Citrus Sinensis ID: 023273

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280----
Protein Sequence
MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGLLL
Secondary Structure (PSIPRED)
cEEEEEcccccccccEEEcccccccccccccEEEEEEEEcccHHHHHHHccccccccccccccccccccEEEEEEcccccccccccEEEEEcccccccccccccccEEEEcccccccccccccccHHHHHHcHHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHcccccEEEEccccccHHHHHHccccEEEEccccccccccccccEEEEccccHHHHHHHHccccEEEEEcccccccccEEEEEccHHHHHHHHHHHHccccEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccccHEEEEcccccccccccccEEEEEEEEEEccHcHHHHccccccccccccEEccccEEEEEEEEcccccccccccEEEcccccccccccccccccEcEEEEccHHHEEEcccccHHHHHHHHcHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHcccEEEEcccccHHHHHccccEEEEccccHHHHHHHEccccEEEEEEccccccccEEEEcccHHHHHHHHHHHHcccEEEEEccccccc
Coil and Loop (DISEMBL)
MKAWVYKEygnsqsvlkfetnvevpslreDQVLIKVVAAALNPIDFKRMlgafsatdsplptipgydvaGVVEKVGSqvkkfkvgdevygdinekaldhpkrngslaEYTAVEENLLalkpknlsfveaaslplatETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAskvaatssTAKLDLLRSLGADLAIDYTkeniedlpekFDVVFDAVGQCDKALKAVKEGGRVVSIigsvtppassfvltsdgsileklnpyfesgkvkaiidpkglll
Flexible Loop (DISEMBL)
mkawvykeygnsqsvlkfETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDinekaldhpkrngSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSiigsvtppassfvltsDGSILEKlnpyfesgkvkaiidpkglll
Low Complexity Region (SEG)
MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGaskvaatsstakLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGLLL
Disordered region (IsUnstruct)
***WVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALD******SLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAII*******
Disordered Region (DISOPRED)
MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGLL*
Disordered Region (DISEMBL)
MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGLLL
Disordered Region (DISPRO)
MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPK****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGLLL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	284	2.2.26 [Sep-21-2011]
Q9ZUC1	386	Quinone oxidoreductase-li	yes	no	0.985	0.725	0.729	1e-115
Q7T3C7	387	Reticulon-4-interacting p	yes	no	0.746	0.547	0.396	3e-31
Q0VC50	396	Reticulon-4-interacting p	yes	no	0.848	0.608	0.356	3e-30
Q924D0	396	Reticulon-4-interacting p	yes	no	0.753	0.540	0.371	1e-29
Q8WWV3	396	Reticulon-4-interacting p	yes	no	0.753	0.540	0.359	3e-29
Q8H0M1	329	Quinone-oxidoreductase ho	N/A	no	0.683	0.589	0.4	1e-28
O42909	347	Zinc-type alcohol dehydro	yes	no	0.838	0.685	0.356	5e-27
Q54II4	352	Reticulon-4-interacting p	yes	no	0.834	0.673	0.303	1e-25
P54006	297	Protein TOXD OS=Cochliobo	N/A	no	0.725	0.693	0.355	2e-25
Q8CRJ7	336	Zinc-type alcohol dehydro	no	no	0.735	0.622	0.314	5e-24

>sp|Q9ZUC1|QORL_ARATH Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2

 Score =  416 bits (1068), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/281 (72%), Positives = 241/281 (85%), Gaps = 1/281 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY +YG    VLK E+N+ VP ++EDQVLIKVVAAALNP+D KR  G F ATDSPL
Sbjct: 78  MKAWVYSDYGGVD-VLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPL 136

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGS VK  K GDEVY +++EKAL+ PK+ GSLAEYTAVEE LLALK
Sbjct: 137 PTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALK 196

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKN+ F +AA LPLA ETA EGL R+ FSAGKSILVL GAGGVG++VIQLAKHV+GASKV
Sbjct: 197 PKNIDFAQAAGLPLAIETADEGLVRTEFSAGKSILVLNGAGGVGSLVIQLAKHVYGASKV 256

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AAT+ST KL+L+RSLGADLAIDYTKENIEDLP+K+DVVFDA+G CDKA+K +KEGG+VV+
Sbjct: 257 AATASTEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGMCDKAVKVIKEGGKVVA 316

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKG 281
           + G+VTPP   FV+TS+G +L+KLNPY ESGKVK ++DPKG
Sbjct: 317 LTGAVTPPGFRFVVTSNGDVLKKLNPYIESGKVKPVVDPKG 357

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|Q7T3C7|RT4I1_DANRE Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Danio rerio GN=rtn4ip1 PE=2 SV=2

 Score =  135 bits (340), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/247 (39%), Positives = 137/247 (55%), Gaps = 35/247 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSAT--- 56
           M AWV  +YG +  VL+F  N  +P +   ++V++KV AA LNPID     G  +AT   
Sbjct: 29  MPAWVIDKYGKN-DVLRFTKNAALPIIHYPNEVVVKVHAAGLNPIDISMRGGYGAATMAM 87

Query: 57  -DSPL---------PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSL 106
              PL         P I G DV+G + + G  VK FK GD+V+  I       P + GSL
Sbjct: 88  KRDPLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIP------PWKQGSL 141

Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYE------GLERSAFSAGKSILVLGGA 160
           AE+  V  N ++ KPK+L   EAAS+P    TA+       GL +   SA K +L+LGG+
Sbjct: 142 AEFVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDN-SAKKRVLILGGS 200

Query: 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYT----KENIEDLPEKFD 216
           GGVGT  IQ+ K  +GA  V  T S     L+R LGAD  +DYT    ++ +++L EKFD
Sbjct: 201 GGVGTFAIQMVK-AWGA-HVTVTCSQNAERLVRDLGADDVVDYTAGPVEKQLKNL-EKFD 257

Query: 217 VVFDAVG 223
           ++ D++G
Sbjct: 258 LILDSIG 264

May be a potent inhibitor of regeneration.

Danio rerio (taxid: 7955)

>sp|Q0VC50|RT4I1_BOVIN Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1

 Score =  132 bits (332), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/283 (35%), Positives = 146/283 (51%), Gaps = 42/283 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLG----AFSA 55
           M AWV  +YG S  VL+F  N+ +P +   ++V+IKV AA++NPID     G    A + 
Sbjct: 43  MPAWVIDKYG-SNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSGYGATALNM 101

Query: 56  TDSPL---------PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSL 106
              PL         P   G DV+GVV + G  V+ FK GDEV+  +       P + G+L
Sbjct: 102 KRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVP------PWKQGTL 155

Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAG 161
           +E+  V  N ++ KP++L+  +AASLP    TA+  + +          GK +L+LG +G
Sbjct: 156 SEFVVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRVLILGASG 215

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---DLPEKFDVV 218
           GVGT  IQ+ K     + V A  S    +L+R LGAD  IDY   N+E      + FD +
Sbjct: 216 GVGTFAIQVMKA--WDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEAQLKSSKPFDFI 273

Query: 219 FDAVGQCDK--ALKAVKE--GGRVVSIIGSVTPPASSFVLTSD 257
            D VG   +  ALK +K+  G   V++   VTP    F+L  D
Sbjct: 274 LDNVGGSTETWALKFLKKWSGATYVTL---VTP----FLLNMD 309

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Bos taurus (taxid: 9913)

>sp|Q924D0|RT4I1_MOUSE Reticulon-4-interacting protein 1, mitochondrial OS=Mus musculus GN=Rtn4ip1 PE=1 SV=2

 Score =  130 bits (327), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/245 (37%), Positives = 132/245 (53%), Gaps = 31/245 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLG----AFSA 55
           M AWV  +YG ++ VL+F  N+ +P +   ++V+IKV AA++NPID     G    A + 
Sbjct: 43  MPAWVIDKYGKNE-VLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATALNM 101

Query: 56  TDSPL---------PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSL 106
              PL         P   G DV+GVV + G  VK F+ GDEV+  +       P + G+L
Sbjct: 102 KRDPLHMKTKGEEFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVP------PWKQGTL 155

Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAG 161
           +E+  V  N ++ KPK+L+  +AASLP    TA+  + +          GK  L+LG +G
Sbjct: 156 SEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSDKNCKGKRALILGASG 215

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK---FDVV 218
           GVGT  IQ+ K  +GA   A  S  A  +L+R LGAD  IDYT  ++E+  +    FD +
Sbjct: 216 GVGTFAIQVMK-AWGAHVTAVCSKDAS-ELVRKLGADEVIDYTLGSVEEQLKSLKLFDFI 273

Query: 219 FDAVG 223
            D VG
Sbjct: 274 LDNVG 278

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Mus musculus (taxid: 10090)

>sp|Q8WWV3|RT4I1_HUMAN Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2

 Score =  129 bits (323), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 130/245 (53%), Gaps = 31/245 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLG----AFSA 55
           M AWV  +YG ++ VL+F  N+ +P +   ++V++KV AA++NPID     G    A + 
Sbjct: 43  MPAWVIDKYGKNE-VLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNM 101

Query: 56  TDSPL---------PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSL 106
              PL         P   G DV+GVV + G  VK FK GDEV+  +       P + G+L
Sbjct: 102 KRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP------PWKQGTL 155

Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAG 161
           +E+  V  N ++ KPK+L+  +AASLP    TA+  + +          GK +L+LG +G
Sbjct: 156 SEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASG 215

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK---FDVV 218
           GVGT  IQ+ K     + V A  S    +L+R LGAD  IDY   ++E+  +    FD +
Sbjct: 216 GVGTFAIQVMKA--WDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFI 273

Query: 219 FDAVG 223
            D VG
Sbjct: 274 LDNVG 278

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Homo sapiens (taxid: 9606)

>sp|Q8H0M1|QORH_SPIOL Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1

 Score =  127 bits (318), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/210 (40%), Positives = 110/210 (52%), Gaps = 16/210 (7%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT-DSP 59
           M A  Y  YG     LK    V VP  + D++L+K+ AA LNPID+K   G         
Sbjct: 6   MHAIQYSGYGGGTDALK-HVEVAVPDPKSDELLLKIEAATLNPIDWKIQKGVLRPLLPRK 64

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
            PTIPG DVAG V + GS V +FK GD+V        L H    G+LAEY   +ENL   
Sbjct: 65  FPTIPGTDVAGEVVQAGSAVNRFKTGDKVVA-----VLSH-ATGGALAEYAVAKENLTVA 118

Query: 120 KPKNLSFVEAASLPLATETAYEGLERSA------FSAGKSILVLGGAGGVGTMVIQLAKH 173
           +P  +S  E A+LP+A  TA++ L + A          K+IL+   +GGVG   +QLAK 
Sbjct: 119 RPPEVSAAEGAALPVAALTAHQALTQFANIKLDGSGERKNILITAASGGVGHYAVQLAK- 177

Query: 174 VFGASKVAATSSTAKLDLLRSLGADLAIDY 203
             G + V AT     LD ++ LGAD  +DY
Sbjct: 178 -LGNTHVTATCGARNLDFVKGLGADEVLDY 206

Spinacia oleracea (taxid: 3562)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O42909|YBI2_SCHPO Zinc-type alcohol dehydrogenase-like protein C16A3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16A3.02c PE=3 SV=1

 Score =  121 bits (304), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 130/258 (50%), Gaps = 20/258 (7%)

Query: 3   AWVYKEYGNSQSVLKFETNVEVPS---LREDQVLIKVVAAALNPIDFKRM--LGAFSATD 57
           AW+Y   G  + VL  E  + +P+   L    VL++VVA ++NP+D+K M      +   
Sbjct: 14  AWLYNRTGKPKDVLYLEKGLHIPNPAELGPYDVLVEVVATSINPLDYKLMNTYQMIAKAL 73

Query: 58  SPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL 117
             LP IPGYD AG V  VGS+VK+F     V+G   +      ++ GS A +    +  +
Sbjct: 74  FKLPNIPGYDFAGRVLAVGSEVKEFSATQRVWG--CQSFPRAGRQGGSCATHIVTGDKDV 131

Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
              P  +SF E A   +A  TA+E L R      G  +++ G +GGVGT  + LAK +  
Sbjct: 132 WHLPDGVSFNEGAGFGIAGLTAWEVLVRQMKVKPGTKLVIEGASGGVGTFAVALAKAL-- 189

Query: 177 ASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IEDLPE--KFDVVFDAVGQCDKAL---- 229
             +V   SST  LDL +SLGA   +DY K+N +E L +   +D VFD V   D  L    
Sbjct: 190 ECEVTTISSTENLDLCKSLGATHTLDYKKDNLVERLADLGPYDFVFDCVN--DNVLYRAS 247

Query: 230 -KAVKEGGRVVSIIGSVT 246
            K VK  G    I G +T
Sbjct: 248 SKFVKPDGAFFGIGGDIT 265

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q54II4|RT4I1_DICDI Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=rtn4ip1 PE=3 SV=1

 Score =  117 bits (292), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 134/260 (51%), Gaps = 23/260 (8%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT---D 57
           MK  +   YG S  +L+++T++ VP   + QVLIK+ + ++NP+D     G  S+     
Sbjct: 1   MKGILLNGYGESLDLLEYKTDLPVPKPIKSQVLIKIHSTSINPLDNVMRKGYASSIVDLK 60

Query: 58  SPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL 117
             LP I G + +G + ++G  V  +++GD+V+      +   P   GS  EY  V+E+ +
Sbjct: 61  LKLPIILGRECSGEIVEIGDSVWDYEIGDQVW------SASPPFSMGSHCEYITVDESEI 114

Query: 118 ALKPKNLSFVEAASLPLATETAYEGL-----ERSAFSAGKSILVLGGAGGVGTMVIQLAK 172
           +LKPKNL+  ++AS+P A+ TA+  +          +    ILV GG G VG  ++QL K
Sbjct: 115 SLKPKNLTHQQSASIPFASLTAWNAIYNVLPTNKKITTNTKILVNGGNGSVGFFILQLLK 174

Query: 173 HVFGASKVAATSSTAKLDLLRSLG-ADLAIDYTKENIEDLP-EKFDVVFDAV----GQCD 226
                ++V+ T +    + L+ L   +  IDY    I D    KFD++F+       Q +
Sbjct: 175 KHLNVNQVSTTCNIKHFEKLKKLTLVNETIDYNNLKINDNDNNKFDLIFNCYDGGKNQNE 234

Query: 227 ---KALKAVKEGGRVVSIIG 243
              K + A+K+GG ++   G
Sbjct: 235 NEKKCIDALKDGGNLIGFNG 254

Dictyostelium discoideum (taxid: 44689)

>sp|P54006|TOXD_COCCA Protein TOXD OS=Cochliobolus carbonum GN=TOXD PE=3 SV=1

 Score =  116 bits (291), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 126/242 (52%), Gaps = 36/242 (14%)

Query: 24  VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK-F 82
           +P LR+D +L++ V+ ALNP D+K +L       SP   + G D AG+VE+VG  VKK F
Sbjct: 23  IPKLRDDYILVRTVSVALNPTDWKHILRL-----SPPGCLVGCDYAGIVEEVGRSVKKPF 77

Query: 83  KVGDEVYGDI---NEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETA 139
           K GD V G     N    D    +G+ AE   V+ ++ A  P+NLSF EAA+L +  +T 
Sbjct: 78  KKGDRVCGFAHGGNAVFSD----DGTFAEVITVKGDIQAWIPENLSFQEAATLGVGIKTV 133

Query: 140 YEGLERS--------AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191
            +GL +S               IL+ GG+   GT+ IQLAK      +V  T S    +L
Sbjct: 134 GQGLYQSLKLSWPTTPIEHAVPILIYGGSTATGTLAIQLAK--LSGYRVITTCSPHHFEL 191

Query: 192 LRSLGADLAIDY----TKENIEDLPE-KFDVVFDAVGQ------CDKALKAVKEGGRVVS 240
           ++SLGADL  DY    + ++I    + K  +VFD +        CD+A+    EGG   +
Sbjct: 192 MKSLGADLVFDYHEITSADHIRRCTQNKLKLVFDTISIDVSARFCDRAMST--EGGEYSA 249

Query: 241 II 242
           ++
Sbjct: 250 LL 251

Unique to isolates that make the cyclic peptide HC-toxin, but has no role in toxin biosynthesis.

Cochliobolus carbonum (taxid: 5017)

>sp|Q8CRJ7|ZDH1_STAES Zinc-type alcohol dehydrogenase-like protein SE_1777 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1777 PE=3 SV=1

 Score =  111 bits (278), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 124/242 (51%), Gaps = 33/242 (13%)

Query: 19  ETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78
           E N ++P     ++L+KV + ++NP+D K+     +     +P + G+D  GV+EK+G Q
Sbjct: 20  EFNFDIPHPSGHELLVKVQSISVNPVDTKQR----TMPVDKVPRVLGFDAVGVIEKIGDQ 75

Query: 79  VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATET 138
           V  F+ GD V+   +      P +NGS  EY  +EE L+A  P NL   +AASLPL   T
Sbjct: 76  VSMFQEGDVVFYSGS------PNQNGSNEEYQLIEEYLVAKAPTNLKSEQAASLPLTGLT 129

Query: 139 AYEGL-------ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191
           AYE L       +  + + GKS+L++ GAGGVG++  Q+AK  +G   +   S    +  
Sbjct: 130 AYETLFDVFGISKEPSENKGKSLLIINGAGGVGSIATQIAK-FYGLKVITTASREDTIKW 188

Query: 192 LRSLGADLAIDYTKENIEDLPEKFD-----------VVFDAVGQCDKALKAVKEGGRVVS 240
             ++GAD+ +++ K    DL ++F              FD     +  +  VK  G + +
Sbjct: 189 SVNMGADVVLNHKK----DLSQQFKDNHIEGVDYIFCTFDTDMYYEMMVNLVKPRGHIAT 244

Query: 241 II 242
           I+
Sbjct: 245 IV 246

Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	284
307135978	383	alcohol dehydrogenase [Cucumis melo subs	0.985	0.731	0.775	1e-121
118481558	322	unknown [Populus trichocarpa]	0.989	0.872	0.793	1e-121
449434925	383	PREDICTED: quinone oxidoreductase-like p	0.985	0.731	0.768	1e-120
356567630	395	PREDICTED: quinone oxidoreductase-like p	0.985	0.708	0.765	1e-120
310747931	383	chloroplastic alkenal/one oxidoreductase	0.985	0.731	0.765	1e-120
449478569	383	PREDICTED: quinone oxidoreductase-like p	0.985	0.731	0.765	1e-120
255568816	389	alcohol dehydrogenase, putative [Ricinus	0.985	0.719	0.765	1e-119
356526809	397	PREDICTED: quinone oxidoreductase-like p	0.985	0.705	0.761	1e-119
388495252	387	unknown [Lotus japonicus]	0.985	0.723	0.736	1e-117
118488941	383	unknown [Populus trichocarpa x Populus d	0.985	0.731	0.747	1e-117

>gi|307135978|gb|ADN33837.1| alcohol dehydrogenase [Cucumis melo subsp. melo]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/281 (77%), Positives = 249/281 (88%), Gaps = 1/281 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYG    VLKF+T+V VP ++EDQVLIKVVAAALNP+D KRMLG F ATDSPL
Sbjct: 75  MKAWVYGEYGGVD-VLKFDTSVSVPEVKEDQVLIKVVAAALNPVDGKRMLGKFKATDSPL 133

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGSQVK+ K GDEVYG+INEKALD PK+ GSLAEYTAVEE LLALK
Sbjct: 134 PTVPGYDVAGVVVKVGSQVKELKEGDEVYGNINEKALDGPKQFGSLAEYTAVEEKLLALK 193

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKN+ F++AA LPLA ETAYEGLE++ FSAGKSILVL GAGGVG++VIQLAK+VFGASKV
Sbjct: 194 PKNIDFIQAAGLPLAIETAYEGLEKTNFSAGKSILVLNGAGGVGSLVIQLAKNVFGASKV 253

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AAT+ST KL+ L+SLG DLAIDYTKENIEDLPEKFDVV+DA+GQCDKA+K VKEGG VV+
Sbjct: 254 AATASTGKLEFLKSLGVDLAIDYTKENIEDLPEKFDVVYDAIGQCDKAVKVVKEGGSVVA 313

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKG 281
           + G+VTPP   FV+TSDG++L+KLNPY ESGKVK I+DPKG
Sbjct: 314 LTGAVTPPGFRFVVTSDGAVLKKLNPYLESGKVKPIVDPKG 354

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481558|gb|ABK92721.1| unknown [Populus trichocarpa]

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 223/281 (79%), Positives = 253/281 (90%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYGN  +VLK ++NV VP ++EDQVLIKVVAA++NP+D KRMLG F  +DSP+
Sbjct: 13  MKAWVYGEYGNVSNVLKLDSNVTVPQVKEDQVLIKVVAASINPVDAKRMLGMFKVSDSPV 72

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGSQVK+ KVGDEVYGDINEKALDHPKR GSLAEYTAVEENLL+LK
Sbjct: 73  PTVPGYDVAGVVVKVGSQVKRLKVGDEVYGDINEKALDHPKRFGSLAEYTAVEENLLSLK 132

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKNLSF EAASLPL  ETA+EGLER+ FSAGKSILVLGGAGGVGT +IQLAKHVFGAS V
Sbjct: 133 PKNLSFAEAASLPLVIETAHEGLERTGFSAGKSILVLGGAGGVGTQIIQLAKHVFGASTV 192

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AATSST+KL+LL+SLGADLAIDYTKEN EDLPEKFDVV+DAVGQCD+A+KAVKE G VV+
Sbjct: 193 AATSSTSKLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAVGQCDRAVKAVKEDGSVVT 252

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKG 281
           I+G +TPPA  FVLTS+GS+L+KL PY ESGKVK ++DPKG
Sbjct: 253 IVGPITPPALIFVLTSNGSVLDKLKPYLESGKVKPVLDPKG 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434925|ref|XP_004135246.1| PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Cucumis sativus]

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/281 (76%), Positives = 248/281 (88%), Gaps = 1/281 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYG    VLKF+++V VP ++EDQVLIKVVAAALNP+D KRMLG F ATDSPL
Sbjct: 75  MKAWVYGEYGGVD-VLKFDSSVSVPEVKEDQVLIKVVAAALNPVDGKRMLGKFKATDSPL 133

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGSQVK+ K GDEVYG+INEKALD PK+ GSLAEYTAVEE LLA+K
Sbjct: 134 PTVPGYDVAGVVVKVGSQVKELKEGDEVYGNINEKALDGPKQFGSLAEYTAVEEKLLAVK 193

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKN+ FV+AA LPLA ETAYEGLE++ FS GKSILVL GAGGVG++VIQLAK+VFGASKV
Sbjct: 194 PKNIDFVQAAGLPLAIETAYEGLEKTNFSTGKSILVLNGAGGVGSLVIQLAKNVFGASKV 253

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AAT+ST KL+ L+SLG DLAIDYTKENIEDLPEKFDVV+DA+GQCDKA+K VKEGG VV+
Sbjct: 254 AATASTGKLEFLKSLGVDLAIDYTKENIEDLPEKFDVVYDAIGQCDKAVKVVKEGGSVVA 313

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKG 281
           + G+VTPP   FV+TSDG++L+KLNPY ESGKVK I+DPKG
Sbjct: 314 LTGAVTPPGFRFVVTSDGAVLKKLNPYLESGKVKPIVDPKG 354

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567630|ref|XP_003552020.1| PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Glycine max]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/281 (76%), Positives = 244/281 (86%), Gaps = 1/281 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYG    VLK ++NV VP ++EDQVLIKVVAAALNP+D KR  G F ATDSPL
Sbjct: 87  MKAWVYGEYGGVD-VLKLDSNVTVPDVKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPL 145

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGSQVK FKVGDEVYGD+NEKAL+ PK+ GSLAEYTAVEE LLA K
Sbjct: 146 PTVPGYDVAGVVVKVGSQVKDFKVGDEVYGDVNEKALEGPKQFGSLAEYTAVEEKLLASK 205

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKNL F +AA+LPLA ETAYEGLER+ FS GKSILVL G+GGVG++VIQLAK VFGAS+V
Sbjct: 206 PKNLDFAQAAALPLAIETAYEGLERTGFSPGKSILVLNGSGGVGSLVIQLAKQVFGASRV 265

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AATSST  LDLL+SLGADLAIDYTKEN EDLPEKFDVV+DA+GQCD+A+KAVKEGG VV+
Sbjct: 266 AATSSTRNLDLLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAVKEGGSVVA 325

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKG 281
           + G+VTPP   FV+TS+G++L KLNPY ESGKVK I+DPKG
Sbjct: 326 LTGAVTPPGFRFVVTSNGAVLRKLNPYLESGKVKPIVDPKG 366

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|310747931|dbj|BAJ23910.1| chloroplastic alkenal/one oxidoreductase [Cucumis sativus]

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/281 (76%), Positives = 248/281 (88%), Gaps = 1/281 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYG    VLKF+++V VP ++EDQVLIKVVAAALNP+D KRMLG F ATDSPL
Sbjct: 75  MKAWVYGEYGGVD-VLKFDSSVSVPEVKEDQVLIKVVAAALNPVDGKRMLGKFKATDSPL 133

