHHHHHHCCCcEE
Confidence            9999988777777777653

>PRK11587 putative phosphatase; Provisional

Probab=98.78  E-value=3e-09  Score=94.25  Aligned_cols=98  Identities=13%  Similarity=0.099  Sum_probs=78.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|-|++...++..+++.... .++..++..+++...|..  .+.+-++.+|.+++++|+
T Consensus        82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~  160 (218)
T PRK11587         82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV  160 (218)
T ss_pred             ceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEE
Confidence            56799999999999877 99999999999888888877765 356667777665444433  678888999999999999


Q ss_pred             EECCcccccCCCCCeeeeCccC
Q 023259          229 VDNNPFSFLLQPLNGIPCIPFS  250 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~~F~  250 (285)
                      |+|++.........|+.+--+.
T Consensus       161 igDs~~di~aA~~aG~~~i~v~  182 (218)
T PRK11587        161 VEDAPAGVLSGLAAGCHVIAVN  182 (218)
T ss_pred             EecchhhhHHHHHCCCEEEEEC
Confidence            9999988887778887654443

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=98.75  E-value=1.6e-09  Score=93.17  Aligned_cols=93  Identities=22%  Similarity=0.252  Sum_probs=77.6

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccc----cCC--ccccccccccCCCCCc
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS----TEY--REHVKDLSCLSKDLCR  225 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~----~k~--~~~~KdL~~Lgrdl~~  225 (285)
                      +...||+.++|++|+  +.++|.|++....+..+++.++..++|+.++..++...    .|+  ..|.+-++.+|.++++
T Consensus        83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~  160 (184)
T TIGR01993        83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER  160 (184)
T ss_pred             CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence            456799999999998  68999999999999999999998889998888776543    133  3677888889999999


Q ss_pred             EEEEECCcccccCCCCCeeee
Q 023259          226 TLIVDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       226 vVIVDDs~~~~~~~p~NgI~I  246 (285)
                      +++|+|++........+|+..
T Consensus       161 ~l~vgD~~~di~aA~~~G~~~  181 (184)
T TIGR01993       161 AIFFDDSARNIAAAKALGMKT  181 (184)
T ss_pred             eEEEeCCHHHHHHHHHcCCEE
Confidence            999999998777777777653

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=98.73  E-value=5.8e-09  Score=100.76  Aligned_cols=99  Identities=13%  Similarity=0.132  Sum_probs=85.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.+||+.|.+. +.++|-|++...+++.+++.++..++|+.++..+++...|..  .|.+-++.+|.+++++|+
T Consensus       215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~  294 (381)
T PLN02575        215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIV  294 (381)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            45689999999999987 999999999999999999999999999999999887655443  678889999999999999


Q ss_pred             EECCcccccCCCCCeeeeCccC
Q 023259          229 VDNNPFSFLLQPLNGIPCIPFS  250 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~~F~  250 (285)
                      |+|+.........+|+.+--..
T Consensus       295 IGDS~~DIeAAk~AGm~~IgV~  316 (381)
T PLN02575        295 FGNSNQTVEAAHDARMKCVAVA  316 (381)
T ss_pred             EcCCHHHHHHHHHcCCEEEEEC
Confidence            9999998887777777655543

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=98.71  E-value=4.2e-08  Score=80.03  Aligned_cols=92  Identities=12%  Similarity=0.143  Sum_probs=68.6

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCc--------hhhHHHHHHHhcCCCceeEEEecCcccccCCcccccccccc-CC
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGL--------EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCL-SK  221 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~--------~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~L-gr  221 (285)
                      ....||+.++|++|++. +.++|.|++.        ..+++.+++.++..  +...+++..+...+...+.+-++.+ +.
T Consensus        24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~KP~~~~~~~~~~~~~~~  101 (132)
T TIGR01662        24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACPHCRKPKPGMFLEALKRFNEI  101 (132)
T ss_pred             heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECCCCCCCChHHHHHHHHHcCCC
Confidence            34689999999999977 9999999999        78889999998775  3333333322222223567778888 59


Q ss_pred             CCCcEEEEEC-CcccccCCCCCeee
Q 023259          222 DLCRTLIVDN-NPFSFLLQPLNGIP  245 (285)
Q Consensus       222 dl~~vVIVDD-s~~~~~~~p~NgI~  245 (285)
                      +.+++++|+| +.........+|+.
T Consensus       102 ~~~~~v~IGD~~~~Di~~A~~~Gi~  126 (132)
T TIGR01662       102 DPEESVYVGDQDLTDLQAAKRAGLA  126 (132)
T ss_pred             ChhheEEEcCCCcccHHHHHHCCCe
Confidence            9999999999 67777666666664

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=98.71  E-value=2.2e-09  Score=92.20  Aligned_cols=95  Identities=11%  Similarity=0.128  Sum_probs=80.1

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +..-|++ +.|+.+.+.+.++|-|++...+++.+++.++..++|+.++..+++...|..  .+.+-+++++.+.+++|+|
T Consensus        87 ~~~~~~~-e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~i  165 (188)
T PRK10725         87 VEPLPLI-EVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVF  165 (188)
T ss_pred             CCCccHH-HHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence            3455764 899999877999999999999999999999998999999998876555543  5778888899999999999


Q ss_pred             ECCcccccCCCCCeeeeC
Q 023259          230 DNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I~  247 (285)
                      +|++..+.....+|+.+-
T Consensus       166 gDs~~di~aA~~aG~~~i  183 (188)
T PRK10725        166 EDADFGIQAARAAGMDAV  183 (188)
T ss_pred             eccHhhHHHHHHCCCEEE
Confidence            999998888888887643

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=98.67  E-value=7.2e-09  Score=92.83  Aligned_cols=100  Identities=16%  Similarity=0.186  Sum_probs=90.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.+||+.|.+. ..+++-|++.+..++.+++.++...+|..+++.++....|..  .|.+-.++||.+++++|+
T Consensus        85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cvv  164 (221)
T COG0637          85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVV  164 (221)
T ss_pred             CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEE
Confidence            67899999999999988 999999999999999999999999999999998887666543  799999999999999999


Q ss_pred             EECCcccccCCCCCeeeeCccCC
Q 023259          229 VDNNPFSFLLQPLNGIPCIPFSA  251 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~~F~~  251 (285)
                      |||++.-.......|+.+--+.+
T Consensus       165 iEDs~~Gi~Aa~aAGm~vv~v~~  187 (221)
T COG0637         165 VEDSPAGIQAAKAAGMRVVGVPA  187 (221)
T ss_pred             EecchhHHHHHHHCCCEEEEecC
Confidence            99999998888888888877764

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=98.64  E-value=1.7e-08  Score=89.41  Aligned_cols=98  Identities=12%  Similarity=0.036  Sum_probs=83.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      ....||+.++|+.|++. +.++|.|++....++.+++.++..++|..++.++.....|..  .+..-++.+|.+++++++
T Consensus        91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  170 (222)
T PRK10826         91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVA  170 (222)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence            45789999999999977 999999999999999999999999999998888775444432  677888889999999999


Q ss_pred             EECCcccccCCCCCeeeeCcc
Q 023259          229 VDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~~F  249 (285)
                      |+|+..-.......|+.+--.
T Consensus       171 igDs~~Di~aA~~aG~~~i~v  191 (222)
T PRK10826        171 LEDSFNGMIAAKAARMRSIVV  191 (222)
T ss_pred             EcCChhhHHHHHHcCCEEEEe
Confidence            999999888777788765444

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=98.62  E-value=3e-08  Score=91.41  Aligned_cols=94  Identities=18%  Similarity=0.247  Sum_probs=78.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +..+||+.++|+.|++. +.++|.|++...+++.+++.++..++|..+++.+.+...|..  .+.+-++++|.+++++|+
T Consensus       100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~  179 (272)
T PRK13223        100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLF  179 (272)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEE
Confidence            45789999999999876 999999999999999999999888888887777665433332  456777788999999999


Q ss_pred             EECCcccccCCCCCeee
Q 023259          229 VDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~  245 (285)
                      |+|+..-......+|+.
T Consensus       180 IGD~~~Di~aA~~aGi~  196 (272)
T PRK13223        180 VGDSRSDVLAAKAAGVQ  196 (272)
T ss_pred             ECCCHHHHHHHHHCCCe
Confidence            99999888777778874

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=98.62  E-value=9.4e-09  Score=90.61  Aligned_cols=95  Identities=11%  Similarity=0.079  Sum_probs=79.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC--CceeEEEecCcccccCC--ccccccccccCCC-CCc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE--NLFSLRLYRPSTTSTEY--REHVKDLSCLSKD-LCR  225 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~--~~f~~~l~r~~c~~~k~--~~~~KdL~~Lgrd-l~~  225 (285)
                      ..+.||+.++|++|++. +.++|-|++...+++.+++.++..  .+|..++..++....|.  ..+.+-+++++.. +++
T Consensus        86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~  165 (220)
T TIGR03351        86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS  165 (220)
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence            46899999999999876 999999999999999999999887  78988888766433333  3567778888876 799


Q ss_pred             EEEEECCcccccCCCCCeeee
Q 023259          226 TLIVDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       226 vVIVDDs~~~~~~~p~NgI~I  246 (285)
                      +++|+|++.-.......|+.+
T Consensus       166 ~~~igD~~~Di~aa~~aG~~~  186 (220)
T TIGR03351       166 VAVAGDTPNDLEAGINAGAGA  186 (220)
T ss_pred             eEEeCCCHHHHHHHHHCCCCe
Confidence            999999998887777777765

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PLN02940 riboflavin kinase

Probab=98.60  E-value=7.1e-09  Score=100.22  Aligned_cols=96  Identities=11%  Similarity=0.162  Sum_probs=81.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHH-HhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVD-RIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTL  227 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~-~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vV  227 (285)
                      +...||+.++|++|++. +.++|-|++...+++.+++ ..+..++|+.++..+++...|..  .+.+-++.+|.+++++|
T Consensus        92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l  171 (382)
T PLN02940         92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCL  171 (382)
T ss_pred             CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEE
Confidence            45789999999999988 9999999999999999887 67777899999999887655543  67788888999999999


Q ss_pred             EEECCcccccCCCCCeeeeC
Q 023259          228 IVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       228 IVDDs~~~~~~~p~NgI~I~  247 (285)
                      +|+|+..........|+.+-
T Consensus       172 ~VGDs~~Di~aA~~aGi~~I  191 (382)
T PLN02940        172 VIEDSLPGVMAGKAAGMEVI  191 (382)
T ss_pred             EEeCCHHHHHHHHHcCCEEE
Confidence            99999998877777776543

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.60  E-value=2.6e-07  Score=86.38  Aligned_cols=126  Identities=18%  Similarity=0.119  Sum_probs=93.1

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeC-ccHHHHHHHhhhc-
Q 023259           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFER-PGLREFLKQLSEF-  168 (285)
Q Consensus        91 ~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~R-Pgl~eFL~~ls~~-  168 (285)
                      ...++.+||||||||+...+                                        -|..| ||+.++|++|++. 
T Consensus       125 ~~~~~~i~~D~D~TL~~~~~----------------------------------------~v~irdp~V~EtL~eLkekG  164 (303)
T PHA03398        125 WEIPHVIVFDLDSTLITDEE----------------------------------------PVRIRDPFVYDSLDELKERG  164 (303)
T ss_pred             eeeccEEEEecCCCccCCCC----------------------------------------ccccCChhHHHHHHHHHHCC
Confidence            34678999999999997411                                        04468 9999999999988 


Q ss_pred             ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCC---------------cccccccc---ccC----------
Q 023259          169 ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY---------------REHVKDLS---CLS----------  220 (285)
Q Consensus       169 yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~---------------~~~~KdL~---~Lg----------  220 (285)
                      +.++|+|++.+++++.+++.++..++|..++..++......               ..+..|..   .|.          
T Consensus       165 ikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL  244 (303)
T PHA03398        165 CVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYL  244 (303)
T ss_pred             CEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHH
Confidence            99999999999999999999999988887777666543220               12334444   222          


Q ss_pred             ----C-CCCcEEEEECCcccccCCCCCeeeeCccCCCCCCCCc
Q 023259          221 ----K-DLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQ  258 (285)
Q Consensus       221 ----r-dl~~vVIVDDs~~~~~~~p~NgI~I~~F~~g~~~D~~  258 (285)
                          . =.+.+.+|||-+.+= ..-+|-+.|+..- ...+|.+
T Consensus       245 ~~~gvn~~KtiTLVDDl~~Nn-~~YD~fv~v~rcp-~P~~DW~  285 (303)
T PHA03398        245 RKKGVNYFKTITLVDDLKSNN-YSYDYFVNVKRCP-EPVNDWD  285 (303)
T ss_pred             HHcCcceeccEEEeccCcccC-ccceeEEEeeeCC-CCcHHHH
Confidence                1 246688999988653 4668889998884 4456655

>COG4996 Predicted phosphatase [General function prediction only]

Probab=98.60  E-value=1.3e-07  Score=78.42  Aligned_cols=122  Identities=21%  Similarity=0.160  Sum_probs=89.8

Q ss_pred             EEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceEEEE
Q 023259           96 TVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADLILF  174 (285)
Q Consensus        96 tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-yeIvI~  174 (285)
                      .+|||+|+||++....|++.+.++--+             ...+...     .+.-|.++|++.+||+.++.- |-+..+
T Consensus         2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs-------------~n~i~Ds-----~G~ev~L~~~v~~~l~warnsG~i~~~~   63 (164)
T COG4996           2 AIVFDADKTLWDHHNISSLEPPFRRVS-------------SNTIEDS-----KGREVHLFPDVKETLKWARNSGYILGLA   63 (164)
T ss_pred             cEEEeCCCcccccccchhcCCcceecC-------------ccceecC-----CCeEEEEcHHHHHHHHHHHhCCcEEEEe
Confidence            589999999998777777665543111             1111111     123489999999999999988 999999


Q ss_pred             ccCchhhHHHHHHHhcCCCceeEEEecCcccccCCcccccccccc------CCCCCcEEEEECCccccc
Q 023259          175 TAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCL------SKDLCRTLIVDNNPFSFL  237 (285)
Q Consensus       175 Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~L------grdl~~vVIVDDs~~~~~  237 (285)
                      |.+.+.-|-++++.+|...+|.+.+...+-.  |.....+-|..+      ...++++|.+||+...+.
T Consensus        64 sWN~~~kA~~aLral~~~~yFhy~ViePhP~--K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~  130 (164)
T COG4996          64 SWNFEDKAIKALRALDLLQYFHYIVIEPHPY--KFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFG  130 (164)
T ss_pred             ecCchHHHHHHHHHhchhhhEEEEEecCCCh--hHHHHHHHHHHHHHhhccccCcceEEEEecccccHH
Confidence            9999999999999999999999888876621  222333334433      347899999999987764

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=98.59  E-value=1.8e-08  Score=93.24  Aligned_cols=95  Identities=14%  Similarity=0.113  Sum_probs=77.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVD  230 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVD  230 (285)
                      +...||+.++|++|++. +.++|.|++...+++.+++.++..++|..++..+... .+...+.+-+++++.+.+++++|+
T Consensus       141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~-~k~~~~~~~l~~~~~~p~~~l~IG  219 (273)
T PRK13225        141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL-SKRRALSQLVAREGWQPAAVMYVG  219 (273)
T ss_pred             CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC-CCHHHHHHHHHHhCcChhHEEEEC
Confidence            45679999999999977 9999999999999999999999988998877655432 222345566677788899999999


Q ss_pred             CCcccccCCCCCeeeeC
Q 023259          231 NNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       231 Ds~~~~~~~p~NgI~I~  247 (285)
                      |++.-......+|+.+-
T Consensus       220 Ds~~Di~aA~~AG~~~I  236 (273)
T PRK13225        220 DETRDVEAARQVGLIAV  236 (273)
T ss_pred             CCHHHHHHHHHCCCeEE
Confidence            99988777777777643

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.59  E-value=3.6e-08  Score=77.94  Aligned_cols=89  Identities=19%  Similarity=0.186  Sum_probs=65.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCccccc----------------CC--ccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTST----------------EY--REH  212 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~----------------k~--~~~  212 (285)
                      +..+|++.++|++|.+. +.++|.|++...+++.+++.++....+..++..+.....                +.  ..+
T Consensus        23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (139)
T cd01427          23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKL  102 (139)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHHH
Confidence            55799999999999998 999999999999999999998776556655554433211                11  123


Q ss_pred             cccccccCCCCCcEEEEECCcccccCCC
Q 023259          213 VKDLSCLSKDLCRTLIVDNNPFSFLLQP  240 (285)
Q Consensus       213 ~KdL~~Lgrdl~~vVIVDDs~~~~~~~p  240 (285)
                      .+-++.++.+.+.+++|+|+........
T Consensus       103 ~~~~~~~~~~~~~~~~igD~~~d~~~~~  130 (139)
T cd01427         103 LAALKLLGVDPEEVLMVGDSLNDIEMAK  130 (139)
T ss_pred             HHHHHHcCCChhhEEEeCCCHHHHHHHH
Confidence            3444555667899999999997654433

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=98.58  E-value=1.4e-07  Score=81.23  Aligned_cols=93  Identities=13%  Similarity=0.094  Sum_probs=66.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCch----hhH-----------HHHHHHhcCCCceeEEEecC-----------cc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLE----GYA-----------RPLVDRIDGENLFSLRLYRP-----------ST  204 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~----~YA-----------~~Vl~~LDp~~~f~~~l~r~-----------~c  204 (285)
                      +.+-||+.++|++|++. |.++|.|++..    .++           ..++..+...  |...+++.           .|
T Consensus        25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~  102 (176)
T TIGR00213        25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVC  102 (176)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCC
Confidence            45679999999999987 99999999985    233           3334333322  45555432           23


Q ss_pred             cccCC--ccccccccccCCCCCcEEEEECCcccccCCCCCeeee
Q 023259          205 TSTEY--REHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       205 ~~~k~--~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I  246 (285)
                      ...|.  ..+.+-+++++.+++++++|+|+..-......+|+.+
T Consensus       103 ~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~  146 (176)
T TIGR00213       103 DCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKT  146 (176)
T ss_pred             CCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcE
Confidence            22332  3677788889999999999999998887777788753

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=98.55  E-value=8.4e-08  Score=80.31  Aligned_cols=92  Identities=17%  Similarity=0.161  Sum_probs=64.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCch---------------hhHHHHHHHhcCCCceeEEEec-----CcccccC--
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLE---------------GYARPLVDRIDGENLFSLRLYR-----PSTTSTE--  208 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~---------------~YA~~Vl~~LDp~~~f~~~l~r-----~~c~~~k--  208 (285)
                      +...||+.++|+.|++. |.++|.|++..               .++..+++.++..  +...++.     +.....|  
T Consensus        26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~~~~~KP~  103 (147)
T TIGR01656        26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVA--VDGVLFCPHHPADNCSCRKPK  103 (147)
T ss_pred             eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCc--eeEEEECCCCCCCCCCCCCCC
Confidence            35789999999999977 99999999874               4566667776654  1122222     2211122  


Q ss_pred             CccccccccccCCCCCcEEEEECCcccccCCCCCeee
Q 023259          209 YREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       209 ~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~  245 (285)
                      ...+.+-++.++.+++++++|+|+..-.......|+.
T Consensus       104 ~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~  140 (147)
T TIGR01656       104 PGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA  140 (147)
T ss_pred             HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence            2356677778899999999999998877666666664

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=98.53  E-value=4.6e-08  Score=86.06  Aligned_cols=94  Identities=19%  Similarity=0.191  Sum_probs=76.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCC--ccccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~--~~~~KdL~~Lgrdl~~vVI  228 (285)
                      ...+||+.++|+.+++. +.++|.|++...+++.+++.++...+|...+..+.+...+.  ..+.+-++.++.+.+++++
T Consensus        92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~  171 (226)
T PRK13222         92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLF  171 (226)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEE
Confidence            56899999999999976 99999999999999999999998888887776665443332  2466777888999999999


Q ss_pred             EECCcccccCCCCCeee
Q 023259          229 VDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~  245 (285)
                      |+|+..........|+.
T Consensus       172 igD~~~Di~~a~~~g~~  188 (226)
T PRK13222        172 VGDSRNDIQAARAAGCP  188 (226)
T ss_pred             ECCCHHHHHHHHHCCCc
Confidence            99999877766666653

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=98.53  E-value=1e-08  Score=90.49  Aligned_cols=96  Identities=8%  Similarity=0.083  Sum_probs=78.8

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCcee-EEEecCcccccCC--ccccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFS-LRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~-~~l~r~~c~~~k~--~~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|.  +.++|.|++...+++.++++.+...+|. .+++.++....|.  ..|.+-++++|.+++++|+
T Consensus        87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~  164 (221)
T PRK10563         87 LEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCIL  164 (221)
T ss_pred             CCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence            567899999999994  8999999999999999999999988885 5666655544443  2677888889999999999


Q ss_pred             EECCcccccCCCCCeeeeCcc
Q 023259          229 VDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~~F  249 (285)
                      |+|++.........|+.+--+
T Consensus       165 igDs~~di~aA~~aG~~~i~~  185 (221)
T PRK10563        165 VDDSSAGAQSGIAAGMEVFYF  185 (221)
T ss_pred             EeCcHhhHHHHHHCCCEEEEE
Confidence            999999888777788766433

>TIGR01684 viral_ppase viral phosphatase

Probab=98.49  E-value=3.9e-07  Score=85.09  Aligned_cols=125  Identities=17%  Similarity=0.116  Sum_probs=92.5

Q ss_pred             CCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeC-ccHHHHHHHhhhc-c
Q 023259           92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFER-PGLREFLKQLSEF-A  169 (285)
Q Consensus        92 ~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~R-Pgl~eFL~~ls~~-y  169 (285)
                      ..++.+||||||||+...+                                        -|..| ||+.+.|++|.+. +
T Consensus       124 ~~~kvIvFDLDgTLi~~~~----------------------------------------~v~irdPgV~EaL~~LkekGi  163 (301)
T TIGR01684       124 EPPHVVVFDLDSTLITDEE----------------------------------------PVRIRDPRIYDSLTELKKRGC  163 (301)
T ss_pred             ccceEEEEecCCCCcCCCC----------------------------------------ccccCCHHHHHHHHHHHHCCC
Confidence            3567999999999996311                                        04468 9999999999998 9


Q ss_pred             eEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc---------------ccccccc---cc------------
Q 023259          170 DLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR---------------EHVKDLS---CL------------  219 (285)
Q Consensus       170 eIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~---------------~~~KdL~---~L------------  219 (285)
                      .++|+|++.+.++..+++.++..++|..++..++....+..               .+..|..   .|            
T Consensus       164 kLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL~  243 (301)
T TIGR01684       164 ILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYLY  243 (301)
T ss_pred             EEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHHH
Confidence            99999999999999999999999999888877665433211               1233442   22            


Q ss_pred             --CC-CCCcEEEEECCcccccCCCCCeeeeCccCCCCCCCCc
Q 023259          220 --SK-DLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQ  258 (285)
Q Consensus       220 --gr-dl~~vVIVDDs~~~~~~~p~NgI~I~~F~~g~~~D~~  258 (285)
                        |. =.+.+.+|||-+.+= ..-+|-+.|+..- ...+|.+
T Consensus       244 ~~gvn~~KtitLVDDl~~Nn-~~YD~fv~v~rcp-~P~~DW~  283 (301)
T TIGR01684       244 DLGVNYFKSITLVDDLADNN-FNYDYFVNVSRCP-VPVNDWD  283 (301)
T ss_pred             HcCCceeeeEEEeccCcccC-ccceeEEEeeeCC-CCchHHH
Confidence              22 246678999988653 4668889998884 5556665

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=98.45  E-value=5.2e-07  Score=77.81  Aligned_cols=92  Identities=14%  Similarity=0.091  Sum_probs=65.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCch---------------hhHHHHHHHhcCCCceeEEEecCc-----ccccCC-
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLE---------------GYARPLVDRIDGENLFSLRLYRPS-----TTSTEY-  209 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~---------------~YA~~Vl~~LDp~~~f~~~l~r~~-----c~~~k~-  209 (285)
                      +...||+.++|++|++. +.++|.|++..               .+...+++.++.  .|..+++...     +...|. 
T Consensus        28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP~  105 (181)
T PRK08942         28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKPK  105 (181)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCCC
Confidence            45789999999999987 99999999873               233334444433  3666665432     222332 


Q ss_pred             -ccccccccccCCCCCcEEEEECCcccccCCCCCeee
Q 023259          210 -REHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       210 -~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~  245 (285)
                       ..+.+-++.+|.+++++++|+|++.-.......|+.
T Consensus       106 p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~  142 (181)
T PRK08942        106 PGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT  142 (181)
T ss_pred             HHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence             256788888999999999999999877766666654

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=98.44  E-value=4.2e-07  Score=77.88  Aligned_cols=98  Identities=13%  Similarity=0.063  Sum_probs=75.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccC---------------chhhHHHHHHHhcCCCceeEEEec-----CcccccCCc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAG---------------LEGYARPLVDRIDGENLFSLRLYR-----PSTTSTEYR  210 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~---------------~~~YA~~Vl~~LDp~~~f~~~l~r-----~~c~~~k~~  210 (285)
                      +..-||+.++|++|.+. |.++|.|+.               ...++..+++.++..  |..++++     +++...|..
T Consensus        28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~  105 (161)
T TIGR01261        28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPK  105 (161)
T ss_pred             eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCC
Confidence            56789999999999987 999999996               356888888888886  7666654     454444432


Q ss_pred             --cccccccccCCCCCcEEEEECCcccccCCCCCeeeeCccCC
Q 023259          211 --EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSA  251 (285)
Q Consensus       211 --~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~~F~~  251 (285)
                        .+..-++.++.+.+++++|.|+..-......+|+.+--+..
T Consensus       106 ~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~  148 (161)
T TIGR01261       106 IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDE  148 (161)
T ss_pred             HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEECh
Confidence              45566667788999999999998877777888887766653

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01686 FkbH FkbH-like domain

Probab=98.44  E-value=3.2e-07  Score=86.46  Aligned_cols=81  Identities=22%  Similarity=0.126  Sum_probs=65.5

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHH----hcCCCceeEEEecCcccccCCccccccccccCCCCCcEEE
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDR----IDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~----LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVI  228 (285)
                      ..||+.++|+.|++. +.++|.|++.+..|..+++.    +....+|......   ...+.....+-++.+|.+++.+|+
T Consensus        32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~---~~pk~~~i~~~~~~l~i~~~~~vf  108 (320)
T TIGR01686        32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN---WGPKSESLRKIAKKLNLGTDSFLF  108 (320)
T ss_pred             cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe---cCchHHHHHHHHHHhCCCcCcEEE
Confidence            478999999999988 99999999999999999998    7776777665332   123334666777889999999999


Q ss_pred             EECCccccc
Q 023259          229 VDNNPFSFL  237 (285)
Q Consensus       229 VDDs~~~~~  237 (285)
                      |||++....
T Consensus       109 idD~~~d~~  117 (320)
T TIGR01686       109 IDDNPAERA  117 (320)
T ss_pred             ECCCHHHHH
Confidence            999998654

The C-terminal portion of this domain is unique to this family (by BLAST).

>PHA02597 30

Probab=98.42  E-value=3.7e-08  Score=85.59  Aligned_cols=98  Identities=15%  Similarity=0.080  Sum_probs=73.9

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCC----ceeEEEecCcccccCCccccccccccCCCCCcEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN----LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTL  227 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~----~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vV  227 (285)
                      +...||+.++|+.|++.+.+++-|++.......+++.+...+    +|+.++..+.+. .+...+.+-++++|  ++.+|
T Consensus        73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~-~kp~~~~~a~~~~~--~~~~v  149 (197)
T PHA02597         73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDE-SKEKLFIKAKEKYG--DRVVC  149 (197)
T ss_pred             ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCc-ccHHHHHHHHHHhC--CCcEE
Confidence            568999999999999888887778776666555666665443    556677766653 23446667777888  68899


Q ss_pred             EEECCcccccCCCCC--eeeeCccCCC
Q 023259          228 IVDNNPFSFLLQPLN--GIPCIPFSAG  252 (285)
Q Consensus       228 IVDDs~~~~~~~p~N--gI~I~~F~~g  252 (285)
                      +|||+.........+  ||.+--+..|
T Consensus       150 ~vgDs~~di~aA~~a~~Gi~~i~~~~~  176 (197)
T PHA02597        150 FVDDLAHNLDAAHEALSQLPVIHMLRG  176 (197)
T ss_pred             EeCCCHHHHHHHHHHHcCCcEEEecch
Confidence            999999999888888  9977766544

2 hypothetical protein; Provisional

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=98.40  E-value=8.3e-08  Score=79.85  Aligned_cols=82  Identities=20%  Similarity=0.137  Sum_probs=66.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      ....||+.++|+.|.+. +.++|.|++.+..+..+++.+ ...+|..++..+++. .|..  .+.+-+++++.+. ++++
T Consensus        63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~  139 (154)
T TIGR01549        63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLH  139 (154)
T ss_pred             heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEE
Confidence            44569999999999876 999999999999999999996 556788777777665 4433  5677788888888 9999


Q ss_pred             EECCcccc
Q 023259          229 VDNNPFSF  236 (285)
Q Consensus       229 VDDs~~~~  236 (285)
                      |.|++.-.
T Consensus       140 iGDs~~Di  147 (154)
T TIGR01549       140 VGDNLNDI  147 (154)
T ss_pred             EeCCHHHH
Confidence            99997544

HAD subfamilies caused by an overly broad single model.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=98.38  E-value=4e-07  Score=80.16  Aligned_cols=97  Identities=16%  Similarity=0.180  Sum_probs=72.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecC-----------cccc-cCCccccccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRP-----------STTS-TEYREHVKDLSC  218 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~-----------~c~~-~k~~~~~KdL~~  218 (285)
                      +..+||+.+||+.|.+. +.++|.|++...+++.+++.++...+|...+..+           .+.. .+...+.+-++.
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~  163 (219)
T TIGR00338        84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRK  163 (219)
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHH
Confidence            56899999999999987 9999999999999999999998777665433211           1111 122244555667


Q ss_pred             cCCCCCcEEEEECCcccccCCCCCeeeeCcc
Q 023259          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       219 Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~~F  249 (285)
                      ++.+.+++++|+|+..-.......|+.+ .|
T Consensus       164 ~~~~~~~~i~iGDs~~Di~aa~~ag~~i-~~  193 (219)
T TIGR00338       164 EGISPENTVAVGDGANDLSMIKAAGLGI-AF  193 (219)
T ss_pred             cCCCHHHEEEEECCHHHHHHHHhCCCeE-Ee
Confidence            7888999999999998877666667766 35

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=98.34  E-value=1.3e-06  Score=75.73  Aligned_cols=81  Identities=20%  Similarity=0.295  Sum_probs=52.7

Q ss_pred             EEeeCccHHHHHHHhhhc-ceEEEEcc-CchhhHHHHHHHhcCC----------CceeEE-EecCcccccCCccccccc-
Q 023259          151 TVFERPGLREFLKQLSEF-ADLILFTA-GLEGYARPLVDRIDGE----------NLFSLR-LYRPSTTSTEYREHVKDL-  216 (285)
Q Consensus       151 ~V~~RPgl~eFL~~ls~~-yeIvI~Ta-~~~~YA~~Vl~~LDp~----------~~f~~~-l~r~~c~~~k~~~~~KdL-  216 (285)
                      -+.+-|++.+.|+.|++. .+|++.|. ..++.|+++|+.++..          .+|.+. +|..+    | ..+.+.| 
T Consensus        43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gs----K-~~Hf~~i~  117 (169)
T PF12689_consen   43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPGS----K-TTHFRRIH  117 (169)
T ss_dssp             EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS-----H-HHHHHHHH
T ss_pred             EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecCc----h-HHHHHHHH
Confidence            388999999999999987 99999995 5789999999999888          667654 33321    2 2334444 


Q ss_pred             cccCCCCCcEEEEECCcccc
Q 023259          217 SCLSKDLCRTLIVDNNPFSF  236 (285)
Q Consensus       217 ~~Lgrdl~~vVIVDDs~~~~  236 (285)
                      +..|.+.++++++||...+.
T Consensus       118 ~~tgI~y~eMlFFDDe~~N~  137 (169)
T PF12689_consen  118 RKTGIPYEEMLFFDDESRNI  137 (169)
T ss_dssp             HHH---GGGEEEEES-HHHH
T ss_pred             HhcCCChhHEEEecCchhcc
Confidence            45789999999999988764

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=98.32  E-value=8.4e-07  Score=76.48  Aligned_cols=95  Identities=14%  Similarity=0.148  Sum_probs=69.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc------------cccccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR------------EHVKDLSC  218 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~------------~~~KdL~~  218 (285)
                      +..+||+.++|+.|.+. +.++|.|++...+++.+++.++...+|...+..++....+..            .+.+-++.
T Consensus        79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~  158 (201)
T TIGR01491        79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKRE  158 (201)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHH
Confidence            56899999999999977 999999999999999999999877777655543321111111            11122345


Q ss_pred             cCCCCCcEEEEECCcccccCCCCCeeee
Q 023259          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       219 Lgrdl~~vVIVDDs~~~~~~~p~NgI~I  246 (285)
                      ++.+.+++++|.|+..-.......|+.+
T Consensus       159 ~~~~~~~~i~iGDs~~D~~~a~~ag~~~  186 (201)
T TIGR01491       159 LNPSLTETVAVGDSKNDLPMFEVADISI  186 (201)
T ss_pred             hCCCHHHEEEEcCCHhHHHHHHhcCCeE
Confidence            6778899999999997766655566654

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=98.29  E-value=9.8e-07  Score=81.62  Aligned_cols=131  Identities=15%  Similarity=0.100  Sum_probs=95.9

Q ss_pred             ccCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-
Q 023259           90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-  168 (285)
Q Consensus        90 ~~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-  168 (285)
                      ...+++.+++|+||||......+.                |+..              ...-....||+.++|+.|.+. 
T Consensus       154 ~~~~~~~~~~D~dgtl~~~~~~~~----------------~~~~--------------~~~~~~~~~~~~~~l~~l~~~g  203 (300)
T PHA02530        154 DPGLPKAVIFDIDGTLAKMGGRSP----------------YDWT--------------KVKEDKPNPMVVELVKMYKAAG  203 (300)
T ss_pred             CCCCCCEEEEECCCcCcCCCCCCc----------------cchh--------------hcccCCCChhHHHHHHHHHhCC
Confidence            344678999999999997532111                0000              000134699999999999987 


Q ss_pred             ceEEEEccCchhhHHHHHHHhcCCC-ceeEEEecCc-------ccccCCc--cccccccccCC-CCCcEEEEECCccccc
Q 023259          169 ADLILFTAGLEGYARPLVDRIDGEN-LFSLRLYRPS-------TTSTEYR--EHVKDLSCLSK-DLCRTLIVDNNPFSFL  237 (285)
Q Consensus       169 yeIvI~Ta~~~~YA~~Vl~~LDp~~-~f~~~l~r~~-------c~~~k~~--~~~KdL~~Lgr-dl~~vVIVDDs~~~~~  237 (285)
                      +.++|.|+.....++.+++.++..+ +|..++..+.       +...+..  ...+.|..++. +.+.++.|||++....
T Consensus       204 ~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~  283 (300)
T PHA02530        204 YEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVD  283 (300)
T ss_pred             CEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHH
Confidence            9999999999999999999999987 7877766652       2222222  34566676777 6799999999999999


Q ss_pred             CCCCCeeeeCccC
Q 023259          238 LQPLNGIPCIPFS  250 (285)
Q Consensus       238 ~~p~NgI~I~~F~  250 (285)
                      ....+||++--..
T Consensus       284 ~a~~~Gi~~i~v~  296 (300)
T PHA02530        284 MWRRIGLECWQVA  296 (300)
T ss_pred             HHHHhCCeEEEec
Confidence            8899998765443

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.27  E-value=7.6e-07  Score=96.21  Aligned_cols=97  Identities=9%  Similarity=0.096  Sum_probs=83.4

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC-CceeEEEecCcccccCC--ccccccccccCCCCCcEEEE
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE-NLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~-~~f~~~l~r~~c~~~k~--~~~~KdL~~Lgrdl~~vVIV  229 (285)
                      ..||+.++|++|++. +.++|.|++...+++.+++.++.. .+|..++..+++...|.  ..|.+-++.++.+++++|+|
T Consensus       162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I  241 (1057)
T PLN02919        162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI  241 (1057)
T ss_pred             cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence            579999999999987 999999999999999999999875 67999998888765544  36788889999999999999


Q ss_pred             ECCcccccCCCCCeeeeCccC
Q 023259          230 DNNPFSFLLQPLNGIPCIPFS  250 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I~~F~  250 (285)
                      +|++..+......|+.+--..
T Consensus       242 gDs~~Di~AA~~aGm~~I~v~  262 (1057)
T PLN02919        242 EDALAGVQAARAAGMRCIAVT  262 (1057)
T ss_pred             cCCHHHHHHHHHcCCEEEEEC
Confidence            999998888888887665554

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=98.26  E-value=3.3e-06  Score=72.58  Aligned_cols=90  Identities=10%  Similarity=0.047  Sum_probs=62.4

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchh------------hHHHHHHHhcCCCceeEEEecCcccccCC--ccccccccc
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEG------------YARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSC  218 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~------------YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~--~~~~KdL~~  218 (285)
                      .-||+.+.|+.|.+. |.++|.|++...            +++.+++.++...  ...+..+.....|.  +.+..-++.
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~~  120 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAGLYRKPMTGMWEYLQSQ  120 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCCCCCCCccHHHHHHHHH
Confidence            459999999999876 999999998763            5677888887642  33444433222232  245555667


Q ss_pred             cC--CCCCcEEEEECCcc--------cccCCCCCeee
Q 023259          219 LS--KDLCRTLIVDNNPF--------SFLLQPLNGIP  245 (285)
Q Consensus       219 Lg--rdl~~vVIVDDs~~--------~~~~~p~NgI~  245 (285)
                      +|  .+++++++|.|++.        -......+|+.
T Consensus       121 ~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~  157 (166)
T TIGR01664       121 YNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE  157 (166)
T ss_pred             cCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence            77  78999999999972        44455566664

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=98.22  E-value=9.5e-07  Score=78.72  Aligned_cols=95  Identities=19%  Similarity=0.170  Sum_probs=80.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      ...-||+.+.|..+++. |.++|.|+.....++.+++.++...+|..++..+.+...|..  ....-++.+|.+.+++|.
T Consensus        88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~  167 (220)
T COG0546          88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALM  167 (220)
T ss_pred             CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEE
Confidence            35789999999999988 999999999999999999999999999988885555544433  456777888888779999


Q ss_pred             EECCcccccCCCCCeeee
Q 023259          229 VDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I  246 (285)
                      |=|+..-......+|+..
T Consensus       168 VGDs~~Di~aA~~Ag~~~  185 (220)
T COG0546         168 VGDSLNDILAAKAAGVPA  185 (220)
T ss_pred             ECCCHHHHHHHHHcCCCE
Confidence            999999988888777553

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=98.20  E-value=9.6e-07  Score=73.16  Aligned_cols=95  Identities=19%  Similarity=0.253  Sum_probs=80.8

Q ss_pred             EEeeCccHHHHHHHhh-hcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEE
Q 023259          151 TVFERPGLREFLKQLS-EFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTL  227 (285)
Q Consensus       151 ~V~~RPgl~eFL~~ls-~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vV  227 (285)
                      .....||+.++|+.++ +.+.++|.|++....++.+++.++...+|..+++.+++...|..  .|.+-++.++.+++++|
T Consensus        75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~  154 (176)
T PF13419_consen   75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEIL  154 (176)
T ss_dssp             GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEE
T ss_pred             ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEE
Confidence            4789999999999999 44999999999999999999999988899999988877665553  57788888899999999


Q ss_pred             EEECCcccccCCCCCeee
Q 023259          228 IVDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       228 IVDDs~~~~~~~p~NgI~  245 (285)
                      +|||++.........|+.
T Consensus       155 ~vgD~~~d~~~A~~~G~~  172 (176)
T PF13419_consen  155 FVGDSPSDVEAAKEAGIK  172 (176)
T ss_dssp             EEESSHHHHHHHHHTTSE
T ss_pred             EEeCCHHHHHHHHHcCCe
Confidence            999999776655555553

...

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=98.15  E-value=1.8e-06  Score=73.02  Aligned_cols=93  Identities=19%  Similarity=0.237  Sum_probs=76.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|.|++.... ..++.+++..++|..+++.+++...|..  .|.+-++.++.+++++|+
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~  162 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLF  162 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence            46789999999999986 9999999999998 7777778888889998887776555543  567778888999999999


Q ss_pred             EECCcccccCCCCCeee
Q 023259          229 VDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~  245 (285)
                      |||++.........|+.
T Consensus       163 vgD~~~di~aA~~~G~~  179 (183)
T TIGR01509       163 VDDSPAGIEAAKAAGMH  179 (183)
T ss_pred             EcCCHHHHHHHHHcCCE
Confidence            99999877666666664

HAD subfamilies caused by an overly broad single model.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=98.14  E-value=2.1e-06  Score=78.18  Aligned_cols=89  Identities=8%  Similarity=0.079  Sum_probs=63.6

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccC----chhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEE
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAG----LEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTL  227 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~----~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vV  227 (285)
                      ...|++.+||+++.+. +.++|-|+.    ...+++.+++.++..++|..++..+.....+..   |. ..+. ..+-+|
T Consensus       114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~---~~-~~l~-~~~i~i  188 (237)
T TIGR01672       114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYT---KT-QWIQ-DKNIRI  188 (237)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCC---HH-HHHH-hCCCeE
Confidence            3455599999999988 999999998    667999999999988888777766654322221   11 1121 233379


Q ss_pred             EEECCcccccCCCCCeeee
Q 023259          228 IVDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       228 IVDDs~~~~~~~p~NgI~I  246 (285)
                      .|-|+..-+.....+|+.+
T Consensus       189 ~vGDs~~DI~aAk~AGi~~  207 (237)
T TIGR01672       189 HYGDSDNDITAAKEAGARG  207 (237)
T ss_pred             EEeCCHHHHHHHHHCCCCE
Confidence            9999998887776777653

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=98.12  E-value=2e-06  Score=78.06  Aligned_cols=98  Identities=12%  Similarity=0.140  Sum_probs=85.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|++|++. +.++|-|++...+++.++++++..++|+.++..+++...|..  .+.+-+++++.+++++++
T Consensus       107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~  186 (248)
T PLN02770        107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFV  186 (248)
T ss_pred             CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEE
Confidence            56789999999999877 999999999999999999999999999999998887655543  678889999999999999


Q ss_pred             EECCcccccCCCCCeeeeCcc
Q 023259          229 VDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~~F  249 (285)
                      |+|++.-......+|+.+--.
T Consensus       187 vgDs~~Di~aA~~aGi~~i~v  207 (248)
T PLN02770        187 FEDSVSGIKAGVAAGMPVVGL  207 (248)
T ss_pred             EcCCHHHHHHHHHCCCEEEEE
Confidence            999999888888888865544

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=98.12  E-value=2.1e-06  Score=75.43  Aligned_cols=95  Identities=17%  Similarity=0.142  Sum_probs=80.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|++|++. +.++|.|++...++...++.++...+|..++..++....|+.  .|.+-++++|.+.+++|+
T Consensus        93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~  172 (221)
T TIGR02253        93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVM  172 (221)
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEEE
Confidence            57899999999999988 999999999999999999999998999999888876655543  677888999999999999


Q ss_pred             EECCc-ccccCCCCCeeee
Q 023259          229 VDNNP-FSFLLQPLNGIPC  246 (285)
Q Consensus       229 VDDs~-~~~~~~p~NgI~I  246 (285)
                      |+|++ .-+......|+.+
T Consensus       173 igDs~~~di~~A~~aG~~~  191 (221)
T TIGR02253       173 VGDRLDKDIKGAKNLGMKT  191 (221)
T ss_pred             ECCChHHHHHHHHHCCCEE
Confidence            99998 4555555566543

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK06769 hypothetical protein; Validated

Probab=98.12  E-value=3e-06  Score=73.06  Aligned_cols=95  Identities=12%  Similarity=0.039  Sum_probs=62.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhh-----HHHHHHHhcCCCceeEEEe-----cCcccccCC--ccccccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGY-----ARPLVDRIDGENLFSLRLY-----RPSTTSTEY--REHVKDLSC  218 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~Y-----A~~Vl~~LDp~~~f~~~l~-----r~~c~~~k~--~~~~KdL~~  218 (285)
                      +..-||+.++|++|++. |.++|.|++....     .......+...+ |...+.     .+.+...|.  ..+.+-+++
T Consensus        27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~  105 (173)
T PRK06769         27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFG-FDDIYLCPHKHGDGCECRKPSTGMLLQAAEK  105 (173)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCC-cCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence            44689999999999987 9999999986421     112333333333 222222     222222232  367788888


Q ss_pred             cCCCCCcEEEEECCcccccCCCCCeeeeC
Q 023259          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       219 Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      ++.+++++++|+|++.-.......|+.+-
T Consensus       106 l~~~p~~~i~IGD~~~Di~aA~~aGi~~i  134 (173)
T PRK06769        106 HGLDLTQCAVIGDRWTDIVAAAKVNATTI  134 (173)
T ss_pred             cCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence            99999999999999987776666666544

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=98.11  E-value=7.7e-06  Score=69.61  Aligned_cols=92  Identities=17%  Similarity=0.280  Sum_probs=66.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCccccc--------------CC--ccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTST--------------EY--REHVK  214 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~--------------k~--~~~~K  214 (285)
                      +..+||+.++|+.|++. +.++|.|++...+++.+++.++...+|..++..+.....              ..  ....|
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K  150 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK  150 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence            67899999999999877 999999999999999999999887788777754332110              00  01112


Q ss_pred             --cccccCCC-CCcEEEEECCcccccCCCCCe
Q 023259          215 --DLSCLSKD-LCRTLIVDNNPFSFLLQPLNG  243 (285)
Q Consensus       215 --dL~~Lgrd-l~~vVIVDDs~~~~~~~p~Ng  243 (285)
                        -++.+... .+++|+|+|+...+.....+.
T Consensus       151 ~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d  182 (188)
T TIGR01489       151 GKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSD  182 (188)
T ss_pred             HHHHHHHHhhcCceEEEECCCcchhchHhcCC
Confidence              23333334 788999999998876554443

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=98.05  E-value=3e-06  Score=73.56  Aligned_cols=95  Identities=18%  Similarity=0.163  Sum_probs=80.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|++|++. |.++|.|++...+++.+++.++...+|+.++..++....|..  .|.+-++.+|.+++++++
T Consensus        91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~  170 (198)
T TIGR01428        91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLF  170 (198)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence            55789999999999997 999999999999999999999988889999988876554443  577888889999999999


Q ss_pred             EECCcccccCCCCCeeee
Q 023259          229 VDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I  246 (285)
                      |+|++........+|+..
T Consensus       171 vgD~~~Di~~A~~~G~~~  188 (198)
T TIGR01428       171 VASNPWDLGGAKKFGFKT  188 (198)
T ss_pred             EeCCHHHHHHHHHCCCcE
Confidence            999997776666667653

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=98.03  E-value=3.8e-06  Score=73.29  Aligned_cols=98  Identities=18%  Similarity=0.160  Sum_probs=82.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|.|++...+++.++++++..++|..++..+.....|..  .+.+-++++|.+++++++
T Consensus        84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~  163 (213)
T TIGR01449        84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVY  163 (213)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEE
Confidence            57899999999999977 999999999999999999999998889888777665433332  577888899999999999


Q ss_pred             EECCcccccCCCCCeeeeCcc
Q 023259          229 VDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~~F  249 (285)
                      |+|++.-+......|+.+--.
T Consensus       164 igDs~~d~~aa~~aG~~~i~v  184 (213)
T TIGR01449       164 VGDSRVDIQAARAAGCPSVLL  184 (213)
T ss_pred             eCCCHHHHHHHHHCCCeEEEE
Confidence            999998887777777765443

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=98.01  E-value=1.2e-05  Score=71.28  Aligned_cols=95  Identities=13%  Similarity=0.105  Sum_probs=65.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC--Ccee--EEEecCcccccCC-----------c-cccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE--NLFS--LRLYRPSTTSTEY-----------R-EHVK  214 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~--~~f~--~~l~r~~c~~~k~-----------~-~~~K  214 (285)
                      +..+||+.+||+.|++. +.++|.|++...+++.+++.+ ..  ..+.  ..+..+.....++           + ...+
T Consensus        73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~  151 (219)
T PRK09552         73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPS  151 (219)
T ss_pred             CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHH
Confidence            67899999999999987 999999999999999999987 32  2332  2222221111010           0 1134


Q ss_pred             cccccCCCCCcEEEEECCcccccCCCCCeeeeC
Q 023259          215 DLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       215 dL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      -++.++.+.+++|.|.|+..-.......|+.+.
T Consensus       152 ~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a  184 (219)
T PRK09552        152 LIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA  184 (219)
T ss_pred             HHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence            455667778899999999988776666666443

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=98.00  E-value=4.8e-06  Score=72.95  Aligned_cols=95  Identities=12%  Similarity=0.036  Sum_probs=81.0

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--ccccccccc-CCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCL-SKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~L-grdl~~vVI  228 (285)
                      +..+||+.++|+++++.+.++|-|++....++.+++.++...+|+.+++.+++...|..  .+.+-++.+ |.+++++|+
T Consensus        96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~  175 (224)
T TIGR02254        96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLM  175 (224)
T ss_pred             CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEE
Confidence            57899999999999988999999999999999999999998999999988876655543  577888899 999999999


Q ss_pred             EECCc-ccccCCCCCeeee
Q 023259          229 VDNNP-FSFLLQPLNGIPC  246 (285)
Q Consensus       229 VDDs~-~~~~~~p~NgI~I  246 (285)
                      |+|++ ........+|+..
T Consensus       176 igD~~~~di~~A~~~G~~~  194 (224)
T TIGR02254       176 IGDSLTADIKGGQNAGLDT  194 (224)
T ss_pred             ECCCcHHHHHHHHHCCCcE
Confidence            99998 5666666667543

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK09449 dUMP phosphatase; Provisional

Probab=97.93  E-value=7.4e-06  Score=72.31  Aligned_cols=94  Identities=20%  Similarity=0.221  Sum_probs=78.7

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCC-CCCcEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSK-DLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgr-dl~~vVI  228 (285)
                      +...||+.++|+.|++.+.++|.|++....++..++.++..++|+.++..+++...|+.  .|.+-++.+|. +.+++++
T Consensus        94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~  173 (224)
T PRK09449         94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLM  173 (224)
T ss_pred             CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence            46789999999999977999999999999999999999988899999998887655544  67788888985 4589999


Q ss_pred             EECCcc-cccCCCCCeee
Q 023259          229 VDNNPF-SFLLQPLNGIP  245 (285)
Q Consensus       229 VDDs~~-~~~~~p~NgI~  245 (285)
                      |+|++. .......+|+.
T Consensus       174 vgD~~~~Di~~A~~aG~~  191 (224)
T PRK09449        174 VGDNLHSDILGGINAGID  191 (224)
T ss_pred             EcCCcHHHHHHHHHCCCc
Confidence            999984 66666666654

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=97.92  E-value=7.6e-06  Score=71.42  Aligned_cols=111  Identities=10%  Similarity=0.020  Sum_probs=87.4

Q ss_pred             EEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh-cCCCceeEEEecCcccccCCc--cccccccccCCCCCcE
Q 023259          151 TVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI-DGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRT  226 (285)
Q Consensus       151 ~V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~L-Dp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~v  226 (285)
                      +....||+.++|+.+++. +.++|.|++....+..++... +...+|+.+++.+++...|+.  .|.+-++.+|.+++++
T Consensus        82 ~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~  161 (199)
T PRK09456         82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA  161 (199)
T ss_pred             HhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence            356799999999999976 999999999988776655442 345678888888887766654  6778889999999999


Q ss_pred             EEEECCcccccCCCCCeeeeCccCCCCCCCCccCcHHHHHh
Q 023259          227 LIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQKDVRPELYE  267 (285)
Q Consensus       227 VIVDDs~~~~~~~p~NgI~I~~F~~g~~~D~~~DVR~vL~~  267 (285)
                      ++|||++.........|+..--+.++      .+++..|++
T Consensus       162 l~vgD~~~di~aA~~aG~~~i~~~~~------~~~~~~l~~  196 (199)
T PRK09456        162 VFFDDNADNIEAANALGITSILVTDK------QTIPDYFAK  196 (199)
T ss_pred             EEeCCCHHHHHHHHHcCCEEEEecCC------ccHHHHHHh
Confidence            99999999888888889987666432      455666654

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=97.90  E-value=5.6e-06  Score=70.51  Aligned_cols=93  Identities=12%  Similarity=0.123  Sum_probs=77.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|-|++  .+++.+++.++..++|..++..+.+...+..  .+.+-++.++.+.+++|+
T Consensus        87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~  164 (185)
T TIGR02009        87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVV  164 (185)
T ss_pred             CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence            56899999999999987 999999988  7799999999888899998887765544433  466777888999999999


Q ss_pred             EECCcccccCCCCCeeee
Q 023259          229 VDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I  246 (285)
                      |+|+.........+|+.+
T Consensus       165 IgD~~~di~aA~~~G~~~  182 (185)
T TIGR02009       165 FEDALAGVQAARAAGMFA  182 (185)
T ss_pred             EeCcHhhHHHHHHCCCeE
Confidence            999998887777777753

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=97.90  E-value=7e-06  Score=71.39  Aligned_cols=95  Identities=16%  Similarity=0.149  Sum_probs=64.1

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecC-cc---ccc--CCccccccccccCCCCCc
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRP-ST---TST--EYREHVKDLSCLSKDLCR  225 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~-~c---~~~--k~~~~~KdL~~Lgrdl~~  225 (285)
                      +...||+.++|+.+++.+.++|-|++...+++.+++.++...+|...+.-+ +.   ...  .......-++.++...++
T Consensus        67 ~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~~  146 (205)
T PRK13582         67 LDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGYR  146 (205)
T ss_pred             CCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCCe
Confidence            557899999999999779999999999999999999998877665443221 10   000  001111122234445578


Q ss_pred             EEEEECCcccccCCCCCeeee
Q 023259          226 TLIVDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       226 vVIVDDs~~~~~~~p~NgI~I  246 (285)
                      ++.|-|+..-......+|+.|
T Consensus       147 ~v~iGDs~~D~~~~~aa~~~v  167 (205)
T PRK13582        147 VIAAGDSYNDTTMLGEADAGI  167 (205)
T ss_pred             EEEEeCCHHHHHHHHhCCCCE
Confidence            999999998765554444444

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=97.89  E-value=1.6e-05  Score=68.31  Aligned_cols=87  Identities=15%  Similarity=0.175  Sum_probs=62.6

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCc-hhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEEC
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGL-EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~-~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDD  231 (285)
                      .-||+.++|++|++. +.++|.|++. ...+..+++.++...+     .  .+...+...+.+-++.++.+.+++++|+|
T Consensus        44 ~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~-----~--~~~KP~p~~~~~~l~~~~~~~~~~l~IGD  116 (170)
T TIGR01668        44 AYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL-----P--HAVKPPGCAFRRAHPEMGLTSEQVAVVGD  116 (170)
T ss_pred             cChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE-----c--CCCCCChHHHHHHHHHcCCCHHHEEEECC
Confidence            468999999999987 9999999998 6777777776654321     1  11122223566777888989999999999


Q ss_pred             Ccc-cccCCCCCeeeeC
Q 023259          232 NPF-SFLLQPLNGIPCI  247 (285)
Q Consensus       232 s~~-~~~~~p~NgI~I~  247 (285)
                      +.. -......+|+..-
T Consensus       117 s~~~Di~aA~~aGi~~i  133 (170)
T TIGR01668       117 RLFTDVMGGNRNGSYTI  133 (170)
T ss_pred             cchHHHHHHHHcCCeEE
Confidence            984 5655556665443

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=97.87  E-value=3.2e-05  Score=74.36  Aligned_cols=139  Identities=15%  Similarity=0.173  Sum_probs=88.1

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023259           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL  171 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-yeI  171 (285)
                      +++.|+||-||||+.... ..                |...              ..-.+...||+.++|++|.+. |.+
T Consensus         1 ~~k~l~lDrDgtl~~~~~-~~----------------y~~~--------------~~~~~~l~pGV~e~L~~Lk~~G~kL   49 (354)
T PRK05446          1 MQKILFIDRDGTLIEEPP-TD----------------FQVD--------------SLDKLAFEPGVIPALLKLQKAGYKL   49 (354)
T ss_pred             CCcEEEEeCCCCccCCCC-cc----------------cccc--------------CcccceECcCHHHHHHHHHhCCCeE
Confidence            478999999999997421 00                1000              011267899999999999977 999


Q ss_pred             EEEccC---------------chhhHHHHHHHhcCCCceeEEEec-----CcccccCCc--cccccccccCCCCCcEEEE
Q 023259          172 ILFTAG---------------LEGYARPLVDRIDGENLFSLRLYR-----PSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       172 vI~Ta~---------------~~~YA~~Vl~~LDp~~~f~~~l~r-----~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +|.|+.               ...++..+++.++..  |..++++     +.|...|..  .+..-++.++.+++++++|
T Consensus        50 ~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmI  127 (354)
T PRK05446         50 VMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVI  127 (354)
T ss_pred             EEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence            999994               234555555555542  5555544     344443332  3334445568899999999


Q ss_pred             ECCcccccCCCCCeeeeCccCCCCCCCCccCcHHHHH
Q 023259          230 DNNPFSFLLQPLNGIPCIPFSAGQPHDNQKDVRPELY  266 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I~~F~~g~~~D~~~DVR~vL~  266 (285)
                      -|+..-......+|+..--.. .+.-+. +||..+|-
T Consensus       128 GDs~sDi~aAk~aGi~~I~v~-~~~~~~-~~i~~~l~  162 (354)
T PRK05446        128 GDRETDVQLAENMGIKGIRYA-RETLNW-DAIAEQLT  162 (354)
T ss_pred             cCCHHHHHHHHHCCCeEEEEE-CCCCCH-HHHHHHHh
Confidence            999877777777777533221 222222 57777763

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=97.87  E-value=1.2e-05  Score=72.58  Aligned_cols=99  Identities=10%  Similarity=-0.013  Sum_probs=82.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce-eEEEecCcccccCCc--cccccccccCC-CCCcE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-SLRLYRPSTTSTEYR--EHVKDLSCLSK-DLCRT  226 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f-~~~l~r~~c~~~k~~--~~~KdL~~Lgr-dl~~v  226 (285)
                      +...||+.++|++|++. +.++|-|++...+++.+++.++..++| +.++..++....|..  .+.+-++.+|. +++++
T Consensus        98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~  177 (253)
T TIGR01422        98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAAC  177 (253)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchhe
Confidence            56789999999999987 999999999999999999999988885 777777775544433  67788889997 48999


Q ss_pred             EEEECCcccccCCCCCeeeeCccC
Q 023259          227 LIVDNNPFSFLLQPLNGIPCIPFS  250 (285)
Q Consensus       227 VIVDDs~~~~~~~p~NgI~I~~F~  250 (285)
                      |+|.|++.-+.....+|+.+--..
T Consensus       178 l~IGDs~~Di~aA~~aGi~~i~v~  201 (253)
T TIGR01422       178 VKVGDTVPDIEEGRNAGMWTVGLI  201 (253)
T ss_pred             EEECCcHHHHHHHHHCCCeEEEEe
Confidence            999999998888888887655443

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=97.82  E-value=8.4e-06  Score=71.41  Aligned_cols=112  Identities=15%  Similarity=-0.006  Sum_probs=82.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhh--HHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGY--ARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRT  226 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~Y--A~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~v  226 (285)
                      +...||+.++|+.|++. +.++|.|++....  +...+..++...+|+.++..+++...|..  .|.+-++++|.+++++
T Consensus        93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~  172 (211)
T TIGR02247        93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEEC  172 (211)
T ss_pred             cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHe
Confidence            56789999999999977 9999999987655  33333334555678888876665544433  6778888999999999


Q ss_pred             EEEECCcccccCCCCCeeeeCccCCCCCCCCccCcHHHHHhhc
Q 023259          227 LIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQKDVRPELYERF  269 (285)
Q Consensus       227 VIVDDs~~~~~~~p~NgI~I~~F~~g~~~D~~~DVR~vL~~~f  269 (285)
                      |+|||++.........|+..--+..+      .+.+..|.+.+
T Consensus       173 l~i~D~~~di~aA~~aG~~~i~v~~~------~~~~~~l~~~~  209 (211)
T TIGR02247       173 VFLDDLGSNLKPAAALGITTIKVSDE------EQAIHDLEKAT  209 (211)
T ss_pred             EEEcCCHHHHHHHHHcCCEEEEECCH------HHHHHHHHHHh
Confidence            99999999888888888876555321      44555555443

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=97.81  E-value=1.7e-05  Score=72.25  Aligned_cols=86  Identities=10%  Similarity=0.126  Sum_probs=59.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccC----chhhHHHHHHHhcC--CCceeEEEecCcccccCCc--cccccccccCCC
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAG----LEGYARPLVDRIDG--ENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKD  222 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~----~~~YA~~Vl~~LDp--~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrd  222 (285)
                      ....||+.+||+++.+. ++|++-|+.    ...+++.+++.++.  ..+|..++..+..  .+..  ...+       .
T Consensus       113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K~~K~~~l~-------~  183 (237)
T PRK11009        113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQYTKTQWLK-------K  183 (237)
T ss_pred             CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CCCCHHHHHH-------h
Confidence            45667799999999777 999999984    46688888887877  6677666655532  1211  1222       2


Q ss_pred             CCcEEEEECCcccccCCCCCeeee
Q 023259          223 LCRTLIVDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       223 l~~vVIVDDs~~~~~~~p~NgI~I  246 (285)
                      .+-+|+|-|+..-+.....+|+..
T Consensus       184 ~~i~I~IGDs~~Di~aA~~AGi~~  207 (237)
T PRK11009        184 KNIRIFYGDSDNDITAAREAGARG  207 (237)
T ss_pred             cCCeEEEcCCHHHHHHHHHcCCcE
Confidence            334899999988887776676653

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=97.76  E-value=0.0002  Score=66.61  Aligned_cols=102  Identities=16%  Similarity=0.126  Sum_probs=74.5

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCC---------------ccccccccc
Q 023259          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY---------------REHVKDLSC  218 (285)
Q Consensus       155 RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~---------------~~~~KdL~~  218 (285)
                      =|.+-+-|.+|++. .-+++||.|.+++|..-+++++..++|..++.+........               ..+..|+..
T Consensus       144 ~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~  223 (297)
T PF05152_consen  144 DPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVTN  223 (297)
T ss_pred             ChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeCCc
Confidence            47888999999988 58999999999999999999999999999988765322111               022333333


Q ss_pred             ---c--------------CC-CCCcEEEEECCcccccCCCCCeeeeCccCCCCCCCCc
Q 023259          219 ---L--------------SK-DLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQ  258 (285)
Q Consensus       219 ---L--------------gr-dl~~vVIVDDs~~~~~~~p~NgI~I~~F~~g~~~D~~  258 (285)
                         |              |. =.+.+.+|||-+.+= ..-+|-+.|+..- ...+|.+
T Consensus       224 ~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~~Nn-~~YD~FVnvkrcp-~P~~DW~  279 (297)
T PF05152_consen  224 VNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNN-YSYDYFVNVKRCP-VPVNDWQ  279 (297)
T ss_pred             CCCCCCCCeehHHHHHHcCCceeeeEEEeccCcccC-ccceeEEEeccCC-CCchHHH
Confidence               2              22 245678999988664 5778999999884 5456654

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=97.73  E-value=8.5e-05  Score=74.87  Aligned_cols=113  Identities=14%  Similarity=0.026  Sum_probs=75.8

Q ss_pred             CCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-ce
Q 023259           92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-AD  170 (285)
Q Consensus        92 ~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-ye  170 (285)
                      ...+.+.||+||||+....-..++..                             ..++ ..+-||+.+.|+.|.+. |.
T Consensus       166 ~~~Kia~fD~DGTLi~t~sg~~~~~~-----------------------------~~d~-~~l~pgV~e~L~~L~~~Gy~  215 (526)
T TIGR01663       166 GQEKIAGFDLDGTIIKTKSGKVFPKG-----------------------------PDDW-QIIFPEIPEKLKELEADGFK  215 (526)
T ss_pred             ccCcEEEEECCCCccccCCCccCCCC-----------------------------HHHe-eecccCHHHHHHHHHHCCCE
Confidence            46789999999999964210011100                             0111 22469999999999988 99


Q ss_pred             EEEEccCch------------hhHHHHHHHhcCCCceeEEEecCcccccCCc--ccccccccc----CCCCCcEEEEECC
Q 023259          171 LILFTAGLE------------GYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCL----SKDLCRTLIVDNN  232 (285)
Q Consensus       171 IvI~Ta~~~------------~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~L----grdl~~vVIVDDs  232 (285)
                      |+|+|+...            ..+..+++.++..  |...+..+.|...|..  .+..-++.+    +.+++++++|-|+
T Consensus       216 IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDa  293 (526)
T TIGR01663       216 ICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDA  293 (526)
T ss_pred             EEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCc
Confidence            999999766            4678888888764  6655555565554443  333333333    4789999999999


Q ss_pred             cccc
Q 023259          233 PFSF  236 (285)
Q Consensus       233 ~~~~  236 (285)
                      ..-.
T Consensus       294 agr~  297 (526)
T TIGR01663       294 AGRP  297 (526)
T ss_pred             ccch
Confidence            8554

Note that the EC number for the kinase function is: 2.7.1.78

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=97.72  E-value=2.4e-05  Score=70.21  Aligned_cols=92  Identities=17%  Similarity=0.160  Sum_probs=73.9

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccC--------CccccccccccCCC-
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTE--------YREHVKDLSCLSKD-  222 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k--------~~~~~KdL~~Lgrd-  222 (285)
                      ++.-|-|+++|-.|.+.+ .++||++.+..|..++.+|+...+|..+++++..-..+        ...|.|-....|.+ 
T Consensus        99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~  177 (244)
T KOG3109|consen   99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDS  177 (244)
T ss_pred             cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCC
Confidence            566677899999998877 89999999999999999999999999988876422111        12456666667776 


Q ss_pred             CCcEEEEECCcccccCCCCCee
Q 023259          223 LCRTLIVDNNPFSFLLQPLNGI  244 (285)
Q Consensus       223 l~~vVIVDDs~~~~~~~p~NgI  244 (285)
                      +++++++|||..+......-|.
T Consensus       178 p~~t~FfDDS~~NI~~ak~vGl  199 (244)
T KOG3109|consen  178 PRNTYFFDDSERNIQTAKEVGL  199 (244)
T ss_pred             cCceEEEcCchhhHHHHHhccc
Confidence            9999999999999887776665

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=97.71  E-value=2.7e-05  Score=65.82  Aligned_cols=86  Identities=9%  Similarity=0.065  Sum_probs=65.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVD  230 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVD  230 (285)
                      +..+++.  -|++|++. +.++|-|+.....+..+++.++...+|...       ..+...+.+-++.++.+.++++.|-
T Consensus        29 ~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~~-------~~k~~~~~~~~~~~~~~~~~~~~vG   99 (154)
T TIGR01670        29 FNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQGQ-------SNKLIAFSDILEKLALAPENVAYIG   99 (154)
T ss_pred             EechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEecc-------cchHHHHHHHHHHcCCCHHHEEEEC
Confidence            4567776  79999877 999999999999999999999877666421       1222344555677888999999999


Q ss_pred             CCcccccCCCCCeeee
Q 023259          231 NNPFSFLLQPLNGIPC  246 (285)
Q Consensus       231 Ds~~~~~~~p~NgI~I  246 (285)
                      |+..-.......|+.+
T Consensus       100 Ds~~D~~~~~~ag~~~  115 (154)
T TIGR01670       100 DDLIDWPVMEKVGLSV  115 (154)
T ss_pred             CCHHHHHHHHHCCCeE
Confidence            9998777666666653

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=97.69  E-value=5.6e-05  Score=66.40  Aligned_cols=94  Identities=16%  Similarity=0.066  Sum_probs=81.7

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +..-|++.++|+.+++.|+++|.|+|...++...++.++...+|+.+++.++.+..|..  .|..-++.+|.+++++++|
T Consensus        98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~V  177 (229)
T COG1011          98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFV  177 (229)
T ss_pred             CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEEE
Confidence            67789999999999988999999999999999999999988899999999988866644  6888999999999999999


Q ss_pred             ECCcccc-cCCCCCeee
Q 023259          230 DNNPFSF-LLQPLNGIP  245 (285)
Q Consensus       230 DDs~~~~-~~~p~NgI~  245 (285)
                      ||+...- .....-|+.
T Consensus       178 gD~~~~di~gA~~~G~~  194 (229)
T COG1011         178 GDSLENDILGARALGMK  194 (229)
T ss_pred             CCChhhhhHHHHhcCcE
Confidence            9999887 444444553

>PLN02954 phosphoserine phosphatase

Probab=97.68  E-value=4.9e-05  Score=67.07  Aligned_cols=92  Identities=14%  Similarity=0.191  Sum_probs=61.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC--CceeEEEecCc-------------ccc-cCCccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE--NLFSLRLYRPS-------------TTS-TEYREHVK  214 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~--~~f~~~l~r~~-------------c~~-~k~~~~~K  214 (285)
                      ..++||+.++|+.+++. +.++|-|++...+++.+++.++..  .+|...+..+.             |.. .|.....+
T Consensus        83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~  162 (224)
T PLN02954         83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH  162 (224)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence            45789999999999887 899999999999999999998765  45644322111             100 01111112


Q ss_pred             cccccCCCCCcEEEEECCcccccCCCCCeee
Q 023259          215 DLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       215 dL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~  245 (285)
                      -++.++  .+++|+|-|+..-......+|+.
T Consensus       163 ~~~~~~--~~~~i~iGDs~~Di~aa~~~~~~  191 (224)
T PLN02954        163 IKKKHG--YKTMVMIGDGATDLEARKPGGAD  191 (224)
T ss_pred             HHHHcC--CCceEEEeCCHHHHHhhhcCCCC
Confidence            222233  46899999999988775554443

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=97.67  E-value=3.5e-05  Score=71.70  Aligned_cols=119  Identities=13%  Similarity=0.156  Sum_probs=84.6

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCcee--EEEecCcccccCCc--cccccccccCCCCCcE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFS--LRLYRPSTTSTEYR--EHVKDLSCLSKDLCRT  226 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~--~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~v  226 (285)
                      +...||+.++|++|++. +.++|.|++...++..+++.+.-.+++.  ..+..+++...|..  .+.+-++.+|.+++++
T Consensus       143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~  222 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRC  222 (286)
T ss_pred             CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHE
Confidence            46899999999999987 9999999999999999998774333332  12255555444433  6778888899999999


Q ss_pred             EEEECCcccccCCCCCeeeeCccCCCCCCCCc--------cCcHHHHHhhcC
Q 023259          227 LIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQ--------KDVRPELYERFH  270 (285)
Q Consensus       227 VIVDDs~~~~~~~p~NgI~I~~F~~g~~~D~~--------~DVR~vL~~~f~  270 (285)
                      |+|+|++..+.....+|+.+--...|.....+        +|++.+..++++
T Consensus       223 l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~~~~  274 (286)
T PLN02779        223 VVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLEDFD  274 (286)
T ss_pred             EEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchhhhH
Confidence            99999999888777777655443322211111        666666655554

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=97.65  E-value=3e-05  Score=66.01  Aligned_cols=93  Identities=11%  Similarity=0.118  Sum_probs=75.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      ....||+.++|+.|++. +.++|-|++.  .+..++++++...+|+.++..++....|..  .|.+-+++++.+.+++|+
T Consensus        86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~  163 (185)
T TIGR01990        86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIG  163 (185)
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence            35789999999999977 9999999864  467889999888889988877654433332  577888889999999999


Q ss_pred             EECCcccccCCCCCeeee
Q 023259          229 VDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I  246 (285)
                      |+|++..+.....+|+.+
T Consensus       164 vgD~~~di~aA~~aG~~~  181 (185)
T TIGR01990       164 IEDAQAGIEAIKAAGMFA  181 (185)
T ss_pred             EecCHHHHHHHHHcCCEE
Confidence            999998887777777754

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=97.64  E-value=3e-05  Score=69.81  Aligned_cols=95  Identities=15%  Similarity=0.070  Sum_probs=73.6

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh---cCCCceeEEEecCcccccCCccccccccccCCCCCcEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI---DGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTL  227 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~L---Dp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vV  227 (285)
                      ..+.||+.++|+++++. +.++|+|+++....+.+++..   +...+|+..+....+...+...|.+-++.+|.++++++
T Consensus        94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e~l  173 (220)
T TIGR01691        94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPREIL  173 (220)
T ss_pred             cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChhHEE
Confidence            45789999999999977 999999999999999888876   44445655543322222223378888999999999999


Q ss_pred             EEECCcccccCCCCCeeee
Q 023259          228 IVDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       228 IVDDs~~~~~~~p~NgI~I  246 (285)
                      +|+|+..........|+.+
T Consensus       174 fVgDs~~Di~AA~~AG~~t  192 (220)
T TIGR01691       174 FLSDIINELDAARKAGLHT  192 (220)
T ss_pred             EEeCCHHHHHHHHHcCCEE
Confidence            9999998877777777654

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=97.63  E-value=4.9e-05  Score=73.62  Aligned_cols=144  Identities=28%  Similarity=0.328  Sum_probs=96.7

Q ss_pred             CCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhcceE
Q 023259           92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADL  171 (285)
Q Consensus        92 ~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~yeI  171 (285)
                      .++..+|.|+|.|.+|+.--.+.|.... +..+.....+      .+....+  ....++++.||++..|+...++.|++
T Consensus        24 ~~~~~l~~~~~~~~~h~~~~~~~p~~~~-~~~~~~~~~~------~~~~~~~--~~~~~~~k~~~~l~~~~~~i~~~~e~   94 (390)
T COG5190          24 DKKLILVVDLDQTIIHTTVDPNDPNNVN-QSLERTLKSV------NDRDPVQ--EKCAYYVKARPKLFPFLTKISPLYEL   94 (390)
T ss_pred             CcccccccccccceecccccCCCCCchh-hhhhccccch------hcccccc--ccccceeeecccccchhhhhchhcce
Confidence            4677799999999999754333333221 2222111111      1111111  12457799999999999999999999


Q ss_pred             EEEccCchhhHHHHHHHhcCCC-ceeEEE-ecCcccccCCcccccccccc-CCCCCcEEEEECCcccccCC--CCCeeee
Q 023259          172 ILFTAGLEGYARPLVDRIDGEN-LFSLRL-YRPSTTSTEYREHVKDLSCL-SKDLCRTLIVDNNPFSFLLQ--PLNGIPC  246 (285)
Q Consensus       172 vI~Ta~~~~YA~~Vl~~LDp~~-~f~~~l-~r~~c~~~k~~~~~KdL~~L-grdl~~vVIVDDs~~~~~~~--p~NgI~I  246 (285)
                      .++|+|+..|++.+.+++||.| .|..+. .++.-    ...-.|-++.+ ..+...++++||.+..|.-+  -.|.+..
T Consensus        95 ~~~~~~~~~~~~~~~~i~d~~g~~~~d~~~~~~~~----~~~~~~s~~~l~p~~~n~~vi~~d~~~~~~~~d~~~~~v~~  170 (390)
T COG5190          95 HIYTMGTRAYAERIAKIIDPTGKLFNDRILSRDES----GSLSQKSLSRLFPKDQNMVVIIDDRGDVWGVGDMNSNFVAK  170 (390)
T ss_pred             eeEeeccccchhhhhhccccccccccccccccccc----ccchhhhhhhcCccccccccccccccccCCccchhhhhhcc
Confidence            9999999999999999999976 565443 34331    23456777776 57889999999999998221  2345555


Q ss_pred             Cc
Q 023259          247 IP  248 (285)
Q Consensus       247 ~~  248 (285)
                      .+
T Consensus       171 ~~  172 (390)
T COG5190         171 SP  172 (390)
T ss_pred             cc
Confidence            55

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=97.62  E-value=4.5e-05  Score=66.25  Aligned_cols=92  Identities=13%  Similarity=0.023  Sum_probs=74.2

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      ..-||+.++|++|++. +.++|.|++... +..+++.++..++|..++..+++...|..  .+.+-++.+|.+++++|+|
T Consensus       105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~I  183 (203)
T TIGR02252       105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHI  183 (203)
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEE
Confidence            5689999999999987 999999998875 47888888888889988887776655543  5778888899999999999


Q ss_pred             ECCc-ccccCCCCCeee
Q 023259          230 DNNP-FSFLLQPLNGIP  245 (285)
Q Consensus       230 DDs~-~~~~~~p~NgI~  245 (285)
                      +|+. .-.......|+.
T Consensus       184 gD~~~~Di~~A~~aG~~  200 (203)
T TIGR02252       184 GDSLRNDYQGARAAGWR  200 (203)
T ss_pred             CCCchHHHHHHHHcCCe
Confidence            9997 455555555654

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=97.57  E-value=8.2e-05  Score=67.97  Aligned_cols=98  Identities=11%  Similarity=-0.016  Sum_probs=80.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce-eEEEecCcccccCCc--cccccccccCCC-CCcE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-SLRLYRPSTTSTEYR--EHVKDLSCLSKD-LCRT  226 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f-~~~l~r~~c~~~k~~--~~~KdL~~Lgrd-l~~v  226 (285)
                      +..-||+.++|+.|++. +.++|-|++....++.+++.+...++| ..++..+++...|..  .+.+-++.+|.+ .+++
T Consensus       100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~  179 (267)
T PRK13478        100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC  179 (267)
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence            46789999999999977 999999999999999999998877764 777777776544433  677888889975 6999


Q ss_pred             EEEECCcccccCCCCCeeeeCcc
Q 023259          227 LIVDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       227 VIVDDs~~~~~~~p~NgI~I~~F  249 (285)
                      |+|+|++.-+.....+|+.+--.
T Consensus       180 l~IGDs~~Di~aA~~aG~~~i~v  202 (267)
T PRK13478        180 VKVDDTVPGIEEGLNAGMWTVGV  202 (267)
T ss_pred             EEEcCcHHHHHHHHHCCCEEEEE
Confidence            99999998888778888755443

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=97.51  E-value=7.6e-05  Score=66.21  Aligned_cols=90  Identities=14%  Similarity=0.190  Sum_probs=62.1

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCc--ccc-----cCC--ccccccccccCCC
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPS--TTS-----TEY--REHVKDLSCLSKD  222 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~--c~~-----~k~--~~~~KdL~~Lgrd  222 (285)
                      +..+||+.+||+.+++.+.++|-|++...+++++++.++...+|..++--++  ...     .+.  ...++.+...+  
T Consensus        67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~--  144 (203)
T TIGR02137        67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY--  144 (203)
T ss_pred             CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC--
Confidence            5689999999999998889999999999999999999998877765433322  100     010  12233333333  


Q ss_pred             CCcEEEEECCcccccCCCCCee
Q 023259          223 LCRTLIVDNNPFSFLLQPLNGI  244 (285)
Q Consensus       223 l~~vVIVDDs~~~~~~~p~NgI  244 (285)
                       .+++.|-|+..-.......|+
T Consensus       145 -~~~v~vGDs~nDl~ml~~Ag~  165 (203)
T TIGR02137       145 -YRVIAAGDSYNDTTMLSEAHA  165 (203)
T ss_pred             -CCEEEEeCCHHHHHHHHhCCC
Confidence             379999999886554433343

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=97.48  E-value=0.0001  Score=70.02  Aligned_cols=96  Identities=15%  Similarity=0.202  Sum_probs=68.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEe-------cC---cccccCC-c-cccccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLY-------RP---STTSTEY-R-EHVKDLSC  218 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~-------r~---~c~~~k~-~-~~~KdL~~  218 (285)
                      +.++||+.++|+.|++. +.++|.|++...+++.+.++++....+...+-       ..   .+...+. . .+.+-++.
T Consensus       180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~  259 (322)
T PRK11133        180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQE  259 (322)
T ss_pred             CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHH
Confidence            66899999999999988 99999999999999999999887654432221       10   1111111 1 22333456


Q ss_pred             cCCCCCcEEEEECCcccccCCCCCeeeeC
Q 023259          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       219 Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      +|.+++++|.|-|+..-.......|+.|-
T Consensus       260 lgi~~~qtIaVGDg~NDl~m~~~AGlgiA  288 (322)
T PRK11133        260 YEIPLAQTVAIGDGANDLPMIKAAGLGIA  288 (322)
T ss_pred             cCCChhhEEEEECCHHHHHHHHHCCCeEE
Confidence            78899999999999988776666666554

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=97.43  E-value=0.00028  Score=61.32  Aligned_cols=82  Identities=12%  Similarity=0.167  Sum_probs=69.2

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEEE
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVD  230 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIVD  230 (285)
                      ..|+..++|+.|++. +.++|.|++...+++.+++.++...+|..+++.++... |..  .+.+-++.+|.+.+++|+|+
T Consensus       107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vG  185 (197)
T TIGR01548       107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMVG  185 (197)
T ss_pred             cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEEe
Confidence            345669999999987 99999999999999999999999899998888877543 432  56778888999999999999


Q ss_pred             CCcccc
Q 023259          231 NNPFSF  236 (285)
Q Consensus       231 Ds~~~~  236 (285)
                      |++.-.
T Consensus       186 D~~~Di  191 (197)
T TIGR01548       186 DTVDDI  191 (197)
T ss_pred             CCHHHH
Confidence            998544

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PLN02811 hydrolase

Probab=97.40  E-value=0.0001  Score=65.30  Aligned_cols=98  Identities=9%  Similarity=0.038  Sum_probs=74.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHH-HHHHhcCCCceeEEEecC--cccccCC--ccccccccccC---CC
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARP-LVDRIDGENLFSLRLYRP--STTSTEY--REHVKDLSCLS---KD  222 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~-Vl~~LDp~~~f~~~l~r~--~c~~~k~--~~~~KdL~~Lg---rd  222 (285)
                      +...||+.++|+.|++. +.++|-|++...+... ..+......+|..+++.+  ++...|.  ..|.+-++.++   .+
T Consensus        77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~  156 (220)
T PLN02811         77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVD  156 (220)
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCC
Confidence            45689999999999987 9999999998875543 333334456788888888  6554443  36777777775   88


Q ss_pred             CCcEEEEECCcccccCCCCCeeeeCcc
Q 023259          223 LCRTLIVDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       223 l~~vVIVDDs~~~~~~~p~NgI~I~~F  249 (285)
                      .+++|+|+|+..-+.....+|+.+--.
T Consensus       157 ~~~~v~IgDs~~di~aA~~aG~~~i~v  183 (220)
T PLN02811        157 PGKVLVFEDAPSGVEAAKNAGMSVVMV  183 (220)
T ss_pred             ccceEEEeccHhhHHHHHHCCCeEEEE
Confidence            999999999999888777777765544

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=97.32  E-value=6e-05  Score=68.08  Aligned_cols=96  Identities=15%  Similarity=0.180  Sum_probs=76.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhc-CCCceeEEEe--cCcccccCC--ccccccccccCCCC-C
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID-GENLFSLRLY--RPSTTSTEY--REHVKDLSCLSKDL-C  224 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LD-p~~~f~~~l~--r~~c~~~k~--~~~~KdL~~Lgrdl-~  224 (285)
                      +..-||+.+++..|..+ -.+.++|++.+..++..++++. .-..|.....  -+.+...|.  ..|.+-.+.+|-+. +
T Consensus        91 ~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~  170 (222)
T KOG2914|consen   91 SILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPS  170 (222)
T ss_pred             cccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCcc
Confidence            77889999999999988 9999999999999999888886 5566777666  334433322  37899999999888 9


Q ss_pred             cEEEEECCcccccCCCCCeeeeC
Q 023259          225 RTLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       225 ~vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      ++++++|++.........|.+|.
T Consensus       171 k~lVfeds~~Gv~aa~aagm~vi  193 (222)
T KOG2914|consen  171 KCLVFEDSPVGVQAAKAAGMQVV  193 (222)
T ss_pred             ceEEECCCHHHHHHHHhcCCeEE
Confidence            99999999998766555544433

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=97.31  E-value=0.00049  Score=62.06  Aligned_cols=77  Identities=5%  Similarity=0.006  Sum_probs=54.0

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHH--HHHHHhcCCC-ceeEEEecCcccccCCccccccccccCCCCCcEEEE
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYAR--PLVDRIDGEN-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~--~Vl~~LDp~~-~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIV  229 (285)
                      .-||+.++|++|++. +.++|.|++.+..++  ..++.++... .|..++.......   .....-++.++.+.+++++|
T Consensus        25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~---~~l~~~~~~~~~~~~~~~~v  101 (242)
T TIGR01459        25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAV---QMILESKKRFDIRNGIIYLL  101 (242)
T ss_pred             cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHH---HHHHhhhhhccCCCceEEEe
Confidence            369999999999987 999999999888776  7788888776 7888777664321   11112223345555667777


Q ss_pred             ECCc
Q 023259          230 DNNP  233 (285)
Q Consensus       230 DDs~  233 (285)
                      -|..
T Consensus       102 Gd~~  105 (242)
T TIGR01459       102 GHLE  105 (242)
T ss_pred             CCcc
Confidence            6655

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PRK08238 hypothetical protein; Validated

Probab=97.30  E-value=0.0007  Score=67.65  Aligned_cols=91  Identities=13%  Similarity=0.044  Sum_probs=60.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc-cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR-EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~-~~~KdL~~Lgrdl~~vVIV  229 (285)
                      ...+||+.++|+++++. +.++|-|++.+.+++++++.++.   |+.++..+.....+.. .-.+-.+.++  .++++.+
T Consensus        71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~yv  145 (479)
T PRK08238         71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFDYA  145 (479)
T ss_pred             CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccccCCchHHHHHHHHhC--ccCeeEe
Confidence            45789999999999977 99999999999999999999865   7777776653322211 1111112233  3457778


Q ss_pred             ECCcccccC--CCCCeeeeC
Q 023259          230 DNNPFSFLL--QPLNGIPCI  247 (285)
Q Consensus       230 DDs~~~~~~--~p~NgI~I~  247 (285)
                      -|+..-...  .-+|.+.|.
T Consensus       146 GDS~~Dlp~~~~A~~av~Vn  165 (479)
T PRK08238        146 GNSAADLPVWAAARRAIVVG  165 (479)
T ss_pred             cCCHHHHHHHHhCCCeEEEC
Confidence            887754432  334555544

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=97.25  E-value=0.00023  Score=70.30  Aligned_cols=93  Identities=15%  Similarity=0.150  Sum_probs=76.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccc-cCCccccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS-TEYREHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~-~k~~~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +...||+.++|++|++. +.++|.|++...+++.+++.++..++|..++..++... .++..+.+-++.++  ++++|+|
T Consensus       329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v~V  406 (459)
T PRK06698        329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYD--IKEAAVV  406 (459)
T ss_pred             CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcC--cceEEEE
Confidence            56789999999999877 99999999999999999999999899999888876531 23345555666554  5889999


Q ss_pred             ECCcccccCCCCCeeee
Q 023259          230 DNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I  246 (285)
                      .|++.-+.....+|+.+
T Consensus       407 GDs~~Di~aAk~AG~~~  423 (459)
T PRK06698        407 GDRLSDINAAKDNGLIA  423 (459)
T ss_pred             eCCHHHHHHHHHCCCeE
Confidence            99998888777787654

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=97.12  E-value=0.00022  Score=62.01  Aligned_cols=79  Identities=9%  Similarity=0.080  Sum_probs=58.1

Q ss_pred             HHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccCC
Q 023259          161 FLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQ  239 (285)
Q Consensus       161 FL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~  239 (285)
                      =++.+.+. ++++|-|+.....+..+++.+....+|.       +...+...+.+-++.+|.+.++++.|-|+..-....
T Consensus        56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~-------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a  128 (183)
T PRK09484         56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ-------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVM  128 (183)
T ss_pred             HHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec-------CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence            34445544 9999999999999999999998766554       111222345566777899999999999999877766


Q ss_pred             CCCeeee
Q 023259          240 PLNGIPC  246 (285)
Q Consensus       240 p~NgI~I  246 (285)
                      ...|+.+
T Consensus       129 ~~aG~~~  135 (183)
T PRK09484        129 EKVGLSV  135 (183)
T ss_pred             HHCCCeE
Confidence            6666654

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=97.09  E-value=0.0028  Score=54.15  Aligned_cols=81  Identities=15%  Similarity=0.115  Sum_probs=43.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCc-------hh-------hHHHHHHHhcCCCceeEEEec---CcccccCCcccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGL-------EG-------YARPLVDRIDGENLFSLRLYR---PSTTSTEYREHV  213 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~-------~~-------YA~~Vl~~LDp~~~f~~~l~r---~~c~~~k~~~~~  213 (285)
                      ...-|++.+-|+++.+. |.|+|+|+-.       ..       ..+.+++.++..   ..++..   +.|-....|.+.
T Consensus        28 ~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip---~~~~~a~~~d~~RKP~~GM~~  104 (159)
T PF08645_consen   28 KFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP---IQVYAAPHKDPCRKPNPGMWE  104 (159)
T ss_dssp             EEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS----EEEEECGCSSTTSTTSSHHHH
T ss_pred             hhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc---eEEEecCCCCCCCCCchhHHH
Confidence            44678999999999987 9999999762       12       223333333222   222222   223222223333


Q ss_pred             ccccccC----CCCCcEEEEECCccc
Q 023259          214 KDLSCLS----KDLCRTLIVDNNPFS  235 (285)
Q Consensus       214 KdL~~Lg----rdl~~vVIVDDs~~~  235 (285)
                      .-++.++    .|+++.++|=|+...
T Consensus       105 ~~~~~~~~~~~id~~~Sf~VGDaagr  130 (159)
T PF08645_consen  105 FALKDYNDGVEIDLANSFYVGDAAGR  130 (159)
T ss_dssp             HHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred             HHHHhccccccccccceEEEeccCCC
Confidence            3333333    488888999887654

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=97.06  E-value=0.00015  Score=61.40  Aligned_cols=79  Identities=8%  Similarity=0.012  Sum_probs=67.5

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +...||+.++|+.      ++|.|++...+++.++++++...+|+.+++.+++...|..  .|.+-++++|.+++++++|
T Consensus        89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v  162 (175)
T TIGR01493        89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV  162 (175)
T ss_pred             CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence            5689999999993      7899999999999999999988889988888876555543  6788899999999999999


Q ss_pred             ECCcccc
Q 023259          230 DNNPFSF  236 (285)
Q Consensus       230 DDs~~~~  236 (285)
                      +|+....
T Consensus       163 gD~~~Di  169 (175)
T TIGR01493       163 AAHQWDL  169 (175)
T ss_pred             ecChhhH
Confidence            9997543

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=96.87  E-value=0.003  Score=58.61  Aligned_cols=80  Identities=14%  Similarity=0.128  Sum_probs=49.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhc---CCCc-eeEEEecCcccccCCccccccccccCCCCCcE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID---GENL-FSLRLYRPSTTSTEYREHVKDLSCLSKDLCRT  226 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LD---p~~~-f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~v  226 (285)
                      ...-||+.+||+++.+. ..+++.|+....+.+...+.|.   .... +.+++.++.- ..|.. -.+   .+-..-.-+
T Consensus       117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~-~~K~~-rr~---~I~~~y~Iv  191 (266)
T TIGR01533       117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDK-SSKES-RRQ---KVQKDYEIV  191 (266)
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCC-CCcHH-HHH---HHHhcCCEE
Confidence            44679999999999887 8999999998777665555544   3332 3567777532 22211 111   111111227


Q ss_pred             EEEECCcccc
Q 023259          227 LIVDNNPFSF  236 (285)
Q Consensus       227 VIVDDs~~~~  236 (285)
                      +.|.|+..-+
T Consensus       192 l~vGD~~~Df  201 (266)
T TIGR01533       192 LLFGDNLLDF  201 (266)
T ss_pred             EEECCCHHHh
Confidence            7788877655

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=96.77  E-value=0.0031  Score=56.42  Aligned_cols=95  Identities=15%  Similarity=0.165  Sum_probs=69.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCC--c---------ccc-ccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--R---------EHV-KDLSC  218 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~--~---------~~~-KdL~~  218 (285)
                      ..++||+.+.++.+++. +.++|.|+|...+++++.++++....+..++-.++-..+..  +         .-. .-++.
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~  155 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAE  155 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHH
Confidence            67899999999999999 99999999999999999999998877776666554111110  0         111 22234


Q ss_pred             cCCCCCcEEEEECCcccccCC--CCCeeee
Q 023259          219 LSKDLCRTLIVDNNPFSFLLQ--PLNGIPC  246 (285)
Q Consensus       219 Lgrdl~~vVIVDDs~~~~~~~--p~NgI~I  246 (285)
                      +|.++++++-+=|+..-....  -++++.+
T Consensus       156 ~g~~~~~~~a~gDs~nDlpml~~ag~~ia~  185 (212)
T COG0560         156 LGIPLEETVAYGDSANDLPMLEAAGLPIAV  185 (212)
T ss_pred             cCCCHHHeEEEcCchhhHHHHHhCCCCeEe
Confidence            588899999999988765443  3444443

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=96.75  E-value=0.0008  Score=60.56  Aligned_cols=90  Identities=14%  Similarity=0.035  Sum_probs=70.0

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +..-||+.++|+.|++.|.++|.|++...     ++..+..++|+.++..+.....|..  .|.+-++.+|.+++++|+|
T Consensus       112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~V  186 (238)
T PRK10748        112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHV  186 (238)
T ss_pred             CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEE
Confidence            44569999999999988999999998765     3666777789988887765444433  5777788899999999999


Q ss_pred             ECCc-ccccCCCCCeeee
Q 023259          230 DNNP-FSFLLQPLNGIPC  246 (285)
Q Consensus       230 DDs~-~~~~~~p~NgI~I  246 (285)
                      .|++ .-......+|+..
T Consensus       187 GD~~~~Di~~A~~aG~~~  204 (238)
T PRK10748        187 GDDLTTDVAGAIRCGMQA  204 (238)
T ss_pred             cCCcHHHHHHHHHCCCeE
Confidence            9995 6666666677654

>PTZ00445 p36-lilke protein; Provisional

Probab=96.71  E-value=0.0011  Score=59.44  Aligned_cols=135  Identities=9%  Similarity=0.051  Sum_probs=82.9

Q ss_pred             ccCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-
Q 023259           90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-  168 (285)
Q Consensus        90 ~~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-  168 (285)
                      +..+-+.+++|||.|||. +++.-   +.+.                   ..++    ..+.-..+|.+.++++.|.+. 
T Consensus        39 ~~~GIk~Va~D~DnTlI~-~HsgG---~~~~-------------------~~~~----~~~~~~~tpefk~~~~~l~~~~   91 (219)
T PTZ00445         39 NECGIKVIASDFDLTMIT-KHSGG---YIDP-------------------DNDD----IRVLTSVTPDFKILGKRLKNSN   91 (219)
T ss_pred             HHcCCeEEEecchhhhhh-hhccc---ccCC-------------------Ccch----hhhhccCCHHHHHHHHHHHHCC
Confidence            345789999999999995 22211   0000                   0000    112244799999999999977 


Q ss_pred             ceEEEEccCchhh---------------HHHHHHHhcCCCceeEEE------ecCc-----ccccCC--cc--c--cccc
Q 023259          169 ADLILFTAGLEGY---------------ARPLVDRIDGENLFSLRL------YRPS-----TTSTEY--RE--H--VKDL  216 (285)
Q Consensus       169 yeIvI~Ta~~~~Y---------------A~~Vl~~LDp~~~f~~~l------~r~~-----c~~~k~--~~--~--~KdL  216 (285)
                      +.|+|-|-+.+..               ++..++.=.-+-.+..++      +.+.     +...++  ..  |  .+-+
T Consensus        92 I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll  171 (219)
T PTZ00445         92 IKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVC  171 (219)
T ss_pred             CeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHH
Confidence            9999999887744               334443221111122111      1111     011111  12  4  5566


Q ss_pred             cccCCCCCcEEEEECCcccccCCCCCeeeeCccCC
Q 023259          217 SCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSA  251 (285)
Q Consensus       217 ~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~~F~~  251 (285)
                      +..|.+++++++|||++.++.....-|+..--|.+
T Consensus       172 ~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~  206 (219)
T PTZ00445        172 SDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTG  206 (219)
T ss_pred             HHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence            77799999999999999999888888888777753

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=96.66  E-value=0.0016  Score=64.60  Aligned_cols=132  Identities=20%  Similarity=0.193  Sum_probs=78.9

Q ss_pred             CCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-ce
Q 023259           92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-AD  170 (285)
Q Consensus        92 ~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-ye  170 (285)
                      +.|+.||||||+||+--.-    .        +.|..-..+.     -..+|..         =--+.+|...+.+. .=
T Consensus       220 ~~kK~LVLDLDNTLWGGVI----G--------edGv~GI~Ls-----~~~~G~~---------fk~fQ~~Ik~l~kqGVl  273 (574)
T COG3882         220 KSKKALVLDLDNTLWGGVI----G--------EDGVDGIRLS-----NSAEGEA---------FKTFQNFIKGLKKQGVL  273 (574)
T ss_pred             cccceEEEecCCccccccc----c--------cccccceeec-----CCCCchh---------HHHHHHHHHHHHhccEE
Confidence            4699999999999996321    0        1222111110     1112221         01256777777777 77


Q ss_pred             EEEEccCchhhHHHHHHHhcCCCcee-EEEecCccccc-CCccccccccccCCCCCcEEEEECCcccccCCCCCe-eeeC
Q 023259          171 LILFTAGLEGYARPLVDRIDGENLFS-LRLYRPSTTST-EYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNG-IPCI  247 (285)
Q Consensus       171 IvI~Ta~~~~YA~~Vl~~LDp~~~f~-~~l~r~~c~~~-k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~Ng-I~I~  247 (285)
                      ++|-|-....-|..+.++. |+=.+. .-+.+-+|-.. |-....|..++||-..+..|++||+|.....-..++ +.|.
T Consensus       274 Lav~SKN~~~da~evF~kh-p~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~v~Vi  352 (574)
T COG3882         274 LAVCSKNTEKDAKEVFRKH-PDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELPVSVI  352 (574)
T ss_pred             EEEecCCchhhHHHHHhhC-CCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCceeec
Confidence            8899999999888887643 211111 01122223222 212456777889999999999999998876544444 6777


Q ss_pred             ccC
Q 023259          248 PFS  250 (285)
Q Consensus       248 ~F~  250 (285)
                      +|-
T Consensus       353 ~~~  355 (574)
T COG3882         353 EFP  355 (574)
T ss_pred             cCC
Confidence            773

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=96.55  E-value=0.0063  Score=48.03  Aligned_cols=38  Identities=18%  Similarity=0.230  Sum_probs=28.8

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023259          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (285)
Q Consensus       155 RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~  192 (285)
                      =||+.+||+.|.+. ..+++.|+++..-...+.++|..-
T Consensus        16 ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~   54 (101)
T PF13344_consen   16 IPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKL   54 (101)
T ss_dssp             -TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHT
T ss_pred             CcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhc
Confidence            59999999999988 999999999876666666666433

...

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=96.44  E-value=0.0069  Score=52.42  Aligned_cols=113  Identities=22%  Similarity=0.243  Sum_probs=81.9

Q ss_pred             ccCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-
Q 023259           90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-  168 (285)
Q Consensus        90 ~~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-  168 (285)
                      ...+.+.+|+|||+|||-=.  .                                       -..-|-+.+-+..+++. 
T Consensus        24 ~~~Gikgvi~DlDNTLv~wd--~---------------------------------------~~~tpe~~~W~~e~k~~g   62 (175)
T COG2179          24 KAHGIKGVILDLDNTLVPWD--N---------------------------------------PDATPELRAWLAELKEAG   62 (175)
T ss_pred             HHcCCcEEEEeccCceeccc--C---------------------------------------CCCCHHHHHHHHHHHhcC
Confidence            34578999999999999511  0                                       01357888999999988 


Q ss_pred             ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccc-cCCCCCe---e
Q 023259          169 ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSF-LLQPLNG---I  244 (285)
Q Consensus       169 yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~-~~~p~Ng---I  244 (285)
                      ..++|.|++.+.-+..++..+|...+     ++-.-.+  ...+.|.|..++-+.++|+.|=|...-= .....+|   |
T Consensus        63 i~v~vvSNn~e~RV~~~~~~l~v~fi-----~~A~KP~--~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tI  135 (175)
T COG2179          63 IKVVVVSNNKESRVARAAEKLGVPFI-----YRAKKPF--GRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTI  135 (175)
T ss_pred             CEEEEEeCCCHHHHHhhhhhcCCcee-----ecccCcc--HHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEE
Confidence            99999999999999999999987632     1111111  1367788999999999999999988642 2233344   5


Q ss_pred             eeCccC
Q 023259          245 PCIPFS  250 (285)
Q Consensus       245 ~I~~F~  250 (285)
                      .|.|-.
T Consensus       136 lV~Pl~  141 (175)
T COG2179         136 LVEPLV  141 (175)
T ss_pred             EEEEec
Confidence            666654

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=96.41  E-value=0.0061  Score=53.47  Aligned_cols=99  Identities=15%  Similarity=0.131  Sum_probs=65.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCc----hh--------hHHHHHHHhcCCC-ceeEEEecCc-----ccccCC--c
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGL----EG--------YARPLVDRIDGEN-LFSLRLYRPS-----TTSTEY--R  210 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~----~~--------YA~~Vl~~LDp~~-~f~~~l~r~~-----c~~~k~--~  210 (285)
                      ..+.||+.+=|..+.+. |.++|+|+-+    ..        +-+.++..+...+ .|+.+++|.+     |...|+  +
T Consensus        30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~g  109 (181)
T COG0241          30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPG  109 (181)
T ss_pred             hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChH
Confidence            34689999999999888 9999999832    22        2233444554444 5889998776     333333  3


Q ss_pred             cccccccccCCCCCcEEEEECCcccccCCCCC---eeeeCccC
Q 023259          211 EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLN---GIPCIPFS  250 (285)
Q Consensus       211 ~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~N---gI~I~~F~  250 (285)
                      .+..-++..+.|+++.++|=|+..-..+....   ++.+..+.
T Consensus       110 m~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~  152 (181)
T COG0241         110 MLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGI  152 (181)
T ss_pred             HHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCc
Confidence            45566666778999999999997554433322   44444444

>PRK11590 hypothetical protein; Provisional

Probab=96.36  E-value=0.0017  Score=57.41  Aligned_cols=39  Identities=23%  Similarity=0.123  Sum_probs=34.4

Q ss_pred             EeeCccHHHHH-HHhhh-cceEEEEccCchhhHHHHHHHhc
Q 023259          152 VFERPGLREFL-KQLSE-FADLILFTAGLEGYARPLVDRID  190 (285)
Q Consensus       152 V~~RPgl~eFL-~~ls~-~yeIvI~Ta~~~~YA~~Vl~~LD  190 (285)
                      +..+||+.+.| +.+++ -+.++|-|++...+++++++.+.
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~  134 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP  134 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence            45689999999 57875 49999999999999999999877

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=96.36  E-value=0.014  Score=48.28  Aligned_cols=49  Identities=6%  Similarity=0.061  Sum_probs=36.1

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHH------------HHHHHhcCCCc-eeEEEecC
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYAR------------PLVDRIDGENL-FSLRLYRP  202 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~------------~Vl~~LDp~~~-f~~~l~r~  202 (285)
                      ..+.+.+.|+.+.+. +++++.|+-......            .+.+.|+..+. +..++.+.
T Consensus        25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~k   87 (126)
T TIGR01689        25 PILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEIYVGK   87 (126)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceEEeCC
Confidence            578889999999765 999999998887766            66666766653 45555544

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.16  E-value=0.013  Score=53.78  Aligned_cols=40  Identities=20%  Similarity=0.086  Sum_probs=33.9

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc
Q 023259          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL  194 (285)
Q Consensus       155 RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~  194 (285)
                      .|...+.|+.|.+. ..++|-|......+..+++.++...+
T Consensus        23 ~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~   63 (273)
T PRK00192         23 YEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDP   63 (273)
T ss_pred             cHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Confidence            46678899999988 99999999999999999999876543

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=96.15  E-value=0.0038  Score=53.99  Aligned_cols=75  Identities=9%  Similarity=0.045  Sum_probs=55.8

Q ss_pred             hcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccCCCCCeeee
Q 023259          167 EFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       167 ~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I  246 (285)
                      +.+.++|.|+....+++.+++.+....+|...       ..+...+.+-++.++.+.++++.|-|+..-.......|+.+
T Consensus        49 ~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~-------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~  121 (169)
T TIGR02726        49 CGIDVAIITSKKSGAVRHRAEELKIKRFHEGI-------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAV  121 (169)
T ss_pred             CCCEEEEEECCCcHHHHHHHHHCCCcEEEecC-------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeE
Confidence            34999999999999999999999888776532       12223556667778888999999999987765544455444


Q ss_pred             Cc
Q 023259          247 IP  248 (285)
Q Consensus       247 ~~  248 (285)
                      -.
T Consensus       122 am  123 (169)
T TIGR02726       122 AV  123 (169)
T ss_pred             EC
Confidence            33

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=96.10  E-value=0.024  Score=49.19  Aligned_cols=96  Identities=16%  Similarity=0.197  Sum_probs=62.1

Q ss_pred             ccCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhcc
Q 023259           90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFA  169 (285)
Q Consensus        90 ~~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~y  169 (285)
                      ...+-+.||||+|+||+.-+..                                         ..-|.+.+.+++|++.|
T Consensus        37 k~~Gik~li~DkDNTL~~~~~~-----------------------------------------~i~~~~~~~~~~l~~~~   75 (168)
T PF09419_consen   37 KKKGIKALIFDKDNTLTPPYED-----------------------------------------EIPPEYAEWLNELKKQF   75 (168)
T ss_pred             hhcCceEEEEcCCCCCCCCCcC-----------------------------------------cCCHHHHHHHHHHHHHC
Confidence            4568899999999999953210                                         13577888899999875


Q ss_pred             ---eEEEEccCc-------hhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccC-----CCCCcEEEEECCcc
Q 023259          170 ---DLILFTAGL-------EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLS-----KDLCRTLIVDNNPF  234 (285)
Q Consensus       170 ---eIvI~Ta~~-------~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lg-----rdl~~vVIVDDs~~  234 (285)
                         .|+|.|++.       ..-|+.+-+.++.. .+.+.--       |.+.+.+-++.++     ..++++++|-|...
T Consensus        76 ~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp-vl~h~~k-------KP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~  147 (168)
T PF09419_consen   76 GKDRVLIVSNSAGSSDDPDGERAEALEKALGIP-VLRHRAK-------KPGCFREILKYFKCQKVVTSPSEIAVIGDRLF  147 (168)
T ss_pred             CCCeEEEEECCCCcccCccHHHHHHHHHhhCCc-EEEeCCC-------CCccHHHHHHHHhhccCCCCchhEEEEcchHH
Confidence               399999983       56677777777632 2222211       2222222233332     35899999999875

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=96.07  E-value=0.014  Score=54.55  Aligned_cols=86  Identities=13%  Similarity=0.196  Sum_probs=59.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC----CceeEEEec-C-cccccCCc----cccc------
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE----NLFSLRLYR-P-STTSTEYR----EHVK------  214 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~----~~f~~~l~r-~-~c~~~k~~----~~~K------  214 (285)
                      +.+|||+.+||+.|.+. ..++|+|+|...+++.+++.++..    ..++.++-- + .+.....+    .+.|      
T Consensus       120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~  199 (277)
T TIGR01544       120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVAL  199 (277)
T ss_pred             CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHH
Confidence            77899999999999988 999999999999999999987653    233444332 2 22111111    1222      