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGSQVK+ K GDEVYG+INEKALD PK+ GSLAEYTAVEE LLA+K
Sbjct: 134 PTVPGYDVAGVVVKVGSQVKELKEGDEVYGNINEKALDGPKQFGSLAEYTAVEEKLLAVK 193

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKN+ FV+AA LPLA ETAYEGLE++ FS GKSILVL GAGGVG++VIQLAK+VFGASKV
Sbjct: 194 PKNIDFVQAAGLPLAIETAYEGLEKTNFSTGKSILVLNGAGGVGSLVIQLAKNVFGASKV 253

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AAT+ST KL+ L+SLG DLAIDYTKENIEDLPEKFDVV+DA+GQCDKA+K VK+GG VV+
Sbjct: 254 AATASTGKLEFLKSLGVDLAIDYTKENIEDLPEKFDVVYDAIGQCDKAVKVVKKGGSVVA 313

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKG 281
           + G+VTPP   FV+TSDG++L+KLNPY ESGKVK I+DPKG
Sbjct: 314 LTGAVTPPGFRFVVTSDGAVLKKLNPYLESGKVKPIVDPKG 354

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449478569|ref|XP_004155355.1| PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Cucumis sativus]

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/281 (76%), Positives = 248/281 (88%), Gaps = 1/281 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYG    VLKF+++V VP ++EDQVLIKVVAAALNP+D KRMLG F ATDSPL
Sbjct: 75  MKAWVYGEYGGVD-VLKFDSSVSVPEVKEDQVLIKVVAAALNPVDGKRMLGKFKATDSPL 133

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGSQVK+ K GDEVYG+INEKALD PK+ GSLAEYTAVEE LLA+K
Sbjct: 134 PTVPGYDVAGVVVKVGSQVKELKEGDEVYGNINEKALDGPKQFGSLAEYTAVEEKLLAVK 193

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKN+ FV+AA LPLA ETAYEGLE++ FS GKSILVL GAGGVG++VIQLAK+VFGASKV
Sbjct: 194 PKNIDFVQAAGLPLAIETAYEGLEKTNFSTGKSILVLNGAGGVGSLVIQLAKNVFGASKV 253

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AAT+ST KL+ L+SLG DLAIDYTKENIEDLPEKFDVV+DA+GQCDKA+K VK+GG VV+
Sbjct: 254 AATASTGKLEFLKSLGVDLAIDYTKENIEDLPEKFDVVYDAIGQCDKAVKVVKKGGSVVA 313

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKG 281
           + G+VTPP   FV+TSDG++L+KLNPY ESGKVK I+DPKG
Sbjct: 314 LTGAVTPPGFRFVVTSDGAVLKKLNPYLESGKVKPIVDPKG 354

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568816|ref|XP_002525379.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223535342|gb|EEF37017.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 215/281 (76%), Positives = 245/281 (87%), Gaps = 1/281 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYG    VLKF+  V VP ++EDQVLIKVVAAALNP+D KR  G F ATDSPL
Sbjct: 81  MKAWVYGEYGGVD-VLKFDEKVSVPEVKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPL 139

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAG+V KVGS+VK+ K GDEVYGDINEKAL+ PK+ GSLAEYTAVEE LLALK
Sbjct: 140 PTVPGYDVAGIVVKVGSKVKELKEGDEVYGDINEKALEGPKQFGSLAEYTAVEEKLLALK 199

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKNL FV+AASLPLA ETAYEGLER+ FSAGKSILVL G+GGVG++VIQLAKHVFGASKV
Sbjct: 200 PKNLDFVQAASLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKHVFGASKV 259

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AATS T  L++L+SLGADLAIDYTKEN EDLPEKFDVV+DA+GQCD+A+KAVKEGG VV+
Sbjct: 260 AATSGTRNLEILKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAVKEGGSVVA 319

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKG 281
           + G+VTPP   FV+TS+G +L+KLNPY ESGKVK +IDPKG
Sbjct: 320 LTGAVTPPGFRFVVTSNGDVLKKLNPYLESGKVKPVIDPKG 360

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526809|ref|XP_003532009.1| PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Glycine max]

 Score =  432 bits (1110), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/281 (76%), Positives = 242/281 (86%), Gaps = 1/281 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYG    VLK ++NV VP ++EDQVLIKVVAAALNP+D KR  G F ATDSPL
Sbjct: 89  MKAWVYGEYGGVD-VLKLDSNVAVPDVKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPL 147

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGSQVK FKVGDEVYGD+NEKAL+ PK+ GSLAEYTAVEE LLA K
Sbjct: 148 PTVPGYDVAGVVVKVGSQVKDFKVGDEVYGDVNEKALEGPKQFGSLAEYTAVEEKLLAPK 207

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKNL F +AASLPLA ETAYEGLER+ FS GKSILVL G+GGVG++VIQLAK V+GAS+V
Sbjct: 208 PKNLDFAQAASLPLAIETAYEGLERTGFSPGKSILVLNGSGGVGSLVIQLAKQVYGASRV 267

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AATSST  LDLL+SLGADLAIDYTKEN EDLPEKFDVV+DA+GQCD+A+KAVKE G VV+
Sbjct: 268 AATSSTRNLDLLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAVKEDGSVVA 327

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKG 281
           + G+VTPP   FV+TS+G +L KLNPY ESGKVK I+DPKG
Sbjct: 328 LTGAVTPPGFRFVVTSNGEVLRKLNPYLESGKVKPIVDPKG 368

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388495252|gb|AFK35692.1| unknown [Lotus japonicus]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 207/281 (73%), Positives = 243/281 (86%), Gaps = 1/281 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYG    VLKF++NV VP L+EDQVL++VVAAALNP+D KR  G F ATDSPL
Sbjct: 79  MKAWVYGEYGGVD-VLKFDSNVAVPDLKEDQVLVRVVAAALNPVDAKRRQGKFKATDSPL 137

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGS+VK+F+VGDEVYGD+NEKAL+ PK+ GSLAEYTAVEE LLA K
Sbjct: 138 PTVPGYDVAGVVVKVGSEVKEFRVGDEVYGDVNEKALEGPKQFGSLAEYTAVEEKLLAPK 197

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKNL F +AASLPLA ETAYEGLER+ FS+GKSILVL G+GGVG++VIQLAK VFGA++V
Sbjct: 198 PKNLDFAQAASLPLAIETAYEGLERTGFSSGKSILVLNGSGGVGSLVIQLAKQVFGAARV 257

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AAT  T  L+LL+SLG DLAIDYTKEN EDLPEKFDVV+DA+GQCD+A+KA+KEGG VV+
Sbjct: 258 AATPGTRNLELLKSLGVDLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAIKEGGSVVA 317

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKG 281
           + G+VTPP   FV+TS+G++L KLNPY ESGKVK I+D KG
Sbjct: 318 LTGAVTPPGFRFVVTSNGTVLRKLNPYLESGKVKPIVDSKG 358

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488941|gb|ABK96279.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/281 (74%), Positives = 243/281 (86%), Gaps = 1/281 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA VY EYG  + VLKF+  V VP ++EDQVLIKVVAAALNP+D KR  G F ATDSPL
Sbjct: 75  MKACVYGEYGGVE-VLKFDDKVSVPEVKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPL 133

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVG+QVK+ K GD VYG+INEKAL+ PK+ GSLAEYTAVEE LLALK
Sbjct: 134 PTVPGYDVAGVVVKVGNQVKELKEGDAVYGNINEKALEGPKQFGSLAEYTAVEEKLLALK 193

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKNL F++AA LPLA ETAYEGLER+ FSAGKSILVL GAGGVG++VIQLAKHVFGAS++
Sbjct: 194 PKNLDFIQAAGLPLAIETAYEGLERTGFSAGKSILVLNGAGGVGSLVIQLAKHVFGASRI 253

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AATSST KL+LL+SLGADLAIDYTKEN EDLPEKFDVV+DA+GQCDKA+K VKEGG VV+
Sbjct: 254 AATSSTGKLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDKAVKVVKEGGSVVA 313

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKG 281
           + G+VTPP   FV+TS+G+ L+ LNPY ESGK+K ++DPKG
Sbjct: 314 LTGAVTPPGFRFVVTSNGNTLKTLNPYLESGKIKPVVDPKG 354

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	284
TAIR|locus:2034802	386	AOR "alkenal/one oxidoreductas	0.985	0.725	0.693	2.6e-102
TIGR_CMR|BA_3566	332	BA_3566 "alcohol dehydrogenase	0.809	0.692	0.401	3.2e-43
TIGR_CMR|BA_3438	335	BA_3438 "alcohol dehydrogenase	0.841	0.713	0.382	2.8e-38
TIGR_CMR|BA_3435	317	BA_3435 "alcohol dehydrogenase	0.813	0.728	0.397	1e-36
ZFIN|ZDB-GENE-040426-1314	387	rtn4ip1 "reticulon 4 interacti	0.813	0.596	0.377	1.1e-33
TIGR_CMR|BA_0176	302	BA_0176 "alcohol dehydrogenase	0.911	0.857	0.332	2e-31
TIGR_CMR|CPS_0991	325	CPS_0991 "oxidoreductase, zinc	0.830	0.726	0.360	2.3e-31
TAIR|locus:2086335	366	AT3G15090 [Arabidopsis thalian	0.823	0.639	0.338	3e-30
UNIPROTKB|Q8WWV3	396	RTN4IP1 "Reticulon-4-interacti	0.753	0.540	0.346	7.6e-29
UNIPROTKB|E2QRQ9	397	RTN4IP1 "Uncharacterized prote	0.852	0.609	0.342	3.9e-28

TAIR|locus:2034802 AOR "alkenal/one oxidoreductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
 Identities = 195/281 (69%), Positives = 230/281 (81%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
             MKAWVY +YG    VLK E+N+ VP ++EDQVLIKVVAAALNP+D KR  G F ATDSPL
Sbjct:    78 MKAWVYSDYGGVD-VLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPL 136

Query:    61 PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
             PT+PGYDVAGVV KVGS VK  K GDEVY +++EKAL+ PK+ GSLAEYTAVEE LLALK
Sbjct:   137 PTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALK 196

Query:   121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXX 180
             PKN+ F +AA LPLA ETA EGL R+ FSAGKSILVL GAGGVG++VIQLAKHV+G    
Sbjct:   197 PKNIDFAQAAGLPLAIETADEGLVRTEFSAGKSILVLNGAGGVGSLVIQLAKHVYGASKV 256

Query:   181 XXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
                     L+L+RSLGADLAIDYTKENIEDLP+K+DVVFDA+G CDKA+K +KEGG+VV+
Sbjct:   257 AATASTEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGMCDKAVKVIKEGGKVVA 316

Query:   241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKG 281
             + G+VTPP   FV+TS+G +L+KLNPY ESGKVK ++DPKG
Sbjct:   317 LTGAVTPPGFRFVVTSNGDVLKKLNPYIESGKVKPVVDPKG 357

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0010319 "stromule" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0035671 "enone reductase activity" evidence=IDA

GO:0035798 "2-alkenal reductase (NADP+) activity" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009416 "response to light stimulus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

GO:0015994 "chlorophyll metabolic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019216 "regulation of lipid metabolic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0031408 "oxylipin biosynthetic process" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

TIGR_CMR|BA_3566 BA_3566 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 423 (154.0 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
 Identities = 100/249 (40%), Positives = 143/249 (57%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT-DSP 59
             MKA +  +YG     +     V +P + E +VL ++ AA++NPIDFK   G         
Sbjct:     1 MKAMIIDKYGKVPMRM---AEVPIPEINEHEVLAEIHAASINPIDFKIRDGKVKMLLKYE 57

Query:    60 LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRN--GSLAEYTAVEENLL 117
             +P I G D AGV+ KVGS+V +FK+GDE+Y          P++N  G+ AEY A+ E+ +
Sbjct:    58 MPLILGNDFAGVIIKVGSKVTRFKIGDEIYA--------RPRKNKIGTFAEYIAIHEDDI 109

Query:   118 ALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
             ALKPKNLSF EAAS+PL   T+Y+ L +       + IL+  G+GGVGT  IQLAK + G
Sbjct:   110 ALKPKNLSFEEAASIPLVGLTSYQALHDIMQLQKDQKILIHAGSGGVGTFAIQLAK-IMG 168

Query:   177 XXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG--QCDKALKAVKE 234
                          DL++SLGAD  I+Y  E  E++ + +D VFD +G    +K+   +K 
Sbjct:   169 ATVTTTASEAGP-DLVKSLGADQIINYKTEKFEEILKDYDAVFDTIGGTTLEKSFDIIKS 227

Query:   235 GGRVVSIIG 243
             GG +VS+ G
Sbjct:   228 GGNIVSVSG 236

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

TIGR_CMR|BA_3438 BA_3438 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 377 (137.8 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
 Identities = 99/259 (38%), Positives = 141/259 (54%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
             MKA +   +G+S SV + E  V  P L    VLI V A ++NPID K   GA SA     
Sbjct:     1 MKAQIIHSFGDS-SVFQLE-EVSKPKLLPGHVLIDVKATSVNPIDTKMRSGAVSAVAPEF 58

Query:    61 PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
             P I   DVAG+V +VG  V KFK GDEVYG     A    +  G+LAE+   +  L+A K
Sbjct:    59 PAILHGDVAGIVIEVGEGVSKFKCGDEVYGC----AGGFKETGGALAEFMLADARLIAHK 114

Query:   121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXX 179
             P N++  EAA+LPL   TA+E L +R+   +G+++L+ G  GGVG + IQLAK   G   
Sbjct:   115 PNNITMEEAAALPLVAITAWESLFDRANIKSGQNVLIHGATGGVGHVAIQLAKWA-GANV 173

Query:   180 XXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK----------FDVVFDAVG--QCDK 227
                      +++   LGAD+AI+Y +E++++  ++          F+V+FD VG    D 
Sbjct:   174 FTTASQQNKMEIAHRLGADVAINYKEESVQESVQEYVQKHTNGNGFEVIFDTVGGKNLDN 233

Query:   228 ALKAVKEGGRVVSIIGSVT 246
             + +A    G VV+I    T
Sbjct:   234 SFEAAAVNGTVVTIAARST 252

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

TIGR_CMR|BA_3435 BA_3435 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 99/249 (39%), Positives = 141/249 (56%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS-P 59
             MKA    +YG+ +SVL+ E  ++ P L ++ VLI+V AA +NP+D+K   G      S  
Sbjct:     1 MKAIGLTQYGD-KSVLQ-EIEMQTPLLGDNDVLIEVYAAGVNPVDWKIREGLLQDVISYD 58

Query:    60 LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG--DINEKALDHPKRNGSLAEYTAVEENLL 117
              P + G+DVAGVV  +G  V  FKVGDEVY   DI        +RNG+ AEY AV+E  +
Sbjct:    59 FPLVLGWDVAGVVAAIGKNVTVFKVGDEVYSRPDI--------ERNGTYAEYVAVDEKYV 110

Query:   118 ALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
             A KP+NLSF EAAS+PL   T+++ L + A    G  +L+  G+GG+GT  IQLAK  FG
Sbjct:   111 AKKPRNLSFEEAASIPLVGLTSWQSLVKFANVQKGNKVLIHAGSGGIGTFAIQLAKS-FG 169

Query:   177 XXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CDKALKAVKE 234
                         +  ++ LGAD  +DY  E+   L   +++VFD +G      + K +  
Sbjct:   170 AHVATTTSTKN-MQFVKDLGADTVVDYKTEDFSLLLHNYNIVFDVLGGDVLKDSYKVLAP 228

Query:   235 GGRVVSIIG 243
              G++ SI G
Sbjct:   229 NGKLASIYG 237

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

ZFIN|ZDB-GENE-040426-1314 rtn4ip1 "reticulon 4 interacting protein 1" [Danio rerio (taxid:7955)]

 Score = 332 (121.9 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
 Identities = 102/270 (37%), Positives = 143/270 (52%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATD-- 57
             M AWV  +YG +  VL+F  N  +P +   ++V++KV AA LNPID   M G + A    
Sbjct:    29 MPAWVIDKYGKND-VLRFTKNAALPIIHYPNEVVVKVHAAGLNPIDIS-MRGGYGAATMA 86

Query:    58 ---SPL---------PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGS 105
                 PL         P I G DV+G + + G  VK FK GD+V+  I       P + GS
Sbjct:    87 MKRDPLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIP------PWKQGS 140

Query:   106 LAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE------GLERSAFSAGKSILVLGG 159
             LAE+  V  N ++ KPK+L   EAAS+P    TA+       GL +   SA K +L+LGG
Sbjct:   141 LAEFVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDN-SAKKRVLILGG 199

Query:   160 AGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIE-DLP--EKFD 216
             +GGVGT  IQ+ K  +G              L+R LGAD  +DYT   +E  L   EKFD
Sbjct:   200 SGGVGTFAIQMVK-AWGAHVTVTCSQNAER-LVRDLGADDVVDYTAGPVEKQLKNLEKFD 257

Query:   217 VVFDAVG-QCDK-ALKAVK--EGGRVVSII 242
             ++ D++G + +K AL  +K   G + V++I
Sbjct:   258 LILDSIGGETEKWALDLLKPWSGAKFVTLI 287

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

TIGR_CMR|BA_0176 BA_0176 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 97/292 (33%), Positives = 157/292 (53%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALN-----------PIDFKRM 49
             MKA +  +YG   +VL+ + N+E P  ++++VL+K+ A +++           P+ F   
Sbjct:     1 MKAIICTQYG-PPNVLQLQ-NIEKPIPKKNEVLVKIHATSVSTGDCRIRGFNSPLLFWIP 58

Query:    50 LGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEY 109
             +        P   I G ++AG +E +G+ V +FK GD+++  + E  L      G  AEY
Sbjct:    59 MRLILGLRKPRNPILGVELAGEIEDIGTDVTQFKKGDQIFA-LTELNL------GGYAEY 111

Query:   110 TAVEEN-LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVI 168
             T V E+ L+ LKP N+++ EAA +P    +A   L +S    G+ +L+ G +G VGT  I
Sbjct:   112 TCVHESGLITLKPTNVTYEEAAVIPFGGTSALHFLRKSRIKKGQQVLIYGASGSVGTAAI 171

Query:   169 QLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKA 228
             QLAK+ FG             +L++SLGAD  IDYTKE+     E++D++FDAVG+  K+
Sbjct:   172 QLAKY-FGATVTAVCSNSN-FELVQSLGADKVIDYTKEDFTKRRERYDIIFDAVGKHKKS 229

Query:   229 L--KAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIID 278
             L  + +   G+ VS+ G +       V   D  +L+KL    E+  +K +ID
Sbjct:   230 LCKQVLAPNGKYVSVNGMMAK-----VSKEDMILLKKLT---ETEHLKPVID 273

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

TIGR_CMR|CPS_0991 CPS_0991 "oxidoreductase, zinc-binding" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 318 (117.0 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
 Identities = 93/258 (36%), Positives = 134/258 (51%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP- 59
             MKA + KE G+++ V +     + P  +   ++++V A ++NPID   ML +     S  
Sbjct:     1 MKAMIIKEIGSTE-VFQLAEKAK-PVAKAGHMVVEVKATSVNPID--TMLRSIELPWSAN 56

Query:    60 LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINE-KALDHPKRNGSLAEYTAVEENLLA 118
             LP I   DVAG+V +VG  V  F VGDEVYG       +D     G+LAE+  V+  L+A
Sbjct:    57 LPEILHGDVAGIVCEVGEGVTGFNVGDEVYGMAGGINGVD-----GALAEFMLVDALLMA 111

Query:   119 LKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGX 177
              KPK L+  +AA+LPL   T+YE L E+     G  +L+ G  GGVG + +QLAK V G 
Sbjct:   112 NKPKTLTMKQAAALPLVAITSYEALVEKMNVQQGDKVLIHGATGGVGHIAVQLAK-VLGA 170

Query:   178 XXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK------FDVVFDAVG--QCDKAL 229
                        + L ++LGAD  +DY  E++ D          FD VFD V     +K+ 
Sbjct:   171 NVTSTYSSANEV-LAKTLGADNLVDYKTESVADYVRAYTDGIGFDKVFDTVAGDNIEKSF 229

Query:   230 KAVKEGGRVVSIIGSVTP 247
             +A K  G V +I+    P
Sbjct:   230 EAAKLNGHVATILPIADP 247

GO:0008152 "metabolic process" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

TAIR|locus:2086335 AT3G15090 [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 84/248 (33%), Positives = 136/248 (54%)

Query:     2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP-L 60
             +A +   +G  + V +   NV VP+L  ++VL+K  A ++NP+D +   G   +   P L
Sbjct:    33 RAVILPRFGGPE-VFELRENVPVPNLNPNEVLVKAKAVSVNPLDCRIRAGYGRSVFQPHL 91

Query:    61 PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
             P I G DV+G V  +G+ VK  KVG EV+G ++  AL      G+  +Y  + E+ L  K
Sbjct:    92 PIIVGRDVSGEVAAIGTSVKSLKVGQEVFGALHPTAL-----RGTYTDYGILSEDELTEK 146

Query:   121 PKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGXXX 179
             P ++S VEA+++P A  TA+  L+ +A  + G+ +LV GG G VG   IQLA  V     
Sbjct:   147 PSSISHVEASAIPFAALTAWRALKSNARITEGQRLLVFGGGGAVGFSAIQLA--VASGCH 204

Query:   180 XXXXXXXXXLDLLRSLGADLAIDYTKENIE-DLPEKFDVVFDAVG--QCDK-ALKAVKEG 235
                       D + + GA+ A+DYT E+IE  +  KFD V D +G  + ++  +  +++G
Sbjct:   205 VTASCVGQTKDRILAAGAEQAVDYTTEDIELAVKGKFDAVLDTIGGPETERIGINFLRKG 264

Query:   236 GRVVSIIG 243
             G  +++ G
Sbjct:   265 GNYMTLQG 272

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|Q8WWV3 RTN4IP1 "Reticulon-4-interacting protein 1, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 299 (110.3 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
 Identities = 85/245 (34%), Positives = 126/245 (51%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLG----AFSA 55
             M AWV  +YG ++ VL+F  N+ +P +   ++V++KV AA++NPID     G    A + 
Sbjct:    43 MPAWVIDKYGKNE-VLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNM 101

Query:    56 TDSPL---------PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSL 106
                PL         P   G DV+GVV + G  VK FK GDEV+  +       P + G+L
Sbjct:   102 KRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP------PWKQGTL 155

Query:   107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAG 161
             +E+  V  N ++ KPK+L+  +AASLP    TA+  + +          GK +L+LG +G
Sbjct:   156 SEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASG 215

Query:   162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK---FDVV 218
             GVGT  IQ+ K                 +L+R LGAD  IDY   ++E+  +    FD +
Sbjct:   216 GVGTFAIQVMKA--WDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFI 273

Query:   219 FDAVG 223
              D VG
Sbjct:   274 LDNVG 278

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|E2QRQ9 RTN4IP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 97/283 (34%), Positives = 143/283 (50%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLG----AFSA 55
             M AWV  +YG ++ VL+F  N+ +P +   ++V+IKV AA++NPID     G    A + 
Sbjct:    43 MPAWVIDKYGKNE-VLRFTQNMMIPVIHYPNEVIIKVHAASVNPIDVNMRSGYGATALNM 101

Query:    56 TDSPL---------PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSL 106
                PL         P   G DV+GVV + G  V+ FK GDEV+  +       P + G+L
Sbjct:   102 KRDPLHIKTKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVP------PWKQGTL 155

Query:   107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAG 161
             +E+  V  N ++LKPK+L+  +AASLP    TA+  + +          GK +L+LG +G
Sbjct:   156 SEFVVVNGNEVSLKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASG 215

Query:   162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK---FDVV 218
             GVGT  IQ     +              +L+R LGAD  IDY   N+E+  +    FD +
Sbjct:   216 GVGTFAIQQVMKAWDAHVTAVCSQDAS-ELVRKLGADDVIDYKSGNVEEQLKSLKPFDFI 274

Query:   219 FDAVGQCDK--ALKAVKE--GGRVVSIIGSVTPPASSFVLTSD 257
              D VG   +  AL  +K+  G   V++   VTP    F+L  D
Sbjct:   275 LDNVGGSTETWALNFLKKWSGATYVTL---VTP----FLLNMD 310