Q ss_pred             -cccccC--CCCCcEEEEECCccccc
Q 023259          215 -DLSCLS--KDLCRTLIVDNNPFSFL  237 (285)
Q Consensus       215 -dL~~Lg--rdl~~vVIVDDs~~~~~  237 (285)
                       ..+.++  .+.+++|+|.|+..-..
T Consensus       200 ~~~~~~~~~~~~~~vI~vGDs~~Dl~  225 (277)
T TIGR01544       200 RNTEYFNQLKDRSNIILLGDSQGDLR  225 (277)
T ss_pred             HHHHHhCccCCcceEEEECcChhhhh
Confidence             222345  67899999999987654

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=95.88  E-value=0.02  Score=51.82  Aligned_cols=59  Identities=22%  Similarity=0.237  Sum_probs=48.9

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023259           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL  171 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-yeI  171 (285)
                      ..+.+++||||||+.+.+.                                          ..|...+.|+++.+. ..+
T Consensus         2 ~~kli~~DlDGTLl~~~~~------------------------------------------i~~~~~~al~~~~~~g~~v   39 (264)
T COG0561           2 MIKLLAFDLDGTLLDSNKT------------------------------------------ISPETKEALARLREKGVKV   39 (264)
T ss_pred             CeeEEEEcCCCCccCCCCc------------------------------------------cCHHHHHHHHHHHHCCCEE
Confidence            3688999999999985211                                          367778889988766 999


Q ss_pred             EEEccCchhhHHHHHHHhcCCC
Q 023259          172 ILFTAGLEGYARPLVDRIDGEN  193 (285)
Q Consensus       172 vI~Ta~~~~YA~~Vl~~LDp~~  193 (285)
                      +|-|......+.++++.|....
T Consensus        40 ~iaTGR~~~~~~~~~~~l~~~~   61 (264)
T COG0561          40 VLATGRPLPDVLSILEELGLDG   61 (264)
T ss_pred             EEECCCChHHHHHHHHHcCCCc
Confidence            9999999999999999998876

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=95.69  E-value=0.03  Score=49.24  Aligned_cols=39  Identities=18%  Similarity=0.141  Sum_probs=31.8

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023259          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (285)
Q Consensus       155 RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~  193 (285)
                      -|...+-|+++.+. +.+++-|......++.+.+.++...
T Consensus        20 ~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~   59 (215)
T TIGR01487        20 SERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG   59 (215)
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence            45667778888877 8899999998888899888887764

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=95.64  E-value=0.019  Score=50.70  Aligned_cols=93  Identities=13%  Similarity=0.172  Sum_probs=61.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce-eE--EEecCcccccCCc--c----------cccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-SL--RLYRPSTTSTEYR--E----------HVKD  215 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f-~~--~l~r~~c~~~k~~--~----------~~Kd  215 (285)
                      +..|||+.+||+.+.+. +.++|.|++...+++.+++.+.....+ ..  .+..+.....+..  .          -.+-
T Consensus        69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~  148 (214)
T TIGR03333        69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSL  148 (214)
T ss_pred             CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHH
Confidence            68999999999999987 999999999999999999998543333 21  2221111111000  0          1233


Q ss_pred             ccccCCCCCcEEEEECCcccccCCCCCee
Q 023259          216 LSCLSKDLCRTLIVDNNPFSFLLQPLNGI  244 (285)
Q Consensus       216 L~~Lgrdl~~vVIVDDs~~~~~~~p~NgI  244 (285)
                      ++.++...+++|.|-|+..-+......++
T Consensus       149 l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~  177 (214)
T TIGR03333       149 IRKLSEPNDYHIVIGDSVTDVEAAKQSDL  177 (214)
T ss_pred             HHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence            34445567889999999887654444443

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=95.55  E-value=0.016  Score=52.77  Aligned_cols=53  Identities=21%  Similarity=0.345  Sum_probs=45.5

Q ss_pred             EeeCccHHHHHHHhhh---cceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcc
Q 023259          152 VFERPGLREFLKQLSE---FADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPST  204 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~---~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c  204 (285)
                      +..-||..+|++.+++   .++++|-|.+..-|.+.+++.-+....|+.+++-..+
T Consensus        70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~  125 (234)
T PF06888_consen   70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPAC  125 (234)
T ss_pred             CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCce
Confidence            6789999999999954   4999999999999999999999988877776655444

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=95.51  E-value=0.052  Score=47.94  Aligned_cols=42  Identities=26%  Similarity=0.621  Sum_probs=38.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~  193 (285)
                      +..|||..+|.+.+.++ -.++|-|+|+..|..++++.|.-+.
T Consensus        72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke  114 (220)
T COG4359          72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKE  114 (220)
T ss_pred             cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhcccc
Confidence            77899999999999999 9999999999999999999997544

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=95.44  E-value=0.042  Score=48.39  Aligned_cols=39  Identities=18%  Similarity=0.202  Sum_probs=27.1

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023259          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (285)
Q Consensus       155 RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~  193 (285)
                      .|...+-|+++.+. ..++|-|.-....+..+++.+....
T Consensus        22 ~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   61 (230)
T PRK01158         22 SLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG   61 (230)
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence            34455667777766 6777777777777777777776554

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=95.43  E-value=0.053  Score=49.10  Aligned_cols=37  Identities=11%  Similarity=0.162  Sum_probs=29.6

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~  192 (285)
                      |...+-|+++.+. ..++|-|.-....+..+++.++..
T Consensus        23 ~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   60 (270)
T PRK10513         23 PAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHME   60 (270)
T ss_pred             HHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCC
Confidence            3455778888887 889999988888888888888754

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=95.40  E-value=0.036  Score=48.31  Aligned_cols=38  Identities=24%  Similarity=0.260  Sum_probs=30.2

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023259          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (285)
Q Consensus       155 RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~  192 (285)
                      -|...+.|+.+.+. ..+++.|.-....+..+++.+...
T Consensus        17 ~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~   55 (254)
T PF08282_consen   17 SPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID   55 (254)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred             CHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence            35567788888866 889999998888888888877654

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PLN02645 phosphoglycolate phosphatase

Probab=95.21  E-value=0.037  Score=52.04  Aligned_cols=35  Identities=17%  Similarity=0.253  Sum_probs=29.1

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhc
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID  190 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LD  190 (285)
                      ||+.++|+.|.+. ..+++.|+....-...+++++.
T Consensus        47 ~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~   82 (311)
T PLN02645         47 EGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFE   82 (311)
T ss_pred             cCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHH
Confidence            8999999999977 9999999988777666666554

>PRK10444 UMP phosphatase; Provisional

Probab=95.16  E-value=0.042  Score=50.20  Aligned_cols=37  Identities=27%  Similarity=0.393  Sum_probs=30.5

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcC
Q 023259          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDG  191 (285)
Q Consensus       155 RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp  191 (285)
                      =||..++|+.|.+. ..+++.|++...-...++++|..
T Consensus        19 ~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~   56 (248)
T PRK10444         19 VPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT   56 (248)
T ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence            58899999999977 88999999988777777777643

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=95.09  E-value=0.063  Score=48.44  Aligned_cols=15  Identities=40%  Similarity=0.525  Sum_probs=13.1

Q ss_pred             ceEEEEeCCCccccc
Q 023259           94 KLTVVLDLDETLVCA  108 (285)
Q Consensus        94 k~tLVLDLD~TLV~s  108 (285)
                      .+.+++||||||++.
T Consensus         3 ~kli~~DlDGTLl~~   17 (272)
T PRK10530          3 YRVIALDLDGTLLTP   17 (272)
T ss_pred             ccEEEEeCCCceECC
Confidence            478999999999974

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=95.08  E-value=0.056  Score=49.22  Aligned_cols=15  Identities=27%  Similarity=0.388  Sum_probs=12.9

Q ss_pred             ceEEEEeCCCccccc
Q 023259           94 KLTVVLDLDETLVCA  108 (285)
Q Consensus        94 k~tLVLDLD~TLV~s  108 (285)
                      .+++++||||||+.+
T Consensus         2 ~kli~~DlDGTLl~~   16 (272)
T PRK15126          2 ARLAAFDMDGTLLMP   16 (272)
T ss_pred             ccEEEEeCCCcCcCC
Confidence            468899999999974

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=94.98  E-value=0.056  Score=48.71  Aligned_cols=38  Identities=18%  Similarity=0.246  Sum_probs=27.2

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023259          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (285)
Q Consensus       155 RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~  192 (285)
                      -|...+.|+++.+. ..++|-|......+..+++.++..
T Consensus        18 ~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~   56 (256)
T TIGR00099        18 SPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD   56 (256)
T ss_pred             CHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            34456677777766 778888888777777777777654

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=94.97  E-value=0.065  Score=47.13  Aligned_cols=35  Identities=20%  Similarity=0.165  Sum_probs=30.8

Q ss_pred             HHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023259          158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (285)
Q Consensus       158 l~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~  192 (285)
                      ..+.|+.+.+. ..+++.|......+..+++.++..
T Consensus        21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~   56 (221)
T TIGR02463        21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT   56 (221)
T ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            57888888877 899999999999999999998754

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=94.96  E-value=0.039  Score=46.35  Aligned_cols=84  Identities=23%  Similarity=0.375  Sum_probs=57.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCc------------ccccCC-cccccc-c
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPS------------TTSTEY-REHVKD-L  216 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~------------c~~~k~-~~~~Kd-L  216 (285)
                      +..+||+.++|+.+.+. +.++|.|++...+++.+++.++...++...+..+.            |..... ...++. +
T Consensus        72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~  151 (177)
T TIGR01488        72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL  151 (177)
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence            55799999999999887 99999999999999999999987766655543321            100000 011122 2


Q ss_pred             cccCCCCCcEEEEECCccc
Q 023259          217 SCLSKDLCRTLIVDNNPFS  235 (285)
Q Consensus       217 ~~Lgrdl~~vVIVDDs~~~  235 (285)
                      +..+.+.++++.|-|+..-
T Consensus       152 ~~~~~~~~~~~~iGDs~~D  170 (177)
T TIGR01488       152 EESKITLKKIIAVGDSVND  170 (177)
T ss_pred             HHhCCCHHHEEEEeCCHHH
Confidence            2335567788999887654

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=94.94  E-value=0.061  Score=48.24  Aligned_cols=37  Identities=14%  Similarity=0.201  Sum_probs=30.9

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~  192 (285)
                      |...++|+++.+. ..+++.|.-+..-+..+++.++..
T Consensus        18 ~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~   55 (225)
T TIGR02461        18 GPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE   55 (225)
T ss_pred             hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            4578899999987 899999988888888888888754

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PRK10976 putative hydrolase; Provisional

Probab=94.87  E-value=0.07  Score=48.28  Aligned_cols=15  Identities=40%  Similarity=0.423  Sum_probs=13.0

Q ss_pred             ceEEEEeCCCccccc
Q 023259           94 KLTVVLDLDETLVCA  108 (285)
Q Consensus        94 k~tLVLDLD~TLV~s  108 (285)
                      .+.+++||||||+++
T Consensus         2 ikli~~DlDGTLl~~   16 (266)
T PRK10976          2 YQVVASDLDGTLLSP   16 (266)
T ss_pred             ceEEEEeCCCCCcCC
Confidence            368999999999975

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=94.86  E-value=0.067  Score=48.92  Aligned_cols=35  Identities=20%  Similarity=0.254  Sum_probs=27.4

Q ss_pred             HHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023259          158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (285)
Q Consensus       158 l~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~  192 (285)
                      ..+-|+++.+. ..++|.|.-....+..+++.++..
T Consensus        29 ~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~   64 (271)
T PRK03669         29 AAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ   64 (271)
T ss_pred             HHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence            44667778777 888888888888888888888754

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=94.76  E-value=0.055  Score=49.49  Aligned_cols=35  Identities=23%  Similarity=0.353  Sum_probs=26.1

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh
Q 023259          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI  189 (285)
Q Consensus       155 RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~L  189 (285)
                      =||..++|+.|.+. ..+++.|+....-...+.+++
T Consensus        23 ~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l   58 (257)
T TIGR01458        23 VPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL   58 (257)
T ss_pred             CCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence            57999999999988 999999987665444444443

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]

Probab=94.69  E-value=0.097  Score=44.40  Aligned_cols=83  Identities=14%  Similarity=0.193  Sum_probs=55.1

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhh--HHHHHHHhcCC-Cce--eEEEecCcccccCCccccccccccCCCCCcE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGY--ARPLVDRIDGE-NLF--SLRLYRPSTTSTEYREHVKDLSCLSKDLCRT  226 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~Y--A~~Vl~~LDp~-~~f--~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~v  226 (285)
                      ...-||+++-+++|-++|+++|-|+++..+  .+.-.+-|--. .++  +++++|..          |++-      +-=
T Consensus        67 L~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn----------Kniv------kaD  130 (180)
T COG4502          67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN----------KNIV------KAD  130 (180)
T ss_pred             cCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC----------CCeE------Eee
Confidence            456799999999999999999999995433  33333333221 111  34555543          2221      123


Q ss_pred             EEEECCcccccCCCCCeeeeCccC
Q 023259          227 LIVDNNPFSFLLQPLNGIPCIPFS  250 (285)
Q Consensus       227 VIVDDs~~~~~~~p~NgI~I~~F~  250 (285)
                      ++|||+|.......+|-|.-..=+
T Consensus       131 ilIDDnp~nLE~F~G~kIlFdA~H  154 (180)
T COG4502         131 ILIDDNPLNLENFKGNKILFDAHH  154 (180)
T ss_pred             EEecCCchhhhhccCceEEEeccc
Confidence            799999999988889988766654

>smart00775 LNS2 LNS2 domain

Probab=94.46  E-value=0.085  Score=44.86  Aligned_cols=36  Identities=19%  Similarity=0.404  Sum_probs=28.9

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHH---HHHHHh
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYAR---PLVDRI  189 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~---~Vl~~L  189 (285)
                      ..|++.++++.+.+. |.+++.|+.....+.   ..++.+
T Consensus        28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~   67 (157)
T smart00775       28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI   67 (157)
T ss_pred             CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence            479999999999988 888888888777664   666664

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=94.29  E-value=0.13  Score=48.60  Aligned_cols=36  Identities=19%  Similarity=0.241  Sum_probs=29.0

Q ss_pred             HHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023259          158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (285)
Q Consensus       158 l~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~  193 (285)
                      ..+-|+.|.+. ..+++.|.-+..-+..+.+.+....
T Consensus        23 a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~   59 (302)
T PRK12702         23 ARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH   59 (302)
T ss_pred             HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence            56778888877 8888888888888888888887653

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=94.19  E-value=0.11  Score=47.78  Aligned_cols=35  Identities=17%  Similarity=0.225  Sum_probs=24.6

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh
Q 023259          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI  189 (285)
Q Consensus       155 RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~L  189 (285)
                      =||+.++|++|.+. ..+++.|+++..-...+++++
T Consensus        20 ~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l   55 (279)
T TIGR01452        20 VPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKF   55 (279)
T ss_pred             CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence            47889999999976 889999986544333333333

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=94.00  E-value=0.12  Score=45.30  Aligned_cols=33  Identities=21%  Similarity=0.295  Sum_probs=20.0

Q ss_pred             HHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhc
Q 023259          158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRID  190 (285)
Q Consensus       158 l~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LD  190 (285)
                      ..+-|+++.+. ..+++-|.-....+..+++.++
T Consensus        20 ~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~   53 (225)
T TIGR01482        20 ALEAIRKAESVGIPVVLVTGNSVQFARALAKLIG   53 (225)
T ss_pred             HHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhC
Confidence            34455566555 6666666666666666666665

catalyze the same reaction as SPP.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=93.93  E-value=0.096  Score=49.48  Aligned_cols=36  Identities=19%  Similarity=0.270  Sum_probs=23.7

Q ss_pred             CccHHHHHHHhhh-----cceEEEEccCc----hhhHHHHHHHhc
Q 023259          155 RPGLREFLKQLSE-----FADLILFTAGL----EGYARPLVDRID  190 (285)
Q Consensus       155 RPgl~eFL~~ls~-----~yeIvI~Ta~~----~~YA~~Vl~~LD  190 (285)
                      -||+.++|+.+..     ...+.+.|++.    +.+++.+.++++
T Consensus        18 i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG   62 (321)
T TIGR01456        18 IAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLG   62 (321)
T ss_pred             cHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcC
Confidence            5777888888876     57778888775    344555544443

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=93.92  E-value=0.11  Score=47.09  Aligned_cols=36  Identities=22%  Similarity=0.212  Sum_probs=30.4

Q ss_pred             cHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023259          157 GLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (285)
Q Consensus       157 gl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~  192 (285)
                      ...+.++.+.+. ..+++-|.-....+..+++.++..
T Consensus        20 ~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~   56 (256)
T TIGR01486        20 PAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE   56 (256)
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            467899999988 889999988888899999988753

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=93.75  E-value=0.15  Score=46.36  Aligned_cols=34  Identities=12%  Similarity=0.265  Sum_probs=22.6

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI  189 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~L  189 (285)
                      |+..++|++|.+. ..+++.|+++..-.+.+.+++
T Consensus        20 ~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l   54 (249)
T TIGR01457        20 PEAETFVHELQKRDIPYLFVTNNSTRTPESVAEML   54 (249)
T ss_pred             cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence            6788999999877 888888875433333333333

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=93.66  E-value=0.054  Score=46.72  Aligned_cols=89  Identities=16%  Similarity=0.138  Sum_probs=61.6

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEec-Cc-ccccC-C-----c-----ccccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYR-PS-TTSTE-Y-----R-----EHVKDLS  217 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r-~~-c~~~k-~-----~-----~~~KdL~  217 (285)
                      ...+||+.++|+.+.+. +.++|-|++...+++.+++.++...+|...+.. ++ ....+ .     +     ....-++
T Consensus        86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~  165 (202)
T TIGR01490        86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA  165 (202)
T ss_pred             HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence            35799999999999887 999999999999999999999887777653332 11 11000 0     0     0111123


Q ss_pred             ccCCCCCcEEEEECCcccccCCC
Q 023259          218 CLSKDLCRTLIVDNNPFSFLLQP  240 (285)
Q Consensus       218 ~Lgrdl~~vVIVDDs~~~~~~~p  240 (285)
                      ..+.+.++++.+-|+..-.....
T Consensus       166 ~~~~~~~~~~~~gDs~~D~~~~~  188 (202)
T TIGR01490       166 EEQIDLKDSYAYGDSISDLPLLS  188 (202)
T ss_pred             HcCCCHHHcEeeeCCcccHHHHH
Confidence            34667889999999987765433

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=93.64  E-value=0.14  Score=44.40  Aligned_cols=36  Identities=22%  Similarity=0.296  Sum_probs=30.3

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhc
Q 023259          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID  190 (285)
Q Consensus       155 RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LD  190 (285)
                      .|.+.+.|++|.+. ..++|-|......+..+++.++
T Consensus        19 ~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~   55 (204)
T TIGR01484        19 SPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP   55 (204)
T ss_pred             CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence            56778889999887 8899999999999999888743

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=93.37  E-value=0.089  Score=48.34  Aligned_cols=101  Identities=13%  Similarity=0.109  Sum_probs=66.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc-eeEEE-----------ecCcc----------c---
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL-FSLRL-----------YRPST----------T---  205 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~-f~~~l-----------~r~~c----------~---  205 (285)
                      ...=|.+.++++.+++. ..++..|+..+.+...-++.|-..+. |+...           +...+          .   
T Consensus        80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~  159 (252)
T PF11019_consen   80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG  159 (252)
T ss_pred             EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence            55678999999999977 99999999999999888887754331 22211           11110          0   


Q ss_pred             -ccCCccccccccccCCCCCcEEEEECCccccc----CCCCCeeeeCccCCC
Q 023259          206 -STEYREHVKDLSCLSKDLCRTLIVDNNPFSFL----LQPLNGIPCIPFSAG  252 (285)
Q Consensus       206 -~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~----~~p~NgI~I~~F~~g  252 (285)
                       ..+......=|..+|..++++|+|||+.....    .....+|..--|+..
T Consensus       160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt  211 (252)
T PF11019_consen  160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYT  211 (252)
T ss_pred             CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEc
Confidence             00101223445667999999999999998653    244466665555544

The function is not known.

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=93.37  E-value=0.039  Score=50.42  Aligned_cols=90  Identities=10%  Similarity=-0.059  Sum_probs=70.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      ....+-+ ++|+.+++. +.|++.|+....+= .++..++...+|++++..-.....|..  .|.+-|++++..++.+|.
T Consensus       113 ~~~~~~~-~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vh  190 (237)
T KOG3085|consen  113 KYLDGMQ-ELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVH  190 (237)
T ss_pred             eeccHHH-HHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEE
Confidence            3344444 999999988 89999999998876 778888888889988875554555543  788999999999999999


Q ss_pred             EECCccc-ccCCCCCe
Q 023259          229 VDNNPFS-FLLQPLNG  243 (285)
Q Consensus       229 VDDs~~~-~~~~p~Ng  243 (285)
                      |||+..+ +.....-|
T Consensus       191 IgD~l~nD~~gA~~~G  206 (237)
T KOG3085|consen  191 IGDLLENDYEGARNLG  206 (237)
T ss_pred             ecCccccccHhHHHcC
Confidence            9999988 55444333

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=93.27  E-value=0.31  Score=50.80  Aligned_cols=64  Identities=19%  Similarity=0.171  Sum_probs=46.2

Q ss_pred             cccccCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhh
Q 023259           87 VSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLS  166 (285)
Q Consensus        87 ~~~~~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls  166 (285)
                      .+.....++.+++||||||++....                                        +.  +-..+-|+.+.
T Consensus       409 ~~~~~~~~KLIfsDLDGTLLd~d~~----------------------------------------i~--~~t~eAL~~L~  446 (694)
T PRK14502        409 LPSSGQFKKIVYTDLDGTLLNPLTY----------------------------------------SY--STALDALRLLK  446 (694)
T ss_pred             CCCcCceeeEEEEECcCCCcCCCCc----------------------------------------cC--HHHHHHHHHHH
Confidence            3344567889999999999974210                                        11  12355677888


Q ss_pred             hc-ceEEEEccCchhhHHHHHHHhcCC
Q 023259          167 EF-ADLILFTAGLEGYARPLVDRIDGE  192 (285)
Q Consensus       167 ~~-yeIvI~Ta~~~~YA~~Vl~~LDp~  192 (285)
                      +. ..+++-|.-....+..+++.++..
T Consensus       447 ekGI~~VIATGRs~~~i~~l~~~Lgl~  473 (694)
T PRK14502        447 DKELPLVFCSAKTMGEQDLYRNELGIK  473 (694)
T ss_pred             HcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            77 888999998888888888888754

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=92.93  E-value=0.18  Score=46.92  Aligned_cols=37  Identities=24%  Similarity=0.326  Sum_probs=31.2

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcC
Q 023259          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDG  191 (285)
Q Consensus       155 RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp  191 (285)
                      =||+.+||++|.+. -.+++-|+++..-.+.+.++|..
T Consensus        26 ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~   63 (269)
T COG0647          26 IPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSS   63 (269)
T ss_pred             CchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHh
Confidence            48999999999988 88999999988777767666654

>PTZ00174 phosphomannomutase; Provisional

Probab=92.91  E-value=0.24  Score=44.83  Aligned_cols=16  Identities=31%  Similarity=0.476  Sum_probs=13.8

Q ss_pred             CceEEEEeCCCccccc
Q 023259           93 QKLTVVLDLDETLVCA  108 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s  108 (285)
                      ..+.+++||||||+++
T Consensus         4 ~~klia~DlDGTLL~~   19 (247)
T PTZ00174          4 KKTILLFDVDGTLTKP   19 (247)
T ss_pred             CCeEEEEECcCCCcCC
Confidence            3678999999999975

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=92.75  E-value=0.04  Score=49.88  Aligned_cols=55  Identities=16%  Similarity=0.315  Sum_probs=46.1

Q ss_pred             EeeCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccc
Q 023259          152 VFERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS  206 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~--yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~  206 (285)
                      +..-||+-+.++.+++.  ||++|-|.+..-+.+.+++..+...+|+.+++-..|..
T Consensus        83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~d  139 (256)
T KOG3120|consen   83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVD  139 (256)
T ss_pred             CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccC
Confidence            56789999999999977  89999999999999999999987777776665555543

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=92.55  E-value=0.23  Score=44.75  Aligned_cols=32  Identities=28%  Similarity=0.445  Sum_probs=23.4

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCch----hhHHHHHH
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGLE----GYARPLVD  187 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~~----~YA~~Vl~  187 (285)
                      |++.++|+.+.+. +.+++-|++..    .+++.+.+
T Consensus        17 ~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~   53 (236)
T TIGR01460        17 PGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSS   53 (236)
T ss_pred             cCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence            5888999999877 88999986654    34444444

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01675 plant-AP plant acid phosphatase

Probab=91.92  E-value=0.21  Score=45.48  Aligned_cols=50  Identities=12%  Similarity=0.218  Sum_probs=36.7

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc--eeEEEecC
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL--FSLRLYRP  202 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~--f~~~l~r~  202 (285)
                      ..-|++.+|++.+.+. ++|++.|.-.+...+...+.|...++  +...+.|.
T Consensus       120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~  172 (229)
T TIGR01675       120 PALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRG  172 (229)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecC
Confidence            4679999999999988 99999999888775555555544442  35566664

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PLN02423 phosphomannomutase

Probab=91.41  E-value=0.42  Score=43.37  Aligned_cols=16  Identities=25%  Similarity=0.449  Sum_probs=12.8

Q ss_pred             CceEEEEeCCCccccc
Q 023259           93 QKLTVVLDLDETLVCA  108 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s  108 (285)
                      .|..+++||||||+++
T Consensus         6 ~~~i~~~D~DGTLl~~   21 (245)
T PLN02423          6 PGVIALFDVDGTLTAP   21 (245)
T ss_pred             cceEEEEeccCCCcCC
Confidence            4556669999999974

>PLN02887 hydrolase family protein

Probab=91.29  E-value=0.43  Score=49.03  Aligned_cols=61  Identities=13%  Similarity=0.043  Sum_probs=42.0

Q ss_pred             cccCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc
Q 023259           89 EERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF  168 (285)
Q Consensus        89 ~~~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~  168 (285)
                      ..-.+.+.+++||||||+++.+  .                                        .-|...+-|+++.+.
T Consensus       303 ~~~~~iKLIa~DLDGTLLn~d~--~----------------------------------------Is~~t~eAI~kl~ek  340 (580)
T PLN02887        303 FYKPKFSYIFCDMDGTLLNSKS--Q----------------------------------------ISETNAKALKEALSR  340 (580)
T ss_pred             hhccCccEEEEeCCCCCCCCCC--c----------------------------------------cCHHHHHHHHHHHHC
Confidence            3344677899999999997421  1                                        123345667777776


Q ss_pred             -ceEEEEccCchhhHHHHHHHhcC
Q 023259          169 -ADLILFTAGLEGYARPLVDRIDG  191 (285)
Q Consensus       169 -yeIvI~Ta~~~~YA~~Vl~~LDp  191 (285)
                       ..++|-|.-...-+..+++.++.
T Consensus       341 Gi~~vIATGR~~~~i~~~l~~L~l  364 (580)
T PLN02887        341 GVKVVIATGKARPAVIDILKMVDL  364 (580)
T ss_pred             CCeEEEEcCCCHHHHHHHHHHhCc
Confidence             77778787777777777777764

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=90.76  E-value=0.39  Score=43.26  Aligned_cols=36  Identities=14%  Similarity=-0.017  Sum_probs=20.0

Q ss_pred             CccHHHHHHHhhhcc-eEEEEccCchhhHHHHHHHhc
Q 023259          155 RPGLREFLKQLSEFA-DLILFTAGLEGYARPLVDRID  190 (285)
Q Consensus       155 RPgl~eFL~~ls~~y-eIvI~Ta~~~~YA~~Vl~~LD  190 (285)
                      .|.+.+.++.+.+.. .+++-|.-+..-++.+++.+.
T Consensus        23 ~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~   59 (249)
T TIGR01485        23 LLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKP   59 (249)
T ss_pred             HHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCC
Confidence            456666666666553 445555555555555555444

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=90.72  E-value=0.43  Score=48.68  Aligned_cols=85  Identities=11%  Similarity=0.093  Sum_probs=61.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVD  230 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVD  230 (285)
                      -..|||+.++|++|++. ++++|-|...+.+++.+++.++.+ +     +. .+........++.+   ..+.++++.|-
T Consensus       404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~-----~~-~~~p~~K~~~v~~l---~~~~~~v~~VG  473 (562)
T TIGR01511       404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-V-----RA-EVLPDDKAALIKEL---QEKGRVVAMVG  473 (562)
T ss_pred             ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-E-----Ec-cCChHHHHHHHHHH---HHcCCEEEEEe
Confidence            45799999999999987 999999999999999999999774 2     22 11111111233333   33568899999


Q ss_pred             CCcccccCCCCCeeee
Q 023259          231 NNPFSFLLQPLNGIPC  246 (285)
Q Consensus       231 Ds~~~~~~~p~NgI~I  246 (285)
                      |...-...-...++.|
T Consensus       474 Dg~nD~~al~~A~vgi  489 (562)
T TIGR01511       474 DGINDAPALAQADVGI  489 (562)
T ss_pred             CCCccHHHHhhCCEEE
Confidence            9988776655555554

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=90.35  E-value=0.12  Score=44.71  Aligned_cols=15  Identities=27%  Similarity=0.463  Sum_probs=12.8

Q ss_pred             EEEEeCCCccccccc
Q 023259           96 TVVLDLDETLVCAYE  110 (285)
Q Consensus        96 tLVLDLD~TLV~s~~  110 (285)
                      .++|||||||+++..
T Consensus         2 ~viFD~DGTLiDs~~   16 (197)
T TIGR01548         2 ALVLDMDGVMADVSQ   16 (197)
T ss_pred             ceEEecCceEEechH
Confidence            589999999999753

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=89.71  E-value=0.63  Score=42.80  Aligned_cols=16  Identities=31%  Similarity=0.337  Sum_probs=13.7

Q ss_pred             CceEEEEeCCCccccc
Q 023259           93 QKLTVVLDLDETLVCA  108 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s  108 (285)
                      .+..+++|+||||+..
T Consensus        13 ~~~li~~D~DGTLl~~   28 (266)
T PRK10187         13 ANYAWFFDLDGTLAEI   28 (266)
T ss_pred             CCEEEEEecCCCCCCC
Confidence            3688999999999974

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=89.59  E-value=0.37  Score=43.52  Aligned_cols=41  Identities=12%  Similarity=0.113  Sum_probs=31.1

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~  193 (285)
                      ..=||..+|++++.+. ++|++-|.-....-+.-++.|...|
T Consensus       115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G  156 (229)
T PF03767_consen  115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAG  156 (229)
T ss_dssp             EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHT
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcC
Confidence            3468999999999999 8888888877776566656555433

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=89.49  E-value=0.54  Score=40.22  Aligned_cols=78  Identities=18%  Similarity=0.202  Sum_probs=59.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC--ceeEEEecCcccccCCccccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN--LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~--~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVI  228 (285)
                      -..||++.++|++|++. +.++|.|......|..+.+.++...  .|....    +. ..+..+.+-++.|+.+.+.|+.
T Consensus       126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~----~k-P~~k~~~~~i~~l~~~~~~v~~  200 (215)
T PF00702_consen  126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDSIVFARVI----GK-PEPKIFLRIIKELQVKPGEVAM  200 (215)
T ss_dssp             EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHE----TT-THHHHHHHHHHHHTCTGGGEEE
T ss_pred             CcchhhhhhhhhhhhccCcceeeeecccccccccccccccccccccccccc----cc-ccchhHHHHHHHHhcCCCEEEE
Confidence            56799999999999998 9999999999999999999998854  222222    11 1112346666778878889999


Q ss_pred             EECCcc
Q 023259          229 VDNNPF  234 (285)
Q Consensus       229 VDDs~~  234 (285)
                      |-|...
T Consensus       201 vGDg~n  206 (215)
T PF00702_consen  201 VGDGVN  206 (215)
T ss_dssp             EESSGG
T ss_pred             EccCHH
Confidence            998763

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=89.12  E-value=0.54  Score=43.24  Aligned_cols=41  Identities=15%  Similarity=0.242  Sum_probs=28.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhh-HHHHHHHhcCC
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGY-ARPLVDRIDGE  192 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~Y-A~~Vl~~LDp~  192 (285)
                      -+.=||+-|||+++-++ -.|+--|+-..+. ...-++.|-..
T Consensus       121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~  163 (274)
T COG2503         121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSE  163 (274)
T ss_pred             cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHc
Confidence            44569999999999999 5555556666655 55556655433

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=88.46  E-value=0.27  Score=42.90  Aligned_cols=17  Identities=29%  Similarity=0.432  Sum_probs=14.0

Q ss_pred             ceEEEEeCCCccccccc
Q 023259           94 KLTVVLDLDETLVCAYE  110 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~~  110 (285)
                      .+.++|||||||+++..
T Consensus         2 ~~~viFDlDGTL~ds~~   18 (221)
T TIGR02253         2 IKAIFFDLDDTLIDTSG   18 (221)
T ss_pred             ceEEEEeCCCCCcCCCC
Confidence            35799999999999753

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=88.26  E-value=0.24  Score=41.77  Aligned_cols=15  Identities=27%  Similarity=0.441  Sum_probs=13.3

Q ss_pred             eEEEEeCCCcccccc
Q 023259           95 LTVVLDLDETLVCAY  109 (285)
Q Consensus        95 ~tLVLDLD~TLV~s~  109 (285)
                      +.++||+||||+++.
T Consensus         2 ~~iiFD~DGTL~ds~   16 (185)
T TIGR02009         2 KAVIFDMDGVIVDTA   16 (185)
T ss_pred             CeEEEcCCCcccCCh
Confidence            578999999999974

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=87.94  E-value=0.84  Score=39.51  Aligned_cols=80  Identities=23%  Similarity=0.313  Sum_probs=45.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchh----hHH---HHHHHhcCCCceeEEEecCcccccCCccccccccccCCCC
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEG----YAR---PLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDL  223 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~----YA~---~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl  223 (285)
                      ...=||+.|.|+.|.+. +++++-|+....    .++   ..+++.-+.-.....++..+          |.  .++.| 
T Consensus        72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~----------K~--~v~~D-  138 (191)
T PF06941_consen   72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD----------KT--LVGGD-  138 (191)
T ss_dssp             --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS----------GG--GC--S-
T ss_pred             CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC----------CC--eEecc-
Confidence            55679999999999998 588877777654    222   23333322211233333221          21  23333 


Q ss_pred             CcEEEEECCcccccCCCCCeeeeC
Q 023259          224 CRTLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       224 ~~vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                         |+|||++.........|+++-
T Consensus       139 ---vlIDD~~~n~~~~~~~g~~~i  159 (191)
T PF06941_consen  139 ---VLIDDRPHNLEQFANAGIPVI  159 (191)
T ss_dssp             ---EEEESSSHHHSS-SSESSEEE
T ss_pred             ---EEecCChHHHHhccCCCceEE
Confidence               899999999887777774443

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=87.68  E-value=0.28  Score=42.35  Aligned_cols=15  Identities=20%  Similarity=0.158  Sum_probs=12.8

Q ss_pred             eEEEEeCCCcccccc
Q 023259           95 LTVVLDLDETLVCAY  109 (285)
Q Consensus        95 ~tLVLDLD~TLV~s~  109 (285)
                      +.|+|||||||+++.
T Consensus         1 k~viFDlDGTL~d~~   15 (203)
T TIGR02252         1 KLITFDAVGTLLALK   15 (203)
T ss_pred             CeEEEecCCceeeeC
Confidence            468999999999863

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=87.39  E-value=0.33  Score=43.63  Aligned_cols=16  Identities=25%  Similarity=0.048  Sum_probs=13.6

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      -+.++||+||||+++.
T Consensus         2 ~k~viFD~DGTLiDs~   17 (253)
T TIGR01422         2 IEAVIFDWAGTTVDFG   17 (253)
T ss_pred             ceEEEEeCCCCeecCC
Confidence            3579999999999963

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=87.35  E-value=0.3  Score=44.45  Aligned_cols=16  Identities=25%  Similarity=0.073  Sum_probs=13.9

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      -+.++||+||||+++.
T Consensus         4 ~k~vIFDlDGTLiDs~   19 (267)
T PRK13478          4 IQAVIFDWAGTTVDFG   19 (267)
T ss_pred             eEEEEEcCCCCeecCC
Confidence            4689999999999973

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=87.32  E-value=0.34  Score=43.77  Aligned_cols=17  Identities=29%  Similarity=0.290  Sum_probs=14.5

Q ss_pred             CceEEEEeCCCcccccc
Q 023259           93 QKLTVVLDLDETLVCAY  109 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s~  109 (285)
                      .-+.++|||||||+++.
T Consensus        21 ~~k~viFDlDGTLiDs~   37 (248)
T PLN02770         21 PLEAVLFDVDGTLCDSD   37 (248)
T ss_pred             ccCEEEEcCCCccCcCH
Confidence            35689999999999975

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=87.20  E-value=0.4  Score=42.42  Aligned_cols=93  Identities=16%  Similarity=0.137  Sum_probs=69.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHH----HhcCCCceeEEEecCcccccCCccccccccccCCCCCcE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVD----RIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRT  226 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~----~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~v  226 (285)
                      -.+=|.+-+++++-.+. ..++|||+|+-. |+++.-    ..|..++|+..+....-...+...|.|.+..+|-++..+
T Consensus       102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~-AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~ei  180 (229)
T COG4229         102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVK-AQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAEI  180 (229)
T ss_pred             cccCHhHHHHHHHHHHcCCcEEEEcCCCch-hHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCchhe
Confidence            45668899999998877 999999999754 444332    335556777766554433344458999999999999999


Q ss_pred             EEEECCcccccCCCCCeee
Q 023259          227 LIVDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       227 VIVDDs~~~~~~~p~NgI~  245 (285)
                      +++-|++.......+-|+.
T Consensus       181 lFLSDn~~EL~AA~~vGl~  199 (229)
T COG4229         181 LFLSDNPEELKAAAGVGLA  199 (229)
T ss_pred             EEecCCHHHHHHHHhcchh
Confidence            9999999988766666654

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=87.12  E-value=0.3  Score=43.79  Aligned_cols=16  Identities=31%  Similarity=0.343  Sum_probs=13.8

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      -+.++|||||||+++.
T Consensus        10 ~k~iiFDlDGTL~D~~   25 (238)
T PRK10748         10 ISALTFDLDDTLYDNR   25 (238)
T ss_pred             ceeEEEcCcccccCCh
Confidence            4689999999999963

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=86.72  E-value=0.93  Score=43.65  Aligned_cols=53  Identities=23%  Similarity=0.316  Sum_probs=44.9

Q ss_pred             eEEEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh-c-------CCCceeEEEec
Q 023259          149 HVTVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI-D-------GENLFSLRLYR  201 (285)
Q Consensus       149 ~~~V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~L-D-------p~~~f~~~l~r  201 (285)
                      .-||.+-||+.++|+.|++. ..+.|-|++...|++.+++.+ +       -..+|+.++..
T Consensus       180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~  241 (343)
T TIGR02244       180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVD  241 (343)
T ss_pred             HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeC
Confidence            34688899999999999988 999999999999999999997 5       24577766654

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=86.26  E-value=0.29  Score=41.29  Aligned_cols=15  Identities=33%  Similarity=0.518  Sum_probs=12.7

Q ss_pred             EEEEeCCCccccccc
Q 023259           96 TVVLDLDETLVCAYE  110 (285)
Q Consensus        96 tLVLDLD~TLV~s~~  110 (285)
                      .+|||+||||+++..
T Consensus         1 ~iiFD~DGTL~ds~~   15 (185)
T TIGR01990         1 AVIFDLDGVITDTAE   15 (185)
T ss_pred             CeEEcCCCccccChH
Confidence            379999999999753

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=86.03  E-value=2.2  Score=39.93  Aligned_cols=50  Identities=8%  Similarity=0.145  Sum_probs=36.9

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc--eeEEEecCc
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL--FSLRLYRPS  203 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~--f~~~l~r~~  203 (285)
                      .=|++.+|++++.+. ++|++.|.-.+..-+.=++.|...|+  ....+.|+.
T Consensus       146 Alp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~LiLR~~  198 (275)
T TIGR01680       146 ALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKLILKDP  198 (275)
T ss_pred             CChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcceeeecCC
Confidence            458999999999988 99999998887766666666665564  245566643

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=85.36  E-value=0.32  Score=42.06  Aligned_cols=13  Identities=54%  Similarity=0.652  Sum_probs=11.5

Q ss_pred             EEEeCCCcccccc
Q 023259           97 VVLDLDETLVCAY  109 (285)
Q Consensus        97 LVLDLD~TLV~s~  109 (285)
                      +|||+||||+++.
T Consensus         1 viFD~DGTL~Ds~   13 (213)
T TIGR01449         1 VLFDLDGTLVDSA   13 (213)
T ss_pred             CeecCCCccccCH
Confidence            5899999999974

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=84.96  E-value=0.49  Score=43.94  Aligned_cols=17  Identities=24%  Similarity=0.210  Sum_probs=14.8

Q ss_pred             CceEEEEeCCCcccccc
Q 023259           93 QKLTVVLDLDETLVCAY  109 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s~  109 (285)
                      +-+.+|||+||||+++.
T Consensus        39 ~~k~VIFDlDGTLvDS~   55 (286)
T PLN02779         39 LPEALLFDCDGVLVETE   55 (286)
T ss_pred             CCcEEEEeCceeEEccc
Confidence            45789999999999975

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=84.92  E-value=0.43  Score=40.04  Aligned_cols=13  Identities=38%  Similarity=0.373  Sum_probs=11.6

Q ss_pred             EEEeCCCcccccc
Q 023259           97 VVLDLDETLVCAY  109 (285)
Q Consensus        97 LVLDLD~TLV~s~  109 (285)
                      |+||+||||+++.
T Consensus         2 viFD~DGTL~D~~   14 (175)
T TIGR01493         2 MVFDVYGTLVDVH   14 (175)
T ss_pred             eEEecCCcCcccH
Confidence            7999999999964

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=84.71  E-value=0.48  Score=40.76  Aligned_cols=15  Identities=27%  Similarity=0.222  Sum_probs=12.9

Q ss_pred             eEEEEeCCCcccccc
Q 023259           95 LTVVLDLDETLVCAY  109 (285)
Q Consensus        95 ~tLVLDLD~TLV~s~  109 (285)
                      +.++||+||||+++.
T Consensus         2 k~viFD~dgTLiD~~   16 (198)
T TIGR01428         2 KALVFDVYGTLFDVH   16 (198)
T ss_pred             cEEEEeCCCcCccHH
Confidence            468999999999864

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=84.70  E-value=0.47  Score=41.18  Aligned_cols=15  Identities=33%  Similarity=0.490  Sum_probs=13.2

Q ss_pred             eEEEEeCCCcccccc
Q 023259           95 LTVVLDLDETLVCAY  109 (285)
Q Consensus        95 ~tLVLDLD~TLV~s~  109 (285)
                      +.++||+||||+++.
T Consensus         2 k~viFD~DGTL~d~~   16 (224)
T TIGR02254         2 KTLLFDLDDTILDFQ   16 (224)
T ss_pred             CEEEEcCcCcccccc
Confidence            579999999999964

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=84.65  E-value=0.59  Score=47.29  Aligned_cols=87  Identities=10%  Similarity=0.106  Sum_probs=65.3

Q ss_pred             EeeCccHHHHHHHhhhc-c-eEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEF-A-DLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-y-eIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIV  229 (285)
                      ...|||+.+.|++|++. + +++|-|+..+.+|+.+++.++..++|.....         ..-.+-++.+....++++.|
T Consensus       361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~p---------~~K~~~i~~l~~~~~~v~~v  431 (536)
T TIGR01512       361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELLP---------EDKLEIVKELREKYGPVAMV  431 (536)
T ss_pred             ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccCc---------HHHHHHHHHHHhcCCEEEEE
Confidence            56899999999999988 8 9999999999999999999998776542211         11123444455566899999


Q ss_pred             ECCcccccCCCCCeeeeC
Q 023259          230 DNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I~  247 (285)
                      -|...-.......++-|.
T Consensus       432 GDg~nD~~al~~A~vgia  449 (536)
T TIGR01512       432 GDGINDAPALAAADVGIA  449 (536)
T ss_pred             eCCHHHHHHHHhCCEEEE
Confidence            999887766555555443

.

>TIGR00685 T6PP trehalose-phosphatase

Probab=84.16  E-value=1.2  Score=40.09  Aligned_cols=15  Identities=33%  Similarity=0.366  Sum_probs=13.4

Q ss_pred             CceEEEEeCCCcccc
Q 023259           93 QKLTVVLDLDETLVC  107 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~  107 (285)
                      ++..|+||+||||+.
T Consensus         2 ~~~~l~lD~DGTL~~   16 (244)
T TIGR00685         2 RKRAFFFDYDGTLSE   16 (244)
T ss_pred             CcEEEEEecCccccC
Confidence            578899999999996

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PRK09449 dUMP phosphatase; Provisional

Probab=83.91  E-value=0.52  Score=41.28  Aligned_cols=14  Identities=36%  Similarity=0.344  Sum_probs=12.4

Q ss_pred             ceEEEEeCCCcccc
Q 023259           94 KLTVVLDLDETLVC  107 (285)
Q Consensus        94 k~tLVLDLD~TLV~  107 (285)
                      -+.++|||||||++
T Consensus         3 ~k~iiFDlDGTLid   16 (224)
T PRK09449          3 YDWILFDADETLFH   16 (224)
T ss_pred             ccEEEEcCCCchhc
Confidence            36899999999997

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=83.30  E-value=0.66  Score=40.30  Aligned_cols=14  Identities=21%  Similarity=0.401  Sum_probs=12.7

Q ss_pred             eEEEEeCCCccccc
Q 023259           95 LTVVLDLDETLVCA  108 (285)
Q Consensus        95 ~tLVLDLD~TLV~s  108 (285)
                      +.+||||||||+++
T Consensus         3 k~viFDldGtL~d~   16 (211)
T TIGR02247         3 KAVIFDFGGVLLPS   16 (211)
T ss_pred             eEEEEecCCceecC
Confidence            57999999999986

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=82.38  E-value=2.3  Score=39.54  Aligned_cols=60  Identities=18%  Similarity=0.180  Sum_probs=43.2

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhcce
Q 023259           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFAD  170 (285)
Q Consensus        91 ~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~ye  170 (285)
                      ..+|.+++||.||||......   |.                                  -+..=+++.+.|..|+..+.
T Consensus        15 ~a~~~~~~lDyDGTl~~i~~~---p~----------------------------------~a~~~~~l~~lL~~Las~~~   57 (266)
T COG1877          15 NARKRLLFLDYDGTLTEIVPH---PE----------------------------------AAVPDDRLLSLLQDLASDPR   57 (266)
T ss_pred             cccceEEEEeccccccccccC---cc----------------------------------ccCCCHHHHHHHHHHHhcCC
Confidence            347889999999999974211   11                                  02345778899999999988


Q ss_pred             --EEEEccCchhhHHHHHH
Q 023259          171 --LILFTAGLEGYARPLVD  187 (285)
Q Consensus       171 --IvI~Ta~~~~YA~~Vl~  187 (285)
                        ++|.|--+..-.+..+.
T Consensus        58 ~~v~iiSGR~~~~l~~~~~   76 (266)
T COG1877          58 NVVAIISGRSLAELERLFG   76 (266)
T ss_pred             CeEEEEeCCCHHHHHHhcC
Confidence              77777777777766666

>PLN03017 trehalose-phosphatase

Probab=82.30  E-value=2.2  Score=41.49  Aligned_cols=17  Identities=35%  Similarity=0.448  Sum_probs=13.9

Q ss_pred             cCCceEEEEeCCCcccc
Q 023259           91 RLQKLTVVLDLDETLVC  107 (285)
Q Consensus        91 ~~~k~tLVLDLD~TLV~  107 (285)
                      ..++..|+||+||||+-
T Consensus       108 ~~k~~llflD~DGTL~P  124 (366)
T PLN03017        108 RGKQIVMFLDYDGTLSP  124 (366)
T ss_pred             cCCCeEEEEecCCcCcC
Confidence            34678889999999993

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=82.23  E-value=1.1  Score=45.57  Aligned_cols=86  Identities=12%  Similarity=0.065  Sum_probs=63.4

Q ss_pred             EeeCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~--yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIV  229 (285)
                      ...|||+.+.|++|++.  ++++|-|...+.+++.+++.++...+|....-     ..| ...   ++.+.....+++.|
T Consensus       383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~p-----~~K-~~~---v~~l~~~~~~v~~v  453 (556)
T TIGR01525       383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELLP-----EDK-LAI---VKELQEEGGVVAMV  453 (556)
T ss_pred             ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCCH-----HHH-HHH---HHHHHHcCCEEEEE
Confidence            56899999999999865  89999999999999999999998766653211     111 123   33334455699999


Q ss_pred             ECCcccccCCCCCeeee
Q 023259          230 DNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I  246 (285)
                      -|...-.......++-|
T Consensus       454 GDg~nD~~al~~A~vgi  470 (556)
T TIGR01525       454 GDGINDAPALAAADVGI  470 (556)
T ss_pred             ECChhHHHHHhhCCEeE
Confidence            99998776655555544

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>PLN02151 trehalose-phosphatase

Probab=81.65  E-value=2.6  Score=40.77  Aligned_cols=16  Identities=31%  Similarity=0.378  Sum_probs=13.6

Q ss_pred             CCceEEEEeCCCcccc
Q 023259           92 LQKLTVVLDLDETLVC  107 (285)
Q Consensus        92 ~~k~tLVLDLD~TLV~  107 (285)
                      .++..|+||+||||+-
T Consensus        96 ~~~~ll~lDyDGTL~P  111 (354)
T PLN02151         96 GKQIVMFLDYDGTLSP  111 (354)
T ss_pred             CCceEEEEecCccCCC
Confidence            3678899999999994

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=80.09  E-value=0.78  Score=38.32  Aligned_cols=14  Identities=36%  Similarity=0.548  Sum_probs=11.9

Q ss_pred             EEEEeCCCcccccc
Q 023259           96 TVVLDLDETLVCAY  109 (285)
Q Consensus        96 tLVLDLD~TLV~s~  109 (285)
                      .++|||||||+++.
T Consensus         1 ~vlFDlDgtLv~~~   14 (183)
T TIGR01509         1 AILFDLDGVLVDTS   14 (183)
T ss_pred             CeeeccCCceechH
Confidence            37999999999863

HAD subfamilies caused by an overly broad single model.

>PLN02580 trehalose-phosphatase

Probab=80.07  E-value=3.4  Score=40.44  Aligned_cols=61  Identities=18%  Similarity=0.240  Sum_probs=45.6

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhcce
Q 023259           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFAD  170 (285)
Q Consensus        91 ~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~ye  170 (285)
                      ..++..|+||.||||.--..   .|.                                  -+..=|++.+-|+.|++.+.
T Consensus       116 ~~k~~~LfLDyDGTLaPIv~---~Pd----------------------------------~A~~s~~~~~aL~~La~~~~  158 (384)
T PLN02580        116 KGKKIALFLDYDGTLSPIVD---DPD----------------------------------RALMSDAMRSAVKNVAKYFP  158 (384)
T ss_pred             hcCCeEEEEecCCccCCCCC---Ccc----------------------------------cccCCHHHHHHHHHHhhCCC
Confidence            34677888999999985211   111                                  13456899999999999999


Q ss_pred             EEEEccCchhhHHHHHHH
Q 023259          171 LILFTAGLEGYARPLVDR  188 (285)
Q Consensus       171 IvI~Ta~~~~YA~~Vl~~  188 (285)
                      ++|-|--...-++.++..
T Consensus       159 VAIVSGR~~~~L~~~l~~  176 (384)
T PLN02580        159 TAIISGRSRDKVYELVGL  176 (384)
T ss_pred             EEEEeCCCHHHHHHHhCC
Confidence            999998888877777653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	285
3l0y_A	184	Crystal Structure Of Scp1 Phosphatase D98a Mutant L		3e-15
1ta0_A	197	Three-Dimensional Structure Of A Rna-Polymerase Ii		3e-15
2ghq_A	181	Ctd-Specific Phosphatase Scp1 In Complex With Pepti		3e-15
3pgl_A	180	Crystal Structure Of Human Small C-Terminal Domain		4e-15
2q5e_A	187	Crystal Structure Of Human Carboxy-Terminal Domain		6e-15
1t9z_A	197	Three-Dimensional Structure Of A Rna-Polymerase Ii		8e-15
2hhl_A	195	Crystal Structure Of The Human Small Ctd Phosphatas		1e-14
3l0b_A	184	Crystal Structure Of Scp1 Phosphatase D206a Mutant		2e-14
3l0c_A	184	Crystal Structure Of Scp1 Phosphatase D206a Mutant		2e-14
3qle_A	204	Structural Basis For The Function Of Tim50 In The M		1e-11

>pdb|3L0Y|A Chain A, Crystal Structure Of Scp1 Phosphatase D98a Mutant Length = 184

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           ++ V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S   
Sbjct: 52  VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCV- 110
Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC 246
                +VKDLS L +DL R LI+DN+P S++  P N +P 
Sbjct: 111 FHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 150

>pdb|1TA0|A Chain A, Three-Dimensional Structure Of A Rna-Polymerase Ii Binding Protein With Associated Ligand Length = 197

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           ++ V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S   
Sbjct: 49  VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCV- 107
Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC 246
                +VKDLS L +DL R LI+DN+P S++  P N +P 
Sbjct: 108 FHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147

>pdb|2GHQ|A Chain A, Ctd-Specific Phosphatase Scp1 In Complex With Peptide C- Terminal Domain Of Rna Polymerase Ii Length = 181

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           ++ V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S   
Sbjct: 49  VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVF 108
Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC 246
                +VKDLS L +DL R LI+DN+P S++  P N +P 
Sbjct: 109 HR-GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147

>pdb|3PGL|A Chain A, Crystal Structure Of Human Small C-Terminal Domain Phosphatase 1 (Scp1) Bound To Rabeprazole Length = 180

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           ++ V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S   
Sbjct: 48  VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVF 107
Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC 246
                +VKDLS L +DL R LI+DN+P S++  P N +P 
Sbjct: 108 HR-GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 146

>pdb|2Q5E|A Chain A, Crystal Structure Of Human Carboxy-Terminal Domain Rna Polymerase Ii Polypeptide A Small Phosphatase 2 Length = 187

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 140 ECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRL 199
           E EG    + V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D   +F  RL
Sbjct: 46  EIEGT--THQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARL 103
Query: 200 YRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245
           +R S    +   +VKDLS L +DL +TLI+DN+P S++  P N +P
Sbjct: 104 FRESCVFHQ-GCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVP 148

>pdb|1T9Z|A Chain A, Three-Dimensional Structure Of A Rna-Polymerase Ii Binding Protein Length = 197

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           ++ V V +RP + EFL++  E  + +LFTA L  YA P+ D +D    F  RL+R S   
Sbjct: 49  VHQVYVLKRPHVDEFLQRXGELFECVLFTASLAKYADPVADXLDKWGAFRARLFRESCV- 107
Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC 246
                +VKDLS L +DL R LI DN+P S++  P N +P 
Sbjct: 108 FHRGNYVKDLSRLGRDLRRVLIXDNSPASYVFHPDNAVPV 147

>pdb|2HHL|A Chain A, Crystal Structure Of The Human Small Ctd Phosphatase 3 Isoform 1 Length = 195

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           I+ V V +RP + EFL+++ +  + +LFTA L  YA P+ D +D   +F  RL+R S   
Sbjct: 62  IHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCV- 120
Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC 246
                +VKDLS L ++L + +IVDN+P S++  P N +P 
Sbjct: 121 FHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPV 160

>pdb|3L0B|A Chain A, Crystal Structure Of Scp1 Phosphatase D206a Mutant Phosphory Intermediate Length = 184

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           ++ V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S   
Sbjct: 52  VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCV- 110
Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC 246
                +VKDLS L +DL R LI+ N+P S++  P N +P 
Sbjct: 111 FHRGNYVKDLSRLGRDLRRVLILANSPASYVFHPDNAVPV 150

>pdb|3L0C|A Chain A, Crystal Structure Of Scp1 Phosphatase D206a Mutant With Trap Inorganic Phosphate Length = 184

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           ++ V V +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S   
Sbjct: 52  VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCV- 110
Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC 246
                +VKDLS L +DL R LI+ N+P S++  P N +P 
Sbjct: 111 FHRGNYVKDLSRLGRDLRRVLILANSPASYVFHPDNAVPV 150

>pdb|3QLE|A Chain A, Structural Basis For The Function Of Tim50 In The Mitochondrial Presequence Translocase Length = 204

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 20/129 (15%)
Query: 154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLF-SLRLYRPSTTSTEYRE- 211
           +RPG   FL  LS++ +++LF++    Y+  + +++D  + F S  L++       Y++ 
Sbjct: 60  KRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCV---YKDG 116
Query: 212 -HVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC--------------IPFSAGQPHD 256
            H+KDLS L++DL + +I+D +P S+ LQP N IP               IPF       
Sbjct: 117 VHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPWNGEADDKLVRLIPFLEYLATQ 176
Query: 257 NQKDVRPEL 265
             KDVRP L
Sbjct: 177 QTKDVRPIL 185

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	285
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	5e-48
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	2e-47
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	5e-47
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	6e-33
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	1e-29
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	3e-23
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A Length = 181

 Score =  157 bits (398), Expect = 5e-48
 Identities = 58/189 (30%), Positives = 85/189 (44%), Gaps = 35/189 (18%)

Query: 93  QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTV 152
            K+ VV++LDETLV    +S  PV   +                     E    ++ V V
Sbjct: 14  DKICVVINLDETLVH---SSFKPVNNADFII----------------PVEIDGVVHQVYV 54

Query: 153 FERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREH 212
            +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S        +
Sbjct: 55  LKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHR-GNY 113

Query: 213 VKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQ-------------- 258
           VKDLS L +DL R LI+DN+P S++  P N +P   +      D +              
Sbjct: 114 VKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWF-DNMSDTELHDLLPFFEQLSRV 172

Query: 259 KDVRPELYE 267
            DV   L +
Sbjct: 173 DDVYSVLRQ 181

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} Length = 195

 Score =  156 bits (395), Expect = 2e-47
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 35/194 (18%)

Query: 87  VSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPK 146
           V+     K  VV+DLDETLV +                       +E             
Sbjct: 21  VTVLDYGKKCVVIDLDETLVHSSFKPISNADFI----------VPVEI---------DGT 61

Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
           I+ V V +RP + EFL+++ +  + +LFTA L  YA P+ D +D   +F  RL+R S   
Sbjct: 62  IHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVF 121

Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDN--------- 257
                +VKDLS L ++L + +IVDN+P S++  P N +P   +      D          
Sbjct: 122 HR-GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWF-DDMTDTELLDLIPFF 179

Query: 258 -----QKDVRPELY 266
                + D     +
Sbjct: 180 EGLSREDDEGHHHH 193

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} Length = 204

 Score =  155 bits (393), Expect = 5e-47
 Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 55/213 (25%)

Query: 85  DVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGK 144
                   + LT+V+ L++ LV                                   E  
Sbjct: 25  PPPPPPYQRPLTLVITLEDFLVH---------------------------------SEWS 51

Query: 145 PKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN-LFSLRLYRPS 203
            K +     +RPG   FL  LS++ +++LF++    Y+  + +++D  +   S  L++  
Sbjct: 52  QK-HGWRTAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEH 110

Query: 204 TTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHD------- 256
               +   H+KDLS L++DL + +I+D +P S+ LQP N IP  P++ G+  D       
Sbjct: 111 CVYKD-GVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPWN-GEADDKLVRLIP 168

Query: 257 --------NQKDVRPEL---YERFHMPEWFQKQ 278
                     KDVRP L    ++ ++ E F  +
Sbjct: 169 FLEYLATQQTKDVRPILNSFEDKKNLAEEFDHR 201

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} Length = 372

 Score =  123 bits (309), Expect = 6e-33
 Identities = 38/174 (21%), Positives = 78/174 (44%), Gaps = 10/174 (5%)

Query: 80  RDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDK 139
           R   ++V    + ++L++++DLD+T++ A    ++   + +          ++   +  +
Sbjct: 4   RLESENVKRLRQEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQE 63

Query: 140 ECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN-LFSLR 198
              G     ++    RPGL +FL+++SE  +L ++T G + YA+ +   ID    LF  R
Sbjct: 64  GPSGYTSCYYIKF--RPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDR 121

Query: 199 -LYRPSTTSTEYREHVKDLS-CLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS 250
            L R  + S       K L      D    +++D+    +   P N I  +P+ 
Sbjct: 122 VLSRDDSGSL----AQKSLRRLFPCDTSMVVVIDDRGDVWDWNP-NLIKVVPYE 170

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} Length = 442

 Score =  115 bits (288), Expect = 1e-29
 Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 12/203 (5%)

Query: 78  AVRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSS 137
           A R   ++V    + ++L++++ LD+T++ A    ++   + +          ++   + 
Sbjct: 10  ASRLESENVKRLRQEKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNL 69

Query: 138 DKECEGKPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN-LFS 196
            +   G        +  RPGL +FL+++SE  +L ++T G + YA+ +   ID    LF 
Sbjct: 70  QEGPSGYTS--CYYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQ 127

Query: 197 LR-LYRPSTTSTEYREHVKDLS-CLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQP 254
            R L R  + S       K L      D    +++D+    +   P N I  +P+     
Sbjct: 128 DRVLSRDDSGSL----AQKSLRRLFPCDTSMVVVIDDRGDVWDWNP-NLIKVVPYEFFVG 182

Query: 255 HDNQKDVRPELYERFHMPEWFQK 277
             +       L +   +PE  Q 
Sbjct: 183 IGDINS--NFLAKSTPLPEQEQL 203

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} Length = 320

 Score = 96.1 bits (238), Expect = 3e-23
 Identities = 23/139 (16%), Positives = 48/139 (34%), Gaps = 17/139 (12%)

Query: 144 KPKINHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLY--- 200
           +      T   RP L EFL    E  D+++++A    +    +  +   +  + ++    
Sbjct: 155 RSPAETGTELMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYL 214

Query: 201 -----RPSTTSTEYREHVKDLSCLSK-----DLCRTLIVDNNPFSFLLQPLNGIPCIPFS 250
                            VK L  +       +   T++ D+   +FL+ P +G+   PF 
Sbjct: 215 DSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLKIRPFR 274

Query: 251 A---GQPHDNQ-KDVRPEL 265
                +  D +   +   L
Sbjct: 275 QAHLNRGTDTELLKLSDYL 293

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 3e-05
 Identities = 47/320 (14%), Positives = 94/320 (29%), Gaps = 67/320 (20%)

Query: 7   AEVAYSHRSIQVWRTLLNWLAFFFQIF-AKILRALGHHPLLSSSASASTHAFKPLQVVEL 65
            +V  S++ +Q            F+IF   +        +L                   
Sbjct: 168 LDVCLSYK-VQ--------CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT--SR 216

Query: 66  PETDSSATVDIGAVRDSGDDVVSEERLQKLTVVLD--LDETLVCAYETSS--LPVTLRNQ 121
            +  S+  + I +++     ++  +  +   +VL    +     A+  S   L +T R +
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL-LTTRFK 275

Query: 122 ATGAGLKWFEMECLSSDKECEG--KP-------KINHVTVFERPGLREFLK----QLSEF 168
                L       +S D                K       + P  RE L     +LS  
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP--REVLTTNPRRLSII 333

Query: 169 ADLIL-FTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKD----- 222
           A+ I    A  + +     D++      SL +  P+    EYR+    LS          
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA----EYRKMFDRLSVFPPSAHIPT 389

Query: 223 ---------------------LCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQKDV 261
                                L +  +V+  P    +     IP I        +N+  +
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI----SIPSIYLELKVKLENEYAL 445

Query: 262 RPELYERFHMPEWFQKQGIP 281
              + + +++P+ F    + 
Sbjct: 446 HRSIVDHYNIPKTFDSDDLI 465

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	285
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	100.0
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	100.0
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	100.0
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	99.98
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	99.97
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	99.96
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.04
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	98.94
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	98.94
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	98.9
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	98.84
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	98.81
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	98.71
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	98.69
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	98.68
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	98.68
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	98.68
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	98.66
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	98.66
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	98.64
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	98.64
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	98.61
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	98.61
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	98.6
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	98.59
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	98.57
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	98.56
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	98.56
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	98.56
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	98.54
2hsz_A	243	Novel predicted phosphatase; structural genomics,	98.54
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	98.53
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	98.53
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	98.53
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	98.52
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	98.47
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	98.46
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	98.46
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	98.45
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	98.45
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	98.44
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	98.43
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	98.42
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	98.36
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	98.36
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	98.33
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	98.33
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	98.3
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	98.3
2o2x_A	218	Hypothetical protein; structural genomics, joint c	98.25
3mn1_A	189	Probable YRBI family phosphatase; structural genom	98.22
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	98.2
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	98.17
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.16
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.15
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.14
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	98.11
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	98.07
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	98.06
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	98.05
3mmz_A	176	Putative HAD family hydrolase; structural genomics	97.97
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	97.97
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	97.93
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.92
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	97.9
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	97.9
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	97.82
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	97.82
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	97.81
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	97.76
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	97.75
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	97.74
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	97.73
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	97.73
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	97.71
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	97.7
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	97.7
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	97.67
2zg6_A	220	Putative uncharacterized protein ST2620, probable	97.63
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	97.61
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	97.57
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	97.53
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	97.53
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	97.51
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	97.35
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	97.34
1te2_A	226	Putative phosphatase; structural genomics, phospha	97.31
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	97.28
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	97.21
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	97.21
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	97.17
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	97.15
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	97.09
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	97.07
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	97.07
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	97.07
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	97.05
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	97.04
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	97.04
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	97.03
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	96.95
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	96.91
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	96.9
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	96.73
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	96.69
3fvv_A	232	Uncharacterized protein; unknown function, structu	96.66
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	96.65
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	96.6
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	96.6
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	96.55
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	96.55
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	96.24
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	96.22
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	96.19
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	96.11
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	95.98
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	95.93
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	95.88
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	95.86
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	95.73
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	95.73
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	94.65
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	95.65
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	95.63
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	95.43
3dao_A	283	Putative phosphatse; structural genomics, joint ce	95.41
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	95.33
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	95.28
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	95.23
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	95.15
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	95.12
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	95.11
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	94.82
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	94.65
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	94.63
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	94.53
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	94.37
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	94.2
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	94.15
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	94.15
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	94.01
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	93.97
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	93.92
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	93.87
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	93.77
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	93.37
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	92.65
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	90.88
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	90.71
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	90.5
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	90.34
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	89.95
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	89.9
3fvv_A	232	Uncharacterized protein; unknown function, structu	89.68
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	89.21
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	89.04
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	89.02
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	89.0
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	88.94
1te2_A	226	Putative phosphatase; structural genomics, phospha	88.64
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	88.58
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	88.57
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	88.53
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	88.32
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	88.24
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	87.92
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	87.87
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	87.77
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	87.56
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	87.26
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	87.24
2zg6_A	220	Putative uncharacterized protein ST2620, probable	87.06
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	86.96
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	86.63
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	86.42
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	86.26
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	85.61
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	85.58
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	84.88
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	84.63
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	84.45
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	82.17
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	81.3

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=100.00  E-value=6.7e-39  Score=283.04  Aligned_cols=152  Identities=32%  Similarity=0.542  Sum_probs=134.2

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhcce
Q 023259           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFAD  170 (285)
Q Consensus        91 ~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~ye  170 (285)
                      ..+|+||||||||||||+.+..                                  ...++|++|||+++||++|+++||
T Consensus        31 ~~~~~tLVLDLDeTLvh~~~~~----------------------------------~~~~~v~~RPgl~eFL~~l~~~ye   76 (204)
T 3qle_A           31 YQRPLTLVITLEDFLVHSEWSQ----------------------------------KHGWRTAKRPGADYFLGYLSQYYE   76 (204)
T ss_dssp             -CCSEEEEEECBTTTEEEEEET----------------------------------TTEEEEEECTTHHHHHHHHTTTEE
T ss_pred             cCCCeEEEEeccccEEeeeccc----------------------------------cCceeEEeCCCHHHHHHHHHhCCE
Confidence            4689999999999999974321                                  024689999999999999999999


Q ss_pred             EEEEccCchhhHHHHHHHhcCCC-ceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccCCCCCeeeeCcc
Q 023259          171 LILFTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       171 IvI~Ta~~~~YA~~Vl~~LDp~~-~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~~F  249 (285)
                      |+|||++.+.||++|++.||+.+ +|.++++|++|... .+.|+|||+.||+++++||||||++.+|..||+|||+|++|
T Consensus        77 ivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~-~g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~~~  155 (204)
T 3qle_A           77 IVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYK-DGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPW  155 (204)
T ss_dssp             EEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEEE-TTEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECCCC
T ss_pred             EEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeEE-CCeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEeeeE
Confidence            99999999999999999999984 89999999999864 57899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCc----------------cCcHHHHHh---hcCChHHHHhcC
Q 023259          250 SAGQPHDNQ----------------KDVRPELYE---RFHMPEWFQKQG  279 (285)
Q Consensus       250 ~~g~~~D~~----------------~DVR~vL~~---~f~~~e~~~~~~  279 (285)
                      . |++ |++                +|||++|++   ..+++++|+++-
T Consensus       156 ~-~~~-D~eL~~L~~~L~~L~~~~~~DVR~~L~~~~~~~~~~~~f~~~~  202 (204)
T 3qle_A          156 N-GEA-DDKLVRLIPFLEYLATQQTKDVRPILNSFEDKKNLAEEFDHRV  202 (204)
T ss_dssp             C-SSC-CCHHHHHHHHHHHHHHTCCSCSHHHHTTSSCGGGHHHHHHHHC
T ss_pred             C-CCC-ChhHHHHHHHHHHHhhcChHHHHHHHHHhcCCCCHHHHHHHhh
Confidence            7 665 555                799999964   357889998863

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=100.00  E-value=5.2e-35  Score=252.74  Aligned_cols=155  Identities=37%  Similarity=0.557  Sum_probs=131.1

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhcce
Q 023259           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFAD  170 (285)
Q Consensus        91 ~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~ye  170 (285)
                      ..+|++|||||||||||+......+         .   .|.+.     +..+|.  ...+++.+|||+++||+++++.|+
T Consensus        12 ~~~k~~LVLDLD~TLvhs~~~~~~~---------~---d~~~~-----~~~~~~--~~~~~v~~rPg~~efL~~l~~~~~   72 (181)
T 2ght_A           12 DSDKICVVINLDETLVHSSFKPVNN---------A---DFIIP-----VEIDGV--VHQVYVLKRPHVDEFLQRMGELFE   72 (181)
T ss_dssp             GTTSCEEEECCBTTTEEEESSCCSS---------C---SEEEE-----EEETTE--EEEEEEEECTTHHHHHHHHHHHSE
T ss_pred             cCCCeEEEECCCCCeECCcccCCCC---------c---cceee-----eeeCCe--eEEEEEEeCCCHHHHHHHHHhCCC
Confidence            4689999999999999985432110         0   12221     122232  245789999999999999999999


Q ss_pred             EEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccCCCCCeeeeCccC
Q 023259          171 LILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS  250 (285)
Q Consensus       171 IvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~~F~  250 (285)
                      ++|||++.+.||+++++.||+.++|..+++|++|...+ +.|.|+|++||+++++||+|||++..+..+++|||+|.+|.
T Consensus        73 i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~~k-~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~~~~  151 (181)
T 2ght_A           73 CVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHR-GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWF  151 (181)
T ss_dssp             EEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEEET-TEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCCCCCS
T ss_pred             EEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCceecC-CcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEecccc
Confidence            99999999999999999999999999999999998764 78999999999999999999999999999999999999997


Q ss_pred             CCCCCCCc--------------cCcHHHHH
Q 023259          251 AGQPHDNQ--------------KDVRPELY  266 (285)
Q Consensus       251 ~g~~~D~~--------------~DVR~vL~  266 (285)
                       ++++|++              +|||++|+
T Consensus       152 -~~~~D~eL~~l~~~L~~l~~~~DVr~~l~  180 (181)
T 2ght_A          152 -DNMSDTELHDLLPFFEQLSRVDDVYSVLR  180 (181)
T ss_dssp             -SCTTCCHHHHHHHHHHHHTTCSCTHHHHC
T ss_pred             -CCCChHHHHHHHHHHHHhCcCccHHHHhh
Confidence             7788987              78888775

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.6e-32  Score=240.13  Aligned_cols=160  Identities=35%  Similarity=0.521  Sum_probs=134.5

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhcce
Q 023259           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFAD  170 (285)
Q Consensus        91 ~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~ye  170 (285)
                      ..+|++|||||||||||+.+.....         .   .|.+.     +..+|.  ...+++.+|||+++||++|++.|+
T Consensus        25 ~~~k~~LVLDLD~TLvhs~~~~~~~---------~---d~~~~-----~~~~g~--~~~~~v~~RPgv~efL~~l~~~~~   85 (195)
T 2hhl_A           25 DYGKKCVVIDLDETLVHSSFKPISN---------A---DFIVP-----VEIDGT--IHQVYVLKRPHVDEFLQRMGQLFE   85 (195)
T ss_dssp             GTTCCEEEECCBTTTEEEESSCCTT---------C---SEEEE-----EEETTE--EEEEEEEECTTHHHHHHHHHHHSE
T ss_pred             cCCCeEEEEccccceEcccccCCCC---------c---cceee-----eecCCc--eeeEEEEeCcCHHHHHHHHHcCCe
Confidence            4589999999999999986432110         0   12222     122332  245789999999999999999999


Q ss_pred             EEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccCCCCCeeeeCccC
Q 023259          171 LILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS  250 (285)
Q Consensus       171 IvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~~F~  250 (285)
                      ++|||++.+.||+++++.+|+.++|..+++|++|...+ +.|.|+|++||+++++||+|||++..+..++.|||+|.+|.
T Consensus        86 i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~~k-~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~~  164 (195)
T 2hhl_A           86 CVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHR-GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWF  164 (195)
T ss_dssp             EEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEEET-TEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCCS
T ss_pred             EEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccceecC-CceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEeeec
Confidence            99999999999999999999999999999999998765 78999999999999999999999999999999999999997


Q ss_pred             CCCCCCCc-cCcHHHHHhhcCC
Q 023259          251 AGQPHDNQ-KDVRPELYERFHM  271 (285)
Q Consensus       251 ~g~~~D~~-~DVR~vL~~~f~~  271 (285)
                       ++++|++ .++.++|..--..
T Consensus       165 -~~~~D~eL~~L~~~L~~l~~~  185 (195)
T 2hhl_A          165 -DDMTDTELLDLIPFFEGLSRE  185 (195)
T ss_dssp             -SCTTCCHHHHHHHHHHHHHC-
T ss_pred             -CCCChHHHHHHHHHHHHHHhC
Confidence             6788988 8899988765443

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=99.98  E-value=1.8e-33  Score=263.49  Aligned_cols=146  Identities=24%  Similarity=0.318  Sum_probs=123.7

Q ss_pred             cccCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc
Q 023259           89 EERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF  168 (285)
Q Consensus        89 ~~~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~  168 (285)
                      .+..+|+||||||||||||+....                                   ..+++++||||++||++|+++
T Consensus       135 p~~~~k~tLVLDLDeTLvh~~~~~-----------------------------------~~~~~~~RP~l~eFL~~l~~~  179 (320)
T 3shq_A          135 PPREGKKLLVLDIDYTLFDHRSPA-----------------------------------ETGTELMRPYLHEFLTSAYED  179 (320)
T ss_dssp             CCCTTCEEEEECCBTTTBCSSSCC-----------------------------------SSHHHHBCTTHHHHHHHHHHH
T ss_pred             CCcCCCcEEEEeccccEEcccccC-----------------------------------CCcceEeCCCHHHHHHHHHhC
Confidence            345689999999999999974211                                   123578999999999999999


Q ss_pred             ceEEEEccCchhhHHHHHHHhcCCCc--eeEEEecCccccc-----CCc-ccccccccc-----CCCCCcEEEEECCccc
Q 023259          169 ADLILFTAGLEGYARPLVDRIDGENL--FSLRLYRPSTTST-----EYR-EHVKDLSCL-----SKDLCRTLIVDNNPFS  235 (285)
Q Consensus       169 yeIvI~Ta~~~~YA~~Vl~~LDp~~~--f~~~l~r~~c~~~-----k~~-~~~KdL~~L-----grdl~~vVIVDDs~~~  235 (285)
                      |||+||||+.+.||++|++.||+.+.  +.++++|++|...     +++ .|+|||++|     |+++++||||||++.+
T Consensus       180 yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~  259 (320)
T 3shq_A          180 YDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRN  259 (320)
T ss_dssp             EEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGG
T ss_pred             CEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHH
Confidence            99999999999999999999999875  6788999998522     234 589999999     9999999999999999


Q ss_pred             ccCCCCCeeeeCccCCC---CCCCCc---------------cCcHHHHHhhc
Q 023259          236 FLLQPLNGIPCIPFSAG---QPHDNQ---------------KDVRPELYERF  269 (285)
Q Consensus       236 ~~~~p~NgI~I~~F~~g---~~~D~~---------------~DVR~vL~~~f  269 (285)
                      |..||+|||+|.+|.++   +++|++               +|||++++++|
T Consensus       260 ~~~~p~NgI~I~~~~~~~~~~~~D~eL~~L~~~L~~L~~~~~DVr~~~~~~w  311 (320)
T 3shq_A          260 FLMNPKSGLKIRPFRQAHLNRGTDTELLKLSDYLRKIAHHCPDFNSLNHRKW  311 (320)
T ss_dssp             GTTSGGGEEECCCCCCHHHHTTTCCHHHHHHHHHHHHHHHCSCGGGCCGGGG
T ss_pred             hccCcCceEEeCeEcCCCCCCCccHHHHHHHHHHHHHhccCcchhHHHHHHH
Confidence            99999999999999743   267887               58888877654

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=99.97  E-value=2e-30  Score=251.38  Aligned_cols=155  Identities=24%  Similarity=0.390  Sum_probs=120.2

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhcc---ccc--ccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHh
Q 023259           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRN---QAT--GAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQL  165 (285)
Q Consensus        91 ~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~---~~~--~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~l  165 (285)
                      ..+|++||||||+|||||.......++.+.   ...  ..+...|.++.     ..+|.  ...+||++|||+++||++|
T Consensus        23 ~~~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~~dv~~F~l~~-----~~~~~--~~~~~V~~RPgl~eFL~~l   95 (442)
T 3ef1_A           23 QEKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQE-----GPSGY--TSCYYIKFRPGLAQFLQKI   95 (442)
T ss_dssp             HTTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEE-----TTTTE--EEEEEEEECTTHHHHHHHH
T ss_pred             hcCCeEEEEeeccceeccccccccchhccCCCCcchhhhccccceeeee-----ccCCc--eeEEEEEeCCCHHHHHHHH
Confidence            468999999999999998643221111110   000  11223455532     22232  3579999999999999999


Q ss_pred             hhcceEEEEccCchhhHHHHHHHhcCCC-ceeEEEe-cCcccccCCcccccccccc-CCCCCcEEEEECCcccccCCCCC
Q 023259          166 SEFADLILFTAGLEGYARPLVDRIDGEN-LFSLRLY-RPSTTSTEYREHVKDLSCL-SKDLCRTLIVDNNPFSFLLQPLN  242 (285)
Q Consensus       166 s~~yeIvI~Ta~~~~YA~~Vl~~LDp~~-~f~~~l~-r~~c~~~k~~~~~KdL~~L-grdl~~vVIVDDs~~~~~~~p~N  242 (285)
                      +++|||+|||++.+.||++|++.|||.+ +|.+|++ |++|+    ..|+|||++| |+++++||||||++.+|..|| |
T Consensus        96 s~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg----~~~~KdL~~ll~rdl~~vvIIDd~p~~~~~~p-N  170 (442)
T 3ef1_A           96 SELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSG----SLAQKSLRRLFPCDTSMVVVIDDRGDVWDWNP-N  170 (442)
T ss_dssp             TTTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSS----CSSCCCGGGTCSSCCTTEEEEESCSGGGTTCT-T
T ss_pred             hCCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCC----CceeeehHHhcCCCcceEEEEECCHHHhCCCC-C
Confidence            9999999999999999999999999998 7888776 99984    3589999976 999999999999999999998 9


Q ss_pred             eeeeCccC----CCCCCCC
Q 023259          243 GIPCIPFS----AGQPHDN  257 (285)
Q Consensus       243 gI~I~~F~----~g~~~D~  257 (285)
                      ||+|.+|.    .||.+|+
T Consensus       171 ~I~I~~~~fF~~~gD~n~~  189 (442)
T 3ef1_A          171 LIKVVPYEFFVGIGDINSN  189 (442)
T ss_dssp             EEECCCCCCSTTCCCSCC-
T ss_pred             EEEcCCccccCCCCccccc
Confidence            99999995    3555553

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=99.96  E-value=5.2e-29  Score=237.60  Aligned_cols=148  Identities=25%  Similarity=0.396  Sum_probs=115.5

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhc-----ccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHh
Q 023259           91 RLQKLTVVLDLDETLVCAYETSSLPVTLR-----NQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQL  165 (285)
Q Consensus        91 ~~~k~tLVLDLD~TLV~s~~~s~lp~~~~-----~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~l  165 (285)
                      ..+|++||||||||||||.......+|.+     +.....+...|.++..     ..|.  ...+||++|||+++||+++
T Consensus        15 ~~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~-----~~~~--~~~~~v~~RPg~~eFL~~l   87 (372)
T 3ef0_A           15 QEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEG-----PSGY--TSCYYIKFRPGLAQFLQKI   87 (372)
T ss_dssp             HHTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEET-----TTTE--EEEEEEEECTTHHHHHHHH
T ss_pred             hCCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeec-----cCCc--eEEEEEEECcCHHHHHHHH
Confidence            45899999999999999853221111111     0001122223544321     1222  3568899999999999999


Q ss_pred             hhcceEEEEccCchhhHHHHHHHhcCCC-ceeEEEe-cCcccccCCcccccccccc-CCCCCcEEEEECCcccccCCCCC
Q 023259          166 SEFADLILFTAGLEGYARPLVDRIDGEN-LFSLRLY-RPSTTSTEYREHVKDLSCL-SKDLCRTLIVDNNPFSFLLQPLN  242 (285)
Q Consensus       166 s~~yeIvI~Ta~~~~YA~~Vl~~LDp~~-~f~~~l~-r~~c~~~k~~~~~KdL~~L-grdl~~vVIVDDs~~~~~~~p~N  242 (285)
                      +++|||+|||++.+.||++|++.|||.+ +|.++++ |++|+    ..|+|||++| |+++++||||||++.+|..|| |
T Consensus        88 ~~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g----~~~~KdL~~L~~~dl~~viiiDd~~~~~~~~p-N  162 (372)
T 3ef0_A           88 SELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSG----SLAQKSLRRLFPCDTSMVVVIDDRGDVWDWNP-N  162 (372)
T ss_dssp             HTTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSS----CSSCCCGGGTCSSCCTTEEEEESCSGGGTTCT-T
T ss_pred             hcCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCC----CcceecHHHhcCCCCceEEEEeCCHHHcCCCC-c
Confidence            9999999999999999999999999998 7886665 98884    3589999987 999999999999999999998 9


Q ss_pred             eeeeCccC
Q 023259          243 GIPCIPFS  250 (285)
Q Consensus       243 gI~I~~F~  250 (285)
                      ||+|.+|.
T Consensus       163 ~I~i~~~~  170 (372)
T 3ef0_A          163 LIKVVPYE  170 (372)
T ss_dssp             EEECCCCC
T ss_pred             EeeeCCcc
Confidence            99999995

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.04  E-value=1.3e-11  Score=97.62  Aligned_cols=114  Identities=8%  Similarity=0.112  Sum_probs=88.2

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEEE
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVD  230 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIVD  230 (285)
                      ..||+.++|+.|++. +.++|.|++...+++.+++.++...+|..++..+.+...|..  .+.+-++.++.+++++++|+
T Consensus        19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vg   98 (137)
T 2pr7_A           19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVD   98 (137)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEE
T ss_pred             cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEc
Confidence            479999999999988 999999999999999999999888889888887765544433  56667788899999999999


Q ss_pred             CCcccccCCCCCeeeeCccCCCCCCCCccCcHHHHHhhcCChH
Q 023259          231 NNPFSFLLQPLNGIPCIPFSAGQPHDNQKDVRPELYERFHMPE  273 (285)
Q Consensus       231 Ds~~~~~~~p~NgI~I~~F~~g~~~D~~~DVR~vL~~~f~~~e  273 (285)
                      |++.........|+..--+..+      .+.+..|.+.+++.+
T Consensus        99 D~~~di~~a~~~G~~~i~~~~~------~~~~~~l~~~~~~~~  135 (137)
T 2pr7_A           99 DSILNVRGAVEAGLVGVYYQQF------DRAVVEIVGLFGLEG  135 (137)
T ss_dssp             SCHHHHHHHHHHTCEEEECSCH------HHHHHHHHHHHTCCS
T ss_pred             CCHHHHHHHHHCCCEEEEeCCh------HHHHHHHHHHhCCcc
Confidence            9998876666677755444322      345555666555544

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=98.94  E-value=1.8e-10  Score=98.01  Aligned_cols=94  Identities=19%  Similarity=0.189  Sum_probs=82.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|.|++....+..+++.++..++|+.+++.+.+...|..  .|.+-++.+|.+++++|+
T Consensus        83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~  162 (216)
T 3kbb_A           83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVV  162 (216)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEE
T ss_pred             cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccceEE
Confidence            56789999999999877 999999999999999999999999999999998887666543  678889999999999999


Q ss_pred             EECCcccccCCCCCeee
Q 023259          229 VDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~  245 (285)
                      |+|++.........|+.
T Consensus       163 VgDs~~Di~aA~~aG~~  179 (216)
T 3kbb_A          163 FEDSKSGVEAAKSAGIE  179 (216)
T ss_dssp             EECSHHHHHHHHHTTCC
T ss_pred             EecCHHHHHHHHHcCCc
Confidence            99999877766666764

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=98.94  E-value=8.6e-10  Score=94.32  Aligned_cols=98  Identities=11%  Similarity=0.090  Sum_probs=82.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCC-cEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLC-RTL  227 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~-~vV  227 (285)
                      ....||+.++|+.|++. +.++|.|++...+++.+++.++...+|..+++.+.+...+..  .+.+-++.+|.+++ +++
T Consensus       102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v  181 (231)
T 3kzx_A          102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVF  181 (231)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEE
T ss_pred             ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEE
Confidence            56899999999999988 999999999999999999999988899999888776554432  56677888999998 999


Q ss_pred             EEECCcccccCCCCCeeeeCcc
Q 023259          228 IVDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       228 IVDDs~~~~~~~p~NgI~I~~F  249 (285)
                      .|+|+..-.......|+.+--+
T Consensus       182 ~vGD~~~Di~~a~~aG~~~v~~  203 (231)
T 3kzx_A          182 FIGDSISDIQSAIEAGCLPIKY  203 (231)
T ss_dssp             EEESSHHHHHHHHHTTCEEEEE
T ss_pred             EEcCCHHHHHHHHHCCCeEEEE
Confidence            9999998777666677655545

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=98.90  E-value=1.7e-09  Score=91.73  Aligned_cols=98  Identities=14%  Similarity=0.135  Sum_probs=79.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCch---hhHHHHHHHhcCCCceeEEEecCcc----cccCC--ccccccccccCC
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLE---GYARPLVDRIDGENLFSLRLYRPST----TSTEY--REHVKDLSCLSK  221 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~---~YA~~Vl~~LDp~~~f~~~l~r~~c----~~~k~--~~~~KdL~~Lgr  221 (285)
                      +...||+.++|+.|++. +.++|.|++..   ..+..+++.++...+|..++..+..    ...|.  ..+.+-++.+|.
T Consensus        33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~  112 (189)
T 3ib6_A           33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQI  112 (189)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTC
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCC
Confidence            45799999999999988 99999999887   8999999999999999999888764    33333  256777888899


Q ss_pred             CCCcEEEEECC-cccccCCCCCeeeeCcc
Q 023259          222 DLCRTLIVDNN-PFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       222 dl~~vVIVDDs-~~~~~~~p~NgI~I~~F  249 (285)
                      +++++|+|+|+ ..........|+..--+
T Consensus       113 ~~~~~l~VGD~~~~Di~~A~~aG~~~i~v  141 (189)
T 3ib6_A          113 DKTEAVMVGNTFESDIIGANRAGIHAIWL  141 (189)
T ss_dssp             CGGGEEEEESBTTTTHHHHHHTTCEEEEE
T ss_pred             CcccEEEECCCcHHHHHHHHHCCCeEEEE
Confidence            99999999999 57666566666554433

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=98.84  E-value=2.3e-09  Score=90.62  Aligned_cols=96  Identities=17%  Similarity=0.146  Sum_probs=77.6

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCc-hhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGL-EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~-~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +...||+.++|+.|++. +.++|.|++. ..+++.+++.++...+|...+....   .+...+.+-++.+|.+++++++|
T Consensus        67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~~---~k~~~~~~~~~~~~~~~~~~~~i  143 (187)
T 2wm8_A           67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPG---SKITHFERLQQKTGIPFSQMIFF  143 (187)
T ss_dssp             ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEESSS---CHHHHHHHHHHHHCCCGGGEEEE
T ss_pred             cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEEeC---chHHHHHHHHHHcCCChHHEEEE
Confidence            56799999999999987 9999999998 7999999999999888887643321   12235667778889999999999


Q ss_pred             ECCcccccCCCCCeeeeCccC
Q 023259          230 DNNPFSFLLQPLNGIPCIPFS  250 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I~~F~  250 (285)
                      +|+..........|+.+--+.
T Consensus       144 gD~~~Di~~a~~aG~~~i~v~  164 (187)
T 2wm8_A          144 DDERRNIVDVSKLGVTCIHIQ  164 (187)
T ss_dssp             ESCHHHHHHHHTTTCEEEECS
T ss_pred             eCCccChHHHHHcCCEEEEEC
Confidence            999888777777787765543

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=98.81  E-value=5.5e-09  Score=88.14  Aligned_cols=127  Identities=14%  Similarity=0.160  Sum_probs=88.5

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-c
Q 023259           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-A  169 (285)
Q Consensus        91 ~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-y  169 (285)
                      -...++++||+||||+..... .                |..         ...     -.+...||+.++|+.|++. |
T Consensus        11 ~~~~k~~~~D~Dgtl~~~~~~-~----------------~~~---------~~~-----~~~~~~pg~~e~L~~L~~~G~   59 (176)
T 2fpr_A           11 GSSQKYLFIDRDGTLISEPPS-D----------------FQV---------DRF-----DKLAFEPGVIPQLLKLQKAGY   59 (176)
T ss_dssp             --CCEEEEECSBTTTBCCC---C----------------CCC---------CSG-----GGCCBCTTHHHHHHHHHHTTE
T ss_pred             CCcCcEEEEeCCCCeEcCCCC-C----------------cCc---------CCH-----HHCcCCccHHHHHHHHHHCCC
Confidence            347899999999999974210 0                000         000     0144789999999999987 9


Q ss_pred             eEEEEccC---------------chhhHHHHHHHhcCCCceeEEEec-----CcccccCC--ccccccccccCCCCCcEE
Q 023259          170 DLILFTAG---------------LEGYARPLVDRIDGENLFSLRLYR-----PSTTSTEY--REHVKDLSCLSKDLCRTL  227 (285)
Q Consensus       170 eIvI~Ta~---------------~~~YA~~Vl~~LDp~~~f~~~l~r-----~~c~~~k~--~~~~KdL~~Lgrdl~~vV  227 (285)
                      .++|.|++               ...+++.+++.++..  |..+++.     +.+...|.  ..+.+-++.++.+++++|
T Consensus        60 ~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l  137 (176)
T 2fpr_A           60 KLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSY  137 (176)
T ss_dssp             EEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTTSCGGGGGGC----CCGGGCE
T ss_pred             EEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccccCCCHHHHHHHHHHcCCCHHHEE
Confidence            99999999               678889999988876  7777654     45444443  356777888999999999


Q ss_pred             EEECCcccccCCCCCeeeeCccC
Q 023259          228 IVDNNPFSFLLQPLNGIPCIPFS  250 (285)
Q Consensus       228 IVDDs~~~~~~~p~NgI~I~~F~  250 (285)
                      +|+|++.........|+..--+.
T Consensus       138 ~VGD~~~Di~~A~~aG~~~i~v~  160 (176)
T 2fpr_A          138 VIGDRATDIQLAENMGINGLRYD  160 (176)
T ss_dssp             EEESSHHHHHHHHHHTSEEEECB
T ss_pred             EEcCCHHHHHHHHHcCCeEEEEc
Confidence            99999977766667777655554

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=98.69  E-value=1.4e-09  Score=90.61  Aligned_cols=98  Identities=10%  Similarity=0.115  Sum_probs=81.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +..+||+.++|+.+++. +.++|.|++...+++.+++.++...+|..++..+.+...+..  .+.+-++.+|.++++++.
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  167 (214)
T 3e58_A           88 ELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALI  167 (214)
T ss_dssp             HHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEE
Confidence            35789999999999988 999999999999999999999998899999888776544432  566778889999999999


Q ss_pred             EECCcccccCCCCCeeeeCcc
Q 023259          229 VDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~~F  249 (285)
                      |+|+..-.......|+.+--.
T Consensus       168 iGD~~~Di~~a~~aG~~~~~~  188 (214)
T 3e58_A          168 IEDSEKGIAAGVAADVEVWAI  188 (214)
T ss_dssp             EECSHHHHHHHHHTTCEEEEE
T ss_pred             EeccHhhHHHHHHCCCEEEEE
Confidence            999987776666666654443

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=98.68  E-value=2e-08  Score=84.71  Aligned_cols=96  Identities=16%  Similarity=0.107  Sum_probs=77.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCc-----------c-cccCCccccccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPS-----------T-TSTEYREHVKDLSC  218 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~-----------c-~~~k~~~~~KdL~~  218 (285)
                      +..+||+.++|+.+++. +.++|.|++...+++.+++.++...+|..++..++           | ...+...+.+-++.
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~~  153 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQRL  153 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHHH
Confidence            56899999999999988 99999999999999999999998888887764333           1 11111245666777


Q ss_pred             cCCCCCcEEEEECCcccccCCCCCeeeeC
Q 023259          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       219 Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      +|.++++++.|+|++.-.......|+.+-
T Consensus       154 ~g~~~~~~i~vGDs~~Di~~a~~aG~~~~  182 (217)
T 3m1y_A          154 LNISKTNTLVVGDGANDLSMFKHAHIKIA  182 (217)
T ss_dssp             HTCCSTTEEEEECSGGGHHHHTTCSEEEE
T ss_pred             cCCCHhHEEEEeCCHHHHHHHHHCCCeEE
Confidence            89999999999999988877777888763

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=98.68  E-value=2.7e-09  Score=91.35  Aligned_cols=94  Identities=16%  Similarity=0.113  Sum_probs=80.2

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      ...||+.++|+.+++. +.++|.|++...+++.+++.++...+|..+++.+.+...+..  .+.+-++.+|.++++++.|
T Consensus       104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~v  183 (237)
T 4ex6_A          104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVI  183 (237)
T ss_dssp             GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred             ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEE
Confidence            4789999999999987 999999999999999999999988889999888876544432  5667788899999999999


Q ss_pred             ECCcccccCCCCCeeee
Q 023259          230 DNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I  246 (285)
                      +|+..-.......|+.+
T Consensus       184 GD~~~Di~~a~~aG~~~  200 (237)
T 4ex6_A          184 GDGVPDAEMGRAAGMTV  200 (237)
T ss_dssp             ESSHHHHHHHHHTTCEE
T ss_pred             cCCHHHHHHHHHCCCeE
Confidence            99998777666677743

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=98.68  E-value=2.1e-08  Score=83.36  Aligned_cols=92  Identities=10%  Similarity=0.039  Sum_probs=70.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCch---------------hhHHHHHHHhcCCCceeEEEe-----cCcccccCC-
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLE---------------GYARPLVDRIDGENLFSLRLY-----RPSTTSTEY-  209 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~---------------~YA~~Vl~~LDp~~~f~~~l~-----r~~c~~~k~-  209 (285)
                      +...||+.++|+.|++. +.++|.|++..               .+++.+++.++  .+|...++     .+.|...|. 
T Consensus        26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~KP~  103 (179)
T 3l8h_A           26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDDGCACRKPL  103 (179)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTSCCSSSTTS
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCCCCCCCCCC
Confidence            34689999999999988 99999999987               67777888777  34555554     244443333 


Q ss_pred             -ccccccccccCCCCCcEEEEECCcccccCCCCCeee
Q 023259          210 -REHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       210 -~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~  245 (285)
                       ..+.+-++.+|.+++++++|+|+..-.......|+.
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~  140 (179)
T 3l8h_A          104 PGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCA  140 (179)
T ss_dssp             SHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCE
T ss_pred             HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCc
Confidence             256778888999999999999999877666666754

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=98.66  E-value=8.9e-10  Score=92.94  Aligned_cols=112  Identities=10%  Similarity=-0.001  Sum_probs=88.7

Q ss_pred             EEeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHH------hcCCCceeEEEecCcccccCCc--cccccccccCCC
Q 023259          151 TVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDR------IDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKD  222 (285)
Q Consensus       151 ~V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~------LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrd  222 (285)
                      .....||+.++|+.|++.+.++|.|++...+++.+++.      ++...+|..+++.+.+...+..  .+.+-++.+|.+
T Consensus        87 ~~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~  166 (211)
T 2i6x_A           87 LEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMK  166 (211)
T ss_dssp             EEEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCC
T ss_pred             hcccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCC
Confidence            35778999999999998899999999999999999888      5666788888887766555443  566777888999


Q ss_pred             CCcEEEEECCcccccCCCCCeeeeCccCCCCCCCCccCcHHHHHhh
Q 023259          223 LCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQKDVRPELYER  268 (285)
Q Consensus       223 l~~vVIVDDs~~~~~~~p~NgI~I~~F~~g~~~D~~~DVR~vL~~~  268 (285)
                      ++++++|+|++.........|+.+--+..+      .+++..|++.
T Consensus       167 ~~~~~~igD~~~Di~~a~~aG~~~~~~~~~------~~~~~~l~~~  206 (211)
T 2i6x_A          167 PEETLFIDDGPANVATAERLGFHTYCPDNG------ENWIPAITRL  206 (211)
T ss_dssp             GGGEEEECSCHHHHHHHHHTTCEEECCCTT------CCCHHHHHHH
T ss_pred             hHHeEEeCCCHHHHHHHHHcCCEEEEECCH------HHHHHHHHHH
Confidence            999999999999887777788876655433      4566666543

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=98.66  E-value=1.4e-08  Score=86.46  Aligned_cols=96  Identities=16%  Similarity=0.104  Sum_probs=79.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|.|++...+++.+++.++...+|..++..+.+...|..  .+.+-++.+|.+++++++
T Consensus        98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  177 (233)
T 3umb_A           98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILF  177 (233)
T ss_dssp             CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEEE
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEEE
Confidence            56789999999999988 999999999999999999999988899999888876655543  567778889999999999


Q ss_pred             EECCcccccCCCCCeeeeC
Q 023259          229 VDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~  247 (285)
                      |+|+..-.......|+.+-
T Consensus       178 vGD~~~Di~~a~~~G~~~~  196 (233)
T 3umb_A          178 VSSNGWDACGATWHGFTTF  196 (233)
T ss_dssp             EESCHHHHHHHHHHTCEEE
T ss_pred             EeCCHHHHHHHHHcCCEEE
Confidence            9999876655555555443

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=98.64  E-value=6.5e-09  Score=91.45  Aligned_cols=95  Identities=8%  Similarity=0.034  Sum_probs=77.4

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      ...||+.++|+.|++. +.+++-|+  ...+..+++.++..++|+.+++.+.+...|+.  .|.+-++++|.+++++|+|
T Consensus       116 ~~~p~~~~ll~~Lk~~g~~i~i~~~--~~~~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~V  193 (250)
T 4gib_A          116 DILPGIESLLIDVKSNNIKIGLSSA--SKNAINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGI  193 (250)
T ss_dssp             GSCTTHHHHHHHHHHTTCEEEECCS--CTTHHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred             ccchhHHHHHHHHHhcccccccccc--cchhhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeEEE
Confidence            3679999999999977 77776444  45688899999999999999998887765544  6888999999999999999


Q ss_pred             ECCcccccCCCCCeeeeCcc
Q 023259          230 DNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I~~F  249 (285)
                      +|++.........|+.+--+
T Consensus       194 GDs~~Di~aA~~aG~~~i~v  213 (250)
T 4gib_A          194 EDASAGIDAINSANMFSVGV  213 (250)
T ss_dssp             ESSHHHHHHHHHTTCEEEEE
T ss_pred             CCCHHHHHHHHHcCCEEEEE
Confidence            99998877777777755433

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=98.64  E-value=3e-08  Score=84.01  Aligned_cols=95  Identities=15%  Similarity=0.080  Sum_probs=78.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.+++. +.++|.|++...+++.+++.++...+|..+++.+.+...+..  .+.+-++.+|.+++++++
T Consensus        95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  174 (230)
T 3um9_A           95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEILF  174 (230)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEEE
Confidence            45789999999999988 999999999999999999999988889999888876554433  566778889999999999


Q ss_pred             EECCcccccCCCCCeeee
Q 023259          229 VDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I  246 (285)
                      |+|+..-.......|+.+
T Consensus       175 iGD~~~Di~~a~~aG~~~  192 (230)
T 3um9_A          175 VSCNSWDATGAKYFGYPV  192 (230)
T ss_dssp             EESCHHHHHHHHHHTCCE
T ss_pred             EeCCHHHHHHHHHCCCEE
Confidence            999997665554555433

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=98.61  E-value=3.4e-09  Score=89.42  Aligned_cols=94  Identities=17%  Similarity=0.145  Sum_probs=76.5

Q ss_pred             EEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce--eEEEecCcccccCC--ccccccccccCCCCCc
Q 023259          151 TVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF--SLRLYRPSTTSTEY--REHVKDLSCLSKDLCR  225 (285)
Q Consensus       151 ~V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f--~~~l~r~~c~~~k~--~~~~KdL~~Lgrdl~~  225 (285)
                      .....||+.++|+.+++. +.++|.|++...+++.+++.++...+|  ..++..+. ...+.  ..+.+-++.+|.++++
T Consensus        68 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~~kp~~~~~~~~~~~~g~~~~~  146 (205)
T 3m9l_A           68 GSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-APPKPHPGGLLKLAEAWDVSPSR  146 (205)
T ss_dssp             EEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SCCTTSSHHHHHHHHHTTCCGGG
T ss_pred             cCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CCCCCCHHHHHHHHHHcCCCHHH
Confidence            367899999999999988 999999999999999999999988888  66776554 32232  2566777888999999


Q ss_pred             EEEEECCcccccCCCCCeee
Q 023259          226 TLIVDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       226 vVIVDDs~~~~~~~p~NgI~  245 (285)
                      ++.|+|+..-.......|+.
T Consensus       147 ~i~iGD~~~Di~~a~~aG~~  166 (205)
T 3m9l_A          147 MVMVGDYRFDLDCGRAAGTR  166 (205)
T ss_dssp             EEEEESSHHHHHHHHHHTCE
T ss_pred             EEEECCCHHHHHHHHHcCCE
Confidence            99999999877665555653

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=98.61  E-value=1.5e-08  Score=86.56  Aligned_cols=94  Identities=15%  Similarity=0.093  Sum_probs=77.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|.|++...+++.+++.++...+|..++..+.+...|..  .+.+-++.+|.+++++++
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  173 (232)
T 1zrn_A           94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF  173 (232)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            46789999999999987 999999999999999999999888889999888776554443  466677888999999999


Q ss_pred             EECCcccccCCCCCeee
Q 023259          229 VDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~  245 (285)
                      |+|+..-.......|+.
T Consensus       174 iGD~~~Di~~a~~aG~~  190 (232)
T 1zrn_A          174 VASNAWDATGARYFGFP  190 (232)
T ss_dssp             EESCHHHHHHHHHHTCC
T ss_pred             EeCCHHHHHHHHHcCCE
Confidence            99998655544444543

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=98.60  E-value=7e-09  Score=89.18  Aligned_cols=94  Identities=17%  Similarity=0.176  Sum_probs=78.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|.|++...+++.+++.++...+|..++..+.+...|+.  .+.+-++.+|.+++++++
T Consensus        82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  161 (222)
T 2nyv_A           82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALI  161 (222)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEE
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEE
Confidence            56899999999999987 999999999999999999999988889988887765544432  456677888999999999


Q ss_pred             EECCcccccCCCCCeee
Q 023259          229 VDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~  245 (285)
                      |+|+..-.......|+.
T Consensus       162 vGD~~~Di~~a~~aG~~  178 (222)
T 2nyv_A          162 VGDTDADIEAGKRAGTK  178 (222)
T ss_dssp             EESSHHHHHHHHHHTCE
T ss_pred             ECCCHHHHHHHHHCCCe
Confidence            99998777655556654

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=98.59  E-value=1.3e-08  Score=87.64  Aligned_cols=93  Identities=11%  Similarity=0.025  Sum_probs=76.6

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.+++. +.++|.|++...+++.+++.++...+|..+++.+.+...+..  .+.+-++.+|.+++++++
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  183 (240)
T 2no4_A          104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCF  183 (240)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            45679999999999987 999999999999999999999888889998888776544433  466677888999999999


Q ss_pred             EECCcccccCCCCCee
Q 023259          229 VDNNPFSFLLQPLNGI  244 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI  244 (285)
                      |+|+..-.......|+
T Consensus       184 iGD~~~Di~~a~~aG~  199 (240)
T 2no4_A          184 VSSNAWDLGGAGKFGF  199 (240)
T ss_dssp             EESCHHHHHHHHHHTC
T ss_pred             EeCCHHHHHHHHHCCC
Confidence            9999866554445553

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=98.57  E-value=3e-08  Score=87.98  Aligned_cols=93  Identities=16%  Similarity=0.113  Sum_probs=77.0

Q ss_pred             EeeCccHHHHHHHhhhc-c--eEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccc----cCC--ccccccccccCCC
Q 023259          152 VFERPGLREFLKQLSEF-A--DLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS----TEY--REHVKDLSCLSKD  222 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-y--eIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~----~k~--~~~~KdL~~Lgrd  222 (285)
                      +...||+.++|+.+++. +  .++|.|++...+++.+++.++...+|+.+++.+.+..    .+.  ..+.+-++.+|.+
T Consensus       141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~  220 (282)
T 3nuq_A          141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLA  220 (282)
T ss_dssp             CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTCC
T ss_pred             cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcCCC
Confidence            56789999999999986 8  9999999999999999999999999999887765422    122  2466778889999


Q ss_pred             C-CcEEEEECCcccccCCCCCee
Q 023259          223 L-CRTLIVDNNPFSFLLQPLNGI  244 (285)
Q Consensus       223 l-~~vVIVDDs~~~~~~~p~NgI  244 (285)
                      + +++|+|+|+..-.......|+
T Consensus       221 ~~~~~i~vGD~~~Di~~a~~aG~  243 (282)
T 3nuq_A          221 RYENAYFIDDSGKNIETGIKLGM  243 (282)
T ss_dssp             CGGGEEEEESCHHHHHHHHHHTC
T ss_pred             CcccEEEEcCCHHHHHHHHHCCC
Confidence            8 999999999987766666666