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZUC1	QORL_ARATH	1, ., -, ., -, ., -	0.7295	0.9859	0.7253	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.1.1	LOW CONFIDENCE prediction!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_XVI000502 hypothetical protein (309 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	284
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	7e-99
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	1e-83
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	8e-83
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	3e-69
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	1e-68
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	2e-59
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	2e-58
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	3e-58
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	1e-54
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	8e-54
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-53
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	2e-53
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	1e-52
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	4e-47
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-45
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	6e-43
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	1e-42
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	3e-42
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	3e-41
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	3e-41
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	6e-40
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	2e-39
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	3e-39
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	9e-39
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	5e-38
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	2e-37
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	7e-37
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	9e-37
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	3e-36
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	7e-36
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	2e-35
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	7e-35
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	3e-34
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	1e-32
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	7e-32
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	1e-31
smart00829	287	smart00829, PKS_ER, Enoylreductase	1e-31
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	7e-31
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	1e-29
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	2e-29
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	4e-28
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	6e-28
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	3e-27
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	7e-27
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	2e-26
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	4e-26
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	5e-26
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	2e-25
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	3e-25
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	6e-25
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	2e-24
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	2e-24
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	2e-24
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	3e-24
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	4e-24
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	1e-23
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	5e-23
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	5e-23
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	3e-22
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	5e-22
cd05281	341	cd05281, TDH, Threonine dehydrogenase	4e-21
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	5e-21
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	3e-20
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	4e-20
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	4e-18
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	5e-18
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	1e-17
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	1e-17
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	2e-17
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	3e-17
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	8e-17
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	1e-16
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	1e-16
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	3e-16
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	7e-16
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	9e-16
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	2e-15
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	2e-15
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	2e-15
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	3e-15
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	5e-15
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	9e-15
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	1e-14
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	4e-14
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	2e-13
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	2e-12
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	9e-12
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	3e-11
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	1e-10
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	1e-10
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	2e-10
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	2e-10
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	7e-10
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	1e-09
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	2e-09
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	3e-09
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	6e-09
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	7e-09
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	1e-08
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	2e-08
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	7e-08
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	1e-07
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	2e-06
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	3e-06
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	3e-06
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	4e-06
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	5e-06
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	8e-06
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	5e-05
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	5e-05
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	6e-05
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	1e-04
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	1e-04
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	6e-04
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	0.001
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	0.002

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  291 bits (748), Expect = 7e-99
 Identities = 128/293 (43%), Positives = 160/293 (54%), Gaps = 25/293 (8%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS-ATDSP 59
           MKA    EYG    VL+   +V  P     +VL+KV AA +NP+D K   G    A    
Sbjct: 1   MKAVRIHEYGGP-EVLE-LADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLT 58

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
           LP IPG+DVAGVV  VG  V  FKVGDEV+G           R G+ AEY  V  + LAL
Sbjct: 59  LPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFT------RGGAYAEYVVVPADELAL 112

Query: 120 KPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGAS 178
           KP NLSF EAA+LPLA  TA++ L       AG+++L+ G AGGVG+  +QLAK   GA 
Sbjct: 113 KPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKA-RGA- 170

Query: 179 KVAATSSTAKLDLLRSLGADLAIDYTKENIE--DLPEKFDVVFDAVGQ--CDKALKAVKE 234
           +V AT+S A  D LRSLGAD  IDYTK + E    P   D V D VG     ++L  VK 
Sbjct: 171 RVIATASAANADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGETLARSLALVKP 230

Query: 235 GGRVVSIIGSVTPP---------ASSFVLTSDGSILEKLNPYFESGKVKAIID 278
           GGR+VSI G              A    +  DG  L +L    E+GK++ ++D
Sbjct: 231 GGRLVSIAGPPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVD 283

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  253 bits (649), Expect = 1e-83
 Identities = 120/301 (39%), Positives = 163/301 (54%), Gaps = 34/301 (11%)

Query: 4   WVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFK-RMLGAFSATDSPLPT 62
            VY  YG+ + +L  E  V +P+ +  +VL+KV AA++NP+D+K R          P P 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 63  IPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPK 122
           IPG D AG V  VGS V +FKVGDEV+G +       PK  G+LAEY    E+ LA KP+
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEVFGRLP------PKGGGALAEYVVAPESGLAKKPE 114

Query: 123 NLSFVEAASLPLATETAYEGLERSAFS-AGKSILVLGGAGGVGTMVIQLAKHVFGASKVA 181
            +SF EAA+LP+A  TA + L  +     G+ +L+ G +GGVGT  +Q+AK   GA  V 
Sbjct: 115 GVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKA-LGA-HVT 172

Query: 182 ATSSTAKLDLLRSLGADLAIDYTKENIEDL---PEKFDVVFDAVGQCD----KALKAVKE 234
              ST   +L+RSLGAD  IDYT E+   L    EK+DV+FDAVG       +A  A+K 
Sbjct: 173 GVCSTRNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKP 232

Query: 235 GGRVVSIIGSVTPPASS-----------------FVLTSDGSILEKLNPYFESGKVKAII 277
           GGR VS+ G  +                      F+   +   LE+L    E GK+K +I
Sbjct: 233 GGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPVI 292

Query: 278 D 278
           D
Sbjct: 293 D 293

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  251 bits (644), Expect = 8e-83
 Identities = 133/308 (43%), Positives = 171/308 (55%), Gaps = 37/308 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V + +G    V +    V  P     QVL++V A+ +NP+D K   G  +A   PL
Sbjct: 1   MKALVLESFGGP-EVFE-LREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARP-PL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P I G DVAGVVE VG  V +F+VGDEVYG             GSLAEY  V+  LLALK
Sbjct: 58  PAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLG----GLQGSLAEYAVVDARLLALK 113

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P NLS  EAA+LPL   TA+EGL +R+A  AG+++L+ GGAGGVG + +QLAK   GA +
Sbjct: 114 PANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKA-AGA-R 171

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK-----FDVVFDAVG--QCDKALKAV 232
           V AT+S+ K    RSLGAD  I Y +  +E + E      FDVVFD VG    D + +AV
Sbjct: 172 VYATASSEKAAFARSLGADPIIYYRETVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAV 231

Query: 233 KEGGRVVSIIGSVT---PPAS------SFVLTSD-----------GSILEKLNPYFESGK 272
              GRVVSI+G  T    P S      S V T             G IL +     E G+
Sbjct: 232 ALYGRVVSILGGATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQ 291

Query: 273 VKAIIDPK 280
           ++ ++DP+
Sbjct: 292 LRPLLDPR 299

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  217 bits (554), Expect = 3e-69
 Identities = 120/307 (39%), Positives = 150/307 (48%), Gaps = 39/307 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V +E+G    VLK    V  P     +VL++V AA +NPID     G       PL
Sbjct: 1   MKAVVVEEFG-GPEVLKVVE-VPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVR-PL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P IPG + AGVV  VGS V  FKVGD V       AL    R+G  AEY  V  + L   
Sbjct: 58  PFIPGSEAAGVVVAVGSGVTGFKVGDRVA------ALGGVGRDGGYAEYVVVPADWLVPL 111

Query: 121 PKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P  LSF EAA+LPLA  TA+  L   A    G+++LV G AGGVG+  IQLAK   GA+ 
Sbjct: 112 PDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKA-LGATV 170

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVG--QCDKALKA 231
           VA  SS+ KL+LL+ LGAD  I+Y +E+  +        +  DVV D VG      +L A
Sbjct: 171 VAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAA 230

Query: 232 VKEGGRVVSIIGSVTPPASSFVLTS--------------------DGSILEKLNPYFESG 271
           +  GGR+VSI      P     L                          L +L     SG
Sbjct: 231 LAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASG 290

Query: 272 KVKAIID 278
           K+K +ID
Sbjct: 291 KLKPVID 297

Length = 326

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score =  216 bits (552), Expect = 1e-68
 Identities = 113/266 (42%), Positives = 148/266 (55%), Gaps = 33/266 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLRE-DQVLIKVVAAALNPID-------------F 46
           MKAW    YG   S+L  E N  +P +R+ +QVLIKV AA++NPID              
Sbjct: 1   MKAWQIHSYGGIDSLLLLE-NARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNK 59

Query: 47  KRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSL 106
           KR   +   +    P   G D +GVV  +GS VK F++GDEV+G +       P   G+ 
Sbjct: 60  KRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAV------PPWSQGTH 113

Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-----FSAGKSILVLGGAG 161
           AEY  V EN ++ KPKNLS  EAASLP A  TA+  L          +AGK +L+LGG+G
Sbjct: 114 AEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSG 173

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED---LPEKFDVV 218
           GVGT  IQL K  +GA  V  T ST  + L++SLGAD  IDY  E+ E+      KFDV+
Sbjct: 174 GVGTFAIQLLKA-WGA-HVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVI 231

Query: 219 FDAVGQCD--KALKAVKEGGRVVSII 242
            D VG      ALK +K+GG  V+++
Sbjct: 232 LDTVGGDTEKWALKLLKKGGTYVTLV 257

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  192 bits (489), Expect = 2e-59
 Identities = 95/262 (36%), Positives = 127/262 (48%), Gaps = 32/262 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA V    G    V+    +V VP    D+VL+KV A ALNP+D+K     F       
Sbjct: 1   QKAAVLTGPGGGLLVVV---DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFI---PSY 54

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P I G D AG V +VGS V +FKVGD V G ++     +  RNG+  EY   + +L A  
Sbjct: 55  PAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHG-GNPNDPRNGAFQEYVVADADLTAKI 113

Query: 121 PKNLSFVEAASLPLATETAYEGL-----------ERSAFSAGKSILVLGGAGGVGTMVIQ 169
           P N+SF EAA+LP+   TA   L           + S  S GK +L+ GG+  VGT+ IQ
Sbjct: 114 PDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQ 173

Query: 170 LAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVG- 223
           LAK      KV  T+S    DL++SLGAD   DY   ++ +        K     D +  
Sbjct: 174 LAKLAGY--KVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCIST 231

Query: 224 -----QCDKALKAVKEGGRVVS 240
                 C +AL     GG++VS
Sbjct: 232 PESAQLCAEALGRSG-GGKLVS 252

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  189 bits (482), Expect = 2e-58
 Identities = 99/259 (38%), Positives = 132/259 (50%), Gaps = 25/259 (9%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWV  +   +   L  E  +E+P     +VL+KV AA LNP+D+K +     A     
Sbjct: 1   MKAWVLPK-PGAALQLTLEE-IEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA--WSY 56

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVY--GDINEKALDHPKRNGSLAEYTAVEENLLA 118
           P +PG D AGVV  VG++V  +KVGD V     +         R GS AEYT V+   + 
Sbjct: 57  PHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASL--------ARGGSFAEYTVVDARAVL 108

Query: 119 LKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGA 177
             P +LSF EAA+LP A  TAY+ L +     AG++IL+ GGAGGVG+  +QLAK   G 
Sbjct: 109 PLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKR-AGL 167

Query: 178 SKVAATSSTAKLDLLRSLGADLAIDYTKEN-IEDLPE-----KFDVVFDAVGQCDKA--L 229
            +V  T S    + ++SLGAD  IDY  E+  E + E       D V D VG    A   
Sbjct: 168 -RVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALA 226

Query: 230 KAVKEGGRVVSIIGSVTPP 248
             +   G +V I G     
Sbjct: 227 PTLAFNGHLVCIQGRPDAS 245

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score =  188 bits (481), Expect = 3e-58
 Identities = 97/264 (36%), Positives = 138/264 (52%), Gaps = 28/264 (10%)

Query: 1   MKAWVYKEYGNSQSVLKFET-NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP 59
           MKA  + +              +  P      +L++V A ++NP+D K   G   A    
Sbjct: 1   MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGG--APVPG 58

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVY--GDINEKALDHPKRNGSLAEYTAVEENLL 117
            P I G+D +GVVE VGS+V  FKVGDEVY  GDI         R GS AEY  V+E ++
Sbjct: 59  QPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDIT--------RPGSNAEYQLVDERIV 110

Query: 118 ALKPKNLSFVEAASLPLATETAYEGL------ERSAFSAGKSILVLGGAGGVGTMVIQLA 171
             KPK+LSF EAA+LPL + TA+E L         A + GK++L++GGAGGVG++ IQLA
Sbjct: 111 GHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLA 170

Query: 172 KHVFGASKVAATSSTAK-LDLLRSLGADLAIDYTK---ENIEDLP-EKFDVVF---DAVG 223
           K + G   V AT+S  + +  ++ LGAD  I++ +   E +E L  E  D +F   D   
Sbjct: 171 KQLTGL-TVIATASRPESIAWVKELGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQ 229

Query: 224 QCDKALKAVKEGGRVVSIIGSVTP 247
             D   + +   G +  I+    P
Sbjct: 230 HWDAMAELIAPQGHICLIVDPQEP 253

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score =  179 bits (457), Expect = 1e-54
 Identities = 106/317 (33%), Positives = 150/317 (47%), Gaps = 59/317 (18%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V KE G  + VL+    V  P+    +VLI+V AA +N  D  +  G +     P 
Sbjct: 1   MKAIVIKEPGGPE-VLELGE-VPKPAPGPGEVLIRVAAAGVNRADLLQRQGLY-----PP 53

Query: 61  P----TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENL 116
           P     I G +VAGVV  VG  V  +KVGD V   +           G  AEY  V    
Sbjct: 54  PPGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALLA---------GGGYAEYVVVPAGQ 104

Query: 117 LALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF 175
           L   P+ LS VEAA+LP    TA++ L +     AG+++L+ GGA GVGT  IQLAK   
Sbjct: 105 LLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKA-L 163

Query: 176 GASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVGQ--CD 226
           GA +V AT+ +  KL+  R+LGAD+AI+Y  E+  +  ++       DV+ D VG     
Sbjct: 164 GA-RVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLA 222

Query: 227 KALKAVKEGGRVV----------------------SIIGSV---TPPASSFVLTSDGSIL 261
           + L+A+   GR+V                      ++ GS            L +     
Sbjct: 223 RNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAA--FR 280

Query: 262 EKLNPYFESGKVKAIID 278
           E + P F SG+++ +ID
Sbjct: 281 EHVWPLFASGRIRPVID 297

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  177 bits (452), Expect = 8e-54
 Identities = 112/324 (34%), Positives = 151/324 (46%), Gaps = 56/324 (17%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPID-FKRMLGAFSATDSP 59
           MKA V + +G  + VL++   +  P    D+VL++V AAALN +D + R          P
Sbjct: 1   MKAVVIRGHGGPE-VLEYGD-LPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI--KLP 56

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEV--YGDIN----EKALD--------------H 99
           LP I G D AGVVE VG  V   K G  V  Y  I+    E  L               H
Sbjct: 57  LPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEH 116

Query: 100 PKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLG 158
              +G  AEY AV    L   P NLSF EAA+ PL   TA+  L  R+    G+++LV G
Sbjct: 117 --VDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHG 174

Query: 159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF--- 215
              GVG+  IQ+AK  FGA+ +A   S  KL+  + LGAD  IDY KE+      +    
Sbjct: 175 AGSGVGSAAIQIAKL-FGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGK 233

Query: 216 ---DVVFDAVGQC--DKALKAVKEGGRVVSIIGSVT---PPAS-------------SFVL 254
              DVV + VG    +K+LK++  GGR+V   G+ T    P               S + 
Sbjct: 234 RGVDVVVEHVGAATWEKSLKSLARGGRLV-TCGATTGYEAPIDLRHVFWRQLSILGSTMG 292

Query: 255 TSDGSILEKLNPYFESGKVKAIID 278
           T     L++       GK+K +ID
Sbjct: 293 TKAE--LDEALRLVFRGKLKPVID 314

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  174 bits (444), Expect = 2e-53
 Identities = 87/235 (37%), Positives = 116/235 (49%), Gaps = 28/235 (11%)

Query: 31  QVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG 90
           +VL++V AA L   D     G +      LP I G++ AGVV +VG  V   KVGD V  
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPP-KLPLILGHEGAGVVVEVGPGVTGVKVGDRVVV 59

Query: 91  DIN--------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT 136
             N                 +     +G  AEY  V  + L   P  LS  EAA LP   
Sbjct: 60  LPNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPL 119

Query: 137 ETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRS 194
            TAY  L R+     G ++LVL GAGGVG +  QLAK   GA +V  T  +  KL+L + 
Sbjct: 120 ATAYHALRRAGVLKPGDTVLVL-GAGGVGLLAAQLAKA-AGA-RVIVTDRSDEKLELAKE 176

Query: 195 LGADLAIDYTKENIEDL-----PEKFDVVFDAVGQCD---KALKAVKEGGRVVSI 241
           LGAD  IDY +E++E+          DVV DAVG  +   +AL+ ++ GGR+V +
Sbjct: 177 LGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVV 231

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  175 bits (447), Expect = 2e-53
 Identities = 91/259 (35%), Positives = 132/259 (50%), Gaps = 18/259 (6%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A  Y E+G    VL+   ++ VP+    +VL++V A+ +NP+D     GA+     PL
Sbjct: 1   MRAIRYHEFGAP-DVLR-LGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAY-PGLPPL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P +PG D AGVVE VG  V   KVGD V+       L   +R G+ AEY  V  + L   
Sbjct: 58  PYVPGSDGAGVVEAVGEGVDGLKVGDRVWL----TNLGWGRRQGTAAEYVVVPADQLVPL 113

Query: 121 PKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P  +SF + A+L +   TAY  L   A   AG+++LV GG+G VG   +QLA+   GA  
Sbjct: 114 PDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARW-AGARV 172

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFD--AVGQCDKALKA 231
           +A  SS    +L+R  GAD   +Y  E++ D        +  DV+ +  A     K L  
Sbjct: 173 IATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDV 232

Query: 232 VKEGGRVVSIIGSVTPPAS 250
           +  GGR+V + GS     +
Sbjct: 233 LAPGGRIV-VYGSGGLRGT 250

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  174 bits (443), Expect = 1e-52
 Identities = 101/253 (39%), Positives = 127/253 (50%), Gaps = 28/253 (11%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V KE G     L  E     P     +V I+V AA +N  D   + G +     PL
Sbjct: 1   MKAVVCKELG-GPEDLVLEEVPPEPGA-PGEVRIRVEAAGVNFPDLLMIQGKYQVKP-PL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P +PG +VAGVVE VG  V  FKVGD V               G  AE   V    +   
Sbjct: 58  PFVPGSEVAGVVEAVGEGVTGFKVGDRVVA-----LTGQ----GGFAEEVVVPAAAVFPL 108

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P  LSF EAA+LP+   TAY  L  R+    G+++LVLG AGGVG   +QLAK   GA  
Sbjct: 109 PDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKA-LGARV 167

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF---------DVVFDAVGQ--CDKA 228
           +AA SS  KL L R+LGAD  IDY      DL E+          DVV+D VG    + +
Sbjct: 168 IAAASSEEKLALARALGADHVIDYRD---PDLRERVKALTGGRGVDVVYDPVGGDVFEAS 224

Query: 229 LKAVKEGGRVVSI 241
           L+++  GGR++ I
Sbjct: 225 LRSLAWGGRLLVI 237

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  160 bits (407), Expect = 4e-47
 Identities = 101/316 (31%), Positives = 144/316 (45%), Gaps = 50/316 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V K++G    +      V VP     +VLIKV A  +   D     G +      L
Sbjct: 4   MKAAVLKKFGQPLEI----EEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDW--PVPKL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------Y---GDINEKALDHPK--- 101
           P IPG+++ G V +VG  V   KVGD V             Y   G  NE    + K   
Sbjct: 58  PLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSG--NENLCPNQKITG 115

Query: 102 --RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
              +G  AEY  V    +   P+ L   EAA L  A  T Y  L+++    GK + V+ G
Sbjct: 116 YTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANVKPGKWVAVV-G 174

Query: 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IEDLPEKFDVV 218
           AGG+G M +Q AK   GA  +A T S  KL+L + LGAD  I+ +  + +E + E  D +
Sbjct: 175 AGGLGHMAVQYAK-AMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAI 233

Query: 219 FDAVGQ--CDKALKAVKEGGRVVSIIGSV----TPPASSFVLTSD-----GSI------L 261
            D VG    + +LKA++ GG +V ++G       P   +F+L        GS+      L
Sbjct: 234 IDTVGPATLEPSLKALRRGGTLV-LVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADL 292

Query: 262 EKLNPYFESGKVKAII 277
           E+   +   GK+K  I
Sbjct: 293 EEALDFAAEGKIKPEI 308

Length = 339

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  156 bits (396), Expect = 1e-45
 Identities = 92/280 (32%), Positives = 125/280 (44%), Gaps = 32/280 (11%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAW     G     LK      VP     +VL++V A +LN  D   + G +       
Sbjct: 1   MKAWRLSG-GGGLDNLKLVE-EPVPEPGPGEVLVRVHAVSLNYRDLLILNGRY-PPPVKD 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV---------YGDINEKALDH---PKRNGSLAE 108
           P IP  D AG V  VG  V +FKVGD V          G    +          +G LAE
Sbjct: 58  PLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAE 117

Query: 109 YTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMV 167
           Y  + E  L   P +LSF EAA+LP A  TA+  L        G ++LV  G GGV    
Sbjct: 118 YVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQ-GTGGVSLFA 176

Query: 168 IQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK---------FDVV 218
           +Q AK   GA  +A +SS  KL+  ++LGAD  I+Y      D  E+          D V
Sbjct: 177 LQFAK-AAGARVIATSSSDEKLERAKALGADHVINYRTT--PDWGEEVLKLTGGRGVDHV 233

Query: 219 FDAVGQC--DKALKAVKEGGRVVSIIGSVTPPASSFVLTS 256
            +  G     +++KAV  GG V+S+IG ++   +  +L  
Sbjct: 234 VEVGGPGTLAQSIKAVAPGG-VISLIGFLSGFEAPVLLLP 272

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score =  149 bits (379), Expect = 6e-43
 Identities = 96/326 (29%), Positives = 141/326 (43%), Gaps = 63/326 (19%)

Query: 9   YGNSQSVLKFETNVEVP---SLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPG 65
           + N+ S L   T +++P     +++++++KV AAALNP+D K               + G
Sbjct: 6   FKNNTSPLT-ITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGL-G 63

Query: 66  YDVAGVVEKVGSQVKK-FKVGDEVYGDINEKALDHP-KRNGSLAEY----TAVEENLLAL 119
            D +GV+ KVGS V   +KVGDEV G        HP    G+L++Y       ++  +  
Sbjct: 64  RDYSGVIVKVGSNVASEWKVGDEVCG-----IYPHPYGGQGTLSQYLLVDPKKDKKSITR 118

Query: 120 KPKNLSFVEAASLPLATETAYEGLE--RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA 177
           KP+N+S  EAA+ PL   TAY+ LE           +LVLGG+  VG   IQLAK+ +  
Sbjct: 119 KPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNI 178

Query: 178 SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----------PEKFDVVFDAVG---- 223
             V  T S+   +L + LGAD  IDY   +   L            KFD++ D VG    
Sbjct: 179 GTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDL 238

Query: 224 --QCDKALKAVKEGGRVVSIIG-----------SVTPPASSFV----------------- 253
               +  LK   + G  V+I+G           +     S+                   
Sbjct: 239 FPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFF 298

Query: 254 -LTSDGSILEKLNPYFESGKVKAIID 278
            L  +   +EK       GKVK  ID
Sbjct: 299 LLDPNADWIEKCAELIADGKVKPPID 324

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  148 bits (375), Expect = 1e-42
 Identities = 92/263 (34%), Positives = 131/263 (49%), Gaps = 22/263 (8%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPID--FKRMLGAFSATDS 58
           M+A  + ++G    VL+ E  + VP+    +VLI+V A  LN  D  F+R  GA+     
Sbjct: 1   MRAVRFHQFGGP-EVLRIEE-LPVPAPGAGEVLIRVEAIGLNRADAMFRR--GAYIE-PP 55

Query: 59  PLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLA 118
           PLP   GY+ AGVVE VG+ V  F VGD V    +        + G+ AEY  V    + 
Sbjct: 56  PLPARLGYEAAGVVEAVGAGVTGFAVGDRV----SVIPAADLGQYGTYAEYALVPAAAVV 111

Query: 119 LKPKNLSFVEAASLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGA 177
             P  LSFVEAA+L +   TAY  L   A    G S+L+   +  VG   IQ+A    GA
Sbjct: 112 KLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAA-GA 170

Query: 178 SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVG--QCDKAL 229
           + +A T ++ K D L +LGA   I   +E++     +       DVVFD VG  Q  K  
Sbjct: 171 TVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLA 230

Query: 230 KAVKEGGRVVSIIGSVTPPASSF 252
            A+  GG +V + G+++   + F
Sbjct: 231 DALAPGGTLV-VYGALSGEPTPF 252

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score =  147 bits (372), Expect = 3e-42
 Identities = 91/254 (35%), Positives = 127/254 (50%), Gaps = 30/254 (11%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA    E G  + VL     V +P  +  +VLI+V AA +N  D  +  G +     P 
Sbjct: 1   MKAIEITEPGGPE-VLVLVE-VPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKY-----PP 53

Query: 61  P----TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENL 116
           P     I G +VAG V  VG  V ++KVGD V   +           G  AEY AV    
Sbjct: 54  PPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCALVA---------GGGYAEYVAVPAGQ 104

Query: 117 LALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF 175
           +   P+ LS VEAA+LP    T +  L +R    AG+++L+ GGA G+GT  IQLAK  F
Sbjct: 105 VLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAK-AF 163

Query: 176 GASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IEDLPEK-----FDVVFDAVGQ--CDK 227
           GA       S  K     +LGAD+AI+Y +E+ +E +  +      DV+ D VG    ++
Sbjct: 164 GARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNR 223

Query: 228 ALKAVKEGGRVVSI 241
            +KA+   GR+V I
Sbjct: 224 NIKALALDGRIVQI 237

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  144 bits (366), Expect = 3e-41
 Identities = 87/254 (34%), Positives = 121/254 (47%), Gaps = 34/254 (13%)

Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLP 61
           KA    + G    VL++E  V VP     +VL++  A  +N ID     G +     PLP
Sbjct: 1   KAVRIHKTGGP-EVLEYED-VPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL---PLP 55

Query: 62  TIPGYDVAGVVEKVGSQVKKFKVGDEV-YGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
            + G + AGVVE VG  V  FKVGD V Y              G+ AEY  V  + L   
Sbjct: 56  FVLGVEGAGVVEAVGPGVTGFKVGDRVAYAGP----------PGAYAEYRVVPASRLVKL 105

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFS--AGKSILVLGGAGGVGTMVIQLAKHVFGAS 178
           P  +S   AA+L L   TA+  L R  +    G ++LV   AGGVG ++ Q AK   GA+
Sbjct: 106 PDGISDETAAALLLQGLTAH-YLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKA-LGAT 163

Query: 179 KVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK---------FDVVFDAVGQ--CDK 227
            +   SS  K +L R+ GAD  I+Y     ED  E+          DVV+D VG+   + 
Sbjct: 164 VIGTVSSEEKAELARAAGADHVINYRD---EDFVERVREITGGRGVDVVYDGVGKDTFEG 220

Query: 228 ALKAVKEGGRVVSI 241
           +L +++  G +VS 
Sbjct: 221 SLDSLRPRGTLVSF 234

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  144 bits (366), Expect = 3e-41
 Identities = 86/252 (34%), Positives = 119/252 (47%), Gaps = 24/252 (9%)

Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPID-FKRMLGAFSATDSPL 60
           +A V   +G     LK E    +P     +V ++V A  LN  D   R  G + +     
Sbjct: 1   RAVVLTGFG-GLDKLKVEKE-ALPEPSSGEVRVRVEACGLNFADLMARQ-GLYDSA-PKP 56

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P +PG++ AG VE VG  VK FKVGD V G      L    R G  AE   V  + +   
Sbjct: 57  PFVPGFECAGTVEAVGEGVKDFKVGDRVMG------LT---RFGGYAEVVNVPADQVFPL 107

Query: 121 PKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P  +SF EAA+ P+   TAY  L        G+S+LV   AGGVG    QL K V   + 
Sbjct: 108 PDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVT- 166

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQCD--KALKAV 232
           V  T+S +K + L+  G    IDY  ++  +      PE  D+V DA+G  D  K+   +
Sbjct: 167 VVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLL 226

Query: 233 KEGGRVVSIIGS 244
           K  GR+V + G+
Sbjct: 227 KPMGRLV-VYGA 237

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  140 bits (356), Expect = 6e-40
 Identities = 93/263 (35%), Positives = 139/263 (52%), Gaps = 35/263 (13%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V+++ G     LK E +V+ P     +VLI+V  A +NP+D+  ++ A      P+
Sbjct: 1   MKALVFEKSGIEN--LKVE-DVKDPKPGPGEVLIRVKMAGVNPVDY-NVINAVKV--KPM 54

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV--YGDI-----------NEKALDHPKR----- 102
           P IPG + AGVVE+VG  VK  K GD V  Y  +           NE    +        
Sbjct: 55  PHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVS 114

Query: 103 NGSLAEYTAVEE-NLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
           NG  AEY  V E NL  + P ++S   AASLP+A  TAY  L+ +    G++++V G +G
Sbjct: 115 NGGYAEYIVVPEKNLFKI-PDSISDELAASLPVAALTAYHALKTAGLGPGETVVVFGASG 173

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK--ENIEDLPEKFDVVF 219
             G   +QLAK + GA +V A S     D L+  GAD  +DY +  E ++++ +  DVV 
Sbjct: 174 NTGIFAVQLAK-MMGA-EVIAVSRK---DWLKEFGADEVVDYDEVEEKVKEITKMADVVI 228

Query: 220 DAVGQC--DKALKAVKEGGRVVS 240
           +++G    D +L  +  GGR+V+
Sbjct: 229 NSLGSSFWDLSLSVLGRGGRLVT 251

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  139 bits (354), Expect = 2e-39
 Identities = 116/329 (35%), Positives = 149/329 (45%), Gaps = 70/329 (21%)

Query: 1   MKAWVYKEYGNSQSVLKFE-TNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP 59
           MKA VY+  G        E   V VP    D+VLIKV A  +   D     G F A    
Sbjct: 1   MKALVYEGPGE------LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAA--- 51

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINE-------------------KALDHP 100
            P +PG++ AGVV  VGS+V  FKVGD V  D N                     A+   
Sbjct: 52  PPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV- 110

Query: 101 KRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGG 159
            RNG  AEY  V    +   P NLSF EAA   PL+   A  GL+      G S+LV G 
Sbjct: 111 TRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSC--AVHGLDLLGIKPGDSVLVFG- 167

Query: 160 AGGVGTMVIQLAKHVFGASKVA-ATSSTAKLDLLRSLGADLAIDYTKENI----EDLPEK 214
           AG +G ++ QL K   GAS+V  A  +  KL+L + LGA   +D ++E+     ED P  
Sbjct: 168 AGPIGLLLAQLLKLN-GASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYG 226

Query: 215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASSFV----------LTSDGSIL 261
           FDVV +A G     ++A++  + GG V+  +  V  P +             LT  GS  
Sbjct: 227 FDVVIEATGVPKTLEQAIEYARRGGTVL--VFGVYAPDARVSISPFEIFQKELTIIGSF- 283

Query: 262 EKLNPY--------FESGKVKAIIDPKGL 282
             +NPY         ESGK    ID KGL
Sbjct: 284 --INPYTFPRAIALLESGK----IDVKGL 306

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  139 bits (352), Expect = 3e-39
 Identities = 101/315 (32%), Positives = 143/315 (45%), Gaps = 43/315 (13%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA +          L+ E  V  P     +VLIKV AA +   D     G F       
Sbjct: 1   MKAAILH---KPNKPLQIE-EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR--GKY 54

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINE------------------KALDHPKR 102
           P I G+++ G VE+VG  V++FK GD V                        +A    + 
Sbjct: 55  PLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEV 114

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGG 162
           +G  AEY  V E  L   P N+S   AA       TA   L+R+    G ++LV G  GG
Sbjct: 115 DGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKRAGVKKGDTVLVTGAGGG 174

Query: 163 VGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE-DLPEKFDVVFDA 221
           VG   IQLAK   GA  +A T S  KL +L+ LGAD  ID +K + +       DVV + 
Sbjct: 175 VGIHAIQLAK-ALGARVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKKLGGADVVIEL 233

Query: 222 VG--QCDKALKAVKEGGRVVSIIGSVTP------PASSFV--LTSDGSI------LEKLN 265
           VG    +++L+++ +GGR+V +IG+VTP      P    +  +   GSI      +E+  
Sbjct: 234 VGSPTIEESLRSLNKGGRLV-LIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEAL 292

Query: 266 PYFESGKVKAIIDPK 280
              + GK+K +ID  
Sbjct: 293 KLVKEGKIKPVIDRV 307

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  138 bits (350), Expect = 9e-39
 Identities = 82/268 (30%), Positives = 129/268 (48%), Gaps = 42/268 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V    G+    L++E ++  P     +VL+KV A  +   D  R LG  +      
Sbjct: 1   MKALVLTGPGD----LRYE-DIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAY---HP 52

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV------------YGDINEKAL-DH-----PKR 102
           P + G++ +G VE+VGS V    VGD V            Y    E +L  +      +R
Sbjct: 53  PLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRR 112

Query: 103 NGSLAEYTAV-EENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGA 160
           +G+ AEY +V   NL+ + P ++ + EAA + P A   A   +  +  + G +++V+ GA
Sbjct: 113 DGAFAEYVSVPARNLIKI-PDHVDYEEAAMIEPAA--VALHAVRLAGITLGDTVVVI-GA 168

Query: 161 GGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEK----- 214
           G +G + IQ  K   GA +V A      KL + R LGAD  I+  +E++E + E      
Sbjct: 169 GTIGLLAIQWLKI-LGAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRG 227

Query: 215 FDVVFDAVGQCD---KALKAVKEGGRVV 239
            D+V +A G      +AL   + GG+VV
Sbjct: 228 ADLVIEAAGSPATIEQALALARPGGKVV 255

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score =  136 bits (344), Expect = 5e-38
 Identities = 74/196 (37%), Positives = 115/196 (58%), Gaps = 18/196 (9%)

Query: 18  FETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS 77
            + ++  P      +L++V A ++NP+D K  + A  A ++  P I G+D AGVV  VG 
Sbjct: 18  VDIDLPKPKPGGRDLLVEVKAISVNPVDTK--VRARMAPEAGQPKILGWDAAGVVVAVGD 75

Query: 78  QVKKFKVGDEVY--GDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA 135
           +V  FK GDEV+  GDI+        R GS AE+  V+E ++  KPK+LSF EAA+LPL 
Sbjct: 76  EVTLFKPGDEVWYAGDID--------RPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLT 127

Query: 136 TETAYE------GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL 189
           + TA+E      G+        +++L++GGAGGVG+++IQLA+ + G + +A  S     
Sbjct: 128 SITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQ 187

Query: 190 DLLRSLGADLAIDYTK 205
           + +  LGA   ID++K
Sbjct: 188 EWVLELGAHHVIDHSK 203

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  135 bits (342), Expect = 2e-37
 Identities = 82/274 (29%), Positives = 118/274 (43%), Gaps = 37/274 (13%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP- 59
           M+A +   +G     L +  +V VP+    +VLI+V A  +N  D     G +S      
Sbjct: 1   MRAVLLTGHGGLD-KLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGA 59

Query: 60  -----------------LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPK- 101
                             P I G D+ G V  VG  V   ++G+ V  D + +       
Sbjct: 60  TDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDP 119

Query: 102 ---------RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGK 152
                    R+G  AEYT V           LS VE A+ P +  TA   LER+   AG+
Sbjct: 120 ADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLERAGVGAGE 179

Query: 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL- 211
           ++LV G +GGVG+ ++QLAK       V A +  AK + +R+LGAD  I      + D  
Sbjct: 180 TVLVTGASGGVGSALVQLAKRRGA--IVIAVAGAAKEEAVRALGADTVILRDAPLLADAK 237

Query: 212 ---PEKFDVVFDAVG--QCDKALKAVKEGGRVVS 240
               E  DVV D VG       L+ ++ GGR V+
Sbjct: 238 ALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVT 271

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score =  132 bits (334), Expect = 7e-37
 Identities = 76/224 (33%), Positives = 107/224 (47%), Gaps = 28/224 (12%)

Query: 30  DQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVY 89
           D+V ++V AA LN  D    LG     ++PL    G + +G+V +VGS V   KVGD V 
Sbjct: 1   DEVEVEVKAAGLNFRDVLVALGLLPGDETPL----GLECSGIVTRVGSGVTGLKVGDRVM 56

Query: 90  GDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-F 148
           G             G+ A +  V+  L+   P +LSF EAA+LP+A  TAY  L   A  
Sbjct: 57  GLA----------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARL 106

Query: 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLA------I 201
             G+S+L+   AGGVG   IQLA+H+ GA +V AT  S  K + LR LG  +        
Sbjct: 107 QKGESVLIHAAAGGVGQAAIQLAQHL-GA-EVFATVGSEEKREFLRELGGPVDHIFSSRD 164

Query: 202 DYTKENIEDL--PEKFDVVFDAVG--QCDKALKAVKEGGRVVSI 241
               + I         DVV +++       + + +   GR V I
Sbjct: 165 LSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEI 208

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score =  134 bits (339), Expect = 9e-37
 Identities = 92/302 (30%), Positives = 132/302 (43%), Gaps = 45/302 (14%)

Query: 1   MKAWVYKE--YGNSQSVLKFETNVEVPSLREDQVLIKVVAAALN----------PIDFKR 48
           M A+  +E   G+ +  ++ E  V VP L   +VL+ V+AA +N          P+    
Sbjct: 8   MYAFAIREERDGDPRQAIQLEV-VPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFA 66

Query: 49  MLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRN----- 103
            L  +   D P   I G D +GVV +VG  V ++KVGDEV     +  L  P        
Sbjct: 67  FLRKYGKLDLPF-HIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDPM 125

Query: 104 --------------GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL---ERS 146
                         GS AE+  V++  L  KPK+L++ EAA   L   TAY  L     +
Sbjct: 126 LSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPA 185

Query: 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE 206
           A   G ++L+ G AGG+G+   QLA+   G + VA  SS  K +  RSLGA+  ID    
Sbjct: 186 AVKPGDNVLIWGAAGGLGSYATQLAR-AGGGNPVAVVSSPEKAEYCRSLGAEAVIDRNDF 244

Query: 207 NIED-LPEKFDVVFDAVGQCDKAL-KAVKE--GGRVVSII----GSVTPPASSFVLTSDG 258
                LP+          +  K   K ++E  GG    I+    G  T P S +V    G
Sbjct: 245 GHWGRLPDHNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVYVCRRGG 304

Query: 259 SI 260
            +
Sbjct: 305 MV 306

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  131 bits (333), Expect = 3e-36
 Identities = 84/284 (29%), Positives = 125/284 (44%), Gaps = 36/284 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSP 59
           MKA    EYG     L+ E  V VP     QVL++V  A +   D   + G +       
Sbjct: 1   MKAARLYEYG---KPLRLED-VPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYK 56

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEV--YGDI-----------NEKALDHPKR---- 102
           LP   G++ AG VE+VGS V   K GD V  +               E   ++ +     
Sbjct: 57  LPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIG 116

Query: 103 -NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA--FSAGKSILVLGG 159
            +G  AEY  V    L   P+ L  VEAA L  A  TAY  ++++      G +++V+ G
Sbjct: 117 TDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVI-G 175

Query: 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPE-----K 214
            GG+G + +Q+ + +  A+ +A   S   L L   LGAD  ++ + + +E++ E      
Sbjct: 176 VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDDVVEEVRELTGGRG 235

Query: 215 FDVVFDAVG---QCDKALKAVKEGGR--VVSIIGSVTPPASSFV 253
            D V D VG       A K + +GGR  +V   G    P S  V
Sbjct: 236 ADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHGRLPTSDLV 279

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score =  129 bits (327), Expect = 7e-36
 Identities = 76/227 (33%), Positives = 107/227 (47%), Gaps = 17/227 (7%)

Query: 23  EVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
           EV      +V I+V A +LN  D   + G +  T  P P  PG++ +GVV  VG  V + 
Sbjct: 1   EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYP-TMPPYPFTPGFEASGVVRAVGPHVTRL 59

Query: 83  KVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142
            VGDEV     E         G  A    V E+ +  KP +LSF EA +LP+   T  + 
Sbjct: 60  AVGDEVIAGTGE-------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDA 112

Query: 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID 202
             R+  + G+ IL+    GG G M +QLA+   GA   A  SS  KL+ L+ LG    I+
Sbjct: 113 FARAGLAKGEHILIQTATGGTGLMAVQLARLK-GAEIYATASSDDKLEYLKQLGVPHVIN 171

Query: 203 YTKENIEDLPEKF------DVVFDAVG--QCDKALKAVKEGGRVVSI 241
           Y +E+ E+   +       DVV + +      K L  +  GGR V I
Sbjct: 172 YVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEI 218

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score =  130 bits (330), Expect = 2e-35
 Identities = 89/306 (29%), Positives = 130/306 (42%), Gaps = 53/306 (17%)

Query: 1   MKAWVYKE--YGNSQSVLKFETNVEVPSLREDQVLIKVVAAALN----------PIDFKR 48
           M A+  +   YG+    ++ E  V VP L   +VL+ V+AA +N          P+    
Sbjct: 13  MYAFAIRPERYGDPAQAIQLED-VPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVS--- 68

Query: 49  MLGAFSATDSPLP-TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRN---- 103
              A        P  I G D +G+V  VG  VK +KVGDEV    +    + P+R     
Sbjct: 69  TFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDP 128

Query: 104 ---------------GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA- 147
                          GS A++  V+   L  KPK+LS+ EAA+  L   TAY  L     
Sbjct: 129 MFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNP 188

Query: 148 --FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK 205
                G ++L+ G +GG+G+M IQLA+   GA+ VA  SS  K +  R+LGA+  I+   
Sbjct: 189 NTVKPGDNVLIWGASGGLGSMAIQLARAA-GANPVAVVSSEEKAEYCRALGAEGVINRRD 247

Query: 206 ENIEDLPEKFDVVFDAVGQCDKALKAVKE-------GGRVVSII----GSVTPPASSFVL 254
            +   +    DV  +A     K  +   +       G     I+    G  T P S FV 
Sbjct: 248 FDHWGVLP--DVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVC 305

Query: 255 TSDGSI 260
              G +
Sbjct: 306 DRGGMV 311

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score =  128 bits (323), Expect = 7e-35
 Identities = 77/232 (33%), Positives = 113/232 (48%), Gaps = 21/232 (9%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A   K +G    VLK       P+ + + VLIKV AA +N  D  +  G +       
Sbjct: 2   MRAVTLKGFGGVD-VLKIGE-SPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSS 59

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
             I G +VAG VE VGS VK+FK GD V   +           G  AEY    +  +   
Sbjct: 60  E-ILGLEVAGYVEDVGSDVKRFKEGDRVMALL---------PGGGYAEYAVAHKGHVMHI 109

Query: 121 PKNLSFVEAASLPLATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P+  +F EAA++P A  TA++ L++      G+S+L+  GA GVGT   QLA+  +GA+ 
Sbjct: 110 PQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEK-YGAAT 168

Query: 180 VAATSSTAKLDLLRSLGADLAIDY-----TKENIEDL--PEKFDVVFDAVGQ 224
           +  TSS  K+D  + L A + I Y         ++ L   +  ++V D VG 
Sbjct: 169 IITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGG 220

Length = 334

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 3e-34
 Identities = 85/270 (31%), Positives = 128/270 (47%), Gaps = 34/270 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA +   +     +      V  P   +D+V+IKV  A L   D  ++ G +       
Sbjct: 1   MKAVILPGFKQGYRI----EEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR--MKY 54

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV------------YGDINEKALDHPKR------ 102
           P I G++V G VE+VG  VK FK GD V            Y    E+A    +       
Sbjct: 55  PVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEEL 114

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAG 161
           +G  AEY  V+   L   P N+S  E A + P  T   Y GL R+    G+++LV G  G
Sbjct: 115 DGFFAEYAKVKVTSLVKVPPNVSD-EGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGG 173

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK--ENIEDLPEKFDVVF 219
           GVG   IQ+AK   GA  +A TSS +K  ++    AD  I  +K  E ++ +    D+V 
Sbjct: 174 GVGIHAIQVAK-ALGAKVIAVTSSESKAKIVSKY-ADYVIVGSKFSEEVKKIGGA-DIVI 230

Query: 220 DAVG--QCDKALKAVKEGGRVVSIIGSVTP 247
           + VG    +++L+++  GG+++  IG+V P
Sbjct: 231 ETVGTPTLEESLRSLNMGGKII-QIGNVDP 259

Length = 334

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  121 bits (307), Expect = 1e-32
 Identities = 80/267 (29%), Positives = 113/267 (42%), Gaps = 31/267 (11%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAW +         L     V VP     +VL+KV AA +   D   + G    T + L
Sbjct: 1   MKAWRFH---KGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGG-VPTLTKL 56

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHP------------------KR 102
           P   G+++AG V +VG+ V  FKVGD V                                
Sbjct: 57  PLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGI 116

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGG 162
           +G  AEY  V    L   P  + F +AA    A  T Y  + R+        +++ G GG
Sbjct: 117 DGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGG 176

Query: 163 VGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID-----YTKENIEDLPEKFDV 217
           +G   +Q+AK   GA+ +A      KL+L + LGAD  ++        +    L   FDV
Sbjct: 177 LGLNAVQIAKA-MGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDV 235

Query: 218 VFDAVGQ---CDKALKAVKEGGRVVSI 241
           +FD VG     + A KAVK GGR+V +
Sbjct: 236 IFDFVGTQPTFEDAQKAVKPGGRIVVV 262

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  120 bits (302), Expect = 7e-32
 Identities = 75/257 (29%), Positives = 106/257 (41%), Gaps = 27/257 (10%)

Query: 20  TNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79
             V VP     +VLIK+ A  +   D     G +    S  P +PG+++ G V +VG+ V
Sbjct: 15  EEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG--SKYPLVPGHEIVGEVVEVGAGV 72

Query: 80  KKFKVGDEV-----YG---------DINEKALDHPK-----RNGSLAEYTAVEENLLALK 120
           +  KVGD V      G            E              G  AEY   +     L 
Sbjct: 73  EGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLL 132

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           P  L   +AA L  A  T Y  L  +    G+ + VL G GG+G + +Q A+   G   V
Sbjct: 133 PDGLPLAQAAPLLCAGITVYSALRDAGPRPGERVAVL-GIGGLGHLAVQYARA-MGFETV 190

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK-FDVVFD---AVGQCDKALKAVKEGG 236
           A T S  K +L R LGAD  +D   E  E       DV+     +    + AL  ++ GG
Sbjct: 191 AITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVTVVSGAAAEAALGGLRRGG 250

Query: 237 RVVSIIGSVTPPASSFV 253
           R+V +    +PP S  +
Sbjct: 251 RIVLVGLPESPPFSPDI 267

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  119 bits (301), Expect = 1e-31
 Identities = 79/268 (29%), Positives = 123/268 (45%), Gaps = 35/268 (13%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V +E+G     +K   +V VP     +VL+K+ A+ +   D    LG +      L
Sbjct: 1   MKAAVVEEFGEKPYEVK---DVPVPEPGPGEVLVKLEASGVCHTDLHAALGDW-PVKPKL 56

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-----YG---------DINEKALDHPK----- 101
           P I G++ AGVV  VG  V   KVGD V     Y            +E    + K     
Sbjct: 57  PLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYT 116

Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
            +G+ AEY   +   +   P  LSF +AA L  A  T Y+ L+++    G  +++ G  G
Sbjct: 117 VDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKAGLKPGDWVVISGAGG 176

Query: 162 GVGTMVIQLAKHVFGASKVAATSS-TAKLDLLRSLGADLAIDYTKENIEDLPEKFD---- 216
           G+G + +Q AK +    +V A      KL+L + LGAD  +D+ K +  +  ++      
Sbjct: 177 GLGHLGVQYAKAMGL--RVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGG 234

Query: 217 ---VVFDAVGQC--DKALKAVKEGGRVV 239
              VV  AV     ++AL  ++ GG +V
Sbjct: 235 AHAVVVTAVSAAAYEQALDYLRPGGTLV 262

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score =  117 bits (297), Expect = 1e-31
 Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 19/165 (11%)

Query: 34  IKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN 93
           I+V AA LN   F+ +L A            G + AGVV +VG  V    VGD V G   
Sbjct: 1   IEVRAAGLN---FRDVLIALGLYPGEAV--LGGECAGVVTRVGPGVTGLAVGDRVMGLAP 55

Query: 94  EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGK 152
                     G+ A     +  L+   P   SF EAA++P+   TAY  L + +    G+
Sbjct: 56  ----------GAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAYYALVDLARLRPGE 105

Query: 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLG 196
           S+L+   AGGVG   IQLA+H+ GA +V AT  S  K D LR+LG
Sbjct: 106 SVLIHAAAGGVGQAAIQLARHL-GA-EVFATAGSPEKRDFLRALG 148

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  117 bits (295), Expect = 7e-31
 Identities = 77/234 (32%), Positives = 111/234 (47%), Gaps = 27/234 (11%)

Query: 21  NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
             ++P     +V++KV A+ ++  D +   G +     PLP  PGYD+ G V+ +GS V 
Sbjct: 19  EADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQP-PLPFTPGYDLVGRVDALGSGVT 77

Query: 81  KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140
            F+VGD V       AL    R G  AEY  ++   L   P+ +   EA  L L   TAY
Sbjct: 78  GFEVGDRV------AAL---TRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAY 128

Query: 141 EGLERSAFS-AGKSILVLGGAGGVGTMVIQLAK----HVFGASKVAATSSTAKLDLLRSL 195
           + L R+A    G+ +L+ G +GGVG  +++LA      V+G      T+S      LR L
Sbjct: 129 QMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYG------TASERNHAALREL 182

Query: 196 GADLAIDYTKENIED---LPEKFDVVFDAVGQCDKA--LKAVKEGGRVVSIIGS 244
           GA   IDY  ++       P   DVVFD VG         A+  GG +V   G+
Sbjct: 183 GA-TPIDYRTKDWLPAMLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGN 235

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  114 bits (287), Expect = 1e-29
 Identities = 86/267 (32%), Positives = 120/267 (44%), Gaps = 42/267 (15%)

Query: 1   MKAWVYKEYGN-SQSVLKFETNVEVPSLREDQVLIKVVAAA-----LNPIDFKRMLGAFS 54
           MKA V ++ G   ++ L+  T V VP     +VLIKV A       L+ ++     G   
Sbjct: 1   MKAMVLEKPGPIEENPLRL-TEVPVPEPGPGEVLIKVEACGVCRTDLHIVE-----G--D 52

Query: 55  ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDI------NEKALDHP 100
                LP IPG+++ G VE VG  V +F VGD V         G+        E   D+ 
Sbjct: 53  LPPPKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNA 112

Query: 101 K-----RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSIL 155
           +      +G  AEY   +E      P++    EAA L  A    Y  L+ +    G+  L
Sbjct: 113 RFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRALKLAGLKPGQ-RL 171