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=98.56  E-value=6.8e-09  Score=91.08  Aligned_cols=93  Identities=12%  Similarity=0.144  Sum_probs=77.7

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      ...||+.++|+.|.+. +.+++.|++.  .+..+++.++...+|+.++..++....|..  .|.+-++++|.+++++|+|
T Consensus        95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~V  172 (243)
T 4g9b_A           95 AVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGI  172 (243)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEEE
T ss_pred             cccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHEEEE
Confidence            3689999999999877 8999998764  578899999999999999998887665543  6889999999999999999


Q ss_pred             ECCcccccCCCCCeeeeC
Q 023259          230 DNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I~  247 (285)
                      +|++.........|+.+-
T Consensus       173 gDs~~di~aA~~aG~~~I  190 (243)
T 4g9b_A          173 EDAQAGIDAINASGMRSV  190 (243)
T ss_dssp             ESSHHHHHHHHHHTCEEE
T ss_pred             cCCHHHHHHHHHcCCEEE
Confidence            999988776666666543

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=98.56  E-value=6e-09  Score=88.33  Aligned_cols=93  Identities=9%  Similarity=0.140  Sum_probs=79.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.+++. +.++|.|++...+++.+++.++...+|..+++.+.....+..  .+.+-++.+|.++++++.
T Consensus        85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~  164 (226)
T 3mc1_A           85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIM  164 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEE
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEE
Confidence            45789999999999988 999999999999999999999988899998888776544332  566778889999999999


Q ss_pred             EECCcccccCCCCCee
Q 023259          229 VDNNPFSFLLQPLNGI  244 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI  244 (285)
                      |+|+..-.......|+
T Consensus       165 iGD~~~Di~~a~~aG~  180 (226)
T 3mc1_A          165 IGDREYDVIGALKNNL  180 (226)
T ss_dssp             EESSHHHHHHHHTTTC
T ss_pred             ECCCHHHHHHHHHCCC
Confidence            9999987777677777

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=98.56  E-value=8.7e-09  Score=86.52  Aligned_cols=95  Identities=8%  Similarity=0.031  Sum_probs=75.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCC--ccccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~--~~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...|++.++|+.+.+. +.+++.|++...+++.+++.++...+|...++.+.+...+.  ..+.+-++.+|.++++++.
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~  167 (225)
T 3d6j_A           88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLY  167 (225)
T ss_dssp             CEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEE
Confidence            45689999999999976 99999999999999999999887778888877766543333  2455667788999999999


Q ss_pred             EECCcccccCCCCCeeee
Q 023259          229 VDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I  246 (285)
                      |+|+..-.......|+.+
T Consensus       168 iGD~~nDi~~~~~aG~~~  185 (225)
T 3d6j_A          168 IGDSTVDAGTAAAAGVSF  185 (225)
T ss_dssp             EESSHHHHHHHHHHTCEE
T ss_pred             EcCCHHHHHHHHHCCCeE
Confidence            999997766555556543

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=98.54  E-value=6.7e-08  Score=83.36  Aligned_cols=90  Identities=11%  Similarity=0.097  Sum_probs=68.8

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCc---------------hhhHHHHHHHhcCCCceeEEEecC------------cc
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGL---------------EGYARPLVDRIDGENLFSLRLYRP------------ST  204 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~---------------~~YA~~Vl~~LDp~~~f~~~l~r~------------~c  204 (285)
                      ...||+.++|+.|++. +.++|.|++.               ..+++.+++.++..  |..+++..            .+
T Consensus        50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~~~~  127 (211)
T 2gmw_A           50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQVC  127 (211)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBSCC
T ss_pred             cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccCccC
Confidence            4689999999999987 9999999999               48889999988765  65555432            23


Q ss_pred             cccCC--ccccccccccCCCCCcEEEEECCcccccCCCCCee
Q 023259          205 TSTEY--REHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGI  244 (285)
Q Consensus       205 ~~~k~--~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI  244 (285)
                      ...|.  ..+.+-++.+|.+++++++|+|+..-.......|+
T Consensus       128 ~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~  169 (211)
T 2gmw_A          128 DCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANV  169 (211)
T ss_dssp             SSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTC
T ss_pred             cCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCC
Confidence            32332  24566678889999999999999977766666664

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=98.54  E-value=6.7e-09  Score=90.66  Aligned_cols=94  Identities=16%  Similarity=0.076  Sum_probs=77.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|.|++...+++.+++.++...+|..++..+.+...+..  .+.+-++.+|.+++++++
T Consensus       113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  192 (243)
T 2hsz_A          113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILF  192 (243)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEE
Confidence            46789999999999987 999999999999999999999888889888887766544432  455667788999999999


Q ss_pred             EECCcccccCCCCCeee
Q 023259          229 VDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~  245 (285)
                      |+|+..-.......|+.
T Consensus       193 vGD~~~Di~~a~~aG~~  209 (243)
T 2hsz_A          193 VGDSQNDIFAAHSAGCA  209 (243)
T ss_dssp             EESSHHHHHHHHHHTCE
T ss_pred             EcCCHHHHHHHHHCCCe
Confidence            99998776555555554

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=98.53  E-value=2.7e-08  Score=86.88  Aligned_cols=94  Identities=14%  Similarity=0.085  Sum_probs=77.5

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +...||+.++|+.++ .+.++|.|++...+++.+++.++...+|+.+++.+.+...|..  .+.+-++.+|.+++++++|
T Consensus        92 ~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v  170 (253)
T 1qq5_A           92 LTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFV  170 (253)
T ss_dssp             CCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEE
T ss_pred             CCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEEE
Confidence            457899999999999 9999999999999999999999888889999988876555543  5667778889999999999


Q ss_pred             ECCcccccCCCCCeeee
Q 023259          230 DNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I  246 (285)
                      +|+..-.......|+.+
T Consensus       171 GD~~~Di~~a~~aG~~~  187 (253)
T 1qq5_A          171 SSNGFDVGGAKNFGFSV  187 (253)
T ss_dssp             ESCHHHHHHHHHHTCEE
T ss_pred             eCChhhHHHHHHCCCEE
Confidence            99986655444455443

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=98.53  E-value=6.7e-09  Score=89.39  Aligned_cols=93  Identities=13%  Similarity=0.083  Sum_probs=79.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCC-CCcEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKD-LCRTL  227 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrd-l~~vV  227 (285)
                      ...+||+.++|+.+++. +.++|.|++...+++.+++.++...+|..+++.+.+...++.  .+.+-++.+|.+ +++++
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i  188 (240)
T 3sd7_A          109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVI  188 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEE
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEE
Confidence            46899999999999988 999999999999999999999998899999888876544432  466777888999 99999


Q ss_pred             EEECCcccccCCCCCee
Q 023259          228 IVDNNPFSFLLQPLNGI  244 (285)
Q Consensus       228 IVDDs~~~~~~~p~NgI  244 (285)
                      .|+|++.-.......|+
T Consensus       189 ~vGD~~~Di~~a~~aG~  205 (240)
T 3sd7_A          189 MVGDRKYDIIGAKKIGI  205 (240)
T ss_dssp             EEESSHHHHHHHHHHTC
T ss_pred             EECCCHHHHHHHHHCCC
Confidence            99999977766666666

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=98.53  E-value=1.1e-09  Score=94.25  Aligned_cols=98  Identities=11%  Similarity=-0.025  Sum_probs=80.0

Q ss_pred             eeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHh---cC---CCceeEEEecCcccccCC--ccccccccccCCCCC
Q 023259          153 FERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRI---DG---ENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLC  224 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~L---Dp---~~~f~~~l~r~~c~~~k~--~~~~KdL~~Lgrdl~  224 (285)
                      ...||+.++|+.|++.+.++|.|++...+++.+++.+   ..   ..+|..++..+.+...|.  ..+.+-++.+|.+++
T Consensus       112 ~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~~  191 (229)
T 4dcc_A          112 DIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPK  191 (229)
T ss_dssp             CCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred             hccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCHH
Confidence            3569999999999977999999999999999888665   33   346888888877665554  357788888999999


Q ss_pred             cEEEEECCcccccCCCCCeeeeCccC
Q 023259          225 RTLIVDNNPFSFLLQPLNGIPCIPFS  250 (285)
Q Consensus       225 ~vVIVDDs~~~~~~~p~NgI~I~~F~  250 (285)
                      ++|+|+|++.........|+.+--+.
T Consensus       192 ~~~~vGD~~~Di~~a~~aG~~~i~v~  217 (229)
T 4dcc_A          192 ETFFIDDSEINCKVAQELGISTYTPK  217 (229)
T ss_dssp             GEEEECSCHHHHHHHHHTTCEEECCC
T ss_pred             HeEEECCCHHHHHHHHHcCCEEEEEC
Confidence            99999999988877778888766654

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=98.52  E-value=3.1e-08  Score=83.20  Aligned_cols=93  Identities=16%  Similarity=0.144  Sum_probs=75.6

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +...||+.+ |+.|++.+.++|.|++...+++.+++.++...+|..+++.+.+...|..  .+.+-++.+|  ++++++|
T Consensus        73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~~v  149 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFLV  149 (201)
T ss_dssp             CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCEEE
T ss_pred             cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEEEE
Confidence            467899999 9999855999999999999999999999988889998888776555432  4566677788  8999999


Q ss_pred             ECCcccccCCCCCeeeeC
Q 023259          230 DNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I~  247 (285)
                      +|++.-.......|+.+-
T Consensus       150 GD~~~Di~~a~~aG~~~~  167 (201)
T 2w43_A          150 SSNAFDVIGAKNAGMRSI  167 (201)
T ss_dssp             ESCHHHHHHHHHTTCEEE
T ss_pred             eCCHHHhHHHHHCCCEEE
Confidence            999987766666666543

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=98.47  E-value=2.5e-08  Score=86.95  Aligned_cols=94  Identities=13%  Similarity=-0.023  Sum_probs=78.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc-eeEEEecCcccccCCc--cccccccccCCCC-CcE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL-FSLRLYRPSTTSTEYR--EHVKDLSCLSKDL-CRT  226 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~-f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl-~~v  226 (285)
                      +...||+.++|+.+++. +.++|.|++....++.+++.++..++ |..+++.+.+...+..  .+.+-++.+|.++ +++
T Consensus       110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  189 (277)
T 3iru_A          110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGC  189 (277)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGE
T ss_pred             CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccE
Confidence            46789999999999988 99999999999999999999987777 7888887775544432  5667788899999 999


Q ss_pred             EEEECCcccccCCCCCeee
Q 023259          227 LIVDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       227 VIVDDs~~~~~~~p~NgI~  245 (285)
                      |.|.|+..-.......|+.
T Consensus       190 i~vGD~~~Di~~a~~aG~~  208 (277)
T 3iru_A          190 IKVDDTLPGIEEGLRAGMW  208 (277)
T ss_dssp             EEEESSHHHHHHHHHTTCE
T ss_pred             EEEcCCHHHHHHHHHCCCe
Confidence            9999999877666667754

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=98.46  E-value=1.2e-07  Score=77.66  Aligned_cols=88  Identities=9%  Similarity=-0.040  Sum_probs=69.3

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEEC
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDD  231 (285)
                      ...|+..++|+.|++. +.++|.|++...+++.+++.++...+|..       ...+...+.+-++.++.+.+++++|+|
T Consensus        36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~-------~kp~~~~~~~~~~~~~~~~~~~~~vGD  108 (162)
T 2p9j_A           36 VFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTG-------SYKKLEIYEKIKEKYSLKDEEIGFIGD  108 (162)
T ss_dssp             EEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEEC-------C--CHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred             eecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccC-------CCCCHHHHHHHHHHcCCCHHHEEEECC
Confidence            4578899999999987 99999999999999999999987765543       112223455667778889999999999


Q ss_pred             CcccccCCCCCeeeeC
Q 023259          232 NPFSFLLQPLNGIPCI  247 (285)
Q Consensus       232 s~~~~~~~p~NgI~I~  247 (285)
                      +..-.......|+.+-
T Consensus       109 ~~~Di~~a~~ag~~~~  124 (162)
T 2p9j_A          109 DVVDIEVMKKVGFPVA  124 (162)
T ss_dssp             SGGGHHHHHHSSEEEE
T ss_pred             CHHHHHHHHHCCCeEE
Confidence            9987776667777654

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=98.46  E-value=4e-08  Score=83.48  Aligned_cols=94  Identities=14%  Similarity=0.113  Sum_probs=74.4

Q ss_pred             EeeCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccC-C--ccccccccccC--CCCC
Q 023259          152 VFERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTE-Y--REHVKDLSCLS--KDLC  224 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~--yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k-~--~~~~KdL~~Lg--rdl~  224 (285)
                      +...||+.++|+.+++.  +.++|.|++...+++.+++.++...+|...++.+...... .  ..+.+-++.+|  .+++
T Consensus        92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~  171 (234)
T 2hcf_A           92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPS  171 (234)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGG
T ss_pred             CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCcc
Confidence            56789999999999986  9999999999999999999998888888766665543211 1  12345567788  8999


Q ss_pred             cEEEEECCcccccCCCCCeee
Q 023259          225 RTLIVDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       225 ~vVIVDDs~~~~~~~p~NgI~  245 (285)
                      +++.|.|++.-.......|+.
T Consensus       172 ~~i~iGD~~~Di~~a~~aG~~  192 (234)
T 2hcf_A          172 QIVIIGDTEHDIRCARELDAR  192 (234)
T ss_dssp             GEEEEESSHHHHHHHHTTTCE
T ss_pred             cEEEECCCHHHHHHHHHCCCc
Confidence            999999999877766677744

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=98.45  E-value=6.2e-08  Score=83.25  Aligned_cols=90  Identities=17%  Similarity=0.123  Sum_probs=67.8

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCC-CcEEE
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDL-CRTLI  228 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl-~~vVI  228 (285)
                      ...||+.++|+.|++. +.++|-|+.....+..+++     .+|..++..+++...|..  .+.+-++.+|.+. +++|+
T Consensus        36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~-----~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~  110 (196)
T 2oda_A           36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA-----PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVL  110 (196)
T ss_dssp             SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT-----TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEE
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC-----ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEE
Confidence            3579999999999877 9999999988887744443     356667777765544432  5677888889864 89999


Q ss_pred             EECCcccccCCCCCeeeeC
Q 023259          229 VDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~  247 (285)
                      |.|++.-.......|+.+-
T Consensus       111 VGDs~~Di~aA~~aG~~~i  129 (196)
T 2oda_A          111 ISGDPRLLQSGLNAGLWTI  129 (196)
T ss_dssp             EESCHHHHHHHHHHTCEEE
T ss_pred             EeCCHHHHHHHHHCCCEEE
Confidence            9999987766666676543

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=98.45  E-value=2.4e-08  Score=86.98  Aligned_cols=98  Identities=10%  Similarity=-0.074  Sum_probs=80.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeE-EEecCccc-ccCCc--cccccccccCCCCCcE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSL-RLYRPSTT-STEYR--EHVKDLSCLSKDLCRT  226 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~-~l~r~~c~-~~k~~--~~~KdL~~Lgrdl~~v  226 (285)
                      +...||+.++|+.+++. +.++|.|++...+++.+++.++...+|.. ++..+.+. ..+..  .+.+-++.+|.+++++
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~  188 (259)
T 4eek_A          109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERC  188 (259)
T ss_dssp             CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHE
Confidence            56899999999999986 99999999999999999999988888888 77776655 44432  5667788899999999


Q ss_pred             EEEECCcccccCCCCCeeeeCcc
Q 023259          227 LIVDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       227 VIVDDs~~~~~~~p~NgI~I~~F  249 (285)
                      +.|+|+..-.......|+.+--+
T Consensus       189 i~iGD~~~Di~~a~~aG~~~i~v  211 (259)
T 4eek_A          189 VVIEDSVTGGAAGLAAGATLWGL  211 (259)
T ss_dssp             EEEESSHHHHHHHHHHTCEEEEE
T ss_pred             EEEcCCHHHHHHHHHCCCEEEEE
Confidence            99999998776666667663333

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=98.44  E-value=4e-08  Score=84.12  Aligned_cols=95  Identities=15%  Similarity=0.111  Sum_probs=75.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce--eEEEecCcccccCCc--cccccccccCCCCCcE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF--SLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRT  226 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f--~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~v  226 (285)
                      ....||+.++|+.+++. +.++|.|++...++..+++. +...+|  ..+++.+.+...+..  .+.+-++.+|.+++++
T Consensus       107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~  185 (247)
T 3dv9_A          107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEA  185 (247)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhhe
Confidence            45789999999999988 99999999999999999998 888889  778887776544432  4677888899999999


Q ss_pred             EEEECCcccccCCCCCeeeeC
Q 023259          227 LIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       227 VIVDDs~~~~~~~p~NgI~I~  247 (285)
                      |.|+|+..-.......|+.+-
T Consensus       186 i~vGD~~~Di~~a~~aG~~~i  206 (247)
T 3dv9_A          186 LVIENAPLGVQAGVAAGIFTI  206 (247)
T ss_dssp             EEEECSHHHHHHHHHTTSEEE
T ss_pred             EEEeCCHHHHHHHHHCCCeEE
Confidence            999999987776666775433

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=98.43  E-value=4.1e-08  Score=84.75  Aligned_cols=97  Identities=13%  Similarity=0.099  Sum_probs=79.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce--eEEEecCcccccCCc--cccccccccCCCCCcE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF--SLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRT  226 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f--~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~v  226 (285)
                      ....||+.++|+.|++. +.++|.|++....+..+++. +...+|  ..+++.+.+...+..  .+.+-++.+|.+++++
T Consensus       108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~  186 (243)
T 3qxg_A          108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEA  186 (243)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGE
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHe
Confidence            45789999999999988 99999999999999999998 888889  778887776544432  5677888899999999


Q ss_pred             EEEECCcccccCCCCCeeeeCcc
Q 023259          227 LIVDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       227 VIVDDs~~~~~~~p~NgI~I~~F  249 (285)
                      |.|+|+..-.......|+.+--.
T Consensus       187 i~vGD~~~Di~~a~~aG~~~i~v  209 (243)
T 3qxg_A          187 VVIENAPLGVEAGHKAGIFTIAV  209 (243)
T ss_dssp             EEEECSHHHHHHHHHTTCEEEEE
T ss_pred             EEEeCCHHHHHHHHHCCCEEEEE
Confidence            99999998777666777644433

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=98.42  E-value=8.4e-08  Score=88.78  Aligned_cols=96  Identities=14%  Similarity=0.124  Sum_probs=75.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcc----------cc--cCCccccccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPST----------TS--TEYREHVKDLSC  218 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c----------~~--~k~~~~~KdL~~  218 (285)
                      +..+||+.++|+.|++. +.++|.|++...+++.+++.++...+|...+..++.          ..  .+...+.+-++.
T Consensus       178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~~  257 (317)
T 4eze_A          178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAAR  257 (317)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHH
T ss_pred             CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHHH
Confidence            56899999999999988 999999999999999999999988888766542221          11  111245566677


Q ss_pred             cCCCCCcEEEEECCcccccCCCCCeeeeC
Q 023259          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       219 Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      +|.++++++.|.|+..-.......|+.+-
T Consensus       258 lgv~~~~~i~VGDs~~Di~aa~~AG~~va  286 (317)
T 4eze_A          258 LNIATENIIACGDGANDLPMLEHAGTGIA  286 (317)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             cCCCcceEEEEeCCHHHHHHHHHCCCeEE
Confidence            89999999999999987776666676543

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=98.36  E-value=4.9e-08  Score=84.62  Aligned_cols=98  Identities=13%  Similarity=0.088  Sum_probs=76.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHH-hcCCCceeEEEecC--cccccCCc--cccccccccCCCC--
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDR-IDGENLFSLRLYRP--STTSTEYR--EHVKDLSCLSKDL--  223 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~-LDp~~~f~~~l~r~--~c~~~k~~--~~~KdL~~Lgrdl--  223 (285)
                      +...||+.++|+.|++. +.++|.|++....+...+.. ++...+|..+++.+  .+...|..  .+.+-++.+|.++  
T Consensus       111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~  190 (250)
T 3l5k_A          111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAM  190 (250)
T ss_dssp             CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCG
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCCCc
Confidence            45899999999999988 99999999998877776643 45556788888777  55444432  5677888899988  


Q ss_pred             CcEEEEECCcccccCCCCCeeeeCcc
Q 023259          224 CRTLIVDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       224 ~~vVIVDDs~~~~~~~p~NgI~I~~F  249 (285)
                      +++|.|+|+..-.......|+.+--.
T Consensus       191 ~~~i~iGD~~~Di~~a~~aG~~~i~v  216 (250)
T 3l5k_A          191 EKCLVFEDAPNGVEAALAAGMQVVMV  216 (250)
T ss_dssp             GGEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred             ceEEEEeCCHHHHHHHHHcCCEEEEE
Confidence            99999999998777777777544444

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=98.36  E-value=4.7e-09  Score=87.91  Aligned_cols=100  Identities=12%  Similarity=0.005  Sum_probs=79.6

Q ss_pred             EEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHH-hcCCCceeEEEecCcccccCCc--cccccccccCCCCCcE
Q 023259          151 TVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDR-IDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRT  226 (285)
Q Consensus       151 ~V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~-LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~v  226 (285)
                      ++...||+.++|+.+++. +.++|.|++...+++.+++. ++...+|..++..+.+...|..  .+.+-++.+|.+.+++
T Consensus        89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~  168 (206)
T 2b0c_A           89 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDT  168 (206)
T ss_dssp             EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred             hcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHe
Confidence            367899999999999966 99999999999888777766 5555678888887766544433  4667778889999999


Q ss_pred             EEEECCcccccCCCCCeeeeCccC
Q 023259          227 LIVDNNPFSFLLQPLNGIPCIPFS  250 (285)
Q Consensus       227 VIVDDs~~~~~~~p~NgI~I~~F~  250 (285)
                      ++|+|++.........|+.+--+.
T Consensus       169 ~~vgD~~~Di~~a~~aG~~~~~~~  192 (206)
T 2b0c_A          169 VFFDDNADNIEGANQLGITSILVK  192 (206)
T ss_dssp             EEEESCHHHHHHHHTTTCEEEECC
T ss_pred             EEeCCCHHHHHHHHHcCCeEEEec
Confidence            999999988777777788765554

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=98.33  E-value=2.4e-07  Score=79.08  Aligned_cols=95  Identities=17%  Similarity=0.240  Sum_probs=69.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC--CceeEEEe--------cCccc------ccCCccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE--NLFSLRLY--------RPSTT------STEYREHVK  214 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~--~~f~~~l~--------r~~c~------~~k~~~~~K  214 (285)
                      +..+||+.++|+.|++. +.++|.|++...+++.+++.++..  .+|..+++        ..+..      ..|...+.+
T Consensus        85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~  164 (225)
T 1nnl_A           85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKL  164 (225)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHH
Confidence            46799999999999987 999999999999999999999876  37766541        11111      011122334


Q ss_pred             cccccCCCCCcEEEEECCcccccCCCCCeeeeCcc
Q 023259          215 DLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       215 dL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~~F  249 (285)
                      -++.+|.  +++++|+|++.-.......|+ .--|
T Consensus       165 ~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~  196 (225)
T 1nnl_A          165 LKEKFHF--KKIIMIGDGATDMEACPPADA-FIGF  196 (225)
T ss_dssp             HHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEE
T ss_pred             HHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEe
Confidence            4455565  789999999988888887888 3345

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=98.33  E-value=1.2e-06  Score=83.88  Aligned_cols=110  Identities=15%  Similarity=0.179  Sum_probs=80.7

Q ss_pred             CCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-ce
Q 023259           92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-AD  170 (285)
Q Consensus        92 ~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-ye  170 (285)
                      ...+.++||+||||+.......++.         .                .    . -+...-||+.++|+.|++. |.
T Consensus        56 ~~~k~v~fD~DGTL~~~~~~~~~~~---------~----------------~----~-~~~~~~pgv~e~L~~L~~~G~~  105 (416)
T 3zvl_A           56 PQGKVAAFDLDGTLITTRSGKVFPT---------S----------------P----S-DWRILYPEIPKKLQELAAEGYK  105 (416)
T ss_dssp             CCSSEEEECSBTTTEECSSCSSSCS---------S----------------T----T-CCEESCTTHHHHHHHHHHTTCE
T ss_pred             CCCeEEEEeCCCCccccCCCccCCC---------C----------------H----H-HhhhhcccHHHHHHHHHHCCCe
Confidence            3578999999999997421100100         0                0    0 0133679999999999988 99


Q ss_pred             EEEEccCc------------hhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccC----CCCCcEEEEECC
Q 023259          171 LILFTAGL------------EGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLS----KDLCRTLIVDNN  232 (285)
Q Consensus       171 IvI~Ta~~------------~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lg----rdl~~vVIVDDs  232 (285)
                      ++|.|+..            ..+++.+++.++..  |..++..+.|...|..  .+.+-++.+|    .+++++++|.|+
T Consensus       106 l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs  183 (416)
T 3zvl_A          106 LVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDA  183 (416)
T ss_dssp             EEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSC
T ss_pred             EEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECC
Confidence            99999965            33488888888774  7888888887665543  5667777786    899999999999


Q ss_pred             c
Q 023259          233 P  233 (285)
Q Consensus       233 ~  233 (285)
                      .
T Consensus       184 ~  184 (416)
T 3zvl_A          184 A  184 (416)
T ss_dssp             S
T ss_pred             C
Confidence            7

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=98.30  E-value=2.3e-07  Score=79.84  Aligned_cols=95  Identities=7%  Similarity=-0.037  Sum_probs=75.5

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +...|++.++|+.+++.+.++|.|++...+++.+++.++..  |..+++.+.+...+..  .+.+-++.+|.++++++.|
T Consensus       119 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~i  196 (254)
T 3umc_A          119 LRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVMLC  196 (254)
T ss_dssp             CEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChHHEEEE
Confidence            45679999999999988999999999999999999998775  7777776655444332  5667788899999999999


Q ss_pred             ECCcccccCCCCCeeeeCc
Q 023259          230 DNNPFSFLLQPLNGIPCIP  248 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I~~  248 (285)
                      +|+..-.......|+.+--
T Consensus       197 GD~~~Di~~a~~aG~~~~~  215 (254)
T 3umc_A          197 AAHNYDLKAARALGLKTAF  215 (254)
T ss_dssp             ESCHHHHHHHHHTTCEEEE
T ss_pred             cCchHhHHHHHHCCCeEEE
Confidence            9998776655556655433

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=98.30  E-value=1.3e-07  Score=77.68  Aligned_cols=86  Identities=12%  Similarity=0.040  Sum_probs=67.3

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEECC
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNN  232 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs  232 (285)
                      .+.++  .|+.|++. +.++|.|++....++.+++.++...+|...       ..+...+.+-++.++.++++++.|.|+
T Consensus        34 ~~~~~--~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~~-------kpk~~~~~~~~~~~~~~~~~~~~vGD~  104 (164)
T 3e8m_A           34 TSDSA--GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQGV-------VDKLSAAEELCNELGINLEQVAYIGDD  104 (164)
T ss_dssp             GGGHH--HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECSC-------SCHHHHHHHHHHHHTCCGGGEEEECCS
T ss_pred             CChHH--HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeeccc-------CChHHHHHHHHHHcCCCHHHEEEECCC
Confidence            34443  79999987 999999999999999999999877665442       122234566677789999999999999


Q ss_pred             cccccCCCCCeeeeCc
Q 023259          233 PFSFLLQPLNGIPCIP  248 (285)
Q Consensus       233 ~~~~~~~p~NgI~I~~  248 (285)
                      ..-.......|+.+-.
T Consensus       105 ~~Di~~~~~ag~~~~~  120 (164)
T 3e8m_A          105 LNDAKLLKRVGIAGVP  120 (164)
T ss_dssp             GGGHHHHTTSSEEECC
T ss_pred             HHHHHHHHHCCCeEEc
Confidence            9888777778886654

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=98.25  E-value=6.1e-07  Score=77.33  Aligned_cols=91  Identities=18%  Similarity=0.138  Sum_probs=67.2

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCch---------------hhHHHHHHHhcCCCceeEEEec------------Ccc
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGLE---------------GYARPLVDRIDGENLFSLRLYR------------PST  204 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~~---------------~YA~~Vl~~LDp~~~f~~~l~r------------~~c  204 (285)
                      ...||+.++|+.|++. +.++|.|++..               ..++.+++.++..  |...+.+            +.+
T Consensus        56 ~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g~~~~~~~~~  133 (218)
T 2o2x_A           56 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVGPLAIPDH  133 (218)
T ss_dssp             CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCSTTCCSSC
T ss_pred             eECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCCCceeecccCC
Confidence            3689999999999987 99999999988               7888888887653  4433322            333


Q ss_pred             cccCC--ccccccccccCCCCCcEEEEECCcccccCCCCCeee
Q 023259          205 TSTEY--REHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       205 ~~~k~--~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~  245 (285)
                      ...|.  ..+.+-++.+|.+++++++|.|+..-.......|+.
T Consensus       134 ~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~  176 (218)
T 2o2x_A          134 PMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLA  176 (218)
T ss_dssp             TTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCS
T ss_pred             ccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCC
Confidence            33332  245666778899999999999999766665566653

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=98.22  E-value=5.3e-07  Score=76.64  Aligned_cols=86  Identities=13%  Similarity=0.021  Sum_probs=66.3

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEEC
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDD  231 (285)
                      ..+++.  +|+.|++. +.++|.|++....++.+++.++...+|...       ..|...+.+-++.+|.+.++++.|.|
T Consensus        48 ~~~~~~--~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~-------~~K~~~~~~~~~~~g~~~~~~~~vGD  118 (189)
T 3mn1_A           48 NTLDGQ--GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR-------EDKLVVLDKLLAELQLGYEQVAYLGD  118 (189)
T ss_dssp             EHHHHH--HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC-------SCHHHHHHHHHHHHTCCGGGEEEEEC
T ss_pred             ccccHH--HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc-------CChHHHHHHHHHHcCCChhHEEEECC
Confidence            344444  89999987 999999999999999999999987766543       22223455566778999999999999


Q ss_pred             CcccccCCCCCeeeeC
Q 023259          232 NPFSFLLQPLNGIPCI  247 (285)
Q Consensus       232 s~~~~~~~p~NgI~I~  247 (285)
                      +..-.......|+.+-
T Consensus       119 ~~nDi~~~~~ag~~~~  134 (189)
T 3mn1_A          119 DLPDLPVIRRVGLGMA  134 (189)
T ss_dssp             SGGGHHHHHHSSEEEE
T ss_pred             CHHHHHHHHHCCCeEE
Confidence            9987766666666553

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=98.20  E-value=2.2e-07  Score=78.58  Aligned_cols=81  Identities=11%  Similarity=0.102  Sum_probs=58.6

Q ss_pred             EeeCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~--yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +...||+.++|+.|++.  +.++|.|++...+++.+++.++.   |..++..+            -++.+|.+++++++|
T Consensus        72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~~------------~~~~~~~~~~~~~~v  136 (193)
T 2i7d_A           72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGPQ------------FVERIILTRDKTVVL  136 (193)
T ss_dssp             CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCHH------------HHTTEEECSCGGGBC
T ss_pred             CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCHH------------HHHHcCCCcccEEEE
Confidence            45789999999999985  99999999999999999998876   44333221            355667777888887


Q ss_pred             ECCccc----ccCCC-CCeeeeC
Q 023259          230 DNNPFS----FLLQP-LNGIPCI  247 (285)
Q Consensus       230 DDs~~~----~~~~p-~NgI~I~  247 (285)
                      .|+...    ..... ..|+.+-
T Consensus       137 gDs~~dD~~~i~~A~~~aG~~~i  159 (193)
T 2i7d_A          137 GDLLIDDKDTVRGQEETPSWEHI  159 (193)
T ss_dssp             CSEEEESSSCCCSSCSSCSSEEE
T ss_pred             CCchhhCcHHHhhcccccccceE
Confidence            666655    44444 5555443

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.16  E-value=1.3e-06  Score=73.38  Aligned_cols=88  Identities=7%  Similarity=-0.066  Sum_probs=66.8

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEEC
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDD  231 (285)
                      ...|...+.|+.|++. +.++|.|+.....++.+++.++...+|..       ...+...+.+-++.++.++++++.|.|
T Consensus        35 ~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~-------~k~k~~~~~~~~~~~~~~~~~~~~vGD  107 (180)
T 1k1e_A           35 SFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG-------KLEKETACFDLMKQAGVTAEQTAYIGD  107 (180)
T ss_dssp             EEEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES-------CSCHHHHHHHHHHHHTCCGGGEEEEEC
T ss_pred             eeccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC-------CCCcHHHHHHHHHHcCCCHHHEEEECC
Confidence            3567788999999987 99999999999999999999988765532       112222344456677888999999999


Q ss_pred             CcccccCCCCCeeeeC
Q 023259          232 NPFSFLLQPLNGIPCI  247 (285)
Q Consensus       232 s~~~~~~~p~NgI~I~  247 (285)
                      +..-.......|+.+-
T Consensus       108 ~~~Di~~~~~ag~~~~  123 (180)
T 1k1e_A          108 DSVDLPAFAACGTSFA  123 (180)
T ss_dssp             SGGGHHHHHHSSEEEE
T ss_pred             CHHHHHHHHHcCCeEE
Confidence            9987766556666554

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.15  E-value=1.5e-06  Score=75.88  Aligned_cols=118  Identities=12%  Similarity=0.103  Sum_probs=84.4

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023259           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL  171 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-yeI  171 (285)
                      .-+.+||||||||+++...           +..                .+..   -..+..++++  +|+.|++. +.+
T Consensus        48 ~ik~viFDlDGTL~Ds~~~-----------~~~----------------~~~~---~~~~~~~d~~--~L~~L~~~G~~l   95 (211)
T 3ij5_A           48 NIRLLICDVDGVMSDGLIY-----------MGN----------------QGEE---LKAFNVRDGY--GIRCLITSDIDV   95 (211)
T ss_dssp             TCSEEEECCTTTTSSSEEE-----------EET----------------TSCE---EEEEEHHHHH--HHHHHHHTTCEE
T ss_pred             CCCEEEEeCCCCEECCHHH-----------Hhh----------------hhHH---HHHhccchHH--HHHHHHHCCCEE
Confidence            4578999999999986310           000                0000   0113344555  89999987 999


Q ss_pred             EEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccCCCCCeeeeCcc
Q 023259          172 ILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       172 vI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~~F  249 (285)
                      +|.|+.....++.+++.++...+|..+       ..+...+.+-++.+|.+.++++.|-|+..-.......|+.+-.-
T Consensus        96 ~I~T~~~~~~~~~~l~~lgi~~~f~~~-------k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~  166 (211)
T 3ij5_A           96 AIITGRRAKLLEDRANTLGITHLYQGQ-------SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA  166 (211)
T ss_dssp             EEECSSCCHHHHHHHHHHTCCEEECSC-------SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT
T ss_pred             EEEeCCCHHHHHHHHHHcCCchhhccc-------CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC
Confidence            999999999999999999987766543       12223445566778999999999999999888777788776543

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=98.14  E-value=5.5e-07  Score=77.64  Aligned_cols=80  Identities=6%  Similarity=0.001  Sum_probs=62.0

Q ss_pred             HHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccCC
Q 023259          161 FLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQ  239 (285)
Q Consensus       161 FL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~  239 (285)
                      -|+.|++. +.++|.|++....++.+++.++...+|...       ..+...+.+-++.++.++++++.|.|+..-....
T Consensus        60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~~-------k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~  132 (195)
T 3n07_A           60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQGQ-------DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVM  132 (195)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECSC-------SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHH
T ss_pred             HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeCC-------CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHH
Confidence            38999887 999999999999999999999877655332       1222244555667889999999999999887766


Q ss_pred             CCCeeeeC
Q 023259          240 PLNGIPCI  247 (285)
Q Consensus       240 p~NgI~I~  247 (285)
                      ...|+.+-
T Consensus       133 ~~ag~~va  140 (195)
T 3n07_A          133 EKVALRVC  140 (195)
T ss_dssp             TTSSEEEE
T ss_pred             HHCCCEEE
Confidence            66777654

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=98.11  E-value=1.1e-06  Score=83.31  Aligned_cols=96  Identities=14%  Similarity=0.113  Sum_probs=74.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCccc----------ccC--Cccccccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTT----------STE--YREHVKDLSC  218 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~----------~~k--~~~~~KdL~~  218 (285)
                      +..+||+.++|+.|++. +.++|.|++...+++.+++.++...+|...+.-.+..          ..+  ...+.+-++.
T Consensus       255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~  334 (415)
T 3p96_A          255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQR  334 (415)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHH
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHH
Confidence            57899999999999988 9999999999999999999999887776543211111          011  1145566677


Q ss_pred             cCCCCCcEEEEECCcccccCCCCCeeeeC
Q 023259          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       219 Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      +|.++++++.|.|+..-.......|+.+-
T Consensus       335 ~gi~~~~~i~vGD~~~Di~~a~~aG~~va  363 (415)
T 3p96_A          335 AGVPMAQTVAVGDGANDIDMLAAAGLGIA  363 (415)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             cCcChhhEEEEECCHHHHHHHHHCCCeEE
Confidence            89999999999999988776666777654

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=98.07  E-value=5.1e-07  Score=76.62  Aligned_cols=78  Identities=14%  Similarity=0.169  Sum_probs=54.5

Q ss_pred             EeeCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHHHhcCCC-ceeEEEecCcccccCCccccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~--yeIvI~Ta~~~~YA~~Vl~~LDp~~-~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++.  +.++|.|++....++.++++++..+ +|.                .+-++.++.+++++++
T Consensus        74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~----------------~~~~~~l~~~~~~~~~  137 (197)
T 1q92_A           74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG----------------PDFLEQIVLTRDKTVV  137 (197)
T ss_dssp             CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC----------------GGGGGGEEECSCSTTS
T ss_pred             CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch----------------HHHHHHhccCCccEEE
Confidence            46789999999999984  9999999999999998988887655 664                2234445555666666


Q ss_pred             -----EECCcccccCCC-CCeeee
Q 023259          229 -----VDNNPFSFLLQP-LNGIPC  246 (285)
Q Consensus       229 -----VDDs~~~~~~~p-~NgI~I  246 (285)
                           +||++. ..... ..|+.+
T Consensus       138 vgDs~~dD~~~-~~~a~~~aG~~~  160 (197)
T 1q92_A          138 SADLLIDDRPD-ITGAEPTPSWEH  160 (197)
T ss_dssp             CCSEEEESCSC-CCCSCSSCSSEE
T ss_pred             ECcccccCCch-hhhcccCCCceE
Confidence                 444443 33344 445443

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=98.06  E-value=7.4e-07  Score=76.09  Aligned_cols=79  Identities=9%  Similarity=0.010  Sum_probs=62.8

Q ss_pred             HHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccCC
Q 023259          161 FLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQ  239 (285)
Q Consensus       161 FL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~  239 (285)
                      -|+.|++. +.++|.|++....++.+++.++...+|...       ..+...+.+-++.++.++++++.|.|+..-....
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~~-------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~  126 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQ-------VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLI  126 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECSC-------SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeCC-------CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence            48999887 999999999999999999999877655433       1222345566777899999999999999877766


Q ss_pred             CCCeeee
Q 023259          240 PLNGIPC  246 (285)
Q Consensus       240 p~NgI~I  246 (285)
                      ...|+.+
T Consensus       127 ~~ag~~~  133 (191)
T 3n1u_A          127 QQVGLGV  133 (191)
T ss_dssp             HHSSEEE
T ss_pred             HHCCCEE
Confidence            6777776

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=98.05  E-value=2.2e-07  Score=87.90  Aligned_cols=96  Identities=9%  Similarity=-0.085  Sum_probs=73.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccC------chhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCC
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAG------LEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKD  222 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~------~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrd  222 (285)
                      +...||+.++|+.|++. +.++|.|++      ........+.  +...+|+.+++.+++...|..  .|.+-++++|.+
T Consensus        99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~  176 (555)
T 3i28_A           99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--ELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKAS  176 (555)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred             cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCC
Confidence            56789999999999988 999999998      3333333332  334578999988877666654  688899999999


Q ss_pred             CCcEEEEECCcccccCCCCCeeeeCcc
Q 023259          223 LCRTLIVDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       223 l~~vVIVDDs~~~~~~~p~NgI~I~~F  249 (285)
                      ++++++|+|+..........|+.+--+
T Consensus       177 p~~~~~v~D~~~di~~a~~aG~~~~~~  203 (555)
T 3i28_A          177 PSEVVFLDDIGANLKPARDLGMVTILV  203 (555)
T ss_dssp             GGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred             hhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence            999999999998776666666655444

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=97.97  E-value=9.7e-07  Score=74.17  Aligned_cols=83  Identities=12%  Similarity=0.043  Sum_probs=62.3

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEECC
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNN  232 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs  232 (285)
                      .++++  +|+.|++. +.++|.|++...+++.+++.++.. +|...       ..+...+.+-++.++.+.++++.|.|+
T Consensus        42 ~~~~~--~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~~~~-------~~k~~~l~~~~~~~~~~~~~~~~vGD~  111 (176)
T 3mmz_A           42 RGDGL--GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-VLHGI-------DRKDLALKQWCEEQGIAPERVLYVGND  111 (176)
T ss_dssp             HHHHH--HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EEESC-------SCHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred             cccHH--HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eEeCC-------CChHHHHHHHHHHcCCCHHHEEEEcCC
Confidence            34444  89999887 999999999999999999999876 33321       122234556667789999999999999


Q ss_pred             cccccCCCCCeeee
Q 023259          233 PFSFLLQPLNGIPC  246 (285)
Q Consensus       233 ~~~~~~~p~NgI~I  246 (285)
                      ..-.......|+.+
T Consensus       112 ~nD~~~~~~ag~~v  125 (176)
T 3mmz_A          112 VNDLPCFALVGWPV  125 (176)
T ss_dssp             GGGHHHHHHSSEEE
T ss_pred             HHHHHHHHHCCCeE
Confidence            98776655566554

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=97.97  E-value=4.5e-06  Score=73.82  Aligned_cols=93  Identities=12%  Similarity=0.105  Sum_probs=78.5

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +...||+.++|+.|++.+.++|.|++....++.+++.++...+|+.+++.+++...|..  .+.+-++.+|.+++++++|
T Consensus       120 ~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v  199 (260)
T 2gfh_A          120 MILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMV  199 (260)
T ss_dssp             CCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEEEE
Confidence            45679999999999988999999999999999999999999999999988876655543  5777888899999999999


Q ss_pred             ECC-cccccCCCCCee
Q 023259          230 DNN-PFSFLLQPLNGI  244 (285)
Q Consensus       230 DDs-~~~~~~~p~NgI  244 (285)
                      +|+ ..-.......|+
T Consensus       200 GDs~~~Di~~A~~aG~  215 (260)
T 2gfh_A          200 GDTLETDIQGGLNAGL  215 (260)
T ss_dssp             ESCTTTHHHHHHHTTC
T ss_pred             CCCchhhHHHHHHCCC
Confidence            996 666655555565

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=97.93  E-value=4e-06  Score=69.10  Aligned_cols=92  Identities=14%  Similarity=0.177  Sum_probs=65.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCccccc-C--CccccccccccCCCCCcEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTST-E--YREHVKDLSCLSKDLCRTL  227 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~-k--~~~~~KdL~~Lgrdl~~vV  227 (285)
                      +..+||+.++|+.+++. +.++|.|++...+++.+ +.++...++....+.+..... +  ......-++.+  ++++++
T Consensus        78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~~i  154 (201)
T 4ap9_A           78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGFIL  154 (201)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTSCEE
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--CcCcEE
Confidence            46899999999999988 99999999999999988 888766554444333321111 0  01122334445  889999


Q ss_pred             EEECCcccccCCCCCeeee
Q 023259          228 IVDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       228 IVDDs~~~~~~~p~NgI~I  246 (285)
                      .|.|+..-.......|+.|
T Consensus       155 ~iGD~~~Di~~~~~ag~~v  173 (201)
T 4ap9_A          155 AMGDGYADAKMFERADMGI  173 (201)
T ss_dssp             EEECTTCCHHHHHHCSEEE
T ss_pred             EEeCCHHHHHHHHhCCceE
Confidence            9999998777666667664

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=97.92  E-value=8e-06  Score=69.02  Aligned_cols=82  Identities=9%  Similarity=0.009  Sum_probs=63.4

Q ss_pred             HHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccC
Q 023259          160 EFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLL  238 (285)
Q Consensus       160 eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~  238 (285)
                      .+|+.|++. +.++|.|++....++.+++.++...+|..       ...+...+.+-++.+|.+.++++.|.|+..-...
T Consensus        60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~-------~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~  132 (188)
T 2r8e_A           60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQG-------QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPV  132 (188)
T ss_dssp             HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECS-------CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHH
T ss_pred             HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecC-------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHH
Confidence            489999887 99999999999999999999987655432       1222234555566778889999999999988777


Q ss_pred             CCCCeeeeCc
Q 023259          239 QPLNGIPCIP  248 (285)
Q Consensus       239 ~p~NgI~I~~  248 (285)
                      ....|+.+--
T Consensus       133 a~~ag~~~~~  142 (188)
T 2r8e_A          133 MEKVGLSVAV  142 (188)
T ss_dssp             HTTSSEEEEC
T ss_pred             HHHCCCEEEe
Confidence            7777887643

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=97.90  E-value=6.9e-06  Score=68.18  Aligned_cols=95  Identities=14%  Similarity=0.124  Sum_probs=68.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCc-----------cc-ccCCccccccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPS-----------TT-STEYREHVKDLSC  218 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~-----------c~-~~k~~~~~KdL~~  218 (285)
                      ....|++.++|+.+.+. +.++|+|++...+++.+++.++...+|...+...+           +. ..|...+.+-++.
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~  154 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKI  154 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHHH
Confidence            34679999999999987 99999999999999999998887665544332111           10 0111133444566


Q ss_pred             cCCCCCcEEEEECCcccccCCCCCeeee
Q 023259          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       219 Lgrdl~~vVIVDDs~~~~~~~p~NgI~I  246 (285)
                      +|.++++++.|-|+..-.......|+.+
T Consensus       155 lgi~~~~~~~iGD~~~Di~~~~~ag~~~  182 (211)
T 1l7m_A          155 EGINLEDTVAVGDGANDISMFKKAGLKI  182 (211)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHCSEEE
T ss_pred             cCCCHHHEEEEecChhHHHHHHHCCCEE
Confidence            7889999999999998776666667754

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=97.90  E-value=1.1e-05  Score=68.13  Aligned_cols=94  Identities=14%  Similarity=0.033  Sum_probs=78.9

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccC-CCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLS-KDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lg-rdl~~vVI  228 (285)
                      ....||+.++|+.+++.+.++|.|++...+++.+++.++...+|+.+++.+.+...+..  .+.+-++.+| .++++++.
T Consensus       102 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~  181 (238)
T 3ed5_A          102 HQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLI  181 (238)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEE
T ss_pred             CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhHeEE
Confidence            45789999999999977999999999999999999999888899999888876555433  5667788899 99999999


Q ss_pred             EECCc-ccccCCCCCeee
Q 023259          229 VDNNP-FSFLLQPLNGIP  245 (285)
Q Consensus       229 VDDs~-~~~~~~p~NgI~  245 (285)
                      |+|+. .-.......|+.
T Consensus       182 vGD~~~~Di~~a~~aG~~  199 (238)
T 3ed5_A          182 IGDSLTADIKGGQLAGLD  199 (238)
T ss_dssp             EESCTTTTHHHHHHTTCE
T ss_pred             ECCCcHHHHHHHHHCCCE
Confidence            99998 666655566664

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=97.82  E-value=2.7e-05  Score=64.58  Aligned_cols=86  Identities=13%  Similarity=0.294  Sum_probs=62.6

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC--CceeEEE-e-cCcc----cccC--Cccccccccc-cCC
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE--NLFSLRL-Y-RPST----TSTE--YREHVKDLSC-LSK  221 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~--~~f~~~l-~-r~~c----~~~k--~~~~~KdL~~-Lgr  221 (285)
                      .+||+.++|+.+++. +.++|.|++...+++.+++.++..  .+|...+ + .+.+    ...+  .+...+-+.. +|.
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  162 (219)
T 3kd3_A           83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKGL  162 (219)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGGG
T ss_pred             CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhCC
Confidence            789999999999988 999999999999999999999874  3554322 2 2221    1111  1234455544 488


Q ss_pred             CCCcEEEEECCcccccCC
Q 023259          222 DLCRTLIVDNNPFSFLLQ  239 (285)
Q Consensus       222 dl~~vVIVDDs~~~~~~~  239 (285)
                      ++++++.|.|+..-....
T Consensus       163 ~~~~~~~vGD~~~Di~~~  180 (219)
T 3kd3_A          163 IDGEVIAIGDGYTDYQLY  180 (219)
T ss_dssp             CCSEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCHhHHHHH
Confidence            999999999998766543

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=97.82  E-value=6.3e-06  Score=72.05  Aligned_cols=85  Identities=16%  Similarity=0.137  Sum_probs=64.6

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEEC
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDD  231 (285)
                      ..+||+.++|+.|.+. +.++|.|++...+++.+++.++...+|..++..+.      ....|.+....    +++.|-|
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~k------~~~~k~~~~~~----~~~~vGD  213 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHEK------AEKVKEVQQKY----VTAMVGD  213 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGGH------HHHHHHHHTTS----CEEEEEC
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHHH------HHHHHHHHhcC----CEEEEeC
Confidence            6899999999999987 99999999999999999999998777765543322      23334333222    7899999


Q ss_pred             CcccccCCCCCeeeeC
Q 023259          232 NPFSFLLQPLNGIPCI  247 (285)
Q Consensus       232 s~~~~~~~p~NgI~I~  247 (285)
                      +..-.......|+.|-
T Consensus       214 ~~nDi~~~~~Ag~~va  229 (280)
T 3skx_A          214 GVNDAPALAQADVGIA  229 (280)
T ss_dssp             TTTTHHHHHHSSEEEE
T ss_pred             CchhHHHHHhCCceEE
Confidence            9887766666666544

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=97.81  E-value=3.2e-05  Score=64.23  Aligned_cols=79  Identities=16%  Similarity=0.162  Sum_probs=49.4

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCc---hhh--HHHHHHHh-cCCCceeEEEecCcccccCCccccccccccCCCCCc
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGL---EGY--ARPLVDRI-DGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCR  225 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~---~~Y--A~~Vl~~L-Dp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~  225 (285)
                      +...||+.++|+.|++.+.++|-|++.   ...  ....++.. +...++..++..+..             ++    +.
T Consensus        68 ~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~-------------~l----~~  130 (180)
T 3bwv_A           68 LDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN-------------II----LA  130 (180)
T ss_dssp             CCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG-------------GB----CC
T ss_pred             CCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC-------------ee----cc
Confidence            567899999999999889999999983   212  24445543 333344444443320             12    67


Q ss_pred             EEEEECCcccccCCCCCeeeeC
Q 023259          226 TLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       226 vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      +++|||++......-..+|.+.
T Consensus       131 ~l~ieDs~~~i~~aaG~~i~~~  152 (180)
T 3bwv_A          131 DYLIDDNPKQLEIFEGKSIMFT  152 (180)
T ss_dssp             SEEEESCHHHHHHCSSEEEEEC
T ss_pred             cEEecCCcchHHHhCCCeEEeC
Confidence            8999999986543222445444

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=97.76  E-value=6.1e-06  Score=69.12  Aligned_cols=96  Identities=9%  Similarity=-0.000  Sum_probs=79.3

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccC--CccccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTE--YREHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k--~~~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +...||+.++|+.+++.+.++|.|++...+++.+++.++...+|..+++.+.+...|  ...+.+-++.+|.++++++.|
T Consensus        82 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~v  161 (209)
T 2hdo_A           82 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFI  161 (209)
T ss_dssp             CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred             CCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEE
Confidence            567999999999998669999999999999999999998888899888888766555  335667778899999999999


Q ss_pred             ECCcccccCCCCCeeeeC
Q 023259          230 DNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I~  247 (285)
                      +|+..-.......|+.+-
T Consensus       162 GD~~~Di~~a~~aG~~~~  179 (209)
T 2hdo_A          162 GDSVSDEQTAQAANVDFG  179 (209)
T ss_dssp             ESSHHHHHHHHHHTCEEE
T ss_pred             CCChhhHHHHHHcCCeEE
Confidence            999877765555565443

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=97.75  E-value=5.4e-06  Score=70.33  Aligned_cols=93  Identities=15%  Similarity=0.124  Sum_probs=78.1

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCC--ccccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~--~~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +...||+.++|+.|++.+.++|.|++....++.+++.++...+|+.++..+  ...|+  ..+.+-++++|.+++++++|
T Consensus        83 ~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~--~~~Kp~p~~~~~~~~~lg~~p~~~~~v  160 (210)
T 2ah5_A           83 AQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS--PEAPHKADVIHQALQTHQLAPEQAIII  160 (210)
T ss_dssp             CEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--SSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred             CCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC--CCCCCChHHHHHHHHHcCCCcccEEEE
Confidence            457899999999998889999999999999999999999888998888766  22232  36778889999999999999


Q ss_pred             ECCcccccCCCCCeeee
Q 023259          230 DNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I  246 (285)
                      +|+..-.......|+.+
T Consensus       161 gDs~~Di~~a~~aG~~~  177 (210)
T 2ah5_A          161 GDTKFDMLGARETGIQK  177 (210)
T ss_dssp             ESSHHHHHHHHHHTCEE
T ss_pred             CCCHHHHHHHHHCCCcE
Confidence            99998777666777753