Query: 156 VLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF 215
            L G G    + +Q+A++  GA   A T S    +L R LGAD A D      +  PE  
Sbjct: 172 GLYGFGASAHLALQIARY-QGAEVFAFTRSGEHQELARELGADWAGDSD----DLPPEPL 226

Query: 216 D--VVFDAVGQ-CDKALKAVKEGGRVV 239
           D  ++F  VG     AL+AVK+GGRVV
Sbjct: 227 DAAIIFAPVGALVPAALRAVKKGGRVV 253

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  113 bits (285), Expect = 2e-29
 Identities = 92/296 (31%), Positives = 130/296 (43%), Gaps = 59/296 (19%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V   +G +   L+    V VP     +VL+KV A  +   D K++ G    TD   
Sbjct: 1   MKAAVL--HGPNDVRLE---EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGH--TDLKP 53

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDI-------------------NEKALDHPK 101
           P I G+++AG + +VG  V  FKVGD V+                      N K   +  
Sbjct: 54  PRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLY 113

Query: 102 RNGSLAEYTAV------EENLLALKPKNLSFVEAA-SLPLATETAYEGLERSAFSAGKSI 154
            +G  AEY  V         +L L P N+SF EAA   PLA         ++    G ++
Sbjct: 114 -DGGFAEYVRVPAWAVKRGGVLKL-PDNVSFEEAALVEPLAC--CINAQRKAGIKPGDTV 169

Query: 155 LVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDLPE 213
           LV+G AG +G +   LAK   GA KV  +  +  +L+  + LGAD  ID  +   EDL E
Sbjct: 170 LVIG-AGPIGLLHAMLAKA-SGARKVIVSDLNEFRLEFAKKLGADYTIDAAE---EDLVE 224

Query: 214 K---------FDVVFDAVG----QCDKALKAVKEGGRVVSIIGSVTPPASSFVLTS 256
           K          DVV  A G    Q   AL+ V++GGR++       P  S+  +  
Sbjct: 225 KVRELTDGRGADVVIVATGSPEAQAQ-ALELVRKGGRIL--FFGGLPKGSTVNIDP 277

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score =  109 bits (275), Expect = 4e-28
 Identities = 81/253 (32%), Positives = 116/253 (45%), Gaps = 25/253 (9%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP- 59
           M+A    E+G    VL  E  V  P     QV I V AA ++ +D +   G       P 
Sbjct: 1   MRAIRLHEFGPP-EVLVPED-VPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPE 58

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
           LP +PG +VAGVV+ VG  V    +G  V            +  G  AE    + + L  
Sbjct: 59  LPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAH-------TGRAGGGYAELAVADVDSLHP 111

Query: 120 KPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
            P  L    A ++     TA   L+ +  + G  +LV   AGG+G++++QLAK   GA+ 
Sbjct: 112 VPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAA-GATV 170

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK---------FDVVFDAVGQC--DKA 228
           V A    AK  L+R+LGAD+A+DYT+    D P++           VV D VG      A
Sbjct: 171 VGAAGGPAKTALVRALGADVAVDYTR---PDWPDQVREALGGGGVTVVLDGVGGAIGRAA 227

Query: 229 LKAVKEGGRVVSI 241
           L  +  GGR ++ 
Sbjct: 228 LALLAPGGRFLTY 240

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  109 bits (275), Expect = 6e-28
 Identities = 83/280 (29%), Positives = 120/280 (42%), Gaps = 48/280 (17%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGA--FSATDS 58
           MKA  Y  +G     ++ E  V  P ++  +V IKV    +   D    L    F  T+ 
Sbjct: 1   MKAARY--HGRKD--IRVE-EVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEG 55

Query: 59  P-------LPTIPGYDVAGVVEKVGSQVKKFKVGDEV--YGDINEKALDHPKR------- 102
                    P   G++ +GVV +VGS V  FKVGD V     I        KR       
Sbjct: 56  HPHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCD 115

Query: 103 ----------NGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAG 151
                      G  AEY  V    +   P N+   EAA + PLA   A+  + RS F  G
Sbjct: 116 SLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAV--AWHAVRRSGFKPG 173

Query: 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKEN-IE 209
            + LVL GAG +G + I   K   GASK+  +  S A+ +L   LGA + +D T+ + + 
Sbjct: 174 DTALVL-GAGPIGLLTILALKA-AGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVA 231

Query: 210 DLPEK-----FDVVFDAVG---QCDKALKAVKEGGRVVSI 241
           ++ +       DV FD  G     D A+ A++  G  V++
Sbjct: 232 EVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNV 271

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  108 bits (271), Expect = 3e-27
 Identities = 86/295 (29%), Positives = 128/295 (43%), Gaps = 63/295 (21%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V K      ++      + VP  +E ++LI+V A  +   D   + G       P 
Sbjct: 1   MKAAVLKGPNPPLTI----EEIPVPRPKEGEILIRVAACGVCHSDLHVLKGE---LPFPP 53

Query: 61  PTIPGYDVAGVVEKVGSQVK---KFKVGDEVYG-----------------DINEKA---- 96
           P + G++++G V +VG  V+      VGD V G                 ++ E      
Sbjct: 54  PFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYN 113

Query: 97  ------LDHPKR-------------NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATE 137
                  D   R              G LAEY  V    LA  P++L + E+A L  A  
Sbjct: 114 RLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGF 173

Query: 138 TAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSL 195
           TAY  L+ +A    G+++ V+ G GGVG+  IQLAK  FGAS + A      KL   + L
Sbjct: 174 TAYGALKHAADVRPGETVAVI-GVGGVGSSAIQLAKA-FGASPIIAVDVRDEKLAKAKEL 231

Query: 196 GADLAIDYTKEN----IEDL--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSI 241
           GA   ++  KE+    I ++      DVV +A+G+      AL  V++GGR V +
Sbjct: 232 GATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVV 286

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  106 bits (268), Expect = 7e-27
 Identities = 80/274 (29%), Positives = 121/274 (44%), Gaps = 44/274 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A VY+E+G    +      V  P    D V+++V A  +   D+    G     D  L
Sbjct: 1   MRAAVYEEFGEPLEI----REVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDP--DVTL 54

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVY---------------GDINEKALDHP---KR 102
           P +PG++ AGVV +VG  V +++VGD V                GD N            
Sbjct: 55  PHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTH 114

Query: 103 NGSLAEYTAVEE---NLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLG 158
            GS AEY AV     NL+ L P ++ FV AA L     TA+  L  ++    G+ + V G
Sbjct: 115 PGSFAEYVAVPRADVNLVRL-PDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHG 173

Query: 159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF--- 215
             GGVG   + +A    GA  +A      KL+L R LGA   ++ ++   ED+       
Sbjct: 174 -CGGVGLSAVMIAS-ALGARVIAVDIDDDKLELARELGAVATVNASEV--EDVAAAVRDL 229

Query: 216 -----DVVFDAVG---QCDKALKAVKEGGRVVSI 241
                 V  DA+G    C  ++ ++++ GR V +
Sbjct: 230 TGGGAHVSVDALGIPETCRNSVASLRKRGRHVQV 263

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score =  104 bits (261), Expect = 2e-26
 Identities = 65/186 (34%), Positives = 84/186 (45%), Gaps = 22/186 (11%)

Query: 59  PLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLA 118
           PLP  PGY   G V +VGS V  FK GD V+              G  AE   V  NLL 
Sbjct: 19  PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFC------------FGPHAERVVVPANLLV 66

Query: 119 LKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS 178
             P  L    AA   LA  TA  G+  +    G+ + V+ G G VG +  QLAK   GA 
Sbjct: 67  PLPDGLPPERAALTALA-ATALNGVRDAEPRLGERVAVV-GLGLVGLLAAQLAKA-AGAR 123

Query: 179 KVAATS-STAKLDLLRSLG-ADLAIDYTKENIEDLPEKFDVVFDAVGQ---CDKALKAVK 233
           +V       A+ +L  +LG AD     T + I       DVV +A G     + AL+ ++
Sbjct: 124 EVVGVDPDAARRELAEALGPADPVAADTADEIGGRG--ADVVIEASGSPSALETALRLLR 181

Query: 234 EGGRVV 239
           + GRVV
Sbjct: 182 DRGRVV 187

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score =  104 bits (261), Expect = 4e-26
 Identities = 80/262 (30%), Positives = 113/262 (43%), Gaps = 41/262 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS-- 58
            KA V +E     S+  F   + +  L E  VLI+V  ++LN  D      A +AT +  
Sbjct: 1   FKALVVEEQDGGVSL--FLRTLPLDDLPEGDVLIRVHYSSLNYKD------ALAATGNGG 52

Query: 59  ---PLPTIPGYDVAGVVEKVGSQVKKFKVGDEVY---GDINEKALDHPKRNGSLAEYTAV 112
                P  PG D AG V    S   +F+ GDEV     D+     +     G  AEY  V
Sbjct: 53  VTRNYPHTPGIDAAGTVVS--SDDPRFREGDEVLVTGYDLGM---NTD---GGFAEYVRV 104

Query: 113 E-ENLLALKPKNLSFVEAASLPLATETA---YEGLERSAFSAGKS-ILVLGGAGGVGTMV 167
             + ++ L P+ LS  EA  L  A  TA      LE +  +     +LV G  GGVG++ 
Sbjct: 105 PADWVVPL-PEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIA 163

Query: 168 IQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK------FDVVFDA 221
           + +     G + VA T    + D L+SLGA   +D  +E++ D  +K      +    D 
Sbjct: 164 VAIL-AKLGYTVVALTGKEEQADYLKSLGASEVLD--REDLLDESKKPLLKARWAGAIDT 220

Query: 222 VG--QCDKALKAVKEGGRVVSI 241
           VG       LK  K GG V S 
Sbjct: 221 VGGDVLANLLKQTKYGGVVASC 242

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score =  103 bits (260), Expect = 5e-26
 Identities = 69/249 (27%), Positives = 113/249 (45%), Gaps = 28/249 (11%)

Query: 5   VYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIP 64
           VY ++G    ++    ++ +P     +VL++++AA +NP D   + GA+ +   PLP +P
Sbjct: 2   VYTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSR-PPLPAVP 60

Query: 65  GYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKR-NGSLAEYTAVEENLLALKPKN 123
           G +  GVV +VGS V    VG  V           P    G+  EY     + L   P +
Sbjct: 61  GNEGVGVVVEVGSGVSGLLVGQRVL----------PLGGEGTWQEYVVAPADDLIPVPDS 110

Query: 124 LSFVEAASL---PLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           +S  +AA L   PL   TA+  L E      G  ++       VG M+IQLAK   G   
Sbjct: 111 ISDEQAAMLYINPL---TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKL-LGFKT 166

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQCDKA--LKA 231
           +       +++ L++LGAD  ID + E++              +  DAVG        ++
Sbjct: 167 INVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARS 226

Query: 232 VKEGGRVVS 240
           ++ GG +V+
Sbjct: 227 LRPGGTLVN 235

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  102 bits (256), Expect = 2e-25
 Identities = 78/223 (34%), Positives = 108/223 (48%), Gaps = 23/223 (10%)

Query: 23  EVPSLR--EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
           EVP  +    + L++V A +LN  + K       A + P   +PG+D AGVVE+  +   
Sbjct: 18  EVPDPQPAPHEALVRVAAISLNRGELKF------AAERPDGAVPGWDAAGVVERAAADGS 71

Query: 81  KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140
              VG  V G             G+ AE  AV    LA+ P  +SF +AA+LP+A  TA 
Sbjct: 72  GPAVGARVVG---------LGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTAL 122

Query: 141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA 200
             L R     G+ +LV G +GGVG   +QLA    GA  VA   S A+ + LR LG   A
Sbjct: 123 RALRRGGPLLGRRVLVTGASGGVGRFAVQLAALA-GAHVVAVVGSPARAEGLRELG---A 178

Query: 201 IDYTKENIEDLPEKFDVVFDAVG--QCDKALKAVKEGGRVVSI 241
            +      E      D+V D+VG  Q  +AL+ +  GG VVS+
Sbjct: 179 AEVVVGGSELSGAPVDLVVDSVGGPQLARALELLAPGGTVVSV 221

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score =  102 bits (256), Expect = 3e-25
 Identities = 71/258 (27%), Positives = 107/258 (41%), Gaps = 39/258 (15%)

Query: 2   KAWVYKEY--GNSQ-SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS 58
           +  V  +   G       +    V +P L++ +VL++ +  +++P     M G  S   S
Sbjct: 3   RQVVLAKRPEGPPPPDDFELVE-VPLPELKDGEVLVRTLYLSVDPY----MRGWMSDAKS 57

Query: 59  PLP------TIPGYDVAGVVEKVGSQVKKFKVGDEVYG--DINEKALDHPKRNGSLAEYT 110
             P       + G  V  VVE   S+   FKVGD V G     E A+             
Sbjct: 58  YSPPVQLGEPMRGGGVGEVVE---SRSPDFKVGDLVSGFLGWQEYAVVDGAS-----GLR 109

Query: 111 AVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQ 169
            ++ +L       L  +    L     TAY GL        G++++V   AG VG++V Q
Sbjct: 110 KLDPSLGLPLSAYLGVLGMTGL-----TAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQ 164

Query: 170 LAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIED-----LPEKFDVVFDAVG 223
           +AK + GA  V    S  K   L   LG D AI+Y   ++ +      P+  DV FD VG
Sbjct: 165 IAKLL-GARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVG 223

Query: 224 --QCDKALKAVKEGGRVV 239
               D AL  + +GGR+ 
Sbjct: 224 GEILDAALTLLNKGGRIA 241

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score =  101 bits (253), Expect = 6e-25
 Identities = 76/245 (31%), Positives = 109/245 (44%), Gaps = 18/245 (7%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPID-FKRMLGAFSATDSP 59
           MKA V ++ G    VLK    + +P  +   VLI+V A  LN  + F R   + S     
Sbjct: 1   MKAIVIEQPGGP-EVLKLR-EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVK--- 55

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
            P + G +  G VE+       F  G  V   +          +GS AEYT V    +  
Sbjct: 56  FPRVLGIEAVGEVEEAPGG--TFTPGQRVATAMGGMG---RTFDGSYAEYTLVPNEQVYA 110

Query: 120 KPKNLSFVEAASLPLATETAYEGLERS-AFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS 178
              +LS+ E A+LP    TA+  L RS     G ++L+ GG   VG   ++LAK   GA+
Sbjct: 111 IDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKA-LGAT 169

Query: 179 KVAATSSTAKLDLLRSLGADLAI---DYTKENIEDLPEKFDVVFDAVG--QCDKALKAVK 233
             A T S  +  LL+ LGAD  +       E +   P  FD V + VG      +L+ ++
Sbjct: 170 VTATTRSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTATLKDSLRHLR 229

Query: 234 EGGRV 238
            GG V
Sbjct: 230 PGGIV 234

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 99.3 bits (248), Expect = 2e-24
 Identities = 74/250 (29%), Positives = 115/250 (46%), Gaps = 39/250 (15%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP--LPTIPGYDVAGVVEKVGSQV 79
           V  P     +VLIKV AA +   D       +     P   P + G++ +G + +VG  V
Sbjct: 19  VPEPEPGPGEVLIKVAAAGICGSDLH----IYKGDYDPVETPVVLGHEFSGTIVEVGPDV 74

Query: 80  KKFKVGDEVY----------------GDIN---EKALDHPKRNGSLAEYTAVEENLLALK 120
           + +KVGD V                 GD N    +     + +G  AEY  V E  L   
Sbjct: 75  EGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHEL 134

Query: 121 PKNLSFVEAA-SLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P+NLS   AA + PLA    +   ERS    G +++V  G G +G +  Q+AK       
Sbjct: 135 PENLSLEAAALTEPLAV-AVHAVAERSGIRPGDTVVVF-GPGPIGLLAAQVAKLQGATVV 192

Query: 180 VAATSSTA-KLDLLRSLGADLAIDYTKENIEDLP------EKFDVVFD---AVGQCDKAL 229
           V  T     +LD+ + LGAD A++  +E++ +L       +  DVV +   AV   ++AL
Sbjct: 193 VVGTEKDEVRLDVAKELGAD-AVNGGEEDLAELVNEITDGDGADVVIECSGAVPALEQAL 251

Query: 230 KAVKEGGRVV 239
           + +++GGR+V
Sbjct: 252 ELLRKGGRIV 261

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 99.6 bits (249), Expect = 2e-24
 Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 23/233 (9%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
           V VP     +VL+K     +N  D     G +     P P   G++  G V  VG  V  
Sbjct: 23  VPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKP-PFDCGFEGVGEVVAVGEGVTD 81

Query: 82  FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141
           FKVGD V       A       G+ AEY  V        P      E   L ++  TA  
Sbjct: 82  FKVGDAV-------ATMS---FGAFAEYQVVPARHA--VPVPELKPEVLPLLVSGLTASI 129

Query: 142 GLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA 200
            LE      +G+++LV   AGG G   +QLAK   G   +   SS  K + L+SLG D  
Sbjct: 130 ALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKL-AGCHVIGTCSSDEKAEFLKSLGCDRP 188

Query: 201 IDYTKENIEDL-----PEKFDVVFDAVG--QCDKALKAVKEGGRVVSIIGSVT 246
           I+Y  E++ ++     P+  DVV+++VG    D  +  +   GR++ +IG ++
Sbjct: 189 INYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLI-VIGFIS 240

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =   99 bits (250), Expect = 2e-24
 Identities = 77/264 (29%), Positives = 116/264 (43%), Gaps = 44/264 (16%)

Query: 19  ETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS--PLPTIPGYDVAGVVEKVG 76
             ++  P     +VL++V    +   D    L  +   +     P I G++++G V +VG
Sbjct: 14  VVDIPEPVPGAGEVLVRVKRVGICGSD----LHIYHGRNPFASYPRILGHELSGEVVEVG 69

Query: 77  SQVKKFKVGDEVYGDI--------------------NEKALDHPKRNGSLAEYTAVEENL 116
             V   KVGD V  D                      +    H  R+G  AEY  V  + 
Sbjct: 70  EGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVH--RDGGFAEYIVVPADA 127

Query: 117 LALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF 175
           L L P+ LS  +AA + PLA       + R+  +AG ++LV+G AG +G  VIQ+AK   
Sbjct: 128 L-LVPEGLSLDQAALVEPLAI--GAHAVRRAGVTAGDTVLVVG-AGPIGLGVIQVAKAR- 182

Query: 176 GASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLP------EKFDVVFDAVGQCD--- 226
           GA  +       +L+  R LGAD  I+   E++          E  DVV DA G      
Sbjct: 183 GARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVIDATGNPASME 242

Query: 227 KALKAVKEGGRVVSIIGSVTPPAS 250
           +A++ V  GGRVV ++G    P +
Sbjct: 243 EAVELVAHGGRVV-LVGLSKGPVT 265

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =   99 bits (250), Expect = 3e-24
 Identities = 72/277 (25%), Positives = 110/277 (39%), Gaps = 44/277 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAAL---------NPIDF---KR 48
           MKA    E G     L+ E  ++ P     +VL+KV A  +            D    K 
Sbjct: 1   MKAAAVVEPG---KPLE-EVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKT 56

Query: 49  MLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDE--VY-------------GDIN 93
           M          LP + G+++ G V  VG      KVGD+  VY             GD N
Sbjct: 57  MS--LDDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDEN 114

Query: 94  EKALDHP---KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSA 150
             A        ++G  AEY  V  +   + P  L    AA+L  +  TAY  +++     
Sbjct: 115 LCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLV 174

Query: 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID-----YTK 205
               +V+ GAGG+G M + L K +  A+ +      AKL+  ++ GAD+ ++       K
Sbjct: 175 ADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAK 234

Query: 206 ENIEDLPEKFDVVFDAVGQCD---KALKAVKEGGRVV 239
             I+      D V D V        A   + +GG++V
Sbjct: 235 RIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLV 271

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 98.9 bits (247), Expect = 4e-24
 Identities = 78/258 (30%), Positives = 114/258 (44%), Gaps = 34/258 (13%)

Query: 10  GNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVA 69
           G+    L+      VP     +VL++V A+ L   D         A       IPG++ A
Sbjct: 8   GDRTVELR---EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQ-GVIPGHEPA 63

Query: 70  GVVEKVGSQVKKFKVGDEV------------YGD-------INEKALDHPKRNGSLAEYT 110
           GVV  VG  V  F+VGD V                       +++A     R+G  AEY 
Sbjct: 64  GVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYM 123

Query: 111 AVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQL 170
            V E  L   P +LSF + A L     TAY  L R   S   ++LV+ GAG VG   + L
Sbjct: 124 LVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRRVGVSGRDTVLVV-GAGPVGLGALML 182

Query: 171 AKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDLPE-----KFDVVFDAVGQ 224
           A+   GA  V     S  +L+L ++LGAD  I+  +++++++ E       DV  +  G 
Sbjct: 183 AR-ALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGADVAIECSGN 241

Query: 225 C---DKALKAVKEGGRVV 239
                 AL+AV+  GR+V
Sbjct: 242 TAARRLALEAVRPWGRLV 259

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 97.7 bits (244), Expect = 1e-23
 Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 17/209 (8%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF---SATD 57
            KA VY E+G  + VL+ E+    P    ++VL+K++AA +NP D  ++ G +     T 
Sbjct: 1   AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTT 60

Query: 58  SPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL 117
              P + G +  G V KVGS VK  K GD V        +      G+   +  V  + L
Sbjct: 61  PEPPAVGGNEGVGEVVKVGSGVKSLKPGDWV--------IPLRPGLGTWRTHAVVPADDL 112

Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERS-AFSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
              P ++   +AA+L +   TAY  LE       G  ++  G    VG  VIQLAK   G
Sbjct: 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKL-LG 171

Query: 177 ASKVAA---TSSTAKL-DLLRSLGADLAI 201
              +          +L + L++LGAD  +
Sbjct: 172 IKTINVVRDRPDLEELKERLKALGADHVL 200

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 96.3 bits (240), Expect = 5e-23
 Identities = 76/275 (27%), Positives = 102/275 (37%), Gaps = 46/275 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
             A VY   G+ +           P      VLI+V A  +   D     G         
Sbjct: 2   KAAVVYVGGGDVR-----LEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPG- 55

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVY-----------------------GDINEKAL 97
             I G++  G V +VG  V+ FKVGD V                              A 
Sbjct: 56  DIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAG 114

Query: 98  DHPKRNGSLAEYTAV-EENLLALKPKNLSFVEAA-SLPLATETAYEGLERSAFSAGKSIL 155
                +G  AEY  V  +  LA  P  +    AA + PLAT  AY G    A       +
Sbjct: 115 LGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLAT--AYHGHAERAAVRPGGTV 172

Query: 156 VLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIEDL--- 211
           V+ GAG +G + I LAK   GAS V     S  +L+L +  G    +    E+       
Sbjct: 173 VVVGAGPIGLLAIALAKL-LGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEIL 231

Query: 212 ----PEKFDVVFDAVG---QCDKALKAVKEGGRVV 239
                   DVV +AVG     D+AL+A++ GG VV
Sbjct: 232 ELTGGRGADVVIEAVGSPPALDQALEALRPGGTVV 266

Length = 350

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 96.0 bits (240), Expect = 5e-23
 Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 50/261 (19%)

Query: 20  TNVEVPSLREDQVLIKVVAAALNPIDFK-RMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78
           T+V VP    + VLIKV   A+   D        ++    P+P + G++  G V +VGS+
Sbjct: 16  TDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSE 75

Query: 79  VKKFKVGDEVYG-------------------DINEKAL--DHPKRNGSLAEYTAV-EENL 116
           V  FKVGD V G                     N K +  +   R G+ AEY  +   N+
Sbjct: 76  VTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVN---RPGAFAEYLVIPAFNV 132

Query: 117 LALKPKNLSFVEAASL-PL--ATETAYEGLERSAFS-AGKSILVLGGAGGVGTMVIQLAK 172
             + P ++    AA   P   A  TA       +F   G+ +L+ G AG +G M   +AK
Sbjct: 133 WKI-PDDIPDDLAAIFDPFGNAVHTAL------SFDLVGEDVLITG-AGPIGIMAAAVAK 184

Query: 173 HVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ- 224
           HV GA  V  T  +  +L+L R +GA  A++  KE++ D      + E FDV  +  G  
Sbjct: 185 HV-GARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSGAP 243

Query: 225 --CDKALKAVKEGGRVVSIIG 243
               + L  +  GGR ++++G
Sbjct: 244 SAFRQMLDNMNHGGR-IAMLG 263

Length = 341

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 94.1 bits (235), Expect = 3e-22
 Identities = 74/268 (27%), Positives = 113/268 (42%), Gaps = 52/268 (19%)

Query: 16  LKFETNVEVPSLREDQVLIKVVAAALNPID---FKRM-LGAFSATDSPLPTIPGYDVAGV 71
           L+ E    +P     +VL++V A  +   D   +K   +G F   +   P + G++ AG 
Sbjct: 10  LRLE-ERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKE---PMVLGHESAGT 65

Query: 72  VEKVGSQVKKFKVGDEV---------------YGDINEKALD-------HPKRNGSLAEY 109
           V  VGS V   KVGD V                G  N   L         P  +G+L  Y
Sbjct: 66  VVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYN---LCPDMRFAATPPVDGTLCRY 122