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=97.74  E-value=1.5e-05  Score=68.46  Aligned_cols=94  Identities=18%  Similarity=0.179  Sum_probs=77.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|.|++...+++.+++.++...+|..+++.+.+...|..  .+.+-++.+|.++++++.
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~  172 (241)
T 2hoq_A           93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALM  172 (241)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            45789999999999987 999999999999999999999988889998888776554442  456777888999999999


Q ss_pred             EECCc-ccccCCCCCeee
Q 023259          229 VDNNP-FSFLLQPLNGIP  245 (285)
Q Consensus       229 VDDs~-~~~~~~p~NgI~  245 (285)
                      |+|+. .-.......|+.
T Consensus       173 iGD~~~~Di~~a~~aG~~  190 (241)
T 2hoq_A          173 VGDRLYSDIYGAKRVGMK  190 (241)
T ss_dssp             EESCTTTTHHHHHHTTCE
T ss_pred             ECCCchHhHHHHHHCCCE
Confidence            99998 555544455553

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=97.73  E-value=1.5e-06  Score=75.51  Aligned_cols=90  Identities=7%  Similarity=0.010  Sum_probs=60.3

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecC---cccccC--CccccccccccCCCCCcEE
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRP---STTSTE--YREHVKDLSCLSKDLCRTL  227 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~---~c~~~k--~~~~~KdL~~Lgrdl~~vV  227 (285)
                      ..||+.++|+.|++. +.++|.|++....++.+++.|.  .+|..+....   .+...|  ...+.+-++.+|.    ++
T Consensus        89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~--~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~l  162 (211)
T 2b82_A           89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLA--DNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----RI  162 (211)
T ss_dssp             ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHH--HHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----EE
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHH--HhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----EE
Confidence            478999999999987 9999999998887777777643  2333221110   111112  2345566666665    99


Q ss_pred             EEECCcccccCCCCCeeeeCcc
Q 023259          228 IVDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       228 IVDDs~~~~~~~p~NgI~I~~F  249 (285)
                      +|+|+..........|+.+--+
T Consensus       163 ~VGDs~~Di~aA~~aG~~~i~v  184 (211)
T 2b82_A          163 FYGDSDNDITAARDVGARGIRI  184 (211)
T ss_dssp             EEESSHHHHHHHHHTTCEEEEC
T ss_pred             EEECCHHHHHHHHHCCCeEEEE
Confidence            9999998777666777654433

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=97.73  E-value=1.7e-05  Score=67.06  Aligned_cols=94  Identities=16%  Similarity=0.012  Sum_probs=78.4

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      ....||+.++|+.+++.+.++|.|++...+++.+++.++...+|..++..+.+...+..  .+.+-++.+|.++++++.|
T Consensus        99 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~v  178 (234)
T 3u26_A           99 GELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYV  178 (234)
T ss_dssp             CCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEEEE
Confidence            45789999999999977999999999999999999999988889998888766555443  4677788899999999999


Q ss_pred             ECCc-ccccCCCCCeee
Q 023259          230 DNNP-FSFLLQPLNGIP  245 (285)
Q Consensus       230 DDs~-~~~~~~p~NgI~  245 (285)
                      +|+. .-.......|+.
T Consensus       179 GD~~~~Di~~a~~aG~~  195 (234)
T 3u26_A          179 GDNPVKDCGGSKNLGMT  195 (234)
T ss_dssp             ESCTTTTHHHHHTTTCE
T ss_pred             cCCcHHHHHHHHHcCCE
Confidence            9998 656556666743

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=97.71  E-value=1.1e-05  Score=74.12  Aligned_cols=96  Identities=16%  Similarity=0.156  Sum_probs=74.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcc----------cc--cCCccccccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPST----------TS--TEYREHVKDLSC  218 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c----------~~--~k~~~~~KdL~~  218 (285)
                      +..+||+.++|+.|++. +.++|.|++...+++.+++.++...+|...+...+.          ..  .+...+.+-++.
T Consensus       177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~~  256 (335)
T 3n28_A          177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQ  256 (335)
T ss_dssp             CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHHH
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHHH
Confidence            46799999999999988 999999999999999999999988777665432211          11  111245566677


Q ss_pred             cCCCCCcEEEEECCcccccCCCCCeeeeC
Q 023259          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       219 Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      +|.++++++.|.|+..-.......|+.|-
T Consensus       257 lgi~~~~~v~vGDs~nDi~~a~~aG~~va  285 (335)
T 3n28_A          257 YDVEIHNTVAVGDGANDLVMMAAAGLGVA  285 (335)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             cCCChhhEEEEeCCHHHHHHHHHCCCeEE
Confidence            89999999999999987766666676654

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=97.70  E-value=2.4e-05  Score=66.06  Aligned_cols=99  Identities=13%  Similarity=0.096  Sum_probs=81.4

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +...||+.++|+.+++.+.++|.|++....++.+++.++...+|+.+++.+.+...+..  .+.+-++.+|.+++++|.|
T Consensus       106 ~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~i  185 (240)
T 3qnm_A          106 SGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMI  185 (240)
T ss_dssp             CCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred             CCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence            45789999999999956999999999999999999999988899999888876554433  5667788899999999999


Q ss_pred             ECCc-ccccCCCCCeeeeCccC
Q 023259          230 DNNP-FSFLLQPLNGIPCIPFS  250 (285)
Q Consensus       230 DDs~-~~~~~~p~NgI~I~~F~  250 (285)
                      +|++ .-.......|+.+--..
T Consensus       186 GD~~~~Di~~a~~aG~~~~~~~  207 (240)
T 3qnm_A          186 GDSWEADITGAHGVGMHQAFYN  207 (240)
T ss_dssp             ESCTTTTHHHHHHTTCEEEEEC
T ss_pred             CCCchHhHHHHHHcCCeEEEEc
Confidence            9996 76665556666555443

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=97.70  E-value=1.6e-05  Score=68.61  Aligned_cols=93  Identities=12%  Similarity=0.113  Sum_probs=78.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|.|++....++.+++.++.. +|..+++.+.+...|+.  .+.+-++.+|.+++++|+
T Consensus       109 ~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~  187 (240)
T 2hi0_A          109 TGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVY  187 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence            46789999999999977 999999999999999999999887 89988888775544433  567788889999999999


Q ss_pred             EECCcccccCCCCCeee
Q 023259          229 VDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~  245 (285)
                      |.|+..-.......|+.
T Consensus       188 vGDs~~Di~~a~~aG~~  204 (240)
T 2hi0_A          188 IGDSEIDIQTARNSEMD  204 (240)
T ss_dssp             EESSHHHHHHHHHTTCE
T ss_pred             EcCCHHHHHHHHHCCCe
Confidence            99999877666666775

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=97.67  E-value=1.4e-05  Score=71.07  Aligned_cols=93  Identities=6%  Similarity=-0.040  Sum_probs=77.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhc---CCCceeEEEecCcccccCCc--cccccccccCCCCCc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID---GENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCR  225 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LD---p~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~  225 (285)
                      +...||+.++|+.|++. +.++|.|++....++.+++.++   ...+|+.++.. ++. .|..  .|.+-++.+|.++++
T Consensus       129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~p~~  206 (261)
T 1yns_A          129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-HKVESESYRKIADSIGCSTNN  206 (261)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHHHHTSCGGG
T ss_pred             cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHHHhCcCccc
Confidence            56789999999999876 9999999999999999998654   66789888877 666 5543  678888999999999


Q ss_pred             EEEEECCcccccCCCCCeeee
Q 023259          226 TLIVDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       226 vVIVDDs~~~~~~~p~NgI~I  246 (285)
                      +|+|+|+..-.......|+.+
T Consensus       207 ~l~VgDs~~di~aA~~aG~~~  227 (261)
T 1yns_A          207 ILFLTDVTREASAAEEADVHV  227 (261)
T ss_dssp             EEEEESCHHHHHHHHHTTCEE
T ss_pred             EEEEcCCHHHHHHHHHCCCEE
Confidence            999999988776666667643

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=97.63  E-value=5.9e-05  Score=64.13  Aligned_cols=95  Identities=14%  Similarity=0.074  Sum_probs=70.8

Q ss_pred             EEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEE
Q 023259          151 TVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTL  227 (285)
Q Consensus       151 ~V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vV  227 (285)
                      .+...||+.++|+.|++. +.++|.|++.. .++.+++.++...+|+.+++.+.+...|..  .+.+-++.+|.++   +
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~---~  168 (220)
T 2zg6_A           93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA---V  168 (220)
T ss_dssp             EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-----------CCHHHHHHHHHCSSE---E
T ss_pred             CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---E
Confidence            467899999999999987 99999999977 589999999988899999888876544432  5667777888776   9


Q ss_pred             EEECCcc-cccCCCCCeeeeCcc
Q 023259          228 IVDNNPF-SFLLQPLNGIPCIPF  249 (285)
Q Consensus       228 IVDDs~~-~~~~~p~NgI~I~~F  249 (285)
                      +|+|++. ........|+.+--+
T Consensus       169 ~vgD~~~~Di~~a~~aG~~~i~v  191 (220)
T 2zg6_A          169 HVGDIYELDYIGAKRSYVDPILL  191 (220)
T ss_dssp             EEESSCCCCCCCSSSCSEEEEEB
T ss_pred             EEcCCchHhHHHHHHCCCeEEEE
Confidence            9999998 787777788765443

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=97.61  E-value=2.6e-05  Score=65.65  Aligned_cols=94  Identities=12%  Similarity=0.060  Sum_probs=79.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCC--ccccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~--~~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.+++. +.++|.|++...+++.+++.++...+|+.+++.+.+...+.  ..+.+-++.+|.++++++.
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~  169 (233)
T 3s6j_A           90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLV  169 (233)
T ss_dssp             CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEE
Confidence            56799999999999988 99999999999999999999998888988888877654443  2567788889999999999


Q ss_pred             EECCcccccCCCCCeee
Q 023259          229 VDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~  245 (285)
                      |+|+..-.......|+.
T Consensus       170 iGD~~~Di~~a~~aG~~  186 (233)
T 3s6j_A          170 IGDAIWDMLAARRCKAT  186 (233)
T ss_dssp             EESSHHHHHHHHHTTCE
T ss_pred             EeCCHHhHHHHHHCCCE
Confidence            99999877766666663

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=97.57  E-value=5.2e-05  Score=63.71  Aligned_cols=96  Identities=15%  Similarity=0.119  Sum_probs=76.9

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCc---hhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEE
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGL---EGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTL  227 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~---~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vV  227 (285)
                      ..|++.++|+.+++. +.++|.|++.   ..+++.+++.++...+|..+++.+.+...+..  .+.+-++.+|.++++++
T Consensus       100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  179 (235)
T 2om6_A          100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESL  179 (235)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGEE
T ss_pred             cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccceE
Confidence            489999999999987 9999999999   99999999999888889888887665444432  45667788999999999


Q ss_pred             EEECCc-ccccCCCCCeeeeCcc
Q 023259          228 IVDNNP-FSFLLQPLNGIPCIPF  249 (285)
Q Consensus       228 IVDDs~-~~~~~~p~NgI~I~~F  249 (285)
                      .|+|++ .-.......|+.+--+
T Consensus       180 ~iGD~~~nDi~~a~~aG~~~~~~  202 (235)
T 2om6_A          180 HIGDTYAEDYQGARKVGMWAVWI  202 (235)
T ss_dssp             EEESCTTTTHHHHHHTTSEEEEE
T ss_pred             EECCChHHHHHHHHHCCCEEEEE
Confidence            999999 6565555556554443

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=97.53  E-value=5.3e-05  Score=66.47  Aligned_cols=100  Identities=9%  Similarity=-0.013  Sum_probs=80.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|.|++.. .+..+++.++...+|..+++.+.+...|..  .+.+-++.+|.+++++|+
T Consensus       105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~  183 (263)
T 3k1z_A          105 WQVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAH  183 (263)
T ss_dssp             EEECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             ceECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence            56899999999999988 99999999876 478999999988899998888776554433  567778889999999999


Q ss_pred             EECCc-ccccCCCCCeeeeCccCCC
Q 023259          229 VDNNP-FSFLLQPLNGIPCIPFSAG  252 (285)
Q Consensus       229 VDDs~-~~~~~~p~NgI~I~~F~~g  252 (285)
                      |+|++ .-.......|+.+--+..+
T Consensus       184 vGD~~~~Di~~a~~aG~~~i~~~~~  208 (263)
T 3k1z_A          184 VGDNYLCDYQGPRAVGMHSFLVVGP  208 (263)
T ss_dssp             EESCHHHHTHHHHTTTCEEEEECCS
T ss_pred             ECCCcHHHHHHHHHCCCEEEEEcCC
Confidence            99997 6666666677766555433

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=97.53  E-value=4.9e-05  Score=63.63  Aligned_cols=96  Identities=10%  Similarity=0.116  Sum_probs=76.0

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCcee-EEEecCcccc-----cCCccccccccccCCCCCc
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFS-LRLYRPSTTS-----TEYREHVKDLSCLSKDLCR  225 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~-~~l~r~~c~~-----~k~~~~~KdL~~Lgrdl~~  225 (285)
                      +..+||+.++|+.|++.+.++|.|++...+++.+++.++...+|. ...+.++...     .+...+.+-++.++.+.++
T Consensus        68 ~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~~  147 (206)
T 1rku_A           68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR  147 (206)
T ss_dssp             CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCE
T ss_pred             cCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCCE
Confidence            457999999999999779999999999999999999999888884 5555444311     2333566677778888899


Q ss_pred             EEEEECCcccccCCCCCeeeeC
Q 023259          226 TLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       226 vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      ++.|+|+..-.......|+.+-
T Consensus       148 ~~~iGD~~~Di~~a~~aG~~~~  169 (206)
T 1rku_A          148 VIAAGDSYNDTTMLSEAHAGIL  169 (206)
T ss_dssp             EEEEECSSTTHHHHHHSSEEEE
T ss_pred             EEEEeCChhhHHHHHhcCccEE
Confidence            9999999987776677777654

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=97.51  E-value=2.1e-05  Score=65.32  Aligned_cols=98  Identities=7%  Similarity=0.001  Sum_probs=80.0

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      ....||+.++|+.+++...++|.|++...+++.+++.++...+|..++..+.+...|..  .+.+-++.+|.+++++++|
T Consensus        85 ~~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v  164 (200)
T 3cnh_A           85 SQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMV  164 (200)
T ss_dssp             CCBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeEEe
Confidence            34789999999999876699999999999999999999888888888887765544433  5666778889999999999


Q ss_pred             ECCcccccCCCCCeeeeCcc
Q 023259          230 DNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I~~F  249 (285)
                      +|++.........|+.+--+
T Consensus       165 gD~~~Di~~a~~aG~~~~~~  184 (200)
T 3cnh_A          165 DDRLQNVQAARAVGMHAVQC  184 (200)
T ss_dssp             ESCHHHHHHHHHTTCEEEEC
T ss_pred             CCCHHHHHHHHHCCCEEEEE
Confidence            99998877666677765444

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=97.35  E-value=5.8e-05  Score=63.90  Aligned_cols=94  Identities=12%  Similarity=0.088  Sum_probs=73.3

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCC--ccccccccccCCCCCcEEEEE
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLIVD  230 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~--~~~~KdL~~Lgrdl~~vVIVD  230 (285)
                      ..||+.++|+.|++. +.++|.|++..  ++.+++.++...+|..+++.+.+...+.  ..+.+-++.+|.+++++|.|+
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vG  170 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIE  170 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEEEE
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEEe
Confidence            689999999999988 99999999854  8899999998889998888777654442  256778888999999999999


Q ss_pred             CCcccccCCCCCeeeeCcc
Q 023259          231 NNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       231 Ds~~~~~~~p~NgI~I~~F  249 (285)
                      |+..-.......|+.+--.
T Consensus       171 Ds~~Di~~a~~aG~~~~~~  189 (233)
T 3nas_A          171 DAEAGISAIKSAGMFAVGV  189 (233)
T ss_dssp             CSHHHHHHHHHTTCEEEEC
T ss_pred             CCHHHHHHHHHcCCEEEEE
Confidence            9998777666677765544

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=97.34  E-value=0.00084  Score=55.31  Aligned_cols=76  Identities=20%  Similarity=0.142  Sum_probs=47.2

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEECCc
Q 023259          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNP  233 (285)
Q Consensus       155 RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~  233 (285)
                      -|++.+.|+.+.+. +.++|+|.-.......+++.++..+.-...++..+     . ...+-.....+.+.--++|||+.
T Consensus        26 ~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~n~-----P-~~~~~~~~~~rK~~~~~fIDDR~   99 (142)
T 2obb_A           26 IPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANKDY-----P-EEERDHQGFSRKLKADLFIDDRN   99 (142)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESSSS-----T-TC---CCSCCSSCCCSEEECTTS
T ss_pred             CHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEcCC-----c-hhhhcchhhcCCcCCCEEeeccc
Confidence            47899999999988 99999999887777777777766654222222111     1 11111122334456668899987


Q ss_pred             ccc
Q 023259          234 FSF  236 (285)
Q Consensus       234 ~~~  236 (285)
                      ...
T Consensus       100 ~~~  102 (142)
T 2obb_A          100 VGG  102 (142)
T ss_dssp             TTC
T ss_pred             cCC
Confidence            543

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=97.31  E-value=0.00011  Score=61.05  Aligned_cols=97  Identities=12%  Similarity=0.022  Sum_probs=78.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCC--ccccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~--~~~~KdL~~Lgrdl~~vVI  228 (285)
                      ....|++.++|+.+++. +.++|.|++...+++.+++.++...+|..+++.+.+...+.  ..+.+-++.+|.++++++.
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~  172 (226)
T 1te2_A           93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVA  172 (226)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred             CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence            45789999999999987 99999999999999999999988888888888776544442  2455667788999999999


Q ss_pred             EECCcccccCCCCCeeeeCc
Q 023259          229 VDNNPFSFLLQPLNGIPCIP  248 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~~  248 (285)
                      |.|+..-.......|+.+--
T Consensus       173 iGD~~nDi~~a~~aG~~~~~  192 (226)
T 1te2_A          173 LEDSVNGMIASKAARMRSIV  192 (226)
T ss_dssp             EESSHHHHHHHHHTTCEEEE
T ss_pred             EeCCHHHHHHHHHcCCEEEE
Confidence            99999877665556655444

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=97.28  E-value=0.00044  Score=62.06  Aligned_cols=82  Identities=16%  Similarity=0.136  Sum_probs=51.1

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCch---hhHHHHHHHhcCC--CceeEEEecCcccccCCccccccccccCCCCCcE
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGLE---GYARPLVDRIDGE--NLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRT  226 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~~---~YA~~Vl~~LDp~--~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~v  226 (285)
                      ...||+.++|+.|.+. +.++|.|+...   ..+...++.++..  .++..++..+. . .+... .+.+...+  .+.+
T Consensus       101 ~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~-~-~K~~~-~~~~~~~~--~~~~  175 (258)
T 2i33_A          101 EALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPK-E-KGKEK-RRELVSQT--HDIV  175 (258)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTT-C-CSSHH-HHHHHHHH--EEEE
T ss_pred             CcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCC-C-CCcHH-HHHHHHhC--CCce
Confidence            4679999999999988 99999999884   4455566666665  44444444332 1 11111 11111122  2348


Q ss_pred             EEEECCcccccCC
Q 023259          227 LIVDNNPFSFLLQ  239 (285)
Q Consensus       227 VIVDDs~~~~~~~  239 (285)
                      ++|.|+..-+...
T Consensus       176 l~VGDs~~Di~aA  188 (258)
T 2i33_A          176 LFFGDNLSDFTGF  188 (258)
T ss_dssp             EEEESSGGGSTTC
T ss_pred             EEeCCCHHHhccc
Confidence            8999999877655

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=97.21  E-value=5.6e-05  Score=71.95  Aligned_cols=96  Identities=11%  Similarity=-0.012  Sum_probs=76.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCcee--EEEecCccc-----------ccCC--cccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFS--LRLYRPSTT-----------STEY--REHVKD  215 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~--~~l~r~~c~-----------~~k~--~~~~Kd  215 (285)
                      +...||+.++|+.|++. +.++|.|++...+++.+++.++...+|.  .+++.++..           ..|.  ..|.+-
T Consensus       214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~a  293 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA  293 (384)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred             CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHHH
Confidence            45789999999999988 9999999999999999999999888898  677765532           1222  356667


Q ss_pred             ccccC--------------CCCCcEEEEECCcccccCCCCCeeeeC
Q 023259          216 LSCLS--------------KDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       216 L~~Lg--------------rdl~~vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      ++.+|              .+++++|+|+|++.-.......|+.+-
T Consensus       294 ~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I  339 (384)
T 1qyi_A          294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFI  339 (384)
T ss_dssp             HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEE
T ss_pred             HHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEE
Confidence            77777              789999999999987766666666543

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=97.21  E-value=2.1e-05  Score=67.97  Aligned_cols=90  Identities=9%  Similarity=-0.059  Sum_probs=56.2

Q ss_pred             eCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCcee---EEEecCcccccCC--ccccccccccCCCCCcEEE
Q 023259          154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFS---LRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~---~~l~r~~c~~~k~--~~~~KdL~~Lgrdl~~vVI  228 (285)
                      ..|++.++|+.+.+.+.+ |.|+....++...+..++...+|.   .....+.....|+  ..+.+-++.+|.++++++.
T Consensus       123 ~~~~~~~~l~~l~~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~  201 (259)
T 2ho4_A          123 HYQLLNQAFRLLLDGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVM  201 (259)
T ss_dssp             BHHHHHHHHHHHHTTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEEE
T ss_pred             CHHHHHHHHHHHHCCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEEE
Confidence            457888888888855777 888887766554444333333332   2222332222222  2466777889999999999


Q ss_pred             EECCc-ccccCCCCCee
Q 023259          229 VDNNP-FSFLLQPLNGI  244 (285)
Q Consensus       229 VDDs~-~~~~~~p~NgI  244 (285)
                      |.|++ .-.......|+
T Consensus       202 iGD~~~~Di~~a~~aG~  218 (259)
T 2ho4_A          202 IGDDCRDDVDGAQNIGM  218 (259)
T ss_dssp             EESCTTTTHHHHHHTTC
T ss_pred             ECCCcHHHHHHHHHCCC
Confidence            99998 66554444444

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=97.17  E-value=0.00054  Score=55.75  Aligned_cols=93  Identities=17%  Similarity=0.142  Sum_probs=74.6

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCC--ccccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~--~~~~KdL~~Lgrdl~~vVI  228 (285)
                      ...+|++.++|+.+++. +.++|.|++...+++ +++.++...+|..++..+.....+.  ..+.+-++.+|.++++++.
T Consensus        84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~  162 (207)
T 2go7_A           84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYY  162 (207)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEE
Confidence            46799999999999987 999999999999999 9999988888888887766544332  2455666778999999999


Q ss_pred             EECCcccccCCCCCeee
Q 023259          229 VDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~  245 (285)
                      |+|+..-.......|+.
T Consensus       163 iGD~~nDi~~~~~aG~~  179 (207)
T 2go7_A          163 IGDRTLDVEFAQNSGIQ  179 (207)
T ss_dssp             EESSHHHHHHHHHHTCE
T ss_pred             ECCCHHHHHHHHHCCCe
Confidence            99998776655555554

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=97.15  E-value=0.00015  Score=60.99  Aligned_cols=90  Identities=18%  Similarity=0.170  Sum_probs=70.6

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +...||+.++|+.+++.+.++|.|++...     ++.++...+|..++..+.+...|..  .+.+-++.+|.++++++.|
T Consensus       104 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~v  178 (230)
T 3vay_A          104 VQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHV  178 (230)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEEE
Confidence            45789999999999988999999999876     5666767789988887766544432  5677788899999999999


Q ss_pred             ECCc-ccccCCCCCeeee
Q 023259          230 DNNP-FSFLLQPLNGIPC  246 (285)
Q Consensus       230 DDs~-~~~~~~p~NgI~I  246 (285)
                      +|+. .-.......|+.+
T Consensus       179 GD~~~~Di~~a~~aG~~~  196 (230)
T 3vay_A          179 GDHPSDDIAGAQQAGMRA  196 (230)
T ss_dssp             ESCTTTTHHHHHHTTCEE
T ss_pred             eCChHHHHHHHHHCCCEE
Confidence            9998 6665555555543

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.09  E-value=0.00019  Score=59.80  Aligned_cols=93  Identities=22%  Similarity=0.096  Sum_probs=74.0

Q ss_pred             EeeCccHHHHHHHhhh--cceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSE--FADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~--~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +...||+.++|+.+.+  .+.++|.|++....++.+++.++..++|..++....   .+...+.+-++.+|.++++++.|
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~k---pk~~~~~~~~~~lgi~~~~~i~i  180 (234)
T 3ddh_A          104 IELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVMSD---KTEKEYLRLLSILQIAPSELLMV  180 (234)
T ss_dssp             CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEESC---CSHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeecCC---CCHHHHHHHHHHhCCCcceEEEE
Confidence            4678999999999998  699999999999999999999998888888776432   22235677788899999999999


Q ss_pred             ECCc-ccccCCCCCeeeeC
Q 023259          230 DNNP-FSFLLQPLNGIPCI  247 (285)
Q Consensus       230 DDs~-~~~~~~p~NgI~I~  247 (285)
                      +|+. .-.......|+.+-
T Consensus       181 GD~~~~Di~~a~~aG~~~v  199 (234)
T 3ddh_A          181 GNSFKSDIQPVLSLGGYGV  199 (234)
T ss_dssp             ESCCCCCCHHHHHHTCEEE
T ss_pred             CCCcHHHhHHHHHCCCeEE
Confidence            9997 66655444554433

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=97.07  E-value=0.00017  Score=60.51  Aligned_cols=94  Identities=11%  Similarity=-0.008  Sum_probs=72.9

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--ccccc---ccccCCCCCcE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKD---LSCLSKDLCRT  226 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~Kd---L~~Lgrdl~~v  226 (285)
                      +...||+.++|+.+++.+.++|.|++....++.+++.++  .+|..++..+++...|..  .|.+-   ++.+|.+++++
T Consensus        98 ~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~l~--~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~~  175 (240)
T 3smv_A           98 WPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAKLG--VEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDI  175 (240)
T ss_dssp             CCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTTTC--SCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGGGE
T ss_pred             CCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHhcC--CccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCchhE
Confidence            457899999999999889999999999999999988854  578888887766554433  23333   78899999999


Q ss_pred             EEEECCc-ccccCCCCCeeeeC
Q 023259          227 LIVDNNP-FSFLLQPLNGIPCI  247 (285)
Q Consensus       227 VIVDDs~-~~~~~~p~NgI~I~  247 (285)
                      |.|+|+. .-.......|+.+-
T Consensus       176 ~~vGD~~~~Di~~a~~aG~~~~  197 (240)
T 3smv_A          176 LHTAESLYHDHIPANDAGLVSA  197 (240)
T ss_dssp             EEEESCTTTTHHHHHHHTCEEE
T ss_pred             EEECCCchhhhHHHHHcCCeEE
Confidence            9999996 66655555555443

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=97.07  E-value=9.9e-05  Score=62.69  Aligned_cols=94  Identities=5%  Similarity=-0.031  Sum_probs=74.1

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +...||+.++|+.+++.+.++|.|++....++.+++.++..  |..+++.+.+...+..  .+.+-++.+|.++++++.|
T Consensus       115 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~i  192 (254)
T 3umg_A          115 LTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVMLA  192 (254)
T ss_dssp             CCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred             CcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEEE
Confidence            45689999999999988999999999999999999999765  6666666654443332  5667788899999999999


Q ss_pred             ECCcccccCCCCCeeeeC
Q 023259          230 DNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I~  247 (285)
                      +|+..-.......|+.+-
T Consensus       193 GD~~~Di~~a~~aG~~~~  210 (254)
T 3umg_A          193 AAHNGDLEAAHATGLATA  210 (254)
T ss_dssp             ESCHHHHHHHHHTTCEEE
T ss_pred             eCChHhHHHHHHCCCEEE
Confidence            999877665555555443

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=97.07  E-value=0.00033  Score=58.87  Aligned_cols=116  Identities=9%  Similarity=0.024  Sum_probs=74.3

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-c
Q 023259           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-A  169 (285)
Q Consensus        91 ~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-y  169 (285)
                      ..+-+.||+|+||||++....  +                         ..+|..   -..+..|.+.  .|+.|++. +
T Consensus         6 ~~~ikliv~D~DGtL~d~~~~--~-------------------------~~~g~~---~~~f~~~D~~--~L~~Lk~~Gi   53 (168)
T 3ewi_A            6 LKEIKLLVCNIDGCLTNGHIY--V-------------------------SGDQKE---IISYDVKDAI--GISLLKKSGI   53 (168)
T ss_dssp             -CCCCEEEEECCCCCSCSCCB--C-------------------------CSSCCC---EEEEEHHHHH--HHHHHHHTTC
T ss_pred             HhcCcEEEEeCccceECCcEE--E-------------------------cCCCCE---EEEEecCcHH--HHHHHHHCCC
Confidence            346789999999999974210  0                         001111   0113445553  68999887 9


Q ss_pred             eEEEEccCchhhHHHHHH--HhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccCCCCCeeeeC
Q 023259          170 DLILFTAGLEGYARPLVD--RIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       170 eIvI~Ta~~~~YA~~Vl~--~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      .++|-|+.  ..++.+++  .++.. +|     ..  ...+...+.+-++.+|.++++++.|-|+..-.......|+.+-
T Consensus        54 ~~~I~Tg~--~~~~~~l~~l~lgi~-~~-----~g--~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a  123 (168)
T 3ewi_A           54 EVRLISER--ACSKQTLSALKLDCK-TE-----VS--VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAV  123 (168)
T ss_dssp             EEEEECSS--CCCHHHHHTTCCCCC-EE-----CS--CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEE
T ss_pred             EEEEEeCc--HHHHHHHHHhCCCcE-EE-----EC--CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEE
Confidence            99999998  78889998  44433 22     11  1122223445566789999999999999987766555666554


Q ss_pred             c
Q 023259          248 P  248 (285)
Q Consensus       248 ~  248 (285)
                      .
T Consensus       124 ~  124 (168)
T 3ewi_A          124 P  124 (168)
T ss_dssp             C
T ss_pred             e
Confidence            3

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=97.05  E-value=0.00082  Score=60.77  Aligned_cols=82  Identities=15%  Similarity=0.132  Sum_probs=53.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchh----hHHHHHHHhcCCCcee-EEEecCcccccCCccccccccccCCCCCc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEG----YARPLVDRIDGENLFS-LRLYRPSTTSTEYREHVKDLSCLSKDLCR  225 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~----YA~~Vl~~LDp~~~f~-~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~  225 (285)
                      ....||+.+||+.|.+. ++|+|-|+....    .+...++.++...++. .++.+... ..| ..-.+.|...|  .+-
T Consensus       100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~-~~K-~~~r~~L~~~g--y~i  175 (260)
T 3pct_A          100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDK-SNK-SVRFKQVEDMG--YDI  175 (260)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSC-SSS-HHHHHHHHTTT--CEE
T ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCC-CCh-HHHHHHHHhcC--CCE
Confidence            46789999999999988 999999988664    6666666666654442 45555432 112 12233333333  344


Q ss_pred             EEEEECCccccc
Q 023259          226 TLIVDNNPFSFL  237 (285)
Q Consensus       226 vVIVDDs~~~~~  237 (285)
                      ++.|-|+..-+.
T Consensus       176 v~~iGD~~~Dl~  187 (260)
T 3pct_A          176 VLFVGDNLNDFG  187 (260)
T ss_dssp             EEEEESSGGGGC
T ss_pred             EEEECCChHHcC
Confidence            889999887665

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=97.04  E-value=0.0002  Score=59.63  Aligned_cols=95  Identities=13%  Similarity=0.115  Sum_probs=74.9

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      ...||+.++|+.+++. +.++|.|++  ..++.+++.++...+|...++.+.+...+..  .+.+-++.+|.++++++.|
T Consensus        91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~i  168 (221)
T 2wf7_A           91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGL  168 (221)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred             CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeEEE
Confidence            4679999999999987 999999998  6788889988887888888887766544433  5666778899999999999


Q ss_pred             ECCcccccCCCCCeeeeCcc
Q 023259          230 DNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I~~F  249 (285)
                      +|+..-.......|+.+--.
T Consensus       169 GD~~nDi~~a~~aG~~~~~~  188 (221)
T 2wf7_A          169 EDSQAGIQAIKDSGALPIGV  188 (221)
T ss_dssp             ESSHHHHHHHHHHTCEEEEE
T ss_pred             eCCHHHHHHHHHCCCEEEEE
Confidence            99987766555556554433

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=97.04  E-value=0.00046  Score=56.34  Aligned_cols=93  Identities=11%  Similarity=0.116  Sum_probs=72.7

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCC--ccccccccccCCCCCcEEEEE
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLIVD  230 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~--~~~~KdL~~Lgrdl~~vVIVD  230 (285)
                      ..||+.++|+.+++. +.++|.|++. .+++.+++.++...+|..++..+.+...+.  ..+.+-++.+|.+  +++.|+
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~iG  159 (190)
T 2fi1_A           83 LFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLVIG  159 (190)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEEEE
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEEEc
Confidence            789999999999987 9999999876 578899999888888988888776544332  2455666778877  999999


Q ss_pred             CCcccccCCCCCeeeeCcc
Q 023259          231 NNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       231 Ds~~~~~~~p~NgI~I~~F  249 (285)
                      |+..-.......|+.+--+
T Consensus       160 D~~~Di~~a~~aG~~~~~~  178 (190)
T 2fi1_A          160 DRPIDIEAGQAAGLDTHLF  178 (190)
T ss_dssp             SSHHHHHHHHHTTCEEEEC
T ss_pred             CCHHHHHHHHHcCCeEEEE
Confidence            9987776666666654433

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=97.03  E-value=0.00036  Score=60.14  Aligned_cols=130  Identities=14%  Similarity=0.163  Sum_probs=84.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccc--------cCCc-c-cc-------
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS--------TEYR-E-HV-------  213 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~--------~k~~-~-~~-------  213 (285)
                      +..+||+.++|+.|++. +.++|.|++...+++.+++  +..++ ..++..+....        .+.. . ..       
T Consensus        76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K  152 (236)
T 2fea_A           76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK  152 (236)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred             CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCCcH
Confidence            56899999999999977 9999999999999999998  33233 44444433221        1221 1 22       


Q ss_pred             -ccccccCCCCCcEEEEECCcccccCCCCCeeeeCccCCCC----C--CCCc----cCcHHHHHhhcCChHHHHhcCCCC
Q 023259          214 -KDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQ----P--HDNQ----KDVRPELYERFHMPEWFQKQGIPT  282 (285)
Q Consensus       214 -KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~~F~~g~----~--~D~~----~DVR~vL~~~f~~~e~~~~~~~~~  282 (285)
                       +-++.++.+++++++|+|+..-.......|+.+-.+...+    .  .|-.    .|+..+|.+...+.+|+...-.+.
T Consensus       153 ~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~~~~~~~~~~  232 (236)
T 2fea_A          153 PSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQNKNAGE  232 (236)
T ss_dssp             HHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHHHHHHHTCC----
T ss_pred             HHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeecCCHHHHHHHHHHhHHHHHhhhCccccc
Confidence             5677788999999999999988877777788765431000    0  1111    566666776666777876655554


Q ss_pred             CC
Q 023259          283 SG  284 (285)
Q Consensus       283 ~~  284 (285)
                      ++
T Consensus       233 ~~  234 (236)
T 2fea_A          233 SS  234 (236)
T ss_dssp             --
T ss_pred             cc
Confidence            43

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=96.95  E-value=0.00031  Score=60.50  Aligned_cols=93  Identities=16%  Similarity=0.036  Sum_probs=72.7

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEEC
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDD  231 (285)
                      +...||+.++|+.++..+.++|.|++...+++.+++.++...+|..++....   .+...+.+-++.+|.++++++.|.|
T Consensus       111 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~k---p~~~~~~~~~~~l~~~~~~~i~iGD  187 (251)
T 2pke_A          111 VEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVVSE---KDPQTYARVLSEFDLPAERFVMIGN  187 (251)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEESC---CSHHHHHHHHHHHTCCGGGEEEEES
T ss_pred             CCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeeeCC---CCHHHHHHHHHHhCcCchhEEEECC
Confidence            4578999999999995599999999999999999999988888877765321   1223566677888999999999999


Q ss_pred             Cc-ccccCCCCCeeeeC
Q 023259          232 NP-FSFLLQPLNGIPCI  247 (285)
Q Consensus       232 s~-~~~~~~p~NgI~I~  247 (285)
                      +. .-.......|+.+-
T Consensus       188 ~~~~Di~~a~~aG~~~~  204 (251)
T 2pke_A          188 SLRSDVEPVLAIGGWGI  204 (251)
T ss_dssp             CCCCCCHHHHHTTCEEE
T ss_pred             CchhhHHHHHHCCCEEE
Confidence            99 76655555555443

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=96.91  E-value=0.001  Score=59.59  Aligned_cols=85  Identities=7%  Similarity=0.001  Sum_probs=67.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVD  230 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVD  230 (285)
                      ...+||+.++|+.|++. +.++|.|++....++.+++.++...+|..++-         ....+-++.++.+ +++++|.
T Consensus       162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~---------~~K~~~~~~l~~~-~~~~~vG  231 (287)
T 3a1c_A          162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLP---------HQKSEEVKKLQAK-EVVAFVG  231 (287)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCT---------TCHHHHHHHHTTT-CCEEEEE
T ss_pred             cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecCh---------HHHHHHHHHHhcC-CeEEEEE
Confidence            35799999999999987 99999999999999999999987766654321         1224556677878 9999999


Q ss_pred             CCcccccCCCCCeeee
Q 023259          231 NNPFSFLLQPLNGIPC  246 (285)
Q Consensus       231 Ds~~~~~~~p~NgI~I  246 (285)
                      |+..-.......|+.|
T Consensus       232 Ds~~Di~~a~~ag~~v  247 (287)
T 3a1c_A          232 DGINDAPALAQADLGI  247 (287)
T ss_dssp             CTTTCHHHHHHSSEEE
T ss_pred             CCHHHHHHHHHCCeeE
Confidence            9997776655566653

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=96.90  E-value=0.0013  Score=59.56  Aligned_cols=83  Identities=13%  Similarity=0.067  Sum_probs=54.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchh----hHHHHHHHhcCCCcee-EEEecCcccccCCccccccccccCCCCCc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEG----YARPLVDRIDGENLFS-LRLYRPSTTSTEYREHVKDLSCLSKDLCR  225 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~----YA~~Vl~~LDp~~~f~-~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~  225 (285)
                      ....||+.+||+.|.+. ++|+|-|+....    .+..-++.++...+.. .++.++.+ ..| ..-.+.|...|.  .-
T Consensus       100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~-~~K-~~~r~~l~~~Gy--~i  175 (262)
T 3ocu_A          100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDK-SAK-AARFAEIEKQGY--EI  175 (262)
T ss_dssp             CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSC-SCC-HHHHHHHHHTTE--EE
T ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCC-CCh-HHHHHHHHhcCC--CE
Confidence            56789999999999988 999999988664    5556666666554332 45555442 122 122333333333  34


Q ss_pred             EEEEECCcccccC
Q 023259          226 TLIVDNNPFSFLL  238 (285)
Q Consensus       226 vVIVDDs~~~~~~  238 (285)
                      ++.|-|+..-+..
T Consensus       176 v~~vGD~~~Dl~~  188 (262)
T 3ocu_A          176 VLYVGDNLDDFGN  188 (262)
T ss_dssp             EEEEESSGGGGCS
T ss_pred             EEEECCChHHhcc
Confidence            8999999877754

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=96.73  E-value=0.00042  Score=61.59  Aligned_cols=94  Identities=10%  Similarity=-0.100  Sum_probs=57.1

Q ss_pred             eCccHHHHHHHhhhc--ceEEEEccC---------------------chhhHHHHHHHhcCCCceeEE----------Ee
Q 023259          154 ERPGLREFLKQLSEF--ADLILFTAG---------------------LEGYARPLVDRIDGENLFSLR----------LY  200 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~--yeIvI~Ta~---------------------~~~YA~~Vl~~LDp~~~f~~~----------l~  200 (285)
                      .+|++.++|+.+.+.  +.+.+.|+.                     ....+..+++..+...+|...          .+
T Consensus       123 ~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~  202 (289)
T 3gyg_A          123 SKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYD  202 (289)
T ss_dssp             CHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEE
T ss_pred             CHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCceE
Confidence            468999999999876  445677766                     334445555554443333221          11


Q ss_pred             cCccccc--CCccccccccccCCCCCcEEEEECCcccccCCCCCeeeeC
Q 023259          201 RPSTTST--EYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       201 r~~c~~~--k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      .+-....  +.....+-++.+|.++++++.|-|+..-.......|+.|-
T Consensus       203 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~  251 (289)
T 3gyg_A          203 VDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYL  251 (289)
T ss_dssp             EEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEE
Confidence            1111111  1112345556678899999999999998877776776653

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=96.69  E-value=0.0015  Score=58.49  Aligned_cols=94  Identities=11%  Similarity=0.046  Sum_probs=67.3

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhH---HHHHHH--------hcCCCceeEEEecCcccccCCc--ccccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYA---RPLVDR--------IDGENLFSLRLYRPSTTSTEYR--EHVKDLS  217 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA---~~Vl~~--------LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~  217 (285)
                      ....||+.++|+.|++. +.++|-|+....++   ..+++.        ++.  .|...+.+++. ..+..  .+.+-++
T Consensus       187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~-~~kp~p~~~~~~~~  263 (301)
T 1ltq_A          187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQG-DTRKDDVVKEEIFW  263 (301)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTT-CCSCHHHHHHHHHH
T ss_pred             cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCC-CCcHHHHHHHHHHH
Confidence            34689999999999987 99999999998776   456666        555  47777776653 22222  3344456


Q ss_pred             ccCCCCCc-EEEEECCcccccCCCCCeeeeCc
Q 023259          218 CLSKDLCR-TLIVDNNPFSFLLQPLNGIPCIP  248 (285)
Q Consensus       218 ~Lgrdl~~-vVIVDDs~~~~~~~p~NgI~I~~  248 (285)
                      .++.+..+ +++|+|+.........+|+.+--
T Consensus       264 ~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~  295 (301)
T 1ltq_A          264 KHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQ  295 (301)
T ss_dssp             HHTTTTCEEEEEEECCHHHHHHHHHTTCCEEE
T ss_pred             HHhccccceEEEeCCcHHHHHHHHHcCCeEEE
Confidence            66655544 68899999988888888886543

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=96.66  E-value=0.0011  Score=56.22  Aligned_cols=94  Identities=10%  Similarity=-0.039  Sum_probs=66.6

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcc-cccC---Cc--------ccccccccc
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPST-TSTE---YR--------EHVKDLSCL  219 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c-~~~k---~~--------~~~KdL~~L  219 (285)
                      .++||+.++|+.|++. +.++|.|++...+++.+++.++...+|...+...+. ...+   ..        ...+-++.+
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~  171 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGM  171 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHHT
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHHc
Confidence            3599999999999987 999999999999999999999887666544332111 0000   00        112334456


Q ss_pred             C---CCCCcEEEEECCcccccCCCCCeeee
Q 023259          220 S---KDLCRTLIVDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       220 g---rdl~~vVIVDDs~~~~~~~p~NgI~I  246 (285)
                      |   .+++++++|.|+..-.......|+.+
T Consensus       172 ~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~  201 (232)
T 3fvv_A          172 GLALGDFAESYFYSDSVNDVPLLEAVTRPI  201 (232)
T ss_dssp             TCCGGGSSEEEEEECCGGGHHHHHHSSEEE
T ss_pred             CCCcCchhheEEEeCCHhhHHHHHhCCCeE
Confidence            7   78999999999998766555555544

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=96.65  E-value=0.00033  Score=62.37  Aligned_cols=92  Identities=11%  Similarity=0.108  Sum_probs=69.3

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHh--c---------CCCceeEEEecCcccccCC--ccccccccc
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRI--D---------GENLFSLRLYRPSTTSTEY--REHVKDLSC  218 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~L--D---------p~~~f~~~l~r~~c~~~k~--~~~~KdL~~  218 (285)
                      +...||+.++|+.   -+.++|.|++....++.+++..  +         ...+|...+...-+. .|.  ..|.+-+++
T Consensus       124 ~~~~pgv~e~L~~---g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g-~KP~p~~~~~a~~~  199 (253)
T 2g80_A          124 APVYADAIDFIKR---KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG-KKTETQSYANILRD  199 (253)
T ss_dssp             BCCCHHHHHHHHH---CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHC-CTTCHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHc---CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeeeccC-CCCCHHHHHHHHHH
Confidence            4568999999999   7999999999999999999876  2         334455444321111 233  367888899


Q ss_pred             cCCCCCcEEEEECCcccccCCCCCeeeeC
Q 023259          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       219 Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      +|.+++++|+|+|++.........|+.+-
T Consensus       200 lg~~p~~~l~vgDs~~di~aA~~aG~~~i  228 (253)
T 2g80_A          200 IGAKASEVLFLSDNPLELDAAAGVGIATG  228 (253)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred             cCCCcccEEEEcCCHHHHHHHHHcCCEEE
Confidence            99999999999999988776667776543

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=96.60  E-value=0.001  Score=58.62  Aligned_cols=94  Identities=13%  Similarity=0.146  Sum_probs=73.5

Q ss_pred             EeeCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCC------
Q 023259          152 VFERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSK------  221 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~--yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgr------  221 (285)
                      ....||+.++|+.+++.  +.++|.|++...+++.+++.++.. .|..+++.+.+...+..  .+.+-++.+|.      
T Consensus       113 ~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  191 (275)
T 2qlt_A          113 SIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQD  191 (275)
T ss_dssp             CEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSSC
T ss_pred             CCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCccccC
Confidence            45789999999999975  899999999999999999998765 36666666654433322  45666778898      


Q ss_pred             -CCCcEEEEECCcccccCCCCCeeee
Q 023259          222 -DLCRTLIVDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       222 -dl~~vVIVDDs~~~~~~~p~NgI~I  246 (285)
                       ++++++.|.|++.-.......|+.+
T Consensus       192 ~~~~~~i~~GDs~nDi~~a~~AG~~~  217 (275)
T 2qlt_A          192 PSKSKVVVFEDAPAGIAAGKAAGCKI  217 (275)
T ss_dssp             GGGSCEEEEESSHHHHHHHHHTTCEE
T ss_pred             CCcceEEEEeCCHHHHHHHHHcCCEE
Confidence             9999999999998776666666443

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=96.60  E-value=0.0055  Score=48.54  Aligned_cols=40  Identities=15%  Similarity=0.196  Sum_probs=29.6

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhh------------HHHHHHHhcCCC
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGY------------ARPLVDRIDGEN  193 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~Y------------A~~Vl~~LDp~~  193 (285)
                      ..|+..+.|+.+.+. +.++|.|......            +..+++.+...+
T Consensus        25 ~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~~nG~~~~~~~~~~~~i~~~~~~~~   77 (126)
T 1xpj_A           25 PRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQ   77 (126)
T ss_dssp             BCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHhCCCeEEEEeCCChhhccccccccCHHHHHHHHHHHHHcC
Confidence            467899999999877 9999999776543            556666665444

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=96.55  E-value=0.0004  Score=58.21  Aligned_cols=94  Identities=10%  Similarity=0.069  Sum_probs=74.4

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCce-eEEEecCccccc--CC--ccccccccccCCCCCcE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLF-SLRLYRPSTTST--EY--REHVKDLSCLSKDLCRT  226 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f-~~~l~r~~c~~~--k~--~~~~KdL~~Lgrdl~~v  226 (285)
                      +...||+.++|+.+..  .++|.|++...+++.+++.++...+| ..+++.+.+...  ++  ..+.+-++.+|.+++++
T Consensus        86 ~~~~~~~~~~l~~l~~--~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~  163 (229)
T 2fdr_A           86 VKIIDGVKFALSRLTT--PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRV  163 (229)
T ss_dssp             CCBCTTHHHHHHHCCS--CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             CccCcCHHHHHHHhCC--CEEEEECCChhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhHe
Confidence            4568999999999886  99999999999999999999887888 777776654333  32  24567778889999999


Q ss_pred             EEEECCcccccCCCCCeeeeC
Q 023259          227 LIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       227 VIVDDs~~~~~~~p~NgI~I~  247 (285)
                      +.|+|+..-.......|+.+-
T Consensus       164 i~iGD~~~Di~~a~~aG~~~i  184 (229)
T 2fdr_A          164 VVVEDSVHGIHGARAAGMRVI  184 (229)
T ss_dssp             EEEESSHHHHHHHHHTTCEEE
T ss_pred             EEEcCCHHHHHHHHHCCCEEE
Confidence            999999987766555665533

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=96.55  E-value=0.00036  Score=59.71  Aligned_cols=90  Identities=10%  Similarity=0.001  Sum_probs=65.0

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEEC
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDD  231 (285)
                      +...||+.++|+.|++...++|.|++...+++.+++.++...+|......   ...| ..+.+.+.. +.+++++++|+|
T Consensus        95 ~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~---~~~K-~~~~~~~~~-~~~~~~~~~vgD  169 (231)
T 2p11_A           95 SRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWDEVEGRVLI---YIHK-ELMLDQVME-CYPARHYVMVDD  169 (231)
T ss_dssp             GGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHHHTTTCEEE---ESSG-GGCHHHHHH-HSCCSEEEEECS
T ss_pred             CCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEe---cCCh-HHHHHHHHh-cCCCceEEEEcC
Confidence            45789999999999987789999999999999999998776666543321   1122 234444444 678899999999


Q ss_pred             Ccc---cccCCCCCeeee
Q 023259          232 NPF---SFLLQPLNGIPC  246 (285)
Q Consensus       232 s~~---~~~~~p~NgI~I  246 (285)
                      ++.   ........|+.+
T Consensus       170 s~~d~~di~~A~~aG~~~  187 (231)
T 2p11_A          170 KLRILAAMKKAWGARLTT  187 (231)
T ss_dssp             CHHHHHHHHHHHGGGEEE
T ss_pred             ccchhhhhHHHHHcCCeE
Confidence            997   444444566543

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=96.24  E-value=0.0013  Score=56.74  Aligned_cols=94  Identities=10%  Similarity=-0.058  Sum_probs=73.0

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce-eEEEecCcccccCC--ccccccccccCCCC-CcE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-SLRLYRPSTTSTEY--REHVKDLSCLSKDL-CRT  226 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f-~~~l~r~~c~~~k~--~~~~KdL~~Lgrdl-~~v  226 (285)
                      ....||+.++|+.+.+. +.++|.|++....++.+++.++...+| ...++.+.+...+.  ..+.+-++.+|.++ +++
T Consensus       102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  181 (267)
T 1swv_A          102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHM  181 (267)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGE
T ss_pred             cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcCE
Confidence            35679999999999987 999999999999999999998776665 66666555433332  24556677889998 999


Q ss_pred             EEEECCcccccCCCCCeee
Q 023259          227 LIVDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       227 VIVDDs~~~~~~~p~NgI~  245 (285)
                      +.|.|+..-.......|+.
T Consensus       182 i~iGD~~nDi~~a~~aG~~  200 (267)
T 1swv_A          182 IKVGDTVSDMKEGRNAGMW  200 (267)
T ss_dssp             EEEESSHHHHHHHHHTTSE
T ss_pred             EEEeCCHHHHHHHHHCCCE
Confidence            9999999877666666643

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=96.22  E-value=0.0095  Score=51.22  Aligned_cols=14  Identities=21%  Similarity=0.475  Sum_probs=12.6

Q ss_pred             eEEEEeCCCccccc
Q 023259           95 LTVVLDLDETLVCA  108 (285)
Q Consensus        95 ~tLVLDLD~TLV~s  108 (285)
                      +.+++||||||+++
T Consensus         4 kli~~DlDGTLl~~   17 (231)
T 1wr8_A            4 KAISIDIDGTITYP   17 (231)
T ss_dssp             CEEEEESTTTTBCT
T ss_pred             eEEEEECCCCCCCC
Confidence            67999999999985

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=96.19  E-value=0.0088  Score=52.97  Aligned_cols=61  Identities=21%  Similarity=0.122  Sum_probs=39.2

Q ss_pred             cCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-c
Q 023259           91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-A  169 (285)
Q Consensus        91 ~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-y  169 (285)
                      ....++++|||||||+++..  .                                        .-|...+.|+++.+. .
T Consensus        18 ~~~~kli~~DlDGTLl~~~~--~----------------------------------------i~~~~~~al~~l~~~G~   55 (285)
T 3pgv_A           18 QGMYQVVASDLDGTLLSPDH--F----------------------------------------LTPYAKETLKLLTARGI   55 (285)
T ss_dssp             ---CCEEEEECCCCCSCTTS--C----------------------------------------CCHHHHHHHHHHHTTTC
T ss_pred             cCcceEEEEeCcCCCCCCCC--c----------------------------------------CCHHHHHHHHHHHHCCC
Confidence            34678899999999998521  1                                        133455666666655 6


Q ss_pred             eEEEEccCchhhHHHHHHHhcCCC
Q 023259          170 DLILFTAGLEGYARPLVDRIDGEN  193 (285)
Q Consensus       170 eIvI~Ta~~~~YA~~Vl~~LDp~~  193 (285)
                      .++|.|.-...-+..+++.++...
T Consensus        56 ~v~iaTGR~~~~~~~~~~~l~~~~   79 (285)
T 3pgv_A           56 NFVFATGRHYIDVGQIRDNLGIRS   79 (285)
T ss_dssp             EEEEECSSCGGGGHHHHHHHCSCC
T ss_pred             EEEEEcCCCHHHHHHHHHhcCCCc
Confidence            777777666666677777666553

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=96.11  E-value=0.0062  Score=52.73  Aligned_cols=40  Identities=8%  Similarity=-0.055  Sum_probs=33.9