Query: 110 TAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVI 168
                +     P N+S  E A + PL+         R+    G ++LV  GAG +G +  
Sbjct: 123 VNHPADFCHKLPDNVSLEEGALVEPLS--VGVHACRRAGVRPGDTVLVF-GAGPIGLLTA 179

Query: 169 QLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIEDLPEK---------FDVV 218
            +AK  FGA+KV  T    ++L+  + LGA   ++   E+  +  EK          DVV
Sbjct: 180 AVAK-AFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVV 238

Query: 219 FDAVG--QCDK-ALKAVKEGGRVVSIIG 243
            +  G   C + A+ A + GG VV ++G
Sbjct: 239 IECTGAESCIQTAIYATRPGGTVV-LVG 265

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 93.8 bits (234), Expect = 5e-22
 Identities = 81/311 (26%), Positives = 125/311 (40%), Gaps = 67/311 (21%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A V  E G    +      VE+      +VL+++ AA L   D   + G   A   PL
Sbjct: 1   MRAAVLHEVGKPLEI----EEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA---PL 53

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------------------YGDINEK 95
           P + G++ AGVVE+VG  V   K GD V                          G +  +
Sbjct: 54  PAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQ 113

Query: 96  ALDHPKR-------------NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142
             D  +R              G+ AEYT V E  +     ++    AA L     T   G
Sbjct: 114 LPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGV-G 172

Query: 143 --LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGADL 199
             +  +    G ++ V+G  GGVG   IQ A+   GAS+ +A      KL+L R  GA  
Sbjct: 173 AVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIA-GASRIIAVDPVPEKLELARRFGATH 230

Query: 200 AIDYTKENIEDL------PEKFDVVFDAVG---QCDKALKAVKEGGRVVSIIG------S 244
            ++ ++++  +           D  F+AVG      +AL   ++GG  V ++G      +
Sbjct: 231 TVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAV-VVGMGPPGET 289

Query: 245 VTPPASSFVLT 255
           V+ PA    L+
Sbjct: 290 VSLPALELFLS 300

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 91.1 bits (227), Expect = 4e-21
 Identities = 88/284 (30%), Positives = 127/284 (44%), Gaps = 63/284 (22%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDF----------KRML 50
           MKA V K      + L     V VP     +VLIKV+AA++   D            R+ 
Sbjct: 1   MKAIV-KTKAGPGAELV---EVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIK 56

Query: 51  GAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDI-------------NEKAL 97
                   P P I G++ AG V +VG  V + KVGD V  +              N    
Sbjct: 57  --------P-PLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVC 107

Query: 98  DHPK-----RNGSLAEYTAVEENLLALKPKNLSFVEAASL--PL--ATETAYEGLERSAF 148
            + K      +G  AEY  V E  L    K++   E AS+  PL  A  T   G      
Sbjct: 108 QNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPP-EIASIQEPLGNAVHTVLAGD----- 161

Query: 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKEN 207
            +GKS+L+ G  G +G M I +AK   GAS V A+  +  +L+L + +GAD+ I+  +E+
Sbjct: 162 VSGKSVLITG-CGPIGLMAIAVAK-AAGASLVIASDPNPYRLELAKKMGADVVINPREED 219

Query: 208 IEDLPEKF-----DVVFDAVGQ---CDKALKAVKEGGRVVSIIG 243
           + ++         DVV +  G     ++ LKA+  GGR VSI+G
Sbjct: 220 VVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGR-VSILG 262

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 90.4 bits (225), Expect = 5e-21
 Identities = 68/232 (29%), Positives = 91/232 (39%), Gaps = 37/232 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA    E G    +       +VP     +VLIKV A  +   D     GA        
Sbjct: 1   YKAVQVTEPGGPLEL----VERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGL--SY 54

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV------------------------YGDINEKA 96
           P +PG++V G ++ VG  V ++KVGD V                         G +    
Sbjct: 55  PRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVT 114

Query: 97  LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILV 156
            D     G  AEY       LA  P +L   EAA L  A  T +  L  S    G  + V
Sbjct: 115 RD-----GGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNSGAKPGDLVAV 169

Query: 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI 208
             G GG+G + +Q A    G   VA +  + K DL R LGA   ID +KE++
Sbjct: 170 Q-GIGGLGHLAVQYAAK-MGFRTVAISRGSDKADLARKLGAHHYIDTSKEDV 219

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 88.5 bits (220), Expect = 3e-20
 Identities = 70/238 (29%), Positives = 92/238 (38%), Gaps = 39/238 (16%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYD-----VAGVVEKV- 75
           V+VP   E QVL++ +  +L+P     M G  S   S     P  +     V G V KV 
Sbjct: 32  VDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPS---YAPPVELGEVMVGGTVAKVV 84

Query: 76  GSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLA---LKPKNLSFVEAASL 132
            S    F+ GD V G                 EY   +   L      P  LS      L
Sbjct: 85  ASNHPGFQPGDIVVG------------VSGWQEYAISDGEGLRKLDPSPAPLSA-YLGVL 131

Query: 133 PLATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191
            +   TAY GL       AG++++V   AG VG++V Q+AK   G   V       K D 
Sbjct: 132 GMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLK-GCRVVGIAGGAEKCDF 190

Query: 192 LRS-LGADLAIDYTKEN-----IEDLPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSI 241
           L   LG D  IDY  E+      E  P+  DV F+ VG    D  L  +    R+   
Sbjct: 191 LTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVC 248

Length = 340

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 87.8 bits (218), Expect = 4e-20
 Identities = 66/233 (28%), Positives = 95/233 (40%), Gaps = 29/233 (12%)

Query: 20  TNVEVPSLREDQVLIKVVAAAL---NPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVG 76
                P+    QVL++V    +   +   F +    F       P  PG++  G V  +G
Sbjct: 10  EEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVY--PAEPGGPGHEGWGRVVALG 67

Query: 77  SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT 136
             V+   VGD V G ++          G+ AEY   + +     P  L        PL  
Sbjct: 68  PGVRGLAVGDRVAG-LSG---------GAFAEYDLADADHAVPLPSLLDGQAFPGEPLG- 116

Query: 137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSL 195
             A     R    AGK++ V+ GAG +G + +QLA    GA +V A     A+L L R L
Sbjct: 117 -CALNVFRRGWIRAGKTVAVI-GAGFIGLLFLQLAA-AAGARRVIAIDRRPARLALAREL 173

Query: 196 GADLAIDYTKENIEDLPEK------FDVVFDAVGQ---CDKALKAVKEGGRVV 239
           GA   +    E I +   +       DVV +AVG     D A + V E GR+V
Sbjct: 174 GATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLV 226

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 82.3 bits (204), Expect = 4e-18
 Identities = 70/254 (27%), Positives = 110/254 (43%), Gaps = 30/254 (11%)

Query: 1   MKAWVYKEYGNSQSVLKFETN-VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP 59
           MKA + +EYG    V +      EVP     +VLIKV AA +NP D   + G + +T   
Sbjct: 1   MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGST-KA 59

Query: 60  LPTIPGYDVAGVVEKVG-SQVKKFKVGDEV--YGDINEKALDHPKRNGSLAEYTAVEENL 116
           LP  PG++ +G V   G   + +  +G  V                 G+ AEY   +   
Sbjct: 60  LPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAGS----------YGTYAEYAVADAQQ 109

Query: 117 LALKPKNLSFVEAASL---PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKH 173
               P  +SF + AS    PL   TA   LE +     K+++    A  +G M+++L K 
Sbjct: 110 CLPLPDGVSFEQGASSFVNPL---TALGMLETAREEGAKAVVHTAAASALGRMLVRLCKA 166

Query: 174 VFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI-EDLPE-----KFDVVFDAVG--QC 225
             G   +       ++DLL+ +GA+  ++ +  +  EDL E        + FDAVG    
Sbjct: 167 D-GIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLT 225

Query: 226 DKALKAVKEGGRVV 239
            + L A+  G  + 
Sbjct: 226 GQILLAMPYGSTLY 239

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 81.8 bits (203), Expect = 5e-18
 Identities = 79/258 (30%), Positives = 115/258 (44%), Gaps = 41/258 (15%)

Query: 4   WVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL--- 60
            V KE  + +   + ET +++  L E  VLIKV  ++LN   +K  L   + T       
Sbjct: 4   VVEKE--DGKVSAQVET-LDLSDLPEGDVLIKVAYSSLN---YKDAL---AITGKGGVVR 54

Query: 61  --PTIPGYDVAGVVEKVGSQVKKFKVGDEVY---GDINEKALDHPKRNGSLAEYTAVEEN 115
             P IPG D AG V  V S+  +F+ GDEV      +      H    G  ++Y  V  +
Sbjct: 55  SYPMIPGIDAAGTV--VSSEDPRFREGDEVIVTGYGLGV---SHD---GGYSQYARVPAD 106

Query: 116 LLALKPKNLSFVEAASLPLATETA---YEGLERSAFSAG-KSILVLGGAGGVGTMVIQ-L 170
            L   P+ LS  EA +L  A  TA      LER+  +     +LV G  GGVG++ +  L
Sbjct: 107 WLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAIL 166

Query: 171 AKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVG-- 223
           +K   G   VA+T    + D L+ LGA   ID  +E++         E++    D VG  
Sbjct: 167 SK--LGYEVVASTGKAEEEDYLKELGASEVID--REDLSPPGKPLEKERWAGAVDTVGGH 222

Query: 224 QCDKALKAVKEGGRVVSI 241
                L  +K GG V + 
Sbjct: 223 TLANVLAQLKYGGAVAAC 240

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 81.4 bits (201), Expect = 1e-17
 Identities = 75/257 (29%), Positives = 116/257 (45%), Gaps = 42/257 (16%)

Query: 20  TNVEVPSLREDQVLIKVVAAALNPIDFK-RMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78
           T V VP     +VLIKV+A ++   D        ++ +    P + G++VAG V  +G  
Sbjct: 14  TEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPG 73

Query: 79  VKKFKVGDEVYGDIN---------EKALDHPKRN---------GSLAEYTAVEENLLALK 120
           V+  KVGD V  + +          +   H  +N         G  AEY  V    +   
Sbjct: 74  VEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKN 133

Query: 121 PKNLSFVEAASL--PL--ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
           PK++   E A++  PL  A  T   G       +GKS+LV  GAG +G M I +AK   G
Sbjct: 134 PKSIP-PEYATIQEPLGNAVHTVLAGP-----ISGKSVLVT-GAGPIGLMAIAVAKAS-G 185

Query: 177 ASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ---CD 226
           A  V  +  +  +L+L + +GA   ++  KE++          E  DV  +  G     +
Sbjct: 186 AYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKALE 245

Query: 227 KALKAVKEGGRVVSIIG 243
           + L+AV  GGR VS++G
Sbjct: 246 QGLQAVTPGGR-VSLLG 261

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 81.2 bits (201), Expect = 1e-17
 Identities = 74/279 (26%), Positives = 113/279 (40%), Gaps = 48/279 (17%)

Query: 1   MKAWVYKEYGNSQSVLKFE-TNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDS 58
           MKA VY   G      K     V  P ++     +++V A ++   D     G      +
Sbjct: 1   MKALVYLGPG------KIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGG--VPGA 52

Query: 59  PLPTIPGYDVAGVVEKVGSQVKKFKVGDEV-----------------YGDINEKALDHPK 101
               I G++  G V +VGS VK+ K GD V                 Y    E  L   K
Sbjct: 53  KHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWK 112

Query: 102 R----NGSLAEYTAVEE---NLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSI 154
                +G  AEY  V     NL  + P  L   +A  L     T + G E +    G ++
Sbjct: 113 LGNRIDGGQAEYVRVPYADMNLAKI-PDGLPDEDALMLSDILPTGFHGAELAGIKPGSTV 171

Query: 155 LVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLAIDYTKENIEDLPE 213
            V+G AG VG   +  A+   GA+++ A  S   +LDL +  GA   I+    +I +   
Sbjct: 172 AVIG-AGPVGLCAVAGARL-LGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQIL 229

Query: 214 K------FDVVFDAVG---QCDKALKAVKEGGRVVSIIG 243
           +       D V +AVG     ++A+K V+ GG  ++ +G
Sbjct: 230 ELTGGRGVDCVIEAVGFEETFEQAVKVVRPGG-TIANVG 267

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 80.4 bits (199), Expect = 2e-17
 Identities = 72/273 (26%), Positives = 106/273 (38%), Gaps = 47/273 (17%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V    G    +     ++  P     + L++V+ A +   D +   G       P 
Sbjct: 1   MKALVL--DGG---LDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKG-----YYPF 50

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN-------------------EKALDHPK 101
           P +PG++  G+VE+         VG  V G+IN                      L    
Sbjct: 51  PGVPGHEFVGIVEEGPEAE---LVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVD 107

Query: 102 RNGSLAEY-TAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGG 159
           R+G+ AEY T   ENL  + P  +   +A    PLA   A E LE+   + G  + VL G
Sbjct: 108 RDGAFAEYLTLPLENLHVV-PDLVPDEQAVFAEPLA--AALEILEQVPITPGDKVAVL-G 163

Query: 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVF 219
            G +G ++ Q+     G   V     + KL L R LG +  +    E+       FDVV 
Sbjct: 164 DGKLGLLIAQVLAL-TGPDVVLVGRHSEKLALARRLGVETVLPDEAES---EGGGFDVVV 219

Query: 220 DAVGQCD---KALKAVKEGGRVV--SIIGSVTP 247
           +A G       AL+ V+  G VV  S       
Sbjct: 220 EATGSPSGLELALRLVRPRGTVVLKSTYAGPAS 252

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score = 79.6 bits (197), Expect = 3e-17
 Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 28/236 (11%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
            E+P L++ +VL + +  +++P      +  +S   +   T+ G  VA V+E   S+  K
Sbjct: 26  EELPPLKDGEVLCEALFLSVDPY-----MRPYSKRLNEGDTMIGTQVAKVIE---SKNSK 77

Query: 82  FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLS---FVEAASLPLATET 138
           F VG  V    +     H   +G           L A  P +L     +    +P  T  
Sbjct: 78  FPVGTIVVA--SFGWRTHTVSDGKDQ---PDLYKLPADLPDDLPPSLALGVLGMPGLT-- 130

Query: 139 AYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA 197
           AY GL E     AG++++V G AG VG++V Q+AK + G   +    S  K+  L+ LG 
Sbjct: 131 AYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAK-IKGCKVIGCAGSDDKVAWLKELGF 189

Query: 198 DLAIDYTKENIEDL-----PEKFDVVFDAVG--QCDKALKAVKEGGRVVSIIGSVT 246
           D   +Y   ++E+      P+  D  FD VG       L  + + GR V++ GS++
Sbjct: 190 DAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGR-VAVCGSIS 244

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 78.7 bits (195), Expect = 8e-17
 Identities = 72/253 (28%), Positives = 104/253 (41%), Gaps = 36/253 (14%)

Query: 20  TNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79
              E   L  D V IK+    +   D   +   +  T  PL  +PG+++ G+V  VGS+V
Sbjct: 15  FTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPL--VPGHEIVGIVVAVGSKV 72

Query: 80  KKFKVGDEV--------------------------YGDINEKALDHPKRNGSLAEYTAVE 113
            KFKVGD V                              N K  D     G  A++  V+
Sbjct: 73  TKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVD 132

Query: 114 ENLLALK-PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAK 172
           E     K P+ L    AA L  A  T Y  L+R+    GK + V+G  GG+G + ++ AK
Sbjct: 133 ERF-VFKIPEGLDSAAAAPLLCAGITVYSPLKRNGVGPGKRVGVVG-IGGLGHLAVKFAK 190

Query: 173 HVFGASKVAATSSTAKLDLLRSLGADLAIDYT-KENIEDLPEKFDVVFDAVGQC---DKA 228
              GA   A + S +K +    LGAD  I     E ++      D++ D V      D  
Sbjct: 191 A-LGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGSLDLIIDTVSASHDLDPY 249

Query: 229 LKAVKEGGRVVSI 241
           L  +K GG +V +
Sbjct: 250 LSLLKPGGTLVLV 262

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 78.5 bits (194), Expect = 1e-16
 Identities = 75/277 (27%), Positives = 114/277 (41%), Gaps = 48/277 (17%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQ-VLIKVVAAALNPIDFKRMLGAFSATDSP 59
           MKA V+K  G     ++ E  V +P +++    ++KV AAA+   D     G      S 
Sbjct: 1   MKAVVFKGPG----DVRVEE-VPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP---ST 52

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG-DINE-------KALDH------------ 99
              + G++  G V +VG +V+  KVGD V              +                
Sbjct: 53  PGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYA 112

Query: 100 --PKRNGSLAEYTAV---EENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSI 154
             P  +G+ AEY  V   +  LL L P  LS   A  L     T Y G +R+    G ++
Sbjct: 113 GSPNLDGAQAEYVRVPFADGTLLKL-PDGLSDEAALLLGDILPTGYFGAKRAQVRPGDTV 171

Query: 155 LVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGA---DLAIDYTKENIED 210
            V+G  G VG   +  A+   GA++V A      +L+   +LGA   +       E + +
Sbjct: 172 AVIG-CGPVGLCAVLSAQV-LGAARVFAVDPVPERLERAAALGAEPINFEDAEPVERVRE 229

Query: 211 LPEK--FDVVFDAVGQCDKALK----AVKEGGRVVSI 241
             E    DVV +AVG    AL      V+ GG + S+
Sbjct: 230 ATEGRGADVVLEAVGG-AAALDLAFDLVRPGGVISSV 265

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 78.4 bits (194), Expect = 1e-16
 Identities = 73/262 (27%), Positives = 109/262 (41%), Gaps = 45/262 (17%)

Query: 16  LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRML-GAFSATDSPLPTIPGYDVAGVVEK 74
           L+ E     P     +V ++V A  +   D      G F       P + G++V+GVVE 
Sbjct: 9   LRVEE-RPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEA 67

Query: 75  VGSQVKKFKVGDEV---------------------------YGDINEKALDHPKRNGSLA 107
           VG  V     G  V                            G     A+  P   G   
Sbjct: 68  VGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLG----SAMRFPHVQGGFR 123

Query: 108 EYTAVEENLLALKPKNLSFVEAA-SLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTM 166
           EY  V+ +     P  LS   AA + PLA   A   + R+   AGK +LV G AG +G +
Sbjct: 124 EYLVVDASQCVPLPDGLSLRRAALAEPLAV--ALHAVNRAGDLAGKRVLVTG-AGPIGAL 180

Query: 167 VIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENI---EDLPEKFDVVFDAV 222
           V+  A+   GA+++ AT  + A L + R++GAD  ++  ++ +         FDVVF+A 
Sbjct: 181 VVAAARRA-GAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFDVVFEAS 239

Query: 223 GQ---CDKALKAVKEGGRVVSI 241
           G       AL+ V+ GG VV +
Sbjct: 240 GAPAALASALRVVRPGGTVVQV 261

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 77.5 bits (191), Expect = 3e-16
 Identities = 72/273 (26%), Positives = 103/273 (37%), Gaps = 56/273 (20%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
           +EV   +  +V IKVVA  +   D   + G      +PLP I G++ AG+VE +G  V  
Sbjct: 18  IEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP---TPLPVILGHEGAGIVESIGPGVTT 74

Query: 82  FKVGDEV-----------------------YGDI----------------NEKALDHPKR 102
            K GD+V                                             K + H   
Sbjct: 75  LKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLG 134

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAG 161
             + AEYT V E  LA    +    +   +     T Y     +A  + G +  V  G G
Sbjct: 135 TSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVF-GLG 193

Query: 162 GVGTMVIQLAKHVFGASKV-AATSSTAKLDLLRSLGADLAI---DYTKENIEDLPEK--- 214
           GVG  VI   K   GAS++ A   +  K +  + LGA   I   D  K  +E L E    
Sbjct: 194 GVGLSVIMGCK-AAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMTDG 252

Query: 215 -FDVVFDAVGQCD---KALKAVKEGGRVVSIIG 243
             D  F+ +G  D   +AL A + GG    ++G
Sbjct: 253 GVDYAFEVIGSADTLKQALDATRLGGGTSVVVG 285

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 76.0 bits (188), Expect = 7e-16
 Identities = 69/238 (28%), Positives = 104/238 (43%), Gaps = 32/238 (13%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA V ++     S  +    ++   L E  V ++V  + LN   +K  L         +
Sbjct: 1   FKALVLEKDDGGTSA-ELRE-LDESDLPEGDVTVEVHYSTLN---YKDGLAI--TGKGGI 53

Query: 61  ----PTIPGYDVAGVVEKVGSQVKKFKVGDEV----YGDINEKALDHPKRNGSLAEYTAV 112
               P +PG D+AG V  V S   +FK GD V    +G + E+        G  A+   V
Sbjct: 54  VRTFPLVPGIDLAGTV--VESSSPRFKPGDRVVLTGWG-VGER------HWGGYAQRARV 104

Query: 113 EENLLALKPKNLSFVEAASLPLATETAY---EGLERSAFSAGKS-ILVLGGAGGVGTMVI 168
           + + L   P+ LS  +A ++  A  TA      LE    + G   +LV G AGGVG++ +
Sbjct: 105 KADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAV 164

Query: 169 QLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLP---EKFDVVFDAVG 223
            L   + G   VA+T    + D LRSLGA   ID  + +    P   E++    D VG
Sbjct: 165 ALLARL-GYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTVG 221

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 71.1 bits (175), Expect = 9e-16
 Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 21/110 (19%)

Query: 29  EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV 88
             +VL++V AA +   D     G        LP I G++ AG+VE+VG  V   KVGD V
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRGEPPPV--KLPLILGHEGAGIVEEVGPGVTGLKVGDRV 58

Query: 89  YGDI-------------NEKALDHPK-----RNGSLAEYTAV-EENLLAL 119
                             E    + K      +G  AEY  V   NL+ L
Sbjct: 59  VVYPLIPCGKCAACREGRENLCPNGKFLGVHLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 75.4 bits (186), Expect = 2e-15
 Identities = 75/278 (26%), Positives = 104/278 (37%), Gaps = 63/278 (22%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV-- 79
           V +P L    VL++V  A +   D   + G       PLP I G++  G V  +G  V  
Sbjct: 18  VPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRV--PLPIILGHEGVGRVVALGGGVTT 75

Query: 80  ----KKFKVGDEV---------------------------YGDINEKALDHPKRNGSLAE 108
               +  KVGD V                           YG   E + D P  +G  AE
Sbjct: 76  DVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGH--EASCDDPHLSGGYAE 133

Query: 109 YTAVEENLLALK-PKNLSFVEAASLPLATETAYEGLER-SAFSAGKSILVLGGAGGVGTM 166
           +  +      ++ P N+    AA    A  T    L+R     AG +++V G AG +G  
Sbjct: 134 HIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLY 192

Query: 167 VIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDLPEK---------FD 216
            +  AK   GA +V     S  +L+L R  GAD  ID  +                   D
Sbjct: 193 AVAAAKL-AGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGAD 251

Query: 217 VVFDAVGQCDKALKAVKE-------GGRVVSIIGSVTP 247
           VV +A G       AV E       GG  V ++GSV P
Sbjct: 252 VVIEASG----HPAAVPEGLELLRRGGTYV-LVGSVAP 284

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 74.8 bits (184), Expect = 2e-15
 Identities = 62/177 (35%), Positives = 85/177 (48%), Gaps = 21/177 (11%)

Query: 59  PLPTIP---GYDVAGVVEKVGSQVKKFKVGDEV-YGDINEKALDHPKRNGSLAEYTAVEE 114
           P P++P   G + AGVV KVGS VK  KVGD V Y    + AL      G+ +    V  
Sbjct: 53  PPPSLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYA---QSAL------GAYSSVHNVPA 103

Query: 115 NLLALKPKNLSFVEAASLPLATETAYEGLERS-AFSAGKSILVLGGAGGVGTMVIQLAKH 173
           +  A+ P  +SF +AA+  L   T Y  L ++      +  L    AGGVG +  Q AK 
Sbjct: 104 DKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAK- 162

Query: 174 VFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI-EDLPE-----KFDVVFDAVGQ 224
             GA  +    S  K    +  GA   I+Y +ENI E + E     K  VV+D+VG+
Sbjct: 163 ALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGK 219

Length = 327

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 70.8 bits (174), Expect = 2e-15
 Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 9/98 (9%)

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK------F 215
           GVG   +QLAK +  A  +A   S  KL+L + LGAD  I+Y  E+  +   +       
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRGV 60

Query: 216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS 250
           DVV D VG     ++AL+ ++ GGRVV +      P  
Sbjct: 61  DVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVP 98

Length = 131

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 74.2 bits (183), Expect = 3e-15
 Identities = 76/275 (27%), Positives = 112/275 (40%), Gaps = 44/275 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA+     G    +        +P    +  +++  A A    D   + G   A     
Sbjct: 1   MKAFAMLGIGKVGWI-----EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGG--APGERH 53

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVY-GDIN-----EKALD-HPK------------ 101
             I G++  GVVE+VGS+VK FK GD V    I        A   +P             
Sbjct: 54  GMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFS 113