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~  193 (285)
                      ..|...+.|+++.+. +.++|.|......+..+++.++...
T Consensus        23 i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~   63 (227)
T 1l6r_A           23 ISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING   63 (227)
T ss_dssp             BCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             CCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC
Confidence            367788999999877 8999999999999999999887654

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=95.98  E-value=0.0069  Score=52.96  Aligned_cols=53  Identities=19%  Similarity=0.222  Sum_probs=37.0

Q ss_pred             ceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceEE
Q 023259           94 KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADLI  172 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-yeIv  172 (285)
                      .+.++|||||||+++..                                          .. |+..++|+.+.+. ..++
T Consensus         5 ~kli~~DlDGTLl~~~~------------------------------------------~i-~~~~eal~~l~~~G~~vv   41 (264)
T 3epr_A            5 YKGYLIDLDGTIYKGKS------------------------------------------RI-PAGERFIERLQEKGIPYM   41 (264)
T ss_dssp             CCEEEECCBTTTEETTE------------------------------------------EC-HHHHHHHHHHHHHTCCEE
T ss_pred             CCEEEEeCCCceEeCCE------------------------------------------EC-cCHHHHHHHHHHCCCeEE
Confidence            57899999999998421                                          13 7888889888877 8888


Q ss_pred             EEccCchhhHHHHHHHh
Q 023259          173 LFTAGLEGYARPLVDRI  189 (285)
Q Consensus       173 I~Ta~~~~YA~~Vl~~L  189 (285)
                      +.|+....-...+...+
T Consensus        42 l~Tn~~gr~~~~~~~~l   58 (264)
T 3epr_A           42 LVTNNTTRTPESVQEML   58 (264)
T ss_dssp             EEECCCSSCHHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHHH
Confidence            88864443333343333

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=95.93  E-value=0.013  Score=50.88  Aligned_cols=16  Identities=31%  Similarity=0.424  Sum_probs=13.6

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.+++||||||+++.
T Consensus         3 ~kli~~DlDGTLl~~~   18 (258)
T 2pq0_A            3 RKIVFFDIDGTLLDEQ   18 (258)
T ss_dssp             CCEEEECTBTTTBCTT
T ss_pred             ceEEEEeCCCCCcCCC
Confidence            4689999999999863

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=95.88  E-value=0.013  Score=51.31  Aligned_cols=56  Identities=27%  Similarity=0.231  Sum_probs=41.9

Q ss_pred             ceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceEE
Q 023259           94 KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADLI  172 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-yeIv  172 (285)
                      .+.++|||||||+++..  .                                        .-+...+.|+.+.+. ..++
T Consensus         5 ~kli~fDlDGTLl~~~~--~----------------------------------------i~~~~~~al~~l~~~G~~~~   42 (279)
T 4dw8_A            5 YKLIVLDLDGTLTNSKK--E----------------------------------------ISSRNRETLIRIQEQGIRLV   42 (279)
T ss_dssp             CCEEEECCCCCCSCTTS--C----------------------------------------CCHHHHHHHHHHHHTTCEEE
T ss_pred             ceEEEEeCCCCCCCCCC--c----------------------------------------cCHHHHHHHHHHHHCCCEEE
Confidence            57899999999998521  0                                        235566777787766 8888


Q ss_pred             EEccCchhhHHHHHHHhcC
Q 023259          173 LFTAGLEGYARPLVDRIDG  191 (285)
Q Consensus       173 I~Ta~~~~YA~~Vl~~LDp  191 (285)
                      +.|.-...-+..+++.++.
T Consensus        43 iaTGR~~~~~~~~~~~l~~   61 (279)
T 4dw8_A           43 LASGRPTYGIVPLANELRM   61 (279)
T ss_dssp             EECSSCHHHHHHHHHHTTG
T ss_pred             EEcCCChHHHHHHHHHhCC
Confidence            8888777778888887764

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=95.86  E-value=0.015  Score=50.86  Aligned_cols=58  Identities=16%  Similarity=0.156  Sum_probs=37.1

Q ss_pred             ceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceEE
Q 023259           94 KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADLI  172 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-yeIv  172 (285)
                      .+.++|||||||+++..                                          ..-+...+.|+++.+. ..++
T Consensus         5 ~kli~~DlDGTLl~~~~------------------------------------------~i~~~~~~al~~l~~~G~~~~   42 (279)
T 3mpo_A            5 IKLIAIDIDGTLLNEKN------------------------------------------ELAQATIDAVQAAKAQGIKVV   42 (279)
T ss_dssp             CCEEEECC-----------------------------------------------------CHHHHHHHHHHHHTTCEEE
T ss_pred             eEEEEEcCcCCCCCCCC------------------------------------------cCCHHHHHHHHHHHHCCCEEE
Confidence            57899999999998521                                          0235566778888766 8888


Q ss_pred             EEccCchhhHHHHHHHhcCCC
Q 023259          173 LFTAGLEGYARPLVDRIDGEN  193 (285)
Q Consensus       173 I~Ta~~~~YA~~Vl~~LDp~~  193 (285)
                      +.|.-...-+..+++.++...
T Consensus        43 iaTGR~~~~~~~~~~~l~~~~   63 (279)
T 3mpo_A           43 LCTGRPLTGVQPYLDAMDIDG   63 (279)
T ss_dssp             EECSSCHHHHHHHHHHTTCCS
T ss_pred             EEcCCCHHHHHHHHHHcCCCC
Confidence            888888888888888887643

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=95.73  E-value=0.016  Score=51.00  Aligned_cols=17  Identities=24%  Similarity=0.378  Sum_probs=14.0

Q ss_pred             CceEEEEeCCCcccccc
Q 023259           93 QKLTVVLDLDETLVCAY  109 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s~  109 (285)
                      ..+.++|||||||+++.
T Consensus         5 ~~kli~fDlDGTLl~~~   21 (290)
T 3dnp_A            5 SKQLLALNIDGALLRSN   21 (290)
T ss_dssp             -CCEEEECCCCCCSCTT
T ss_pred             cceEEEEcCCCCCCCCC
Confidence            35789999999999863

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=95.73  E-value=0.013  Score=50.96  Aligned_cols=23  Identities=26%  Similarity=0.342  Sum_probs=17.6

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCc
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGL  178 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~  178 (285)
                      |+..+.|+.+.+. ..+++.|..+
T Consensus        27 ~~~~~ai~~l~~~Gi~v~l~Tgr~   50 (268)
T 3qgm_A           27 PEGVEGVKKLKELGKKIIFVSNNS   50 (268)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECCS
T ss_pred             cCHHHHHHHHHHcCCeEEEEeCcC
Confidence            6678888888877 7788888743

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=94.65  E-value=0.0019  Score=57.37  Aligned_cols=87  Identities=15%  Similarity=0.267  Sum_probs=70.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVD  230 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVD  230 (285)
                      ...|||+.++|+.|++. +.++|.|+.....++.+++.++...+|..++         ...+.+-++.++.+.++++.|.
T Consensus       135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~---------p~~k~~~~~~l~~~~~~~~~VG  205 (263)
T 2yj3_A          135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLS---------PEDKVRIIEKLKQNGNKVLMIG  205 (263)
Confidence            45899999999999987 9999999999999999999998877776554         1233456677788889999999


Q ss_pred             CCcccccCCCCCeeeeC
Q 023259          231 NNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       231 Ds~~~~~~~p~NgI~I~  247 (285)
                      |+..-.......|+.|.
T Consensus       206 D~~~D~~aa~~Agv~va  222 (263)
T 2yj3_A          206 DGVNDAAALALADVSVA  222 (263)
Confidence            99887776666776543

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=95.65  E-value=0.024  Score=50.18  Aligned_cols=38  Identities=16%  Similarity=0.127  Sum_probs=30.6

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~  193 (285)
                      |...+.|+.+.+. ..++|-|.-....+..+++.++...
T Consensus        29 ~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   67 (275)
T 1xvi_A           29 QPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG   67 (275)
T ss_dssp             CTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence            3457888888877 8899999988888889998887653

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=95.63  E-value=0.02  Score=50.77  Aligned_cols=15  Identities=33%  Similarity=0.476  Sum_probs=13.1

Q ss_pred             ceEEEEeCCCccccc
Q 023259           94 KLTVVLDLDETLVCA  108 (285)
Q Consensus        94 k~tLVLDLD~TLV~s  108 (285)
                      .+.+++||||||+++
T Consensus         4 ikli~~DlDGTLl~~   18 (288)
T 1nrw_A            4 MKLIAIDLDGTLLNS   18 (288)
T ss_dssp             CCEEEEECCCCCSCT
T ss_pred             eEEEEEeCCCCCCCC
Confidence            468999999999985

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=95.43  E-value=0.013  Score=50.88  Aligned_cols=16  Identities=31%  Similarity=0.314  Sum_probs=14.0

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++|||||||+++.
T Consensus         5 ~kli~fDlDGTLl~~~   20 (274)
T 3fzq_A            5 YKLLILDIDGTLRDEV   20 (274)
T ss_dssp             CCEEEECSBTTTBBTT
T ss_pred             ceEEEEECCCCCCCCC
Confidence            5789999999999864

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=95.41  E-value=0.019  Score=50.75  Aligned_cols=18  Identities=28%  Similarity=0.098  Sum_probs=14.9

Q ss_pred             CCceEEEEeCCCcccccc
Q 023259           92 LQKLTVVLDLDETLVCAY  109 (285)
Q Consensus        92 ~~k~tLVLDLD~TLV~s~  109 (285)
                      ...+.+++||||||+++.
T Consensus        19 ~~~kli~~DlDGTLl~~~   36 (283)
T 3dao_A           19 GMIKLIATDIDGTLVKDG   36 (283)
T ss_dssp             CCCCEEEECCBTTTBSTT
T ss_pred             cCceEEEEeCcCCCCCCC
Confidence            356789999999999753

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=95.33  E-value=0.025  Score=49.34  Aligned_cols=34  Identities=21%  Similarity=0.372  Sum_probs=21.7

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI  189 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~L  189 (285)
                      |+..++|+.+.+. ..+++.|+....-...+.+++
T Consensus        20 ~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l   54 (263)
T 1zjj_A           20 PGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKL   54 (263)
T ss_dssp             TTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHH
T ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence            6677777777765 777777766554444444443

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=95.28  E-value=0.025  Score=52.92  Aligned_cols=57  Identities=23%  Similarity=0.296  Sum_probs=44.1

Q ss_pred             CCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-ce
Q 023259           92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-AD  170 (285)
Q Consensus        92 ~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-ye  170 (285)
                      .+++.++||+||||++...                                           .=||+.++|+.|.+. ..
T Consensus        11 ~~~~~~l~D~DGvl~~g~~-------------------------------------------~~p~a~~~l~~l~~~g~~   47 (352)
T 3kc2_A           11 SKKIAFAFDIDGVLFRGKK-------------------------------------------PIAGASDALKLLNRNKIP   47 (352)
T ss_dssp             -CCEEEEECCBTTTEETTE-------------------------------------------ECTTHHHHHHHHHHTTCC
T ss_pred             ccCCEEEEECCCeeEcCCe-------------------------------------------eCcCHHHHHHHHHHCCCE
Confidence            3688999999999997310                                           138999999999987 99


Q ss_pred             EEEEccCc----hhhHHHHHHHhcC
Q 023259          171 LILFTAGL----EGYARPLVDRIDG  191 (285)
Q Consensus       171 IvI~Ta~~----~~YA~~Vl~~LDp  191 (285)
                      +++.|++.    +.+++.+.+.++.
T Consensus        48 ~~~vTNn~~~~~~~~~~~l~~~lgi   72 (352)
T 3kc2_A           48 YILLTNGGGFSERARTEFISSKLDV   72 (352)
T ss_dssp             EEEECSCCSSCHHHHHHHHHHHHTS
T ss_pred             EEEEeCCCCCCchHHHHHHHHhcCC
Confidence            99999875    5677766655553

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=95.23  E-value=0.016  Score=50.43  Aligned_cols=15  Identities=27%  Similarity=0.306  Sum_probs=13.3

Q ss_pred             ceEEEEeCCCccccc
Q 023259           94 KLTVVLDLDETLVCA  108 (285)
Q Consensus        94 k~tLVLDLD~TLV~s  108 (285)
                      .++++|||||||+++
T Consensus         6 ~kli~~DlDGTLl~~   20 (266)
T 3pdw_A            6 YKGYLIDLDGTMYNG   20 (266)
T ss_dssp             CSEEEEECSSSTTCH
T ss_pred             CCEEEEeCcCceEeC
Confidence            578999999999974

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=95.15  E-value=0.03  Score=48.59  Aligned_cols=16  Identities=25%  Similarity=0.324  Sum_probs=13.9

Q ss_pred             CceEEEEeCCCccccc
Q 023259           93 QKLTVVLDLDETLVCA  108 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s  108 (285)
                      ..++++|||||||+++
T Consensus        16 ~~~~v~~DlDGTLl~~   31 (271)
T 1vjr_A           16 KIELFILDMDGTFYLD   31 (271)
T ss_dssp             GCCEEEECCBTTTEET
T ss_pred             CCCEEEEcCcCcEEeC
Confidence            4678999999999985

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=95.12  E-value=0.031  Score=49.49  Aligned_cols=37  Identities=11%  Similarity=0.156  Sum_probs=28.4

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~  192 (285)
                      |...+.|+++.+. ..++|.|.-....+..+++.++..
T Consensus        25 ~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~   62 (282)
T 1rkq_A           25 PAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHME   62 (282)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence            4456778888777 788888888777788888887654

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=95.11  E-value=0.041  Score=48.26  Aligned_cols=14  Identities=43%  Similarity=0.527  Sum_probs=12.5

Q ss_pred             eEEEEeCCCccccc
Q 023259           95 LTVVLDLDETLVCA  108 (285)
Q Consensus        95 ~tLVLDLD~TLV~s  108 (285)
                      +.+++||||||+++
T Consensus         3 kli~~DlDGTLl~~   16 (268)
T 1nf2_A            3 RVFVFDLDGTLLND   16 (268)
T ss_dssp             CEEEEECCCCCSCT
T ss_pred             cEEEEeCCCcCCCC
Confidence            67999999999985

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=94.82  E-value=0.047  Score=47.49  Aligned_cols=35  Identities=9%  Similarity=0.215  Sum_probs=27.9

Q ss_pred             HHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023259          158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (285)
Q Consensus       158 l~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~  192 (285)
                      ..+.|+.+.+. ..++|.|......+..+++.++..
T Consensus        22 ~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~   57 (249)
T 2zos_A           22 AKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE   57 (249)
T ss_dssp             GHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            56778888776 888888888888888888888764

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=94.65  E-value=0.052  Score=45.27  Aligned_cols=30  Identities=23%  Similarity=0.242  Sum_probs=19.7

Q ss_pred             ccccCCCCCcEEEEECC-cccccCCCCCeee
Q 023259          216 LSCLSKDLCRTLIVDNN-PFSFLLQPLNGIP  245 (285)
Q Consensus       216 L~~Lgrdl~~vVIVDDs-~~~~~~~p~NgI~  245 (285)
                      ++.+|.++++++.|.|+ ..-.......|+.
T Consensus       186 ~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~  216 (250)
T 2c4n_A          186 LNKMQAHSEETVIVGDNLRTDILAGFQAGLE  216 (250)
T ss_dssp             HHHHTCCGGGEEEEESCTTTHHHHHHHTTCE
T ss_pred             HHHcCCCcceEEEECCCchhHHHHHHHcCCe
Confidence            34456688889999988 4665554455544

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=94.63  E-value=0.039  Score=48.49  Aligned_cols=37  Identities=14%  Similarity=0.131  Sum_probs=25.6

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccC---chhhHHHHHHHhcCC
Q 023259          156 PGLREFLKQLSEF-ADLILFTAG---LEGYARPLVDRIDGE  192 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~---~~~YA~~Vl~~LDp~  192 (285)
                      |+..++|+.+.+. ..+++.|+.   ........++.++..
T Consensus        33 ~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~   73 (284)
T 2hx1_A           33 PGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF   73 (284)
T ss_dssp             TTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred             hhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence            7888999999877 899999973   333344455555443

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=94.53  E-value=0.053  Score=46.85  Aligned_cols=33  Identities=18%  Similarity=0.211  Sum_probs=22.8

Q ss_pred             cccccccCCCCCcEEEEECCc-ccccCCCCCeee
Q 023259          213 VKDLSCLSKDLCRTLIVDNNP-FSFLLQPLNGIP  245 (285)
Q Consensus       213 ~KdL~~Lgrdl~~vVIVDDs~-~~~~~~p~NgI~  245 (285)
                      .+-++.+|.+++++++|+|++ .-.......|+.
T Consensus       190 ~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~  223 (264)
T 1yv9_A          190 ERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGID  223 (264)
T ss_dssp             HHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCE
T ss_pred             HHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCc
Confidence            334566678899999999995 655555555554

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=94.37  E-value=0.055  Score=48.67  Aligned_cols=35  Identities=9%  Similarity=-0.066  Sum_probs=27.1

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHH--HHhc
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLV--DRID  190 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl--~~LD  190 (285)
                      |...+.|+++.+. ..++|-|.-....+..++  +.++
T Consensus        48 ~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~   85 (301)
T 2b30_A           48 SENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLK   85 (301)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHH
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhc
Confidence            4566778888776 888888888888888888  7765

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=94.20  E-value=0.068  Score=46.81  Aligned_cols=16  Identities=31%  Similarity=0.519  Sum_probs=13.5

Q ss_pred             CceEEEEeCCCccccc
Q 023259           93 QKLTVVLDLDETLVCA  108 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s  108 (285)
                      ..+.+++||||||+++
T Consensus        12 ~~kli~~DlDGTLl~~   27 (262)
T 2fue_A           12 ERVLCLFDVDGTLTPA   27 (262)
T ss_dssp             -CEEEEEESBTTTBST
T ss_pred             CeEEEEEeCccCCCCC
Confidence            5688999999999974

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=94.15  E-value=0.03  Score=50.05  Aligned_cols=17  Identities=18%  Similarity=0.260  Sum_probs=14.6

Q ss_pred             CceEEEEeCCCcccccc
Q 023259           93 QKLTVVLDLDETLVCAY  109 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s~  109 (285)
                      ..++++|||||||+++.
T Consensus        36 ~iKli~fDlDGTLld~~   52 (304)
T 3l7y_A           36 SVKVIATDMDGTFLNSK   52 (304)
T ss_dssp             CCSEEEECCCCCCSCTT
T ss_pred             eeEEEEEeCCCCCCCCC
Confidence            46889999999999863

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=94.15  E-value=0.068  Score=47.70  Aligned_cols=21  Identities=24%  Similarity=0.506  Sum_probs=17.2

Q ss_pred             ccHHHHHHHhhhc-ceEEEEcc
Q 023259          156 PGLREFLKQLSEF-ADLILFTA  176 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta  176 (285)
                      |+..++|+.+.+. +.+++.|+
T Consensus        40 ~~~~~~l~~l~~~g~~~~~~Tn   61 (306)
T 2oyc_A           40 PGAPELLERLARAGKAALFVSN   61 (306)
T ss_dssp             TTHHHHHHHHHHTTCEEEEEEC
T ss_pred             cCHHHHHHHHHHCCCeEEEEEC
Confidence            6788888888877 88888885

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=94.01  E-value=0.038  Score=48.51  Aligned_cols=15  Identities=27%  Similarity=0.379  Sum_probs=13.2

Q ss_pred             ceEEEEeCCCccccc
Q 023259           94 KLTVVLDLDETLVCA  108 (285)
Q Consensus        94 k~tLVLDLD~TLV~s  108 (285)
                      .+.+++||||||+++
T Consensus         3 ~kli~~DlDGTLl~~   17 (271)
T 1rlm_A            3 VKVIVTDMDGTFLND   17 (271)
T ss_dssp             CCEEEECCCCCCSCT
T ss_pred             ccEEEEeCCCCCCCC
Confidence            468999999999985

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=93.97  E-value=0.087  Score=44.78  Aligned_cols=30  Identities=7%  Similarity=0.093  Sum_probs=21.1

Q ss_pred             ccccCCCCCcEEEEECCc-ccccCCCCCeee
Q 023259          216 LSCLSKDLCRTLIVDNNP-FSFLLQPLNGIP  245 (285)
Q Consensus       216 L~~Lgrdl~~vVIVDDs~-~~~~~~p~NgI~  245 (285)
                      ++.+|.++++++.|.|+. .-.......|+.
T Consensus       200 ~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~  230 (271)
T 2x4d_A          200 LQAIGVEAHQAVMIGDDIVGDVGGAQRCGMR  230 (271)
T ss_dssp             HHHHTCCGGGEEEEESCTTTTHHHHHHTTCE
T ss_pred             HHHhCCCcceEEEECCCcHHHHHHHHHCCCc
Confidence            455677899999999998 666554445543

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=93.92  E-value=0.029  Score=48.78  Aligned_cols=14  Identities=36%  Similarity=0.513  Sum_probs=12.6

Q ss_pred             eEEEEeCCCccccc
Q 023259           95 LTVVLDLDETLVCA  108 (285)
Q Consensus        95 ~tLVLDLD~TLV~s  108 (285)
                      +.+++||||||+++
T Consensus         3 kli~~DlDGTLl~~   16 (261)
T 2rbk_A            3 KALFFDIDGTLVSF   16 (261)
T ss_dssp             CEEEECSBTTTBCT
T ss_pred             cEEEEeCCCCCcCC
Confidence            67999999999985

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=93.87  E-value=0.098  Score=45.11  Aligned_cols=16  Identities=25%  Similarity=0.364  Sum_probs=14.2

Q ss_pred             CceEEEEeCCCccccc
Q 023259           93 QKLTVVLDLDETLVCA  108 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s  108 (285)
                      +++.+++||||||+.+
T Consensus         5 ~~kli~~DlDGTLl~~   20 (246)
T 2amy_A            5 GPALCLFDVDGTLTAP   20 (246)
T ss_dssp             CSEEEEEESBTTTBCT
T ss_pred             CceEEEEECCCCcCCC
Confidence            5789999999999974

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=93.77  E-value=0.095  Score=45.86  Aligned_cols=52  Identities=13%  Similarity=0.135  Sum_probs=36.4

Q ss_pred             ceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceEE
Q 023259           94 KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADLI  172 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-yeIv  172 (285)
                      .+.+++||||||+++..  .                                        .-|...+.|+++.+. ..++
T Consensus         4 ~kli~~DlDGTLl~~~~--~----------------------------------------i~~~~~~~l~~l~~~g~~~~   41 (246)
T 3f9r_A            4 RVLLLFDVDGTLTPPRL--C----------------------------------------QTDEMRALIKRARGAGFCVG   41 (246)
T ss_dssp             SEEEEECSBTTTBSTTS--C----------------------------------------CCHHHHHHHHHHHHTTCEEE
T ss_pred             ceEEEEeCcCCcCCCCC--c----------------------------------------cCHHHHHHHHHHHHCCCEEE
Confidence            67899999999997421  0                                        235567788888877 7788


Q ss_pred             EEccCchhhHHHHHHHhc
Q 023259          173 LFTAGLEGYARPLVDRID  190 (285)
Q Consensus       173 I~Ta~~~~YA~~Vl~~LD  190 (285)
                      |-|......   +.+.++
T Consensus        42 iaTGR~~~~---~~~~l~   56 (246)
T 3f9r_A           42 TVGGSDFAK---QVEQLG   56 (246)
T ss_dssp             EECSSCHHH---HHHHHC
T ss_pred             EECCCCHHH---HHHHhh
Confidence            877776553   444444

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=93.37  E-value=0.068  Score=46.24  Aligned_cols=16  Identities=31%  Similarity=0.395  Sum_probs=13.8

Q ss_pred             CceEEEEeCCCccccc
Q 023259           93 QKLTVVLDLDETLVCA  108 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s  108 (285)
                      ..+.++|||||||+++
T Consensus        11 miKli~~DlDGTLl~~   26 (268)
T 3r4c_A           11 MIKVLLLDVDGTLLSF   26 (268)
T ss_dssp             CCCEEEECSBTTTBCT
T ss_pred             ceEEEEEeCCCCCcCC
Confidence            3588999999999983

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=92.65  E-value=0.098  Score=45.35  Aligned_cols=14  Identities=43%  Similarity=0.541  Sum_probs=12.3

Q ss_pred             eEEEEeCCCccccc
Q 023259           95 LTVVLDLDETLVCA  108 (285)
Q Consensus        95 ~tLVLDLD~TLV~s  108 (285)
                      ..+++||||||+++
T Consensus         4 ~li~~DlDGTLl~~   17 (244)
T 1s2o_A            4 LLLISDLDNTWVGD   17 (244)
T ss_dssp             EEEEECTBTTTBSC
T ss_pred             eEEEEeCCCCCcCC
Confidence            48899999999974

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=90.88  E-value=0.23  Score=43.03  Aligned_cols=13  Identities=46%  Similarity=0.496  Sum_probs=11.7

Q ss_pred             EEEEeCCCccccc
Q 023259           96 TVVLDLDETLVCA  108 (285)
Q Consensus        96 tLVLDLD~TLV~s  108 (285)
                      .++|||||||+++
T Consensus         2 li~~DlDGTLl~~   14 (259)
T 3zx4_A            2 IVFTDLDGTLLDE   14 (259)
T ss_dssp             EEEECCCCCCSCS
T ss_pred             EEEEeCCCCCcCC
Confidence            6899999999985

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=90.71  E-value=0.086  Score=44.60  Aligned_cols=17  Identities=24%  Similarity=0.378  Sum_probs=14.6

Q ss_pred             CceEEEEeCCCcccccc
Q 023259           93 QKLTVVLDLDETLVCAY  109 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s~  109 (285)
                      ..+.++|||||||+++.
T Consensus        10 ~~k~viFDlDGTL~ds~   26 (231)
T 2p11_A           10 HDIVFLFDCDNTLLDND   26 (231)
T ss_dssp             CSEEEEECCBTTTBCHH
T ss_pred             CCeEEEEcCCCCCEecH
Confidence            46789999999999864

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=90.50  E-value=0.1  Score=45.53  Aligned_cols=22  Identities=27%  Similarity=0.237  Sum_probs=17.8

Q ss_pred             ccccCCceEEEEeCCCcccccc
Q 023259           88 SEERLQKLTVVLDLDETLVCAY  109 (285)
Q Consensus        88 ~~~~~~k~tLVLDLD~TLV~s~  109 (285)
                      .......+.++|||||||+++.
T Consensus        12 ~~~~~~~k~viFDlDGTLvds~   33 (260)
T 2gfh_A           12 HMGLSRVRAVFFDLDNTLIDTA   33 (260)
T ss_dssp             CEECCCCCEEEECCBTTTBCHH
T ss_pred             hcccccceEEEEcCCCCCCCCH
Confidence            3455677899999999999874

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=90.34  E-value=0.23  Score=42.85  Aligned_cols=35  Identities=17%  Similarity=0.129  Sum_probs=23.4

Q ss_pred             CccHHHHHHHhhhcceEEEEccCchhhHHHHHHHh
Q 023259          155 RPGLREFLKQLSEFADLILFTAGLEGYARPLVDRI  189 (285)
Q Consensus       155 RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~L  189 (285)
                      -|...+.|+.+.+.-.++|-|.-....+..+++.+
T Consensus        25 ~~~~~~al~~l~~~g~v~iaTGR~~~~~~~~~~~l   59 (239)
T 1u02_A           25 DAGLLSLISDLKERFDTYIVTGRSPEEISRFLPLD   59 (239)
T ss_dssp             CHHHHHHHHHHHHHSEEEEECSSCHHHHHHHSCSS
T ss_pred             CHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHhccc
Confidence            46677888888765566666666666666665544

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=89.95  E-value=0.1  Score=42.02  Aligned_cols=16  Identities=31%  Similarity=0.374  Sum_probs=13.8

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++|||||||+++.
T Consensus         6 ~k~i~fDlDGTL~d~~   21 (190)
T 2fi1_A            6 YHDYIWDLGGTLLDNY   21 (190)
T ss_dssp             CSEEEECTBTTTBCHH
T ss_pred             ccEEEEeCCCCcCCCH
Confidence            4789999999999863

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=89.90  E-value=0.11  Score=43.30  Aligned_cols=16  Identities=38%  Similarity=0.436  Sum_probs=13.8

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++|||||||+++.
T Consensus         4 ~k~viFDlDGTL~d~~   19 (210)
T 2ah5_A            4 ITAIFFDLDGTLVDSS   19 (210)
T ss_dssp             CCEEEECSBTTTEECH
T ss_pred             CCEEEEcCCCcCccCH
Confidence            4689999999999964

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=89.68  E-value=0.13  Score=43.03  Aligned_cols=16  Identities=31%  Similarity=0.378  Sum_probs=13.8

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      ++.+|||+||||+++.
T Consensus         4 ~k~viFDlDGTL~d~~   19 (232)
T 3fvv_A            4 RRLALFDLDHTLLPLD   19 (232)
T ss_dssp             CEEEEECCBTTTBSSC
T ss_pred             CcEEEEeCCCCCcCCc
Confidence            5789999999999863

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=89.21  E-value=0.11  Score=42.47  Aligned_cols=15  Identities=27%  Similarity=0.363  Sum_probs=13.1

Q ss_pred             eEEEEeCCCcccccc
Q 023259           95 LTVVLDLDETLVCAY  109 (285)
Q Consensus        95 ~tLVLDLD~TLV~s~  109 (285)
                      +.++|||||||+++.
T Consensus         3 k~i~fDlDGTL~d~~   17 (221)
T 2wf7_A            3 KAVLFDLDGVITDTA   17 (221)
T ss_dssp             CEEEECCBTTTBTHH
T ss_pred             cEEEECCCCcccCCh
Confidence            579999999999864

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=89.04  E-value=0.15  Score=41.58  Aligned_cols=16  Identities=13%  Similarity=0.115  Sum_probs=13.7

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++||+||||+++.
T Consensus         4 ~k~viFDlDGTL~d~~   19 (200)
T 3cnh_A            4 IKALFWDIGGVLLTNG   19 (200)
T ss_dssp             CCEEEECCBTTTBCCS
T ss_pred             ceEEEEeCCCeeECCC
Confidence            4689999999999853

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=89.02  E-value=0.13  Score=43.66  Aligned_cols=16  Identities=31%  Similarity=0.092  Sum_probs=13.9

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++|||||||+++.
T Consensus        13 ~k~iifDlDGTL~d~~   28 (251)
T 2pke_A           13 IQLVGFDGDDTLWKSE   28 (251)
T ss_dssp             CCEEEECCBTTTBCCH
T ss_pred             eeEEEEeCCCCCccCc
Confidence            4689999999999863

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=89.00  E-value=0.13  Score=41.30  Aligned_cols=16  Identities=44%  Similarity=0.659  Sum_probs=13.6

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++|||||||+++.
T Consensus         4 ~k~i~fDlDGTL~~~~   19 (207)
T 2go7_A            4 KTAFIWDLDGTLLDSY   19 (207)
T ss_dssp             CCEEEECTBTTTEECH
T ss_pred             ccEEEEeCCCcccccH
Confidence            4689999999999863

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=88.94  E-value=0.13  Score=43.75  Aligned_cols=16  Identities=19%  Similarity=0.326  Sum_probs=13.7

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++|||||||+++.
T Consensus         4 ~k~viFDlDGTL~ds~   19 (240)
T 2hi0_A            4 YKAAIFDMDGTILDTS   19 (240)
T ss_dssp             CSEEEECSBTTTEECH
T ss_pred             ccEEEEecCCCCccCH
Confidence            3689999999999974

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=88.64  E-value=0.15  Score=41.74  Aligned_cols=16  Identities=25%  Similarity=0.420  Sum_probs=13.8

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++|||||||+++.
T Consensus         9 ~k~i~fDlDGTL~~~~   24 (226)
T 1te2_A            9 ILAAIFDMDGLLIDSE   24 (226)
T ss_dssp             CCEEEECCBTTTBCCH
T ss_pred             CCEEEECCCCCcCcCH
Confidence            5789999999999863

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=88.58  E-value=0.18  Score=41.34  Aligned_cols=16  Identities=25%  Similarity=0.270  Sum_probs=14.0

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++|||||||+++.
T Consensus         8 ik~i~fDlDGTL~~~~   23 (234)
T 3ddh_A            8 IKVIAFDADDTLWSNE   23 (234)
T ss_dssp             CCEEEECCBTTTBCCH
T ss_pred             ccEEEEeCCCCCccCc
Confidence            4789999999999864

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=88.57  E-value=0.14  Score=42.03  Aligned_cols=16  Identities=25%  Similarity=0.372  Sum_probs=13.7

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++|||||||+++.
T Consensus         4 ~k~iifDlDGTL~d~~   19 (209)
T 2hdo_A            4 YQALMFDIDGTLTNSQ   19 (209)
T ss_dssp             CSEEEECSBTTTEECH
T ss_pred             ccEEEEcCCCCCcCCH
Confidence            4689999999999864

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=88.53  E-value=0.16  Score=41.85  Aligned_cols=16  Identities=25%  Similarity=0.195  Sum_probs=13.7

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++|||||||+++.
T Consensus         4 ik~i~fDlDGTL~d~~   19 (229)
T 2fdr_A            4 FDLIIFDCDGVLVDSE   19 (229)
T ss_dssp             CSEEEECSBTTTBCCH
T ss_pred             ccEEEEcCCCCcCccH
Confidence            4689999999999863

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=88.32  E-value=0.14  Score=42.20  Aligned_cols=16  Identities=25%  Similarity=0.106  Sum_probs=13.6

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++|||||||+++.
T Consensus         4 ~k~i~fDlDGTL~d~~   19 (235)
T 2om6_A            4 VKLVTFDVWNTLLDLN   19 (235)
T ss_dssp             CCEEEECCBTTTBCHH
T ss_pred             ceEEEEeCCCCCCCcc
Confidence            3689999999999863

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=88.24  E-value=0.15  Score=42.38  Aligned_cols=16  Identities=25%  Similarity=0.324  Sum_probs=13.6

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      -+.++|||||||+++.
T Consensus         2 ik~i~fDlDGTL~d~~   17 (233)
T 3nas_A            2 LKAVIFDLDGVITDTA   17 (233)
T ss_dssp             CCEEEECSBTTTBCHH
T ss_pred             CcEEEECCCCCcCCCH
Confidence            3689999999999863

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=87.92  E-value=0.19  Score=42.92  Aligned_cols=16  Identities=19%  Similarity=-0.054  Sum_probs=13.8

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++|||||||+++.
T Consensus         6 ik~i~fDlDGTLld~~   21 (267)
T 1swv_A            6 IEAVIFAWAGTTVDYG   21 (267)
T ss_dssp             CCEEEECSBTTTBSTT
T ss_pred             ceEEEEecCCCEEeCC
Confidence            4689999999999863

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=87.87  E-value=0.16  Score=42.87  Aligned_cols=15  Identities=40%  Similarity=0.547  Sum_probs=13.2

Q ss_pred             eEEEEeCCCcccccc
Q 023259           95 LTVVLDLDETLVCAY  109 (285)
Q Consensus        95 ~tLVLDLD~TLV~s~  109 (285)
                      +.++|||||||+++.
T Consensus         3 k~iiFDlDGTL~d~~   17 (241)
T 2hoq_A            3 KVIFFDLDDTLVDTS   17 (241)
T ss_dssp             CEEEECSBTTTBCHH
T ss_pred             cEEEEcCCCCCCCCh
Confidence            579999999999864

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=87.77  E-value=0.18  Score=41.80  Aligned_cols=17  Identities=24%  Similarity=0.376  Sum_probs=14.2

Q ss_pred             CceEEEEeCCCcccccc
Q 023259           93 QKLTVVLDLDETLVCAY  109 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s~  109 (285)
                      ..+.++|||||||+++.
T Consensus         6 ~~k~i~fDlDGTL~d~~   22 (238)
T 3ed5_A            6 RYRTLLFDVDDTILDFQ   22 (238)
T ss_dssp             CCCEEEECCBTTTBCHH
T ss_pred             cCCEEEEcCcCcCcCCc
Confidence            35789999999999863

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=87.56  E-value=0.19  Score=41.40  Aligned_cols=16  Identities=31%  Similarity=0.495  Sum_probs=14.0

Q ss_pred             CceEEEEeCCCccccc
Q 023259           93 QKLTVVLDLDETLVCA  108 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s  108 (285)
                      ..+.++|||||||+++
T Consensus         5 ~~k~i~fDlDGTL~~~   20 (233)
T 3s6j_A            5 PQTSFIFDLDGTLTDS   20 (233)
T ss_dssp             CCCEEEECCBTTTEEC
T ss_pred             cCcEEEEcCCCccccC
Confidence            3678999999999986

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=87.26  E-value=0.18  Score=41.65  Aligned_cols=16  Identities=19%  Similarity=-0.025  Sum_probs=13.9

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++||+||||+++.
T Consensus         6 ~k~i~fD~DGTL~d~~   21 (240)
T 3smv_A            6 FKALTFDCYGTLIDWE   21 (240)
T ss_dssp             CSEEEECCBTTTBCHH
T ss_pred             ceEEEEeCCCcCcCCc
Confidence            5789999999999863

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=87.24  E-value=0.19  Score=41.62  Aligned_cols=16  Identities=25%  Similarity=0.032  Sum_probs=13.6

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++||+||||+++.
T Consensus         2 ik~i~fDlDGTL~d~~   17 (234)
T 3u26_A            2 IRAVFFDSLGTLNSVE   17 (234)
T ss_dssp             CCEEEECSTTTTBCHH
T ss_pred             CcEEEEcCCCcccccc
Confidence            3689999999999864

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=87.06  E-value=0.21  Score=41.77  Aligned_cols=16  Identities=31%  Similarity=0.306  Sum_probs=13.8

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++||+||||+++.
T Consensus         3 ~k~viFDlDGTL~d~~   18 (220)
T 2zg6_A            3 YKAVLVDFGNTLVGFK   18 (220)
T ss_dssp             CCEEEECSBTTTEEEE
T ss_pred             ceEEEEcCCCceeccc
Confidence            4689999999999864

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=86.96  E-value=0.21  Score=41.27  Aligned_cols=16  Identities=38%  Similarity=0.316  Sum_probs=13.6

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++||+||||+++.
T Consensus         2 ik~i~fDlDGTL~~~~   17 (230)
T 3vay_A            2 IKLVTFDLDDTLWDTA   17 (230)
T ss_dssp             CCEEEECCBTTTBCSH
T ss_pred             eeEEEecCcccCcCCc
Confidence            3689999999999863

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=86.63  E-value=0.2  Score=41.76  Aligned_cols=17  Identities=24%  Similarity=0.038  Sum_probs=14.5

Q ss_pred             CceEEEEeCCCcccccc
Q 023259           93 QKLTVVLDLDETLVCAY  109 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s~  109 (285)
                      ..+.++|||||||+++.
T Consensus        14 ~~k~i~fDlDGTL~d~~   30 (254)
T 3umg_A           14 NVRAVLFDTFGTVVDWR   30 (254)
T ss_dssp             BCCEEEECCBTTTBCHH
T ss_pred             CceEEEEeCCCceecCc
Confidence            46789999999999863

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=86.42  E-value=0.25  Score=44.75  Aligned_cols=40  Identities=15%  Similarity=0.118  Sum_probs=33.4

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcC
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDG  191 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp  191 (285)
                      +..+|++.++|+.+.+.+.++|+|.....|+..+++.+..
T Consensus       102 ~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~~~~  141 (332)
T 1y8a_A          102 AKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASMIGV  141 (332)
T ss_dssp             CCBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHcCCcEEEEECCceEEEcccchhhhh
Confidence            3568999999999988677899999888899888877643

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=86.26  E-value=0.24  Score=40.96  Aligned_cols=17  Identities=24%  Similarity=0.331  Sum_probs=14.2

Q ss_pred             CceEEEEeCCCcccccc
Q 023259           93 QKLTVVLDLDETLVCAY  109 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s~  109 (285)
                      ..+.++||+||||+++.
T Consensus         4 ~~k~i~fDlDGTL~d~~   20 (240)
T 3qnm_A            4 KYKNLFFDLDDTIWAFS   20 (240)
T ss_dssp             CCSEEEECCBTTTBCHH
T ss_pred             CceEEEEcCCCCCcCch
Confidence            35789999999999863

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=85.61  E-value=0.25  Score=42.99  Aligned_cols=16  Identities=19%  Similarity=0.345  Sum_probs=13.9

Q ss_pred             ceEEEEeCCCcccccc
Q 023259           94 KLTVVLDLDETLVCAY  109 (285)
Q Consensus        94 k~tLVLDLD~TLV~s~  109 (285)
                      .+.++|||||||+++.
T Consensus        35 ik~iifDlDGTLlds~   50 (275)
T 2qlt_A           35 INAALFDVDGTIIISQ   50 (275)
T ss_dssp             ESEEEECCBTTTEECH
T ss_pred             CCEEEECCCCCCCCCH
Confidence            4689999999999864

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=85.58  E-value=0.012  Score=51.00  Aligned_cols=27  Identities=7%  Similarity=-0.214  Sum_probs=20.3

Q ss_pred             eCccHHHHHHHhhhcceEEEEccCchhh
Q 023259          154 ERPGLREFLKQLSEFADLILFTAGLEGY  181 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~yeIvI~Ta~~~~Y  181 (285)
                      ..|++.++|+.|++.+.+ |.|++...+
T Consensus       127 ~~~~~~~~l~~l~~g~~~-i~tn~~~~~  153 (264)
T 1yv9_A          127 SYEKVVLATLAIQKGALF-IGTNPDKNI  153 (264)
T ss_dssp             CHHHHHHHHHHHHTTCEE-EESCCCSEE
T ss_pred             CHHHHHHHHHHHhCCCEE-EEECCCCcc
Confidence            468889999998755776 778876643

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=84.88  E-value=0.38  Score=39.38  Aligned_cols=14  Identities=36%  Similarity=0.339  Sum_probs=12.3

Q ss_pred             ceEEEEeCCCcccc
Q 023259           94 KLTVVLDLDETLVC  107 (285)
Q Consensus        94 k~tLVLDLD~TLV~  107 (285)
                      .+.++||+||||++
T Consensus         2 ~k~viFD~DGTL~d   15 (206)
T 1rku_A            2 MEIACLDLEGVLVP   15 (206)
T ss_dssp             CEEEEEESBTTTBC
T ss_pred             CcEEEEccCCcchh
Confidence            35799999999997

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=84.63  E-value=0.31  Score=42.86  Aligned_cols=15  Identities=27%  Similarity=0.286  Sum_probs=13.5

Q ss_pred             ceEEEEeCCCccccc
Q 023259           94 KLTVVLDLDETLVCA  108 (285)
Q Consensus        94 k~tLVLDLD~TLV~s  108 (285)
                      -+.++|||||||+++
T Consensus        31 ikaviFDlDGTLvDs   45 (253)
T 2g80_A           31 YSTYLLDIEGTVCPI   45 (253)
T ss_dssp             CSEEEECCBTTTBCT
T ss_pred             CcEEEEcCCCCcccc
Confidence            468999999999996

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=84.45  E-value=0.37  Score=40.91  Aligned_cols=15  Identities=27%  Similarity=0.403  Sum_probs=13.0

Q ss_pred             ceEEEEeCCCccccc
Q 023259           94 KLTVVLDLDETLVCA  108 (285)
Q Consensus        94 k~tLVLDLD~TLV~s  108 (285)
                      ++.+|||+||||+++
T Consensus         6 ~k~viFD~DGTL~d~   20 (236)
T 2fea_A            6 KPFIICDFDGTITMN   20 (236)
T ss_dssp             CEEEEECCTTTTBSS
T ss_pred             CcEEEEeCCCCCCcc
Confidence            568999999999964

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=82.17  E-value=0.42  Score=41.19  Aligned_cols=15  Identities=20%  Similarity=0.233  Sum_probs=13.0

Q ss_pred             eEEEEeCCCcccccc
Q 023259           95 LTVVLDLDETLVCAY  109 (285)
Q Consensus        95 ~tLVLDLD~TLV~s~  109 (285)
                      +.++||+||||+++.
T Consensus         2 k~iiFDlDGTL~d~~   16 (263)
T 3k1z_A            2 RLLTWDVKDTLLRLR   16 (263)
T ss_dssp             CEEEECCBTTTEEES
T ss_pred             cEEEEcCCCceeCCC
Confidence            579999999999853

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=81.30  E-value=0.47  Score=41.45  Aligned_cols=15  Identities=20%  Similarity=0.282  Sum_probs=13.5

Q ss_pred             ceEEEEeCCCccccc
Q 023259           94 KLTVVLDLDETLVCA  108 (285)
Q Consensus        94 k~tLVLDLD~TLV~s  108 (285)
                      .+.++|||||||+++
T Consensus        10 ikaviFDlDGTL~ds   24 (261)
T 1yns_A           10 VTVILLDIEGTTTPI   24 (261)
T ss_dssp             CCEEEECCBTTTBCH
T ss_pred             CCEEEEecCCCccch
Confidence            578999999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	285
d1ta0a_	181	c.108.1.16 (A:) Carboxy-terminal domain RNA polyme	5e-33

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 181

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 5e-33
 Identities = 57/193 (29%), Positives = 82/193 (42%), Gaps = 35/193 (18%)

Query: 87  VSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPK 146
              +   K+ VV+DLDETLV    +S  PV   +      +     +             
Sbjct: 8   AKAQDSDKICVVIDLDETLVH---SSFKPVNNADFIIPVEIDGVVHQVY----------- 53

Query: 147 INHVTVFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS 206
                V +RP + EFL+++ E  + +LFTA L  YA P+ D +D    F  RL+R S   
Sbjct: 54  -----VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVF 108

Query: 207 TEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDN--------- 257
                +VKDLS L +DL R LI+DN+P S++  P N +P   +      D          
Sbjct: 109 HR-GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWF-DNMSDTELHDLLPFF 166

Query: 258 -----QKDVRPEL 265
                  DV   L
Sbjct: 167 EQLSRVDDVYSVL 179

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	285
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	100.0
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.18
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	98.98
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	98.97
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	98.93
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	98.92
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	98.88
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.73
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	98.67
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	98.64
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	98.62
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	98.56
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	98.52
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	98.37
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.37
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	98.35
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	98.25
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	98.24
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	98.24
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	98.19
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	98.06
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	97.95
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	97.8
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	97.67
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	97.64
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	97.63
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	97.47
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	97.41
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	96.98
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	96.98
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	96.7
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	96.49
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	96.45
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	96.33
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	96.17
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	96.12
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	96.06
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	95.92
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	95.78
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	95.69
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	95.64
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	95.62
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	95.2
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	94.89
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	94.85
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	94.81
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	94.32
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	93.72
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	93.54
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	92.17
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	91.47
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	89.78
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	84.58
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	83.62
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	82.81
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	81.66
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	80.59
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	80.14

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-39  Score=279.61  Aligned_cols=157  Identities=36%  Similarity=0.528  Sum_probs=131.6

Q ss_pred             ccCCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhcc
Q 023259           90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFA  169 (285)
Q Consensus        90 ~~~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~y  169 (285)
                      ...+|++||||||||||||.....-   ..         .|.+..     ..  ......+||++|||+++||++|+++|
T Consensus        11 ~~~~k~~LVLDLDeTLihs~~~~~~---~~---------~~~~~~-----~~--~~~~~~~~v~~RP~l~eFL~~l~~~y   71 (181)
T d1ta0a_          11 QDSDKICVVIDLDETLVHSSFKPVN---NA---------DFIIPV-----EI--DGVVHQVYVLKRPHVDEFLQRMGELF   71 (181)
T ss_dssp             GGTTSCEEEECCBTTTEEEESSCCT---TC---------SEEEEE-----EE--TTEEEEEEEEECTTHHHHHHHHHHHS
T ss_pred             ccCCCeEEEEeCCCCEEccccCCCC---Cc---------cceeee-----cc--cceeeeeEEecCCCHHHHHHHHHhce
Confidence            3468999999999999998643210   00         011110     01  11234678999999999999999999


Q ss_pred             eEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEECCcccccCCCCCeeeeCcc
Q 023259          170 DLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       170 eIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~~F  249 (285)
                      ||+|||||+++||++|++.|||.+.|.++++|++|... .+.++|||+++|+++++||||||++.+|..||+|||+|++|
T Consensus        72 ei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~c~~~-~~~~~KdL~~l~~~l~~vvivDd~~~~~~~~~~N~I~I~~f  150 (181)
T d1ta0a_          72 ECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFH-RGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASW  150 (181)
T ss_dssp             EEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGGSEEE-TTEEECCGGGSCSCGGGEEEECSCGGGGTTCGGGBCCCCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHhccCCceeEEEEeeeeeec-CCcccccHhhcCCCHHHeEEEcCChhhhhcCccCeeEecCc
Confidence            99999999999999999999999999999999999876 36899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCc--------------cCcHHHHHh
Q 023259          250 SAGQPHDNQ--------------KDVRPELYE  267 (285)
Q Consensus       250 ~~g~~~D~~--------------~DVR~vL~~  267 (285)
                      . |+++|++              +|||++|++
T Consensus       151 ~-~~~~D~eL~~l~~~L~~l~~~~DVR~~l~~  181 (181)
T d1ta0a_         151 F-DNMSDTELHDLLPFFEQLSRVDDVYSVLRQ  181 (181)
T ss_dssp             S-SCTTCCHHHHHHHHHHHHTTCSCHHHHHCC
T ss_pred             C-CCCCcHHHHHHHHHHHHHccCCcHHHHhcC
Confidence            7 7788987              888888864

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.18  E-value=5.5e-12  Score=103.52  Aligned_cols=96  Identities=15%  Similarity=0.153  Sum_probs=76.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCc-hhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGL-EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~-~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +.+.||+.++|+.|++. +.++|.|++. ..+++.+++.+....+|..+.....   .+...+.+-++.+|.+++++|+|
T Consensus        45 ~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~~k---p~~~~~~~~~~~~~~~~~~~l~i  121 (164)
T d1u7pa_          45 IQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPG---SKVTHFERLHHKTGVPFSQMVFF  121 (164)
T ss_dssp             ECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEESSS---CHHHHHHHHHHHHCCCGGGEEEE
T ss_pred             cccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeecccC---CChHHHHHHHHHhCCChHHEEEE
Confidence            77899999999999988 9999999765 5788888998888877776644322   12235677788899999999999


Q ss_pred             ECCcccccCCCCCeeeeCccC
Q 023259          230 DNNPFSFLLQPLNGIPCIPFS  250 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I~~F~  250 (285)
                      ||++.........|+.+--..
T Consensus       122 gD~~~di~aA~~aG~~~i~v~  142 (164)
T d1u7pa_         122 DDENRNIIDVGRLGVTCIHIR  142 (164)
T ss_dssp             ESCHHHHHHHHTTTCEEEECS
T ss_pred             cCCHHHHHHHHHcCCEEEEEC
Confidence            999999888788888665443

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.98  E-value=5.2e-11  Score=99.16  Aligned_cols=94  Identities=18%  Similarity=0.147  Sum_probs=78.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +.+.||+.++|+.|++. +.++|.|++.. .+..++++++..++|..++..+.....|+.  .+..-++.+|.+++++++
T Consensus        81 ~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~  159 (204)
T d2go7a1          81 VVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYY  159 (204)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CcccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccccccchhHHHHHHHHHHhCCCCceEEE
Confidence            56789999999999988 99999998765 678899999999999999887766554433  567778889999999999


Q ss_pred             EECCcccccCCCCCeeee
Q 023259          229 VDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I  246 (285)
                      |+|++.........|+..
T Consensus       160 VgD~~~Di~~A~~~G~~~  177 (204)
T d2go7a1         160 IGDRTLDVEFAQNSGIQS  177 (204)
T ss_dssp             EESSHHHHHHHHHHTCEE
T ss_pred             EeCCHHHHHHHHHcCCeE
Confidence            999998777666666654

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=98.97  E-value=9.3e-11  Score=98.21  Aligned_cols=97  Identities=12%  Similarity=0.019  Sum_probs=82.9

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +...||+.++|+.|++. +.++|.|++...+++.+++.++..++|..+++.++....|..  .|.+-++.+|.+++++++
T Consensus        87 ~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  166 (218)
T d1te2a_          87 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVA  166 (218)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred             ccccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHcCCCchhcEE
Confidence            34679999999999977 999999999999999999999999999999998876555443  578888999999999999


Q ss_pred             EECCcccccCCCCCeeeeCc
Q 023259          229 VDNNPFSFLLQPLNGIPCIP  248 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~~  248 (285)
                      |+|++.........|+.+--
T Consensus       167 igD~~~di~aA~~~G~~~i~  186 (218)
T d1te2a_         167 LEDSVNGMIASKAARMRSIV  186 (218)
T ss_dssp             EESSHHHHHHHHHTTCEEEE
T ss_pred             EeeCHHHHHHHHHcCCEEEE
Confidence            99999877766667765543

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=98.93  E-value=1.7e-10  Score=96.34  Aligned_cols=94  Identities=10%  Similarity=0.025  Sum_probs=80.9

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      +...||+.++|+.|++.+.++|.|++....++.++++++...+|..++..+.+...|+.  .+.+-++++|.+++++|+|
T Consensus        81 ~~~~~g~~~~L~~l~~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~V  160 (207)
T d2hdoa1          81 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFI  160 (207)
T ss_dssp             CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred             cccccchhhhhhhhcccccccccccccccccccccccccccccccccccccccccchhhhhhhcccccceeeeccceeEe
Confidence            56789999999999988999999999999999999999998999999988876655433  5778888899999999999


Q ss_pred             ECCcccccCCCCCeee
Q 023259          230 DNNPFSFLLQPLNGIP  245 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~  245 (285)
                      +|++.-.......|+.
T Consensus       161 gDs~~Di~~a~~aG~~  176 (207)
T d2hdoa1         161 GDSVSDEQTAQAANVD  176 (207)
T ss_dssp             ESSHHHHHHHHHHTCE
T ss_pred             cCCHHHHHHHHHcCCe
Confidence            9999877766666665

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.92  E-value=6.3e-11  Score=98.69  Aligned_cols=94  Identities=15%  Similarity=0.139  Sum_probs=80.8