Query: 102 --RNGSLAEYTAVEE---NLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILV 156
             ++G  AEY  V +   NL A  P  L+  +A  LP    T + G E +    G ++ V
Sbjct: 114 NFKDGVFAEYFHVNDADANL-APLPDGLTDEQAVMLPDMMSTGFHGAELANIKLGDTVAV 172

Query: 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGADLAIDYTK----ENIEDL 211
            G  G VG M +  A+   GA ++ A  S    ++L +  GA   +DY      E I  L
Sbjct: 173 FG-IGPVGLMAVAGARLR-GAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKL 230

Query: 212 P--EKFDVVFDAVGQCD---KALKAVKEGGRVVSI 241
              +  D V  A G  D   +ALK +K GG + ++
Sbjct: 231 TGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNV 265

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 74.1 bits (182), Expect = 5e-15
 Identities = 70/234 (29%), Positives = 98/234 (41%), Gaps = 52/234 (22%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP----------LPTIPGYDVAGV 71
           V VP+L+ D++LI+V A  +   D          TD             P + G++ +GV
Sbjct: 44  VPVPNLKPDEILIRVKACGICGSDIH-----LYETDKDGYILYPGLTEFPVVIGHEFSGV 98

Query: 72  VEKVGSQVKKFKVGDEVYGD---------------------INEKALDHPKRNGSLAEYT 110
           VEK G  VK F+ GD V  +                     + E        +G+ AEY 
Sbjct: 99  VEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSA---DGAFAEYI 155

Query: 111 AVEE-------NLLALKPKNLSFVEAASLPLATETAYEGL-ERSA-FSAGKSILVLGGAG 161
           AV          L  +  ++ +F EA +L   T  AY GL  R   F  G  ++V G AG
Sbjct: 156 AVNARYAWEINELREIYSEDKAF-EAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYG-AG 213

Query: 162 GVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDLPEK 214
            +G   I LAK   GASKV A   S  + +L + +GAD   + TK       EK
Sbjct: 214 PIGLAAIALAKAA-GASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEK 266

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 73.0 bits (180), Expect = 9e-15
 Identities = 70/274 (25%), Positives = 100/274 (36%), Gaps = 58/274 (21%)

Query: 21  NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS-PLPTIPGYDVAGVVEKVGSQV 79
            V++   R  +VL+++ A  +   D        S  D    P + G++ AG+VE VG  V
Sbjct: 19  EVDLDPPRAGEVLVRITATGVCHTD----AHTLSGDDPEGFPAVLGHEGAGIVEAVGEGV 74

Query: 80  KKFKVGDEV--------------------YGD-------------------INEKALDHP 100
              K GD V                      +                    N   + H 
Sbjct: 75  TSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHY 134

Query: 101 KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGG 159
               + AEYT V E  L     +    +A  L     T    +  +A    G ++ V G 
Sbjct: 135 LGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG- 193

Query: 160 AGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGA-----DLAIDYTKENIEDL-P 212
            GGVG   IQ AK   GA ++ A   +  KL+L +  GA        +D   E I +L  
Sbjct: 194 LGGVGLAAIQGAKAA-GAGRIIAVDINPEKLELAKKFGATHFVNPKEVDDVVEAIVELTD 252

Query: 213 EKFDVVFDAVGQC---DKALKAVKEGGRVVSIIG 243
              D  F+ VG      +AL+A   GG  V IIG
Sbjct: 253 GGADYAFECVGNVEVMRQALEATHRGGTSV-IIG 285

Length = 366

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 72.8 bits (179), Expect = 1e-14
 Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 32/208 (15%)

Query: 63  IPGYDVAGVVEKVGSQVKKFKVGDEV-------------YGDINEKALDHPKRN------ 103
           I G++  G+V++VG  V   KVGD V             Y     + L    +N      
Sbjct: 56  ILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVD 115

Query: 104 GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGV 163
           G +AE   V  +     P+ L   +A+S+  A  T Y+ ++ S    G+ I + G AGG+
Sbjct: 116 GGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAIKVSGIKPGQWIAIYG-AGGL 174

Query: 164 GTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFD------- 216
           G + +Q AK+VF A  +A   +  KL L + +GADL I+  +   ED+ +          
Sbjct: 175 GNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRV--EDVAKIIQEKTGGAH 232

Query: 217 -VVFDAVGQC--DKALKAVKEGGRVVSI 241
             V  AV +   ++A+ AV+ GGRVV++
Sbjct: 233 AAVVTAVAKAAFNQAVDAVRAGGRVVAV 260

Length = 338

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 70.8 bits (174), Expect = 4e-14
 Identities = 70/231 (30%), Positives = 104/231 (45%), Gaps = 26/231 (11%)

Query: 27  LREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL----PTIPGYDVAGVVEKVGSQVKKF 82
           L E  VLI+V  +++N  D     G  S     +    P IPG D+AG V  V S   +F
Sbjct: 25  LPEGDVLIRVAYSSVNYKD-----GLASIPGGKIVKRYPFIPGIDLAGTV--VESNDPRF 77

Query: 83  KVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETA--- 139
           K GDEV     +  + H   +G  +EY  V    +   PK L+  EA  L  A  TA   
Sbjct: 78  KPGDEVIVTSYDLGVSH---HGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALS 134

Query: 140 YEGLERSAFS-AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD 198
              LE +  +     +LV G  GGVG++ + +   + G   VA+T      D L+ LGA 
Sbjct: 135 IHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKL-GYEVVASTGKADAADYLKKLGAK 193

Query: 199 LAI---DYTKENIEDL-PEKFDVVFDAVG--QCDKALKAVKEGGRVVSIIG 243
             I   +  +E+I+ L  +++    D VG       L  ++ GG  V++ G
Sbjct: 194 EVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGG-SVAVSG 243

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 69.4 bits (170), Expect = 2e-13
 Identities = 72/254 (28%), Positives = 108/254 (42%), Gaps = 47/254 (18%)

Query: 24  VPSLREDQVLIKVVAAALNPID---FKRM-LGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79
           +P L    V +++ A  +   D    K M    F   +   P + G++ AG++E+VGS+V
Sbjct: 36  LPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKE---PMVIGHECAGIIEEVGSEV 92

Query: 80  KKFKVGDEVY---------------GDIN----EKALDHPKRNGSLAEYTAVEENLLALK 120
           K   VGD V                G  N     K    P  +GSLA       +L    
Sbjct: 93  KHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL 152

Query: 121 PKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P+N+S  E A   PL+         R+      ++LV+ GAG +G +V  LA   FGA +
Sbjct: 153 PENVSLEEGAMCEPLS--VGVHACRRANIGPETNVLVM-GAGPIG-LVTMLAARAFGAPR 208

Query: 180 VAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEK-----------FDVVFDAVG---Q 224
           +        +L + + LGAD  +  +  NIED+  +            DV FD VG    
Sbjct: 209 IVIVDVDDERLSVAKQLGADEIVLVST-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKT 267

Query: 225 CDKALKAVKEGGRV 238
              AL+A + GG+V
Sbjct: 268 MSTALEATRAGGKV 281

Length = 364

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 66.2 bits (162), Expect = 2e-12
 Identities = 70/253 (27%), Positives = 100/253 (39%), Gaps = 40/253 (15%)

Query: 22  VEVPSLREDQVLIKVVA---------AALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVV 72
           V  P     QVL+KV+A         A  +P       G  S  D     + G++  G V
Sbjct: 16  VPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEV 75

Query: 73  EKVGSQV-KKFKVGDEV---------YGDINEKALDHPKRNGSLAEYTAVEENLLALKPK 122
              G    +K KVG  V          G      L  P+  G  AEY  + E LL   P 
Sbjct: 76  VDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGL-SPEAPGGYAEYMLLSEALLLRVPD 134

Query: 123 NLSFVEAASL--PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK- 179
            LS +E A+L  PLA       + R+  + G+  LV+ G G +G  VI   K   G    
Sbjct: 135 GLS-MEDAALTEPLA--VGLHAVRRARLTPGEVALVI-GCGPIGLAVIAALK-ARGVGPI 189

Query: 180 VAATSSTAKLDLLRSLGADLAID------YTKENIED---LPEKFDVVFDAVGQ---CDK 227
           VA+  S  +  L  ++GAD+ +D      +     E       K  V+F+ VG      +
Sbjct: 190 VASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQ 249

Query: 228 ALKAVKEGGRVVS 240
            ++    GGR+V 
Sbjct: 250 IIEGAPPGGRIVV 262

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 64.3 bits (157), Expect = 9e-12
 Identities = 77/295 (26%), Positives = 111/295 (37%), Gaps = 62/295 (21%)

Query: 1   MKAWVYKE------YGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS 54
           M+A V +E      Y +S+  L  E  VE+      +VL+K+ AA L   D   + G   
Sbjct: 1   MRAAVLRETGAPTPYADSRP-LVIEE-VELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP 58

Query: 55  ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV------------YGDINEKALDHP-- 100
               PLP   G++ AGVV +VG  V   +VGD V                   AL  P  
Sbjct: 59  ---RPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGA 115

Query: 101 ----------------KRNGSL---------AEYTAVEENLLALKPKNLSFVEAASLPLA 135
                            R G +         AEY  V    +    K++    AA    A
Sbjct: 116 AANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCA 175

Query: 136 TETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLR 193
             T    +  +A    G+S+ V+ G GGVG   + L     GAS+V A   +  KL L R
Sbjct: 176 VLTGVGAVVNTAGVRPGQSVAVV-GLGGVGLSAL-LGAVAAGASQVVAVDLNEDKLALAR 233

Query: 194 SLGADLAIDYTKENIEDLPEKF-----DVVFDAVGQC---DKALKAVKEGGRVVS 240
            LGA   ++    N  +   +      D  F+  G     + A +  + GG  V+
Sbjct: 234 ELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVT 288

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 62.9 bits (153), Expect = 3e-11
 Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 42/232 (18%)

Query: 26  SLRE---DQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
           +LR+   + V+IKV+   +   D  ++      ++ P+  +PG++V G V +VGS V KF
Sbjct: 28  TLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPM--VPGHEVVGEVVEVGSDVSKF 85

Query: 83  KVGDEV-----------------------------YGDINEKALDHPKRNGSLAEYTAVE 113
            VGD V                             Y D+     D     G  A    V+
Sbjct: 86  TVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYT---DGKPTQGGFASAMVVD 142

Query: 114 ENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG--GAGGVGTMVIQLA 171
           +  +   P+ ++  +AA L  A  T Y  L  S F   +S L  G  G GGVG M +++A
Sbjct: 143 QKFVVKIPEGMAPEQAAPLLCAGVTVYSPL--SHFGLKQSGLRGGILGLGGVGHMGVKIA 200

Query: 172 KHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPEKFDVVFDAV 222
           K +     V ++S   + + L  LGAD   +      +++  +  D + D V
Sbjct: 201 KAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLDYIIDTV 252

Length = 357

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 72/264 (27%), Positives = 105/264 (39%), Gaps = 51/264 (19%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQ-VLIKVVAAALNPIDFKRMLGAFSATDSP 59
           MKA VY   GN  +V     +V  P +      ++++   A+   D     G   A    
Sbjct: 1   MKAVVYGGPGNV-AV----EDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA---E 52

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVY--------GDINEKALD-------HPKRNG 104
              + G++  G VE+VGS V+  KVGD V            N K          +P R G
Sbjct: 53  PGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAG 112

Query: 105 SL-------------AEYTAV---EENLLALKPKNLSFVEAASLPLATE--TAYEGLERS 146
                          AEY  V   + NLL L  ++ +  +   L L+    T + GLE +
Sbjct: 113 GAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGLELA 172

Query: 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV-AATSSTAKLDLLRSLGADLAIDYTK 205
               G ++ V  GAG VG M    A  + GAS+V        +LDL  S+GA + ID++ 
Sbjct: 173 GVQPGDTVAVF-GAGPVGLMAAYSAI-LRGASRVYVVDHVPERLDLAESIGA-IPIDFSD 229

Query: 206 EN-----IEDLPEKFDVVFDAVGQ 224
            +     +   P   D   D VG 
Sbjct: 230 GDPVEQILGLEPGGVDRAVDCVGY 253

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score = 60.8 bits (148), Expect = 1e-10
 Identities = 76/267 (28%), Positives = 111/267 (41%), Gaps = 51/267 (19%)

Query: 2   KAWVYKEY---GNSQSVLKFETN---VEVPSLREDQVLIKVVAAALNPIDFKRM----LG 51
           K  + K Y      +S L+  T    ++VP      VL+K +  + +P    RM      
Sbjct: 4   KQVILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS 63

Query: 52  AFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTA 111
            +     P   I GY VA VV+   S    FKVGD V+G                  +T 
Sbjct: 64  LYLPPFKPGEVITGYGVAKVVD---SGNPDFKVGDLVWG------------------FTG 102

Query: 112 VEENLLALKPKNLSFVEAASLPLATE---------TAYEGL-ERSAFSAGKSILVLGGAG 161
            EE  L  + ++L  ++   +PL+           TAY G  E      G+++ V   +G
Sbjct: 103 WEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASG 162

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIED------LPEK 214
            VG +V QLAK + G   V +  S  K+DLL++ LG D A +Y +E   D       P  
Sbjct: 163 AVGQLVGQLAK-LKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNG 221

Query: 215 FDVVFDAVG--QCDKALKAVKEGGRVV 239
            D+ FD VG    D  L  +   GR+ 
Sbjct: 222 IDIYFDNVGGKMLDAVLLNMNLHGRIA 248

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 25/230 (10%)

Query: 25  PSLREDQVLIKVVAAALNPIDFKRMLGAFSATD--SPLPTIPGYDVAGVVEKVGSQVKKF 82
             L E QVL++ +  +++P    RM    + TD  +P       D  GV     S+ +KF
Sbjct: 32  DELNEGQVLVRTLYLSVDPYMRCRM-NEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKF 90

Query: 83  KVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLS-FVEAASLPLATETAYE 141
            VGD V       + + P +  ++ + +++E+    L   +LS F+ A  LP    TA  
Sbjct: 91  AVGDIV------TSFNWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGL--TALI 142

Query: 142 GLERSAF---SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRS-LG 196
           G++        A ++++V G AG  G++  Q+   + G S+V     S  K  LL+S LG
Sbjct: 143 GIQEKGHITPGANQTMVVSGAAGACGSLAGQIG-RLLGCSRVVGICGSDEKCQLLKSELG 201

Query: 197 ADLAIDYTKENI-----EDLPEKFDVVFDAVGQ--CDKALKAVKEGGRVV 239
            D AI+Y  +N+     E  PE  DV FD VG    D  +  + E   ++
Sbjct: 202 FDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHII 251

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 57.0 bits (138), Expect = 2e-10
 Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 19/103 (18%)

Query: 195 LGADLAIDYTKENIEDL--PEKFDVVFDAVG--QCDKALKAVKEGGRVVSIIGSVTPPAS 250
           LGAD  IDYT E+ E+    E  DVV D VG     +AL A+K GGR+VSI G     + 
Sbjct: 1   LGADEVIDYTTEDFEEATAGEGVDVVLDTVGGETLLRALLALKPGGRLVSIGGPDLLLSV 60

Query: 251 SFVL---------------TSDGSILEKLNPYFESGKVKAIID 278
           +                     G+ L +L    E+GK++ +ID
Sbjct: 61  AAKAGGRGVRGVFLFPVSPGEAGADLAELAELVEAGKLRPVID 103

Length = 129

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 58.6 bits (142), Expect = 7e-10
 Identities = 64/263 (24%), Positives = 104/263 (39%), Gaps = 59/263 (22%)

Query: 17  KFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS----ATDSPL---PTIPGYDVA 69
           + E  V VP     ++L+KV A  +   D K   GA S        P    P IPG++  
Sbjct: 13  RLEE-VPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFV 71

Query: 70  GVVEKVGSQVKK--FKVGDEV---------------------------YGDINEKALDHP 100
           G V ++G   ++   KVGD V                           YG  N       
Sbjct: 72  GRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNV----- 126

Query: 101 KRNGSLAEYTAVEENLLALK-PKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLG 158
             NG +AEY    +  +  K P ++   +A  + PLA   A   ++R+       ++VL 
Sbjct: 127 --NGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPLAC--ALHAVDRANIKFD-DVVVLA 181

Query: 159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN----IEDLPEK 214
           GAG +G  +I  A+       +       +L L R  GAD+ ++  + +    I++L   
Sbjct: 182 GAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEKIKELTGG 241

Query: 215 F--DVVFDAVGQCDKALKAVKEG 235
           +  D+  +A G       AV++G
Sbjct: 242 YGCDIYIEATG----HPSAVEQG 260

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 58.0 bits (140), Expect = 1e-09
 Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 28/165 (16%)

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDI--------------------------NE 94
           P +PG+++ G+V K+G  VKKFK GD V   +                          N 
Sbjct: 67  PIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNS 126

Query: 95  KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSI 154
              D  K  G  ++   V+++ +   P NL     A L  A  T Y  ++    +     
Sbjct: 127 IGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKH 186

Query: 155 LVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGAD 198
           L + G GG+G + +++ K  FG    V ++SS  + + +  LGAD
Sbjct: 187 LGVAGLGGLGHVAVKIGK-AFGLKVTVISSSSNKEDEAINRLGAD 230

Length = 360

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 34/212 (16%)

Query: 62  TIPGYDVAGVVEKVGSQVKKFKVGDEV------------------YGDINEKA--LDHPK 101
            I G++  GVVE+VGS V  FKVGD V                  Y         L +  
Sbjct: 56  RILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGN-L 114

Query: 102 RNGSLAEYTAV--EENLLALKPKNLSFVEAASLPLATETAYE-GLERSAFSAGKSILVLG 158
            +G+ AEY  +   +N L   P+ +    A  L     T YE G+       G ++ ++G
Sbjct: 115 IDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVG 174

Query: 159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------P 212
            AG VG   +  A+    +  +       +L++ + LGA   ++  K +  +        
Sbjct: 175 -AGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDG 233

Query: 213 EKFDVVFDAVG---QCDKALKAVKEGGRVVSI 241
              DVV +AVG     +   + V  GG + ++
Sbjct: 234 RGVDVVIEAVGIPATFELCQELVAPGGHIANV 265

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 56.4 bits (137), Expect = 3e-09
 Identities = 75/319 (23%), Positives = 114/319 (35%), Gaps = 87/319 (27%)

Query: 21  NVEVPSLREDQ-VLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79
            V  P + +    +++V A A+   D     G           I G++  GVVE+VG +V
Sbjct: 16  EVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKG--DILGHEFMGVVEEVGPEV 73

Query: 80  KKFKVGDEV------------------YG---DINEKALDHPKR---------------- 102
           +  KVGD V                  Y    + N  A                      
Sbjct: 74  RNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGG 133

Query: 103 -NGSLAEYTAV---EENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG 158
             G  AEY  V   +     + P +LS  +A  L     T Y   E +    G ++ V  
Sbjct: 134 YAGGQAEYVRVPFADVGPFKI-PDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVW- 191

Query: 159 GAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKF-- 215
           G G VG    + AK   GA +V A      +L++ RS      I++ +   +D+ E    
Sbjct: 192 GCGPVGLFAARSAKL-LGAERVIAIDRVPERLEMARSHLGAETINFEEV--DDVVEALRE 248

Query: 216 -------DVVFDAVG------------------QCDK------ALKAVKEGGRVVSIIGS 244
                  DV  DAVG                  + D+      A++AV++GG  VSIIG 
Sbjct: 249 LTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGT-VSIIGV 307

Query: 245 VTPPASSFVLTSDGSILEK 263
                + F +   G+ + K
Sbjct: 308 YGGTVNKFPI---GAAMNK 323

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 56.0 bits (135), Expect = 6e-09
 Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 15  VLKFETNVEV-----PSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDV 68
           V   +  V V     P ++ +D VL+KV ++ L   D  R+   F       P   G++ 
Sbjct: 5   VNDTDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRI---FKNGAHYYPITLGHEF 61

Query: 69  AGVVEKVGSQVKKFKVGDEV------------------YGDINEKALDHPKRNGSLAEYT 110
           +G VE VGS V     GD V                  Y    +      +R+G  AEY 
Sbjct: 62  SGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYI 121

Query: 111 AVEE-NLLALKP----KNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGT 165
            V+  NL AL      ++ +F+E  ++ L      +G E      GK+++++G AG +G 
Sbjct: 122 VVKRKNLFALPTDMPIEDGAFIEPITVGLHAFHLAQGCE------GKNVIIIG-AGTIGL 174

Query: 166 MVIQLAKHVFGASKVAATS-STAKLDLLRSLGAD 198
           + IQ A    GA  V A   ++ KL L +SLGA 
Sbjct: 175 LAIQCAV-ALGAKSVTAIDINSEKLALAKSLGAM 207

Length = 347

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 55.6 bits (135), Expect = 7e-09
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)

Query: 21 NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
          +VE+   R D+VL+++VA  +   D   ++       +PLP + G++ AGVVE VGS V 
Sbjct: 19 DVELDDPRPDEVLVRIVATGICHTD---LVVRDGGLPTPLPAVLGHEGAGVVEAVGSAVT 75

Query: 81 KFKVGDEV 88
            K GD V
Sbjct: 76 GLKPGDHV 83

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 11/172 (6%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A V+ ++G+   VL+    V  P+    +VL++   + ++  D   + G +      L
Sbjct: 1   MRAAVHTQFGDPADVLE-IGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTY-GYKPEL 58

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P I G +  GVV+ VG  VK  +VG  V           P   G+ AEY     + L   
Sbjct: 59  PAIGGSEAVGVVDAVGEGVKGLQVGQRVAV--------APVH-GTWAEYFVAPADGLVPL 109

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAK 172
           P  +S   AA L     +A   L+      G+ ++     G VG +V  LA 
Sbjct: 110 PDGISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAA 161

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 74/298 (24%), Positives = 107/298 (35%), Gaps = 61/298 (20%)

Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLP 61
           KA V  E G    +   E  V  P   E  V IK++A ++   D   + G  +   +  P
Sbjct: 4   KAAVAWEAGKPLVIE--EIEVAPPKANE--VRIKMLATSVCHTDILAIEGFKA---TLFP 56

Query: 62  TIPGYDVAGVVEKVGSQVKKFKVGDEVY-----------------------GDINEKAL- 97
            I G++ AG+VE VG  V   K GD+V                           NE  L 
Sbjct: 57  VILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLM 116

Query: 98  -DHPKR-------------NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL 143
            D   R               + ++YT V+EN +A             L     T Y   
Sbjct: 117 PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAA 176

Query: 144 ERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAI 201
             +A    G ++ V  G G VG   I  AK + GAS++        K +  +  GA   I
Sbjct: 177 WNTAKVEPGSTVAVF-GLGAVGLSAIMGAK-IAGASRIIGVDINEDKFEKAKEFGATDFI 234

Query: 202 ---DYTKENIEDLPEKFDVVFDAVGQC-------DKALKAVKEGGRVVSIIGSVTPPA 249
              D  K   E + E      D   +C       ++AL++ K G  V  ++G   PP 
Sbjct: 235 NPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVG--VPPG 290

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score = 52.3 bits (125), Expect = 7e-08
 Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 11/118 (9%)

Query: 138 TAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG 196
           TAY GL E      G++++V   AG VG++V Q+AK + G   V A  S  K+  L+ LG
Sbjct: 125 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAK-LKGCKVVGAAGSDEKVAYLKKLG 183

Query: 197 ADLAIDY-TKENIEDL-----PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT 246
            D+A +Y T +++E+      P+ +D  FD VG    +  +  +K+ GR ++I G+++
Sbjct: 184 FDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGR-IAICGAIS 240

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 59/190 (31%), Positives = 89/190 (46%), Gaps = 20/190 (10%)

Query: 61  PTIPGYDVAG--VVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLA 118
           P +PG  + G  V + V S    FK GD + G    +     + + +      +++++  
Sbjct: 73  PFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKIQLQDDI-- 130

Query: 119 LKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA 177
                LS+     L +A  TAY G  E  +   G S+ V   +G VG +V QLAK + G 
Sbjct: 131 ----PLSY-HLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAK-LHGC 184

Query: 178 SKVAATSSTAKLDLLRS-LGADLAIDYTKENIED------LPEKFDVVFDAVG--QCDKA 228
             V +  S+ K+DLL++ LG D A +Y +E   D       PE  D+ FD VG    D A
Sbjct: 185 YVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAA 244

Query: 229 LKAVKEGGRV 238
           L  +K  GR+
Sbjct: 245 LLNMKIHGRI 254

Length = 348

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 45/194 (23%), Positives = 77/194 (39%), Gaps = 30/194 (15%)

Query: 58  SPLPTIPGYDVAGVVEKVGSQVKKFKVGD--------------------------EVYGD 91
           S  P IPG+++ G+  KVG  V KFK GD                          +V   
Sbjct: 58  SRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFT 117

Query: 92  INEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFS-- 149
            N ++ D  +  G  ++   V+   +   P  L     A L  A  T Y  ++    +  
Sbjct: 118 YNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKE 177

Query: 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKENI 208
           +GK + V  G GG+G + +++ K       V + SS  + + +  LGAD   +    + +
Sbjct: 178 SGKRLGV-NGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKM 236