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCccccccccccCCCCCcEEEEEC
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDD  231 (285)
                      ....||+.++|+.+++.+.++|.|++...+++.+++.++...+|..++..+.....+...+.+.++++|.+++++|+|.|
T Consensus        83 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGD  162 (210)
T d2ah5a1          83 AQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGD  162 (210)
T ss_dssp             CEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEES
T ss_pred             ccchhHHHHHHhhhhcccchhhcccccchhhhHHHHhhcccccccccccccccccccccccchhhhhhhcccccceeecC
Confidence            56799999999999999999999999999999999999999999998887765444444677788889999999999999


Q ss_pred             CcccccCCCCCeee
Q 023259          232 NPFSFLLQPLNGIP  245 (285)
Q Consensus       232 s~~~~~~~p~NgI~  245 (285)
                      +..-.......|+.
T Consensus       163 s~~Di~aa~~aGi~  176 (210)
T d2ah5a1         163 TKFDMLGARETGIQ  176 (210)
T ss_dssp             SHHHHHHHHHHTCE
T ss_pred             CHHHHHHHHHcCCe
Confidence            98877766666664

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=98.88  E-value=1.9e-10  Score=95.86  Aligned_cols=93  Identities=16%  Similarity=0.076  Sum_probs=79.6

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      ....||+.++|++|++. +.++|.|++...+++.+++.++..++|..+++.+.....+..  .+..-++.++.+.+++|+
T Consensus        94 ~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~  173 (224)
T d2hsza1          94 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILF  173 (224)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             cchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccccccccchhhHHHHHHhhhhhhccch
Confidence            56789999999999988 999999999999999999999999999999988776554432  567788889999999999


Q ss_pred             EECCcccccCCCCCee
Q 023259          229 VDNNPFSFLLQPLNGI  244 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI  244 (285)
                      |+|++.........|+
T Consensus       174 igD~~~Di~~A~~aG~  189 (224)
T d2hsza1         174 VGDSQNDIFAAHSAGC  189 (224)
T ss_dssp             EESSHHHHHHHHHHTC
T ss_pred             hcCcHHHHHHHHHcCC
Confidence            9999987766555554

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.73  E-value=1.5e-09  Score=86.28  Aligned_cols=128  Identities=13%  Similarity=0.085  Sum_probs=79.6

Q ss_pred             CCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-ce
Q 023259           92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-AD  170 (285)
Q Consensus        92 ~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-ye  170 (285)
                      .+++++|||+||||+++.+...                |....    .          .-....||+.++|+.+++. |+
T Consensus         5 ~kpk~vifDiDgTL~~~~~~~~----------------~~~~~----~----------~~~~~~p~v~~~l~~l~~~G~~   54 (149)
T d1ltqa1           5 GKPKAVIFDVDGTLAKMNGRGP----------------YDLEK----C----------DTDVINPMVVELSKMYALMGYQ   54 (149)
T ss_dssp             TSCEEEEEETBTTTBCCSSCCT----------------TCGGG----G----------GGCCBCHHHHHHHHHHHHTTCE
T ss_pred             CCCcEEEEEcCCCcEeCCCCCc----------------CCccc----c----------ccCccCHHHHHHHHHHHhccCe
Confidence            4778999999999998643211                10000    0          0023579999999999987 99


Q ss_pred             EEEEccCchhhHHHHHHHhcC--------CC-ceeEEEecCcccccCCcccc-ccccccCCCCCcE-EEEECCcccccCC
Q 023259          171 LILFTAGLEGYARPLVDRIDG--------EN-LFSLRLYRPSTTSTEYREHV-KDLSCLSKDLCRT-LIVDNNPFSFLLQ  239 (285)
Q Consensus       171 IvI~Ta~~~~YA~~Vl~~LDp--------~~-~f~~~l~r~~c~~~k~~~~~-KdL~~Lgrdl~~v-VIVDDs~~~~~~~  239 (285)
                      |++.|+-...+.+..++.|..        .+ .+.....+..+...++.... .-|..+..+..++ ++|||++......
T Consensus        55 Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~  134 (149)
T d1ltqa1          55 IVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMW  134 (149)
T ss_dssp             EEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHH
T ss_pred             EEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHH
Confidence            999999887766555554432        11 23334444443322222221 2233445555665 4579999999888


Q ss_pred             CCCeeeeCcc
Q 023259          240 PLNGIPCIPF  249 (285)
Q Consensus       240 p~NgI~I~~F  249 (285)
                      ..+||++-.-
T Consensus       135 ~~~Gi~~~~V  144 (149)
T d1ltqa1         135 RRIGVECWQV  144 (149)
T ss_dssp             HHTTCCEEEC
T ss_pred             HHCCCcEEEe
Confidence            8899887544

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=98.67  E-value=2.9e-09  Score=89.72  Aligned_cols=95  Identities=14%  Similarity=0.133  Sum_probs=75.2

Q ss_pred             EeeCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--ccc---ccccccCCCCC
Q 023259          152 VFERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHV---KDLSCLSKDLC  224 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~--yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~---KdL~~Lgrdl~  224 (285)
                      +..-||+.++|+.|++.  +.++|.|++....+..+++.++...+|+..++.++....+..  .+.   +.+...+.+++
T Consensus        90 ~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~  169 (228)
T d2hcfa1          90 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPS  169 (228)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGG
T ss_pred             ceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccccchhHHHHHHhhhhcccCCChh
Confidence            45679999999999875  789999999999999999999999999999888765443332  222   23333477889


Q ss_pred             cEEEEECCcccccCCCCCeeee
Q 023259          225 RTLIVDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       225 ~vVIVDDs~~~~~~~p~NgI~I  246 (285)
                      ++|.|.|++.-......+|+..
T Consensus       170 ~~l~VGD~~~Di~aA~~aG~~~  191 (228)
T d2hcfa1         170 QIVIIGDTEHDIRCARELDARS  191 (228)
T ss_dssp             GEEEEESSHHHHHHHHTTTCEE
T ss_pred             HheeecCChHHHHHHHHcCCEE
Confidence            9999999998877777777653

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=98.64  E-value=6.1e-09  Score=86.60  Aligned_cols=94  Identities=15%  Similarity=0.093  Sum_probs=81.6

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      ....|++.++|+.+.+. +.+++.|++...+++.+++......+|..+++.+++...|..  .|.+-++++|.+++++++
T Consensus        92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l~  171 (220)
T d1zrna_          92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF  171 (220)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred             ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceEEE
Confidence            45789999999999876 999999999999999999999999999999999888776654  678889999999999999


Q ss_pred             EECCcccccCCCCCeee
Q 023259          229 VDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~  245 (285)
                      |+|++.........|+.
T Consensus       172 VgD~~~Di~~A~~aG~~  188 (220)
T d1zrna_         172 VASNAWDATGARYFGFP  188 (220)
T ss_dssp             EESCHHHHHHHHHHTCC
T ss_pred             EecChHhHHHHHHcCCE
Confidence            99999766655555654

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.62  E-value=8.7e-09  Score=84.82  Aligned_cols=96  Identities=10%  Similarity=0.123  Sum_probs=75.2

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      ....||+.++|+.+++. +.++|.|++.. .+..+++.++..++|+.++..++....|..  .|..-++.++.  +.+|+
T Consensus        78 ~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~-~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~~l~  154 (187)
T d2fi1a1          78 PILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--SSGLV  154 (187)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--SSEEE
T ss_pred             CcccchhHHHHHHHHhhhccccccccCcc-chhhhhhhhccccccccccccccccccCCCHHHHHHHHHHcCC--CCeEE
Confidence            45679999999999988 99999998765 555689999999999999887765544433  45555666664  67999


Q ss_pred             EECCcccccCCCCCeeeeCccC
Q 023259          229 VDNNPFSFLLQPLNGIPCIPFS  250 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~I~~F~  250 (285)
                      |+|++.........|+.+--+.
T Consensus       155 vgDs~~Di~aA~~aG~~~i~v~  176 (187)
T d2fi1a1         155 IGDRPIDIEAGQAAGLDTHLFT  176 (187)
T ss_dssp             EESSHHHHHHHHHTTCEEEECS
T ss_pred             EeCCHHHHHHHHHcCCEEEEEC
Confidence            9999988877778888765554

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=98.56  E-value=9.4e-09  Score=85.79  Aligned_cols=92  Identities=12%  Similarity=0.121  Sum_probs=75.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI  228 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVI  228 (285)
                      +..-||+.++|+.|++. +.+++.|++  ..+..+++.++..++|..+++.+.....|+.  .+.+-++.+|.+++++|+
T Consensus        90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~--~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l~  167 (221)
T d1o08a_          90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIG  167 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred             ccccCCceeccccccccccceEEEeec--chhhHHHHhhccccccccccccccccccccChHHHHHHHHHcCCCCceEEE
Confidence            45679999999999977 888888875  5688999999999999999998876655543  578899999999999999


Q ss_pred             EECCcccccCCCCCeee
Q 023259          229 VDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       229 VDDs~~~~~~~p~NgI~  245 (285)
                      |+|++.........|+.
T Consensus       168 VgD~~~di~~A~~aG~~  184 (221)
T d1o08a_         168 LEDSQAGIQAIKDSGAL  184 (221)
T ss_dssp             EESSHHHHHHHHHHTCE
T ss_pred             EecCHHHHHHHHHcCCE
Confidence            99999776655555553

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.52  E-value=2.3e-08  Score=82.91  Aligned_cols=96  Identities=8%  Similarity=-0.112  Sum_probs=77.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccC----chhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCC
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAG----LEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLC  224 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~----~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~  224 (285)
                      ...+||+.++|++|++. +.++|.|++    ...+.+.++...+..++|+.+++.+.+...|..  .|.+-++.++.+++
T Consensus        96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p~  175 (222)
T d1cr6a1          96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPN  175 (222)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCTT
T ss_pred             CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCCcc
Confidence            46799999999999987 999999974    444666667777888899999998877665544  67888999999999


Q ss_pred             cEEEEECCcccccCCCCCeeeeC
Q 023259          225 RTLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       225 ~vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      ++|+|+|+..........|+..-
T Consensus       176 ~~l~IgD~~~Di~~A~~aG~~ti  198 (222)
T d1cr6a1         176 EVVFLDDFGSNLKPARDMGMVTI  198 (222)
T ss_dssp             SEEEEESSSTTTHHHHHHTCEEE
T ss_pred             eEEEEECCHHHHHHHHHcCCEEE
Confidence            99999999887766666776533

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=98.37  E-value=9.6e-08  Score=80.24  Aligned_cols=94  Identities=14%  Similarity=0.097  Sum_probs=80.3

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      ...-|++.+.|+.+.. +.+++.|++...++..+++.++...+|+.+++.++....|..  .|.+-++++|.+++++|+|
T Consensus        92 ~~~~~~~~~~L~~l~~-~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~V  170 (245)
T d1qq5a_          92 LTPYPDAAQCLAELAP-LKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFV  170 (245)
T ss_dssp             CCBCTTHHHHHHHHTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEE
T ss_pred             cccchhhhHHHHHHhh-hceeEEeccchHHHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhCCChhhEEEE
Confidence            4567999999999864 678999999999999999999998999999998887766654  6889999999999999999


Q ss_pred             ECCcccccCCCCCeeee
Q 023259          230 DNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       230 DDs~~~~~~~p~NgI~I  246 (285)
                      +|++.........|+..
T Consensus       171 gD~~~di~~A~~aG~~t  187 (245)
T d1qq5a_         171 SSNGFDVGGAKNFGFSV  187 (245)
T ss_dssp             ESCHHHHHHHHHHTCEE
T ss_pred             eCCHHHHHHHHHcCCeE
Confidence            99998777677777643

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=98.37  E-value=4.7e-08  Score=81.81  Aligned_cols=126  Identities=15%  Similarity=0.174  Sum_probs=82.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce-eEEEe-cCccc---------c----cCCcccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-SLRLY-RPSTT---------S----TEYREHVKD  215 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f-~~~l~-r~~c~---------~----~k~~~~~Kd  215 (285)
                      +.++||+.++|+.|.+. +.++|.|++...+++.+++.++...+| ...+. .+.-.         .    .+.....+-
T Consensus        74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~  153 (226)
T d2feaa1          74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSV  153 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHH
T ss_pred             cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHHHHH
Confidence            66899999999999877 999999999999999999999876554 22221 11100         0    000012234


Q ss_pred             ccccCCCCCcEEEEECCcccccCCCCCeeeeCccCCC-------C---CCCCccCcHHHHHhhcCChHHHHh
Q 023259          216 LSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAG-------Q---PHDNQKDVRPELYERFHMPEWFQK  277 (285)
Q Consensus       216 L~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~~F~~g-------~---~~D~~~DVR~vL~~~f~~~e~~~~  277 (285)
                      ++.++.+.++++.|-|+..-.......++.+..-..+       .   +.++-.||...|.+...+.||++.
T Consensus       154 ~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~~~~~~~  225 (226)
T d2feaa1         154 IHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN  225 (226)
T ss_dssp             HHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHHHHHHHTC
T ss_pred             HHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHHHHHHHHHHHhhC
Confidence            5667889999999999998877655555543111000       0   001115677777777777788764

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.35  E-value=7.9e-08  Score=80.04  Aligned_cols=99  Identities=11%  Similarity=0.147  Sum_probs=78.6

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCc-c--cccCC--ccccccccccCCCCCcE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPS-T--TSTEY--REHVKDLSCLSKDLCRT  226 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~-c--~~~k~--~~~~KdL~~Lgrdl~~v  226 (285)
                      +...||+.++|+.+..  ..+|.|++...++..++++++..++|...++... .  ...|+  ..|.+-++.+|.+++++
T Consensus        84 ~~~~~g~~~~L~~l~~--~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~~  161 (222)
T d2fdra1          84 VKIIDGVKFALSRLTT--PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRV  161 (222)
T ss_dssp             CCBCTTHHHHHHHCCS--CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             cchhhhHHHHhhhccc--cceeeeecchhhhhhhhcccccccccceeecccccccccccccCHHHHHHHHHhhCCCCceE
Confidence            6678999999999875  5678899999999999999999998876655332 1  11122  36788899999999999


Q ss_pred             EEEECCcccccCCCCCeeeeCccCCC
Q 023259          227 LIVDNNPFSFLLQPLNGIPCIPFSAG  252 (285)
Q Consensus       227 VIVDDs~~~~~~~p~NgI~I~~F~~g  252 (285)
                      |+|+|++.........|+.+--+.++
T Consensus       162 l~vgDs~~dv~aA~~aG~~~i~v~~~  187 (222)
T d2fdra1         162 VVVEDSVHGIHGARAAGMRVIGFTGA  187 (222)
T ss_dssp             EEEESSHHHHHHHHHTTCEEEEECCS
T ss_pred             EEEcCCHHHHHHHHHcCCEEEEEccC
Confidence            99999998888788888876666544

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=6.1e-08  Score=79.43  Aligned_cols=98  Identities=8%  Similarity=-0.116  Sum_probs=76.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHH----HhcCCCceeEEEecCcccccCCc--cccccccccCCCCC
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVD----RIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLC  224 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~----~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~  224 (285)
                      ...+||+.++|..|++. +.++|.|++....+...++    ..+..++|+.+++.+++...|..  .|.+-++.+|.+++
T Consensus        98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~  177 (225)
T d1zd3a1          98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPS  177 (225)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred             CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccCcc
Confidence            56899999999999977 9999999886665544433    34445689999988776665554  67888899999999


Q ss_pred             cEEEEECCcccccCCCCCeeeeCcc
Q 023259          225 RTLIVDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       225 ~vVIVDDs~~~~~~~p~NgI~I~~F  249 (285)
                      ++|+|+|++.........|+..--+
T Consensus       178 e~l~VgD~~~Di~~A~~~G~~ti~v  202 (225)
T d1zd3a1         178 EVVFLDDIGANLKPARDLGMVTILV  202 (225)
T ss_dssp             GEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred             ceeEEecCHHHHHHHHHcCCEEEEE
Confidence            9999999988777777777764444

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=98.24  E-value=1.1e-06  Score=71.76  Aligned_cols=94  Identities=14%  Similarity=0.156  Sum_probs=57.7

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCc----hhh----H----HHHHHHhcCCC-ceeEEEec-----CcccccCC--c
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGL----EGY----A----RPLVDRIDGEN-LFSLRLYR-----PSTTSTEY--R  210 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~----~~Y----A----~~Vl~~LDp~~-~f~~~l~r-----~~c~~~k~--~  210 (285)
                      +.+-||+.+.|+.|++. |.++|.|+.+    ..+    .    ..+.+.+...+ .+..++++     +.|...|.  +
T Consensus        29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~  108 (161)
T d2fpwa1          29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVK  108 (161)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSG
T ss_pred             ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccccccccccccccccH
Confidence            35679999999999987 9999999854    111    1    12223333333 23444444     34443343  3


Q ss_pred             cccccccccCCCCCcEEEEECCcccccCCCCCeee
Q 023259          211 EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       211 ~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~  245 (285)
                      .+.+-++.+|.+++++++|-|+..-.......|+.
T Consensus       109 ~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~  143 (161)
T d2fpwa1         109 LVERYLAEQAMDRANSYVIGDRATDIQLAENMGIN  143 (161)
T ss_dssp             GGGGGC----CCGGGCEEEESSHHHHHHHHHHTSE
T ss_pred             HHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCe
Confidence            67788888999999999999998765544444443

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=98.24  E-value=3e-08  Score=79.33  Aligned_cols=98  Identities=13%  Similarity=0.030  Sum_probs=78.8

Q ss_pred             EEEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh-cCCCceeEEEecCcccccCCc--cccccccccCCCCCc
Q 023259          150 VTVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI-DGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCR  225 (285)
Q Consensus       150 ~~V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~L-Dp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~  225 (285)
                      .....+|++.+++..+.+. +.+++.|++....+...+..+ +...+|..+++.++....|..  .|.+-++.+|.++++
T Consensus        81 ~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~  160 (197)
T d2b0ca1          81 VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD  160 (197)
T ss_dssp             CEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             hccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCe
Confidence            4478899999999999866 999999999888887777765 566789999987766555443  577888889999999


Q ss_pred             EEEEECCcccccCCCCCeeeeC
Q 023259          226 TLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       226 vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      +|+|+|++.........|+..-
T Consensus       161 ~l~vgDs~~di~~A~~aG~~ti  182 (197)
T d2b0ca1         161 TVFFDDNADNIEGANQLGITSI  182 (197)
T ss_dssp             EEEEESCHHHHHHHHTTTCEEE
T ss_pred             EEEEeCCHHHHHHHHHcCCEEE
Confidence            9999999988776677776543

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=98.19  E-value=4.3e-07  Score=76.22  Aligned_cols=95  Identities=16%  Similarity=0.030  Sum_probs=79.9

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      ....||+.++|+.|++.|.++|.|++...+.+.+++.++..++|+.+++.+++...|+.  .|.+-++++|.+++++++|
T Consensus        99 ~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~v  178 (230)
T d1x42a1          99 GELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYV  178 (230)
T ss_dssp             CCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CcccccHHHHHHHhhccCceeeeeccccccchhhhcccccccccccccccccccccchhhHHHHHHHhhhccccccccee
Confidence            55689999999999988999999999999999999999999999999998777665543  5788889999999999999


Q ss_pred             ECCccc-ccCCCCCeeee
Q 023259          230 DNNPFS-FLLQPLNGIPC  246 (285)
Q Consensus       230 DDs~~~-~~~~p~NgI~I  246 (285)
                      +|++.. .......|+..
T Consensus       179 gD~~~~Di~~A~~~G~~~  196 (230)
T d1x42a1         179 GDNPVKDCGGSKNLGMTS  196 (230)
T ss_dssp             ESCTTTTHHHHHTTTCEE
T ss_pred             ecCcHhHHHHHHHcCCEE
Confidence            998754 55444556543

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=98.06  E-value=2.8e-06  Score=72.16  Aligned_cols=92  Identities=15%  Similarity=0.155  Sum_probs=60.9

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCc------------hhhHHHHHHHhcCCCc-eeEEEecC------------cccc
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGL------------EGYARPLVDRIDGENL-FSLRLYRP------------STTS  206 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~------------~~YA~~Vl~~LDp~~~-f~~~l~r~------------~c~~  206 (285)
                      .+-||+.+.|++|++. |.++|.|+..            ....+.+.+.+...+. +...+++.            +|..
T Consensus        48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (209)
T d2o2xa1          48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPM  127 (209)
T ss_dssp             CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTT
T ss_pred             EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEeccccccccccccccccc
Confidence            4679999999999988 9999999843            2233344444544443 34443332            2333


Q ss_pred             cCCc--cccccccccCCCCCcEEEEECCcccccCCCCCee
Q 023259          207 TEYR--EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGI  244 (285)
Q Consensus       207 ~k~~--~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p~NgI  244 (285)
                      .|..  .+.+-++.++.+++++++|-|+..-.......|+
T Consensus       128 rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi  167 (209)
T d2o2xa1         128 RKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGL  167 (209)
T ss_dssp             STTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTC
T ss_pred             ccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCC
Confidence            3332  4667778889999999999999876655544444

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.95  E-value=2.9e-06  Score=71.33  Aligned_cols=94  Identities=12%  Similarity=0.093  Sum_probs=79.9

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCCc--cccccccccCCCCCcEEEE
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV  229 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgrdl~~vVIV  229 (285)
                      ....||+.++|+.|++.+.++|.|++.....+.+++..+...+|+.+++.+++...|+.  .|.+-++++|.+++++++|
T Consensus       108 ~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l~i  187 (247)
T d2gfha1         108 MILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMV  187 (247)
T ss_dssp             CCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CccCccHHHHHHHhhcccceEEeecccchhhhhhhhhccccccccccccccccccchhhhhhHHHHHHHhhcCHHhccee
Confidence            34679999999999999999999999999999999999998899999998887766643  5778888999999999999


Q ss_pred             ECCccc-ccCCCCCeee
Q 023259          230 DNNPFS-FLLQPLNGIP  245 (285)
Q Consensus       230 DDs~~~-~~~~p~NgI~  245 (285)
                      .|+... .......|+.
T Consensus       188 GD~~~~Di~~A~~~G~~  204 (247)
T d2gfha1         188 GDTLETDIQGGLNAGLK  204 (247)
T ss_dssp             ESCTTTHHHHHHHTTCS
T ss_pred             ccChHhHHHHHHHcCCe
Confidence            999754 6555566764

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=1.1e-05  Score=67.85  Aligned_cols=96  Identities=16%  Similarity=0.221  Sum_probs=66.8

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC--ceeEEEe-cCcccc----------cCCc--ccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN--LFSLRLY-RPSTTS----------TEYR--EHVKD  215 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~--~f~~~l~-r~~c~~----------~k~~--~~~Kd  215 (285)
                      +.++||+.+++++|++. +.++|-|++...+++++++.++...  .+...+- ..+...          ...+  ..++-
T Consensus        81 ~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~  160 (217)
T d1nnla_          81 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKL  160 (217)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHH
T ss_pred             cccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHHH
Confidence            56889999999999988 9999999999999999999998653  3332221 111000          0000  11111


Q ss_pred             ccccCCCCCcEEEEECCcccccCCCCCeeeeCcc
Q 023259          216 LSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPF  249 (285)
Q Consensus       216 L~~Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~~F  249 (285)
                      + +-+.++++++.|-|+..-.......|+.| .|
T Consensus       161 ~-~~~~~~~~~~~vGDs~~Di~~~~~ag~~v-a~  192 (217)
T d1nnla_         161 L-KEKFHFKKIIMIGDGATDMEACPPADAFI-GF  192 (217)
T ss_dssp             H-HHHHCCSCEEEEESSHHHHTTTTTSSEEE-EE
T ss_pred             H-HhccCccccEEEEeCHhhHHHHHhCCceE-EE
Confidence            1 11347789999999999998888888875 45

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=2.6e-05  Score=63.78  Aligned_cols=87  Identities=11%  Similarity=0.113  Sum_probs=56.3

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCch--------hhHHHHHHHh----cCC-CceeEEEecC------------ccccc
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLE--------GYARPLVDRI----DGE-NLFSLRLYRP------------STTST  207 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~--------~YA~~Vl~~L----Dp~-~~f~~~l~r~------------~c~~~  207 (285)
                      +=||+.+.|+.|++. |.++|.|+...        .....+...+    ... ..+....++.            .|...
T Consensus        28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~r  107 (182)
T d2gmwa1          28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCR  107 (182)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSSS
T ss_pred             ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeeccccccccccccccccccc
Confidence            459999999999987 99999998753        1222222211    111 1233444433            34433


Q ss_pred             CCc--cccccccccCCCCCcEEEEECCcccccCCC
Q 023259          208 EYR--EHVKDLSCLSKDLCRTLIVDNNPFSFLLQP  240 (285)
Q Consensus       208 k~~--~~~KdL~~Lgrdl~~vVIVDDs~~~~~~~p  240 (285)
                      |..  ...+-++.++.+++++++|=|+..-.....
T Consensus       108 KP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~  142 (182)
T d2gmwa1         108 KPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAV  142 (182)
T ss_dssp             TTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHH
T ss_pred             CCccccccchhhhcccccccccccCCCHHHHHHHH
Confidence            432  566778888999999999999987665443

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=97.64  E-value=4.6e-06  Score=70.71  Aligned_cols=95  Identities=9%  Similarity=-0.035  Sum_probs=79.5

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce-eEEEecCcccccCCc--cccccccccCC-CCCcE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-SLRLYRPSTTSTEYR--EHVKDLSCLSK-DLCRT  226 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f-~~~l~r~~c~~~k~~--~~~KdL~~Lgr-dl~~v  226 (285)
                      +...||+.++|+.|++. +.++|.|++...+++.+++.++..++| +.+++.+++...|..  .|.+-++++|. +.+++
T Consensus        98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~  177 (257)
T d1swva_          98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHM  177 (257)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGE
T ss_pred             CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccccccChHHHHHHHHHhCCCCcceE
Confidence            45789999999999988 999999999999999999999988876 566777776655543  68899999997 56999


Q ss_pred             EEEECCcccccCCCCCeeee
Q 023259          227 LIVDNNPFSFLLQPLNGIPC  246 (285)
Q Consensus       227 VIVDDs~~~~~~~p~NgI~I  246 (285)
                      |+|+|+..........|+.+
T Consensus       178 v~VgDs~~Di~aA~~aG~~t  197 (257)
T d1swva_         178 IKVGDTVSDMKEGRNAGMWT  197 (257)
T ss_dssp             EEEESSHHHHHHHHHTTSEE
T ss_pred             EEEeCChhhHHHHHHCCCEE
Confidence            99999998877766666643

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.63  E-value=0.00012  Score=56.93  Aligned_cols=74  Identities=23%  Similarity=0.220  Sum_probs=48.7

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc-eeEEEecCcccccCCccccccccccCCCCCcEEEEEC
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL-FSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN  231 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~-f~~~l~r~~c~~~k~~~~~KdL~~Lgrdl~~vVIVDD  231 (285)
                      -.|++.++|+.|.+. ++|+|||+-...+.....+.|...+. |........       ...+.=+...+.+.--++|||
T Consensus        22 Pi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~yd~i~~~~~-------~~~~~~~~~~~Kp~ad~yIDD   94 (122)
T d2obba1          22 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANKDYP-------EEERDHQGFSRKLKADLFIDD   94 (122)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESSSST-------TC---CCSCCSSCCCSEEECT
T ss_pred             ccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCCceehhccCc-------cCccccceecCCccccEEEeC
Confidence            368999999999977 99999999999998888888887763 333322111       111111222333444589999


Q ss_pred             Ccc
Q 023259          232 NPF  234 (285)
Q Consensus       232 s~~  234 (285)
                      ...
T Consensus        95 Kai   97 (122)
T d2obba1          95 RNV   97 (122)
T ss_dssp             TST
T ss_pred             Ccc
Confidence            764

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.47  E-value=3.8e-05  Score=61.69  Aligned_cols=96  Identities=15%  Similarity=0.114  Sum_probs=69.1

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEecCcccccCC-------c-----cccccccc
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY-------R-----EHVKDLSC  218 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~r~~c~~~k~-------~-----~~~KdL~~  218 (285)
                      ....+|+.++++.+... +.+++.|++...++....+......++...+..+.......       +     ...+-+..
T Consensus        74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (210)
T d1j97a_          74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKI  153 (210)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccccccccccccccccccccccchhhhHHHH
Confidence            56789999999999988 99999999999999999999988877666555444221100       0     11223334


Q ss_pred             cCCCCCcEEEEECCcccccCCCCCeeeeC
Q 023259          219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       219 Lgrdl~~vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      ++.+++++|.|-|+..-......-|+.|-
T Consensus       154 ~~~~~~~~i~iGDs~nDi~m~~~ag~~va  182 (210)
T d1j97a_         154 EGINLEDTVAVGDGANDISMFKKAGLKIA  182 (210)
T ss_dssp             HTCCGGGEEEEESSGGGHHHHHHCSEEEE
T ss_pred             hcccccceEEecCCcChHHHHHHCCCCEE
Confidence            57788999999999977655554555543

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=1.9e-05  Score=64.98  Aligned_cols=94  Identities=6%  Similarity=-0.015  Sum_probs=74.6

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEE-ecCcccccCCc--cccccccccCCCCCcEE
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRL-YRPSTTSTEYR--EHVKDLSCLSKDLCRTL  227 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l-~r~~c~~~k~~--~~~KdL~~Lgrdl~~vV  227 (285)
                      ...+||+.++|++|++. +.++|.|++.....+.+++.++...++.... ..+.....|..  .|..-++++|.++++++
T Consensus       126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~~l  205 (253)
T d1zs9a1         126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNIL  205 (253)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGEE
T ss_pred             cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCcCcEE
Confidence            45689999999999877 9999999999999999999888776655332 22333333433  68889999999999999


Q ss_pred             EEECCcccccCCCCCeee
Q 023259          228 IVDNNPFSFLLQPLNGIP  245 (285)
Q Consensus       228 IVDDs~~~~~~~p~NgI~  245 (285)
                      +|+|+..........|+.
T Consensus       206 ~vgD~~~dv~aA~~aG~~  223 (253)
T d1zs9a1         206 FLTDVTREASAAEEADVH  223 (253)
T ss_dssp             EEESCHHHHHHHHHTTCE
T ss_pred             EEeCCHHHHHHHHHcCCE
Confidence            999999877666667764

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.98  E-value=0.001  Score=55.52  Aligned_cols=110  Identities=14%  Similarity=0.174  Sum_probs=64.3

Q ss_pred             CCceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhc-ce
Q 023259           92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-AD  170 (285)
Q Consensus        92 ~~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~-ye  170 (285)
                      ..++.++||+||||+........+.         +                    ..+ +..+.|++.+.|+.|.+. |.
T Consensus        19 ~~~Kia~fDrDGtLik~~~~~~~~~---------~--------------------~~d-~~~l~~~v~~~i~~L~~~gy~   68 (195)
T d1yj5a1          19 PQGKVAAFDLDGTLITTRSGKVFPT---------S--------------------PSD-WRILYPEIPKKLQELAAEGYK   68 (195)
T ss_dssp             CCSCEEEECSBTTTEECSSSCSSCS---------S--------------------TTC-CEESCTTHHHHHHHHHHHTCE
T ss_pred             CcCcEEEEECCCceEeeCCCCcCCC---------C--------------------hhh-ceeccCCHHHHHHHHHhCCcE
Confidence            4678999999999997421100000         0                    001 245689999999999977 99


Q ss_pred             EEEEccCc--------hhh----HHHHHHHhcCCCceeEEEecCcccccCCc--cccccccc----cCCCCCcEEEEECC
Q 023259          171 LILFTAGL--------EGY----ARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSC----LSKDLCRTLIVDNN  232 (285)
Q Consensus       171 IvI~Ta~~--------~~Y----A~~Vl~~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~----Lgrdl~~vVIVDDs  232 (285)
                      ++|.|+..        .+-    -+.+++.++..  +...+...+|...|..  .+.+-++.    ++.|+++.++|=|.
T Consensus        69 iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~~i~~~~~~~~~RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~  146 (195)
T d1yj5a1          69 LVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDA  146 (195)
T ss_dssp             EEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSSSSTTSTHHHHHHHHTSSSSCCCCGGGCEEECSC
T ss_pred             EEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--ccEEEecCccccCCCccHHHHHHHHHhcccccCCcCceEEEeCc
Confidence            99999853        222    23444444432  2222223345444443  33232333    24678888999886


Q ss_pred             c
Q 023259          233 P  233 (285)
Q Consensus       233 ~  233 (285)
                      .
T Consensus       147 ~  147 (195)
T d1yj5a1         147 A  147 (195)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.00044  Score=56.30  Aligned_cols=53  Identities=13%  Similarity=0.158  Sum_probs=35.6

Q ss_pred             CceEEEEeCCCcccccccCCCCchhhcccccccCccceeeccccCCccCCCCcccceEEEeeCccHHHHHHHhhhcceEE
Q 023259           93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLI  172 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s~~~s~lp~~~~~~~~~~~~~~F~l~~~~~~~~~~g~~~~~~~~V~~RPgl~eFL~~ls~~yeIv  172 (285)
                      ++++++|||||||+++.+.                                          .-|...+.|+++.+...++
T Consensus         2 ~~kl~~fDlDGTLl~~~~~------------------------------------------i~~~~~~al~~l~~~g~~~   39 (243)
T d2amya1           2 GPALCLFDVDGTLTAPRQK------------------------------------------ITKEMDDFLQKLRQKIKIG   39 (243)
T ss_dssp             CSEEEEEESBTTTBCTTSC------------------------------------------CCHHHHHHHHHHTTTSEEE
T ss_pred             CCEEEEEcCcCCeeCCCCc------------------------------------------CCHHHHHHHHHHHcCCCEE
Confidence            6889999999999974210                                          2345667778887776677


Q ss_pred             EEccCchhhHHHHHH
Q 023259          173 LFTAGLEGYARPLVD  187 (285)
Q Consensus       173 I~Ta~~~~YA~~Vl~  187 (285)
                      +-|.+....+...+.
T Consensus        40 i~Tgr~~~~~~~~~~   54 (243)
T d2amya1          40 VVGGSDFEKVQEQLG   54 (243)
T ss_dssp             EECSSCHHHHHHHHC
T ss_pred             EEcCCChHHhHHHHh
Confidence            766665554444433

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=96.70  E-value=0.001  Score=51.76  Aligned_cols=41  Identities=15%  Similarity=0.199  Sum_probs=31.8

Q ss_pred             eeCccHHHHHHHhhhc-ceEEEEccCc------------hhhHHHHHHHhcCCC
Q 023259          153 FERPGLREFLKQLSEF-ADLILFTAGL------------EGYARPLVDRIDGEN  193 (285)
Q Consensus       153 ~~RPgl~eFL~~ls~~-yeIvI~Ta~~------------~~YA~~Vl~~LDp~~  193 (285)
                      ...|++.++|..+.+. +.|+|||+..            ..+.+...+.|...+
T Consensus        24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~g   77 (124)
T d1xpja_          24 LPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQ   77 (124)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTT
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcC
Confidence            3578999999999877 9999999984            345566666676665

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=96.49  E-value=0.0014  Score=55.14  Aligned_cols=33  Identities=30%  Similarity=0.446  Sum_probs=24.5

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHH
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDR  188 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~  188 (285)
                      |++.+|++.+.+. +.+++.|++.....+.+.++
T Consensus        22 ~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~   55 (250)
T d2c4na1          22 PGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANR   55 (250)
T ss_dssp             TTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHH
T ss_pred             ccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHH
Confidence            6788999999887 88888887765555555444

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=96.45  E-value=0.0027  Score=53.07  Aligned_cols=38  Identities=11%  Similarity=0.158  Sum_probs=32.0

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~  193 (285)
                      |...+.|++|.+. ..+++-|..+...+..+++.+....
T Consensus        24 ~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~   62 (271)
T d1rkqa_          24 PAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQ   62 (271)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCS
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcC
Confidence            5567889999887 9999999999999999999886543

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=96.33  E-value=0.0021  Score=54.08  Aligned_cols=34  Identities=32%  Similarity=0.468  Sum_probs=23.8

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI  189 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~L  189 (285)
                      |++.++|+.|.+. ..+++.|++...-...+.+.+
T Consensus        26 ~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~   60 (261)
T d1vjra_          26 PGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKL   60 (261)
T ss_dssp             TTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHH
T ss_pred             chHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence            6788888888877 788888876555444444443

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=96.17  E-value=0.0055  Score=49.21  Aligned_cols=38  Identities=16%  Similarity=0.127  Sum_probs=30.5

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~  193 (285)
                      +...+.|+++.+. ..+++-|.-....+..+++.++..+
T Consensus        24 ~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~   62 (232)
T d1xvia_          24 QPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG   62 (232)
T ss_dssp             CTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence            4456788888877 8888889888888888888887643

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.12  E-value=0.0063  Score=48.88  Aligned_cols=38  Identities=13%  Similarity=0.135  Sum_probs=27.6

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~  193 (285)
                      |-..+.|+++.+. ..+++-|......+..++..+....
T Consensus        22 ~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~   60 (230)
T d1wr8a_          22 EKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG   60 (230)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCc
Confidence            4456677777766 7788888877778888887776654

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.06  E-value=0.0033  Score=52.68  Aligned_cols=33  Identities=18%  Similarity=0.348  Sum_probs=22.8

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHH
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDR  188 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~  188 (285)
                      |++.++|+.|.+. ..+++-|+++....+.+.++
T Consensus        21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~   54 (253)
T d1yv9a1          21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQR   54 (253)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHH
T ss_pred             ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence            6778888888876 78888887665444444443

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=95.92  E-value=0.0063  Score=51.00  Aligned_cols=36  Identities=8%  Similarity=0.017  Sum_probs=21.9

Q ss_pred             cHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023259          157 GLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (285)
Q Consensus       157 gl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~  192 (285)
                      ...+.|++|.+. ..+++-|.-+...+..+++.++..
T Consensus        22 ~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~   58 (285)
T d1nrwa_          22 ENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIK   58 (285)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCC
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCC
Confidence            345566666655 666666666666666666666544

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.78  E-value=0.0094  Score=48.34  Aligned_cols=35  Identities=9%  Similarity=0.231  Sum_probs=28.1

Q ss_pred             HHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023259          159 REFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (285)
Q Consensus       159 ~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~  193 (285)
                      .+-|+++.+. ..+++-|.-+...+..+++.++...
T Consensus        23 ~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~   58 (243)
T d1wzca1          23 KPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET   58 (243)
T ss_dssp             HHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence            3567777766 8888889888899999999888754

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.69  E-value=0.0058  Score=49.96  Aligned_cols=39  Identities=8%  Similarity=-0.033  Sum_probs=28.2

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023259          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (285)
Q Consensus       155 RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~  193 (285)
                      -|++.+-|+.+.+. ..+++-|.....++..+.+.++...
T Consensus        22 ~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~   61 (225)
T d1l6ra_          22 STKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING   61 (225)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc
Confidence            35666777777766 7777777777777788877776654

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=95.64  E-value=0.0058  Score=51.29  Aligned_cols=14  Identities=29%  Similarity=0.354  Sum_probs=12.3

Q ss_pred             eEEEEeCCCccccc
Q 023259           95 LTVVLDLDETLVCA  108 (285)
Q Consensus        95 ~tLVLDLD~TLV~s  108 (285)
                      +.++|||||||++.
T Consensus         3 k~vlFDlDGTL~~~   16 (253)
T d1wvia_           3 KGYLIDLDGTIYKG   16 (253)
T ss_dssp             CEEEEECBTTTEET
T ss_pred             CEEEEcCcCceEEC
Confidence            57999999999974

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.62  E-value=0.0084  Score=48.02  Aligned_cols=28  Identities=11%  Similarity=0.044  Sum_probs=17.7

Q ss_pred             cHHHHHHHhhhcceEEEEccCchhhHHH
Q 023259          157 GLREFLKQLSEFADLILFTAGLEGYARP  184 (285)
Q Consensus       157 gl~eFL~~ls~~yeIvI~Ta~~~~YA~~  184 (285)
                      ...+-|+++.+.-.+++.|.+....+..
T Consensus        22 ~~~~~i~~l~~~g~~~i~tgrr~~~~~~   49 (244)
T d2fuea1          22 EVAAFLQKLRSRVQIGVVGGSDYCKIAE   49 (244)
T ss_dssp             HHHHHHHHHTTTSEEEEECSSCHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEecCChhhhhh
Confidence            3566777777776666777665554443

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=95.20  E-value=0.016  Score=48.37  Aligned_cols=14  Identities=43%  Similarity=0.527  Sum_probs=12.2

Q ss_pred             eEEEEeCCCccccc
Q 023259           95 LTVVLDLDETLVCA  108 (285)
Q Consensus        95 ~tLVLDLD~TLV~s  108 (285)
                      +.+++||||||+++
T Consensus         3 Kli~~DlDGTL~~~   16 (267)
T d1nf2a_           3 RVFVFDLDGTLLND   16 (267)
T ss_dssp             CEEEEECCCCCSCT
T ss_pred             EEEEEeCCccccCC
Confidence            47899999999975

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=94.89  E-value=0.0071  Score=50.43  Aligned_cols=37  Identities=8%  Similarity=0.109  Sum_probs=24.8

Q ss_pred             ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023259          156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE  192 (285)
Q Consensus       156 Pgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~  192 (285)
                      |...+.|+.+.+. ..+++-|......+..+++.++..
T Consensus        23 ~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~   60 (269)
T d1rlma_          23 PRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDE   60 (269)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTT
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcc
Confidence            4566777777766 777777776666666666655544

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.85  E-value=0.011  Score=47.83  Aligned_cols=31  Identities=19%  Similarity=0.351  Sum_probs=24.2

Q ss_pred             EeeCccHHHHHHHhhh--cceEEEEccCchhhH
Q 023259          152 VFERPGLREFLKQLSE--FADLILFTAGLEGYA  182 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~--~yeIvI~Ta~~~~YA  182 (285)
                      ...=||+.+.|+.|++  .++++|-|+....+.
T Consensus        73 L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~  105 (195)
T d1q92a_          73 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFK  105 (195)
T ss_dssp             CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCS
T ss_pred             CCcccCHHHHHHHHhhccCccceEEccccccCc
Confidence            3456999999999986  378888898876543

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=94.81  E-value=0.016  Score=48.03  Aligned_cols=37  Identities=8%  Similarity=-0.166  Sum_probs=28.6

Q ss_pred             CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcC
Q 023259          155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDG  191 (285)
Q Consensus       155 RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp  191 (285)
                      -|...+.|+++.+. ..++|-|..+...+..+++.+..
T Consensus        30 ~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~   67 (283)
T d2b30a1          30 PSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENL   67 (283)
T ss_dssp             CHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHH
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCc
Confidence            35566778888766 88999999888888888877653

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.32  E-value=0.0026  Score=50.24  Aligned_cols=96  Identities=11%  Similarity=0.151  Sum_probs=67.8

Q ss_pred             EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEe-cCccccc-----CCccccccccccCCCCCc
Q 023259          152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLY-RPSTTST-----EYREHVKDLSCLSKDLCR  225 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~~LDp~~~f~~~l~-r~~c~~~-----k~~~~~KdL~~Lgrdl~~  225 (285)
                      +...|+...+...+.+.+.+++.|.+.......+...+.....+...+. ...+...     +.....+.+..++.+.++
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e  147 (206)
T d1rkua_          68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR  147 (206)
T ss_dssp             CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCE
T ss_pred             ccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhcccccc
Confidence            6678999999999988899999999999999999998887765544432 2221110     111223445556789999


Q ss_pred             EEEEECCcccccCCCCCeeeeC
Q 023259          226 TLIVDNNPFSFLLQPLNGIPCI  247 (285)
Q Consensus       226 vVIVDDs~~~~~~~p~NgI~I~  247 (285)
                      |+-|=|+..-......-|+.|-
T Consensus       148 viaiGDg~NDi~Ml~~Ag~gIA  169 (206)
T d1rkua_         148 VIAAGDSYNDTTMLSEAHAGIL  169 (206)
T ss_dssp             EEEEECSSTTHHHHHHSSEEEE
T ss_pred             eEEecCCccCHHHHHhCCccEE
Confidence            9999998887766555666554

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=93.72  E-value=0.026  Score=46.23  Aligned_cols=16  Identities=38%  Similarity=0.536  Sum_probs=13.3

Q ss_pred             CceEEEEeCCCccccc
Q 023259           93 QKLTVVLDLDETLVCA  108 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s  108 (285)
                      +|.++++||||||+..
T Consensus         2 ~~~li~~DlDGTL~~~   17 (244)
T d1s2oa1           2 RQLLLISDLDNTWVGD   17 (244)
T ss_dssp             CSEEEEECTBTTTBSC
T ss_pred             CceEEEEECcccCCCC
Confidence            4677889999999963

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.54  E-value=0.046  Score=43.35  Aligned_cols=12  Identities=50%  Similarity=0.592  Sum_probs=10.6

Q ss_pred             EEEEeCCCcccc
Q 023259           96 TVVLDLDETLVC  107 (285)
Q Consensus        96 tLVLDLD~TLV~  107 (285)
                      +|+|||||||+.
T Consensus         2 Li~~DlDGTL~~   13 (229)
T d1u02a_           2 LIFLDYDGTLVP   13 (229)
T ss_dssp             EEEEECBTTTBC
T ss_pred             EEEEEecCCCCC
Confidence            578999999995

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=92.17  E-value=0.013  Score=49.15  Aligned_cols=83  Identities=5%  Similarity=0.033  Sum_probs=49.9

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh----cC-CCceeEEEecCcccccCC--ccccccccccCCCCCc
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI----DG-ENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCR  225 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~L----Dp-~~~f~~~l~r~~c~~~k~--~~~~KdL~~Lgrdl~~  225 (285)
                      --||+.+||+++.+. .+|+.-|+-.+...+..++.|    +- ..--.+++++..-. .+.  ..++|+       .+=
T Consensus        87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~-~K~~rr~~Ik~-------y~I  158 (209)
T d2b82a1          87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKP-GQNTKSQWLQD-------KNI  158 (209)
T ss_dssp             ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCT-TCCCSHHHHHH-------TTE
T ss_pred             cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCC-CchHHHHHHHH-------cCe
Confidence            457999999999988 999999987665555444444    32 12234455544321 111  133444       233


Q ss_pred             EEEEECCcccccCCCCCee
Q 023259          226 TLIVDNNPFSFLLQPLNGI  244 (285)
Q Consensus       226 vVIVDDs~~~~~~~p~NgI  244 (285)
                      ++++.|+-.-+....+.|+
T Consensus       159 ~l~~GD~l~Df~aA~eagi  177 (209)
T d2b82a1         159 RIFYGDSDNDITAARDVGA  177 (209)
T ss_dssp             EEEEESSHHHHHHHHHTTC
T ss_pred             EEEecCCHHHHhHHHHcCC
Confidence            6788888877765444444

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=91.47  E-value=0.052  Score=44.91  Aligned_cols=13  Identities=38%  Similarity=0.611  Sum_probs=11.7

Q ss_pred             eEEEEeCCCcccc
Q 023259           95 LTVVLDLDETLVC  107 (285)
Q Consensus        95 ~tLVLDLD~TLV~  107 (285)
                      |.|++||||||++
T Consensus         2 k~if~DlDGTL~~   14 (260)
T d2rbka1           2 KALFFDIDGTLVS   14 (260)
T ss_dssp             CEEEECSBTTTBC
T ss_pred             eEEEEECCCCCcC
Confidence            6789999999996

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.78  E-value=0.089  Score=45.80  Aligned_cols=95  Identities=12%  Similarity=0.150  Sum_probs=62.4

Q ss_pred             EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC----ceeEEEecCccccc---CC---ccccc------
Q 023259          152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN----LFSLRLYRPSTTST---EY---REHVK------  214 (285)
Q Consensus       152 V~~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~----~f~~~l~r~~c~~~---k~---~~~~K------  214 (285)
                      +.+|||+.+|++.|.+. +.++|+|+|...+++++++.+....    .++..+.-+.....   +.   ..+.|      
T Consensus       134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~~  213 (291)
T d2bdua1         134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALK  213 (291)
T ss_dssp             CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHT
T ss_pred             CCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhhh
Confidence            67999999999999988 9999999999999999999986532    34433322211110   00   01111      


Q ss_pred             ccc--ccCCCCCcEEEEECCcccccC-----CCCCeeee
Q 023259          215 DLS--CLSKDLCRTLIVDNNPFSFLL-----QPLNGIPC  246 (285)
Q Consensus       215 dL~--~Lgrdl~~vVIVDDs~~~~~~-----~p~NgI~I  246 (285)
                      ...  .+..+.+++|+|=|+..-...     +.+|++.|
T Consensus       214 ~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~i  252 (291)
T d2bdua1         214 NTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKI  252 (291)
T ss_dssp             THHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEE
T ss_pred             hHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeee
Confidence            111  233467899999999886643     34565554

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.58  E-value=1.5  Score=33.23  Aligned_cols=40  Identities=8%  Similarity=0.074  Sum_probs=37.3

Q ss_pred             eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023259          154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN  193 (285)
Q Consensus       154 ~RPgl~eFL~~ls~~-yeIvI~Ta~~~~YA~~Vl~~LDp~~  193 (285)
                      +||++.+.++.|.+. .+++|-|-....-|..+.+.++...
T Consensus        22 lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~   62 (135)
T d2b8ea1          22 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL   62 (135)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE
T ss_pred             CCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh
Confidence            699999999999998 9999999999999999999998654

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=83.62  E-value=0.19  Score=40.89  Aligned_cols=15  Identities=20%  Similarity=0.031  Sum_probs=13.2

Q ss_pred             ceEEEEeCCCccccc
Q 023259           94 KLTVVLDLDETLVCA  108 (285)
Q Consensus        94 k~tLVLDLD~TLV~s  108 (285)
                      -+.||||+||||+++
T Consensus         2 IkaviFD~dGTL~d~   16 (257)
T d1swva_           2 IEAVIFAWAGTTVDY   16 (257)
T ss_dssp             CCEEEECSBTTTBST
T ss_pred             cEEEEEcCCCCeEeC
Confidence            468999999999985

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.81  E-value=0.2  Score=39.26  Aligned_cols=86  Identities=12%  Similarity=0.166  Sum_probs=57.4

Q ss_pred             CccHHHHHHHhhhcceEEEEccCchhhHHHHHH-----------HhcCCCceeEEEecCcccccCCc--cccccccccCC
Q 023259          155 RPGLREFLKQLSEFADLILFTAGLEGYARPLVD-----------RIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSK  221 (285)
Q Consensus       155 RPgl~eFL~~ls~~yeIvI~Ta~~~~YA~~Vl~-----------~LDp~~~f~~~l~r~~c~~~k~~--~~~KdL~~Lgr  221 (285)
                      .+++.+++   .....+++.|+........+..           .++...+|..+++.+. ...|..  .|..-++++|.
T Consensus        99 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~-~~~KP~p~~f~~~~~~lg~  174 (225)
T d2g80a1          99 YADAIDFI---KRKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINT-SGKKTETQSYANILRDIGA  174 (225)
T ss_dssp             CHHHHHHH---HHCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHH-HCCTTCHHHHHHHHHHHTC
T ss_pred             hhhHHHHH---hhHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccc-cCCCCChhHhHHHHHhccc
Confidence            34444444   3557788999887765554443           3334456777665533 223433  68889999999


Q ss_pred             CCCcEEEEECCcccccCCCCCee
Q 023259          222 DLCRTLIVDNNPFSFLLQPLNGI  244 (285)
Q Consensus       222 dl~~vVIVDDs~~~~~~~p~NgI  244 (285)
                      +++++++|+|+..........|+
T Consensus       175 ~p~e~l~VgD~~~Dv~~A~~aG~  197 (225)
T d2g80a1         175 KASEVLFLSDNPLELDAAAGVGI  197 (225)
T ss_dssp             CGGGEEEEESCHHHHHHHHTTTC
T ss_pred             CchhceeecCCHHHHHHHHHcCC
Confidence            99999999999877666666664

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.66  E-value=0.21  Score=39.11  Aligned_cols=14  Identities=29%  Similarity=0.356  Sum_probs=12.2

Q ss_pred             eEEEEeCCCccccc
Q 023259           95 LTVVLDLDETLVCA  108 (285)
Q Consensus        95 ~tLVLDLD~TLV~s  108 (285)
                      .+++||+||||+++
T Consensus         4 ~~~lfD~dGTl~d~   17 (225)
T d2g80a1           4 STYLLDIEGTVCPI   17 (225)
T ss_dssp             SEEEECCBTTTBCT
T ss_pred             CEEEEcCCCCCccc
Confidence            58999999999864

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=80.59  E-value=0.31  Score=38.44  Aligned_cols=16  Identities=19%  Similarity=0.291  Sum_probs=13.6

Q ss_pred             CCceEEEEeCCCcccc
Q 023259           92 LQKLTVVLDLDETLVC  107 (285)
Q Consensus        92 ~~k~tLVLDLD~TLV~  107 (285)
                      ..-++|+||+||||++
T Consensus         5 ~~i~~vlfD~dGTl~~   20 (253)
T d1zs9a1           5 AEVTVILLDIEGTTTP   20 (253)
T ss_dssp             TTCCEEEECCBTTTBC
T ss_pred             CCCCEEEEeCcCCCcc
Confidence            3578899999999985

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.14  E-value=0.29  Score=39.33  Aligned_cols=16  Identities=38%  Similarity=0.522  Sum_probs=13.7

Q ss_pred             CceEEEEeCCCccccc
Q 023259           93 QKLTVVLDLDETLVCA  108 (285)
Q Consensus        93 ~k~tLVLDLD~TLV~s  108 (285)
                      +-+.++||+||||+++
T Consensus         5 ~IKaviFD~dGTL~d~   20 (247)
T d2gfha1           5 RVRAVFFDLDNTLIDT   20 (247)
T ss_dssp             CCCEEEECCBTTTBCH
T ss_pred             CCcEEEEcCCCCcCcC
Confidence            4678999999999964