Query: 209 EDLPEKFDVVFDAV 222
           ++     D + D V
Sbjct: 237 KEAVGTMDFIIDTV 250

Length = 375

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
          +EV   +  +V IK+VA  +   D   + G      +P P I G++ AG+VE VG  V  
Sbjct: 25 IEVAPPKAHEVRIKIVATGICRSDDHVVSGKL---VTPFPVILGHEAAGIVESVGEGVTT 81

Query: 82 FKVGDEV 88
           K GD+V
Sbjct: 82 VKPGDKV 88

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 61/286 (21%), Positives = 103/286 (36%), Gaps = 59/286 (20%)

Query: 21  NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYD-------VAGVVE 73
           ++  P     +VL++ +   +   D  R + A     +P    PG D         GVVE
Sbjct: 17  DIPEPEPTPGEVLVRTLEVGVCGTD--REIVAGEYGTAP----PGEDFLVLGHEALGVVE 70

Query: 74  KVGSQVKKFKVGDEVY-------GDINEKALDHP--------------KRNGSLAEYTAV 112
           +VG        GD V        G      +  P                +G + EY   
Sbjct: 71  EVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVD 129

Query: 113 EENLLALKPKNLSFVEAASL--PL-----ATETAYEGLERSAFSAGKSILVLGGAGGVG- 164
           +   L   P +L+  +   L  PL     A E A    +R      +  LVLG AG +G 
Sbjct: 130 DPEYLVKVPPSLA--DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLG-AGPIGL 186

Query: 165 --TMVI-QLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED--LPEKFDVVF 219
              +++      V+  ++       A  D++  LGA   ++ +K  + +  L  +FD++ 
Sbjct: 187 LAALLLRLRGFEVYVLNRRDPPDPKA--DIVEELGATY-VNSSKTPVAEVKLVGEFDLII 243

Query: 220 DAVGQCD---KALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILE 262
           +A G      +AL A+   G  V I+  V      F +       +
Sbjct: 244 EATGVPPLAFEALPALAPNG--VVILFGVPGGGREFEVDGGELNRD 287

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 74/316 (23%), Positives = 113/316 (35%), Gaps = 77/316 (24%)

Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP-- 59
           KA V    G    V      +E+   +  +VL+K+VA+ L   D   + G     D P  
Sbjct: 3   KAAVLWGPGQPWEV----EEIELDDPKAGEVLVKLVASGLCHSDEHLVTG-----DLPMP 53

Query: 60  -LPTIPGYDVAGVVEKVGSQVKKFKV--------------------GDEVYGDINEKALD 98
             P + G++ AGVV KVG  V   K                     G +   D+    L 
Sbjct: 54  RYPILGGHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLT 113

Query: 99  HPKRN-------------------GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETA 139
             + +                   G+ +EYT V E  +     ++   +A  +     T 
Sbjct: 114 GSQISDGTYRFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTG 173

Query: 140 YEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGA 197
           +      A    G +++V+G  GGVG   +Q A    GA KV A      K +     GA
Sbjct: 174 WGSAVNIADVRPGDTVVVMG-IGGVGINAVQGAAVA-GARKVIAVDPVEFKREQALKFGA 231

Query: 198 DLAIDYTKENIEDLPEKF---------DVVFDAVGQCD-----KALKAVKEGGRVV---- 239
             A      ++E+  +           D     VG+ D     +AL A ++GGRVV    
Sbjct: 232 THAF----ASMEEAVQLVRELTNGQGADKTIITVGEVDGEHIAEALSATRKGGRVVVTGL 287

Query: 240 SIIGSVTPPASSFVLT 255
             +  V    + F LT
Sbjct: 288 GPMADVDVKVNLFELT 303

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 46.7 bits (111), Expect = 5e-06
 Identities = 71/276 (25%), Positives = 110/276 (39%), Gaps = 57/276 (20%)

Query: 19  ETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78
           E +VE+P  ++ +VL+++VA  +   D   + GA    +   P I G++ AG+VE VG  
Sbjct: 18  EVDVEMP--QKGEVLVRIVATGVCHTDAFTLSGA--DPEGVFPVILGHEGAGIVEAVGEG 73

Query: 79  VKKFKVGDEVYG---------------------------------------DINEKALDH 99
           V   KVGD V                                           + + + H
Sbjct: 74  VTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYH 133

Query: 100 PKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLG 158
                + +EYT V E  LA         E   L     T    +  +A    G ++ V  
Sbjct: 134 YMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVF- 192

Query: 159 GAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAI---DYTK---ENIEDL 211
           G GG+G  VIQ A+    AS++ A   + AK +L + LGA   +   DY K   E I ++
Sbjct: 193 GLGGIGLSVIQGARMA-KASRIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEI 251

Query: 212 PE-KFDVVFDAVGQCD---KALKAVKEGGRVVSIIG 243
            +   D  F+ +G  +    AL+   +G     IIG
Sbjct: 252 TDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIG 287

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 46.4 bits (110), Expect = 8e-06
 Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 38/226 (16%)

Query: 19  ETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF---SATDSPLPTIPGYDVAGVVEKV 75
           +T VE+P L    V++KV    +   D    L  +     T+  LP   G++++G V + 
Sbjct: 13  KTRVEIPELGAGDVVVKVAGCGVCHTD----LSYYYMGVRTNHALPLALGHEISGRVIQA 68

Query: 76  GSQVKKFKVGDEV-----------------YGDI-NEKALDHPKRNGSLAEYTAVEENLL 117
           G+    + +G  V                  G I   + +      G  A +  V    L
Sbjct: 69  GAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGL 127

Query: 118 ALKPKNLSFVEAASLPL--------ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQ 169
                + + + AA LPL        A  T Y+   ++    G  ++V+G AGGVG  ++Q
Sbjct: 128 C--VVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQAGLKKGDLVIVIG-AGGVGGYMVQ 184

Query: 170 LAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF 215
            AK   GA+ VA      KL++++  GADL ++   ++  ++ +  
Sbjct: 185 TAK-AMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLI 229

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 5e-05
 Identities = 46/211 (21%), Positives = 78/211 (36%), Gaps = 35/211 (16%)

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV---------------YGDINE--------KAL 97
           P + G++V G +    S     K G  V                 + N+         A+
Sbjct: 60  PMVLGHEVIGKIVHSDS--SGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAM 117

Query: 98  DHPKRNGSLAEYTAVEENLLALKPKNLSF-VEAASLPLATETAYEGLERSAFSAGKSILV 156
             P  +G    Y  V+       P+     V A + PLA   A     ++    GK + V
Sbjct: 118 YFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPLAV--AIHAAHQAGDLQGKRVFV 175

Query: 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK-- 214
            G  G +G +++   K +  A  V A  S   L L R +GAD  ++   ++++    +  
Sbjct: 176 SG-VGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKG 234

Query: 215 -FDVVFDAVGQCD---KALKAVKEGGRVVSI 241
            FDV F+  G        L+  +  G +V +
Sbjct: 235 YFDVSFEVSGHPSSINTCLEVTRAKGVMVQV 265

Length = 343

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 43.8 bits (103), Expect = 5e-05
 Identities = 73/272 (26%), Positives = 102/272 (37%), Gaps = 36/272 (13%)

Query: 3   AWVYKEYGNSQS-VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLP 61
           AW  +  G  +   L+F     VP     ++L++V A  +   D     G        + 
Sbjct: 1   AWEVERPGPIEDGPLRFVER-PVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRV- 58

Query: 62  TIPGYDVAGVVEKVGSQVKKFKVGDEV-------------YGDINEKALDHPKR------ 102
             PG++V G V   G+    F VGD V             Y     + L    R      
Sbjct: 59  -TPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDT 117

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGG 162
           +G  AEYT V        P     VE A L  A    Y  L R++   G   L L G GG
Sbjct: 118 DGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASLPPG-GRLGLYGFGG 176

Query: 163 VGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFD--VVFD 220
              +  Q+A    GA+    T   A   L  +LGA  A        +  PE  D  ++F 
Sbjct: 177 SAHLTAQVAL-AQGATVHVMTRGAAARRLALALGAASAGGAY----DTPPEPLDAAILFA 231

Query: 221 AVGQ-CDKALKAVKEGGRVVSIIG---SVTPP 248
             G     AL+A+  GG V+++ G   + TPP
Sbjct: 232 PAGGLVPPALEALDRGG-VLAVAGIHLTDTPP 262

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 43.6 bits (103), Expect = 6e-05
 Identities = 56/241 (23%), Positives = 95/241 (39%), Gaps = 43/241 (17%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MK   ++ YG  +  L+ E   E+P + +D++L++V++ +L    +K    A   +D   
Sbjct: 1   MKTKAWRMYG--KGDLRLEKF-ELPEIADDEILVRVISDSLCFSTWKL---ALQGSDHKK 54

Query: 61  --------PTIPGYDVAGVVEKVGSQVK-KFKVGDE--VYGDINEK-ALDHP----KRNG 104
                   P I G++ AG + KVG + + K+K G    +   +        P       G
Sbjct: 55  VPNDLAKEPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPG 114

Query: 105 SLAEYTAVEENLLA----LKPKNLSFVEAASL-PLA------------TETAYEGLERSA 147
            LA Y  +   ++     L  +   + EA+ + PL+                Y    R  
Sbjct: 115 GLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYR--HRMG 172

Query: 148 FSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATS-STAKLDLLRSLGADLAIDYTK 205
              G +  +LGGAG +G M I  A H   G S +  T  +  +L   + L    A     
Sbjct: 173 IKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGI 232

Query: 206 E 206
           E
Sbjct: 233 E 233

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 73/272 (26%), Positives = 105/272 (38%), Gaps = 52/272 (19%)

Query: 20  TNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79
             + VP     +V++ + A  +   D     G  +      P + G++ AGVVE VG  V
Sbjct: 17  ETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN---DEFPFLLGHEAAGVVEAVGEGV 73

Query: 80  KKFKVGDEVYGDINEKAL---------DHPK-----RNGS----LAEYTAVEENL--LAL 119
                GD V   +N +A+           P       N +    L + T +   L   A 
Sbjct: 74  TDVAPGDYVV--LNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAF 131

Query: 120 KPKNLSFV-EAASLPLATETAYEGLERSAFSAG-------------KSILVLGGAGGVGT 165
             K L    +   +  A + A  GL      AG              S+ V+G  GGVG 
Sbjct: 132 AEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIG-CGGVGD 190

Query: 166 MVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTK----ENIEDLPEKF--DVV 218
             I  A  + GASK+ A      KL+  R  GA   ++ +     E I  L   F  DVV
Sbjct: 191 AAIAGAA-LAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVV 249

Query: 219 FDAVGQCD---KALKAVKEGGRVVSIIGSVTP 247
            DAVG+ +   +A  A    G VV ++G  TP
Sbjct: 250 IDAVGRPETYKQAFYARDLAGTVV-LVGVPTP 280

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 72/278 (25%), Positives = 101/278 (36%), Gaps = 63/278 (22%)

Query: 21  NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP--LPTIPGYDVAGVVEKVGSQ 78
            VEV   +  +V IK++A  +   D   + GA    D     P I G++ AG+VE VG  
Sbjct: 19  EVEVAPPKAGEVRIKILATGVCHTDAYTLSGA----DPEGLFPVILGHEGAGIVESVGEG 74

Query: 79  VKKFKVGDEV---YGDINE----KALDHPKRN---------------------------- 103
           V   K GD V   Y    E    K     K N                            
Sbjct: 75  VTSVKPGDHVIPLY--TPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPI 132

Query: 104 ------GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILV 156
                  + +EYT V E  +A         +   L     T Y  +  +A    G ++ V
Sbjct: 133 YHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAV 192

Query: 157 LGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAI---DYTKENIEDLP 212
             G G VG  VIQ AK   GAS++     +  K +L +  GA   +   D+ K   + L 
Sbjct: 193 F-GLGAVGLAVIQGAKAA-GASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLV 250

Query: 213 EK----FDVVFDAVGQCD---KALKAVKEGGRVVSIIG 243
           E      D  F+ +G       AL+A  +G     IIG
Sbjct: 251 EMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIG 288

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 40.2 bits (94), Expect = 6e-04
 Identities = 47/190 (24%), Positives = 74/190 (38%), Gaps = 31/190 (16%)

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------YGDINEKALDHPKRNGSLAEYTAVE 113
           P +PGY+  G V + G     F+ GD V       Y D+        KR  + A      
Sbjct: 59  PLVPGYESVGRVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRL 117

Query: 114 ENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKH 173
           +   AL P      + A L LA  TA   +   A       L++ G G +G ++ +L K 
Sbjct: 118 DP--ALGP------QGALLALAA-TARHAVA-GAEVKVLPDLIV-GHGTLGRLLARLTK- 165

Query: 174 VFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK-FDVVFDAVGQ---CDKAL 229
             G S  A   +  +         D A  Y   + E  P + +  ++DA G     D  +
Sbjct: 166 AAGGSPPAVWETNPRR-------RDGATGYEVLDPEKDPRRDYRAIYDASGDPSLIDTLV 218

Query: 230 KAVKEGGRVV 239
           + + +GG +V
Sbjct: 219 RRLAKGGEIV 228

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 44/221 (19%), Positives = 83/221 (37%), Gaps = 40/221 (18%)

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGD-INEKALDHP-----------------KR 102
           P + G++  GV++ VG  V   ++G+ V  D +      +P                  R
Sbjct: 54  PRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHR 113

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKS------ILV 156
           +G  +EY  V        P   +     ++        E    +A   G++      + +
Sbjct: 114 DGGFSEYAVV--------PAKNAHRIPDAIADQYAVMVEPFTIAANVTGRTGPTEQDVAL 165

Query: 157 LGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLAIDYTKENIEDLPEKF 215
           + GAG VG  ++Q+ K V+    V        +L L +  GAD  I+  +E + +  E+ 
Sbjct: 166 IYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEK 225

Query: 216 DV----VFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA 249
            +    + DA       ++A+       R+V +  S  P  
Sbjct: 226 GIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSE 266

Length = 339

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)

Query: 9  YGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDV 68
          +G  ++++  E  V  P   E  + IKVV+ +L   D    L A+ +  +  P I G++ 
Sbjct: 19 WGAGEALVMEEVEVSPPQPLE--IRIKVVSTSLCRSD----LSAWESQ-ALFPRIFGHEA 71

Query: 69 AGVVEKVGSQVKKFKVGDEV 88
          +G+VE +G  V +F+ GD V
Sbjct: 72 SGIVESIGEGVTEFEKGDHV 91

Length = 378

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	284
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.98
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.98
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.98
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.98
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.97
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.97
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.97
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.97
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.97
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.97
PLN02702	364	L-idonate 5-dehydrogenase	99.97
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.97
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.97
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.97
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.97
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.97
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.97
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.97
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.97
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.97
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.97
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.96
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.96
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.95
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.93
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.91
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.88
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.75
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.44
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	98.97
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	98.92
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	98.63
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.29
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.16
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.1
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.07
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	98.0
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	97.97
PLN02494	477	adenosylhomocysteinase	97.82
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	97.78
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.78
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.74
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.61
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.5
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.47
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.45
PRK08324	681	short chain dehydrogenase; Validated	97.44
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.42
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.41
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	97.38
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.38
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.37
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.37
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.35
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	97.34
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.32
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.3
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.3
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.3
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.26
PRK12742	237	oxidoreductase; Provisional	97.22
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	97.18
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.14
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.14
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.08
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.03
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.02
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.93
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.91
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.83
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.8
PRK07060	245	short chain dehydrogenase; Provisional	96.79
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.78
PRK08317	241	hypothetical protein; Provisional	96.78
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.77
CHL00194	317	ycf39 Ycf39; Provisional	96.76
PRK06182	273	short chain dehydrogenase; Validated	96.75
PRK06057	255	short chain dehydrogenase; Provisional	96.69
PRK05993	277	short chain dehydrogenase; Provisional	96.67
PRK05872	296	short chain dehydrogenase; Provisional	96.61
PRK05693	274	short chain dehydrogenase; Provisional	96.61
PLN03209	576	translocon at the inner envelope of chloroplast su	96.61
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.61
PRK06139	330	short chain dehydrogenase; Provisional	96.61
PRK14967	223	putative methyltransferase; Provisional	96.6
PRK08177	225	short chain dehydrogenase; Provisional	96.57
PRK06949	258	short chain dehydrogenase; Provisional	96.56
PRK07825	273	short chain dehydrogenase; Provisional	96.54
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.54
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	96.53
smart00846	149	Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase,	96.51
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.5
PRK10258	251	biotin biosynthesis protein BioC; Provisional	96.49
PRK05866	293	short chain dehydrogenase; Provisional	96.47
PRK06196	315	oxidoreductase; Provisional	96.43
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	96.42
PRK12367	245	short chain dehydrogenase; Provisional	96.41
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.39
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.38
PRK04148	134	hypothetical protein; Provisional	96.38
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.38
PRK07831	262	short chain dehydrogenase; Provisional	96.33
PLN02244	340	tocopherol O-methyltransferase	96.3
PRK05854	313	short chain dehydrogenase; Provisional	96.3
PRK07806	248	short chain dehydrogenase; Provisional	96.3
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	96.28
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.26
PRK07814	263	short chain dehydrogenase; Provisional	96.24
PRK06180	277	short chain dehydrogenase; Provisional	96.23
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.23
PRK05867	253	short chain dehydrogenase; Provisional	96.22
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.22
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.22
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	96.21
PLN03139	386	formate dehydrogenase; Provisional	96.19
PRK08339	263	short chain dehydrogenase; Provisional	96.19
COG2910	211	Putative NADH-flavin reductase [General function p	96.19
PLN03075	296	nicotianamine synthase; Provisional	96.19
PRK12829	264	short chain dehydrogenase; Provisional	96.19
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.17
PRK07832	272	short chain dehydrogenase; Provisional	96.17
PRK07062	265	short chain dehydrogenase; Provisional	96.17
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	96.16
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.15
PRK07904	253	short chain dehydrogenase; Provisional	96.13
PRK09291	257	short chain dehydrogenase; Provisional	96.11
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.09
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	96.09
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.08
PRK07326	237	short chain dehydrogenase; Provisional	96.08
PRK06841	255	short chain dehydrogenase; Provisional	96.08
PRK07677	252	short chain dehydrogenase; Provisional	96.07
PRK07574	385	formate dehydrogenase; Provisional	96.06
PRK08017	256	oxidoreductase; Provisional	96.05
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.04
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.04
PLN02233	261	ubiquinone biosynthesis methyltransferase	96.03
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	96.02
PRK07478	254	short chain dehydrogenase; Provisional	96.02
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.01
PRK07109	334	short chain dehydrogenase; Provisional	96.0
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.0
PRK08265	261	short chain dehydrogenase; Provisional	95.99
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	95.98
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.97
PRK06500	249	short chain dehydrogenase; Provisional	95.95
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.92
PRK06194	287	hypothetical protein; Provisional	95.91
PRK07063	260	short chain dehydrogenase; Provisional	95.91
PRK07024	257	short chain dehydrogenase; Provisional	95.89
PRK09072	263	short chain dehydrogenase; Provisional	95.88
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.87
PRK08862	227	short chain dehydrogenase; Provisional	95.87
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.84
PRK07454	241	short chain dehydrogenase; Provisional	95.84
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.83
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.82
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	95.82
PRK07774	250	short chain dehydrogenase; Provisional	95.81
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.81
PRK07576	264	short chain dehydrogenase; Provisional	95.8
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.8
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.8
PRK06197	306	short chain dehydrogenase; Provisional	95.79
PRK12939	250	short chain dehydrogenase; Provisional	95.79
PRK08589	272	short chain dehydrogenase; Validated	95.75
PRK05717	255	oxidoreductase; Validated	95.75
PRK08628	258	short chain dehydrogenase; Provisional	95.75
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	95.74
PRK08643	256	acetoin reductase; Validated	95.71
PRK06125	259	short chain dehydrogenase; Provisional	95.7
PRK05876	275	short chain dehydrogenase; Provisional	95.7
PRK06179	270	short chain dehydrogenase; Provisional	95.7
PRK08251	248	short chain dehydrogenase; Provisional	95.7
PRK12828	239	short chain dehydrogenase; Provisional	95.7
PRK07035	252	short chain dehydrogenase; Provisional	95.69
PRK06483	236	dihydromonapterin reductase; Provisional	95.68
PRK04266	226	fibrillarin; Provisional	95.68
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.67
PRK07890	258	short chain dehydrogenase; Provisional	95.66
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.65
PRK08267	260	short chain dehydrogenase; Provisional	95.64
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	95.63
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	95.61
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.61
PRK08263	275	short chain dehydrogenase; Provisional	95.6
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.59
PRK10538	248	malonic semialdehyde reductase; Provisional	95.59
PLN02490	340	MPBQ/MSBQ methyltransferase	95.59
PLN02253	280	xanthoxin dehydrogenase	95.59
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.58
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.58
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	95.58
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.58
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.57
PRK05884	223	short chain dehydrogenase; Provisional	95.56
COG4122	219	Predicted O-methyltransferase [General function pr	95.56
PRK08264	238	short chain dehydrogenase; Validated	95.56
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	95.55
PRK06172	253	short chain dehydrogenase; Provisional	95.54
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.52
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.52
PRK05875	276	short chain dehydrogenase; Provisional	95.52
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.5
PLN00203	519	glutamyl-tRNA reductase	95.5
PRK06720	169	hypothetical protein; Provisional	95.49
PRK12937	245	short chain dehydrogenase; Provisional	95.46
PRK09242	257	tropinone reductase; Provisional	95.45
PRK07067	257	sorbitol dehydrogenase; Provisional	95.45
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.45
PRK06914	280	short chain dehydrogenase; Provisional	95.44
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	95.44
PRK06482	276	short chain dehydrogenase; Provisional	95.43
PRK06181	263	short chain dehydrogenase; Provisional	95.43
PRK06101	240	short chain dehydrogenase; Provisional	95.42
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.41
PRK06114	254	short chain dehydrogenase; Provisional	95.4
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	95.39
PRK07856	252	short chain dehydrogenase; Provisional	95.39
PRK08226	263	short chain dehydrogenase; Provisional	95.37
PRK13243	333	glyoxylate reductase; Reviewed	95.36
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.35
PRK13403	335	ketol-acid reductoisomerase; Provisional	95.32
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.31
PRK06138	252	short chain dehydrogenase; Provisional	95.3
PRK07074	257	short chain dehydrogenase; Provisional	95.3
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	95.3
PRK06484	520	short chain dehydrogenase; Validated	95.3
PRK11207	197	tellurite resistance protein TehB; Provisional	95.28
PLN02928	347	oxidoreductase family protein	95.28
PRK06398	258	aldose dehydrogenase; Validated	95.25
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.23
KOG0725	270	consensus Reductases with broad range of substrate	95.22
PRK07102	243	short chain dehydrogenase; Provisional	95.21
PRK06953	222	short chain dehydrogenase; Provisional	95.21
TIGR01934	223	MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis	95.2
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.19
PRK07402	196	precorrin-6B methylase; Provisional	95.19
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	95.19
TIGR00438	188	rrmJ cell division protein FtsJ.	95.19
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	95.18
PRK06198	260	short chain dehydrogenase; Provisional	95.16
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.16
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.15
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	95.15
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.14
PRK08303	305	short chain dehydrogenase; Provisional	95.14
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.13
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.11
PRK07985	294	oxidoreductase; Provisional	95.1
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.1
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	95.1
PRK07791	286	short chain dehydrogenase; Provisional	95.09
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.09
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	95.07
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	95.06
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.05
TIGR00452	314	methyltransferase, putative. Known examples to dat	95.04
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.0
PRK06484	520	short chain dehydrogenase; Validated	95.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	94.98
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	94.98
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	94.98
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	94.98
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	94.96
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	94.96
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	94.94
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	94.93
PLN02780	320	ketoreductase/ oxidoreductase	94.93
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	94.93
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	94.91
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	94.88
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	94.87
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	94.87
PRK05650	270	short chain dehydrogenase; Provisional	94.85
PRK07775	274	short chain dehydrogenase; Provisional	94.83
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	94.81
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	94.79
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	94.79
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.79
PLN02427	386	UDP-apiose/xylose synthase	94.77
PLN02396	322	hexaprenyldihydroxybenzoate methyltransferase	94.76
PRK08618	325	ornithine cyclodeaminase; Validated	94.76
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	94.73
PRK06523	260	short chain dehydrogenase; Provisional	94.73
PLN02336	475	phosphoethanolamine N-methyltransferase	94.71
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	94.7
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	94.69
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	94.69
PRK12743	256	oxidoreductase; Provisional	94.68
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	94.63
PRK08219	227	short chain dehydrogenase; Provisional	94.62
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	94.59
PLN02896	353	cinnamyl-alcohol dehydrogenase	94.58
PRK13256	226	thiopurine S-methyltransferase; Reviewed	94.57
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	94.55
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	94.54
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	94.52
PRK06128	300	oxidoreductase; Provisional	94.51
PRK07340	304	ornithine cyclodeaminase; Validated	94.51
PRK13255	218	thiopurine S-methyltransferase; Reviewed	94.48
KOG1208	314	consensus Dehydrogenases with different specificit	94.47
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	94.46
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	94.42
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	94.4
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	94.4
PRK12480	330	D-lactate dehydrogenase; Provisional	94.37
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	94.35
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.35
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	94.35
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.32
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.31
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	94.31
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	94.31
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.31
PRK08703	239	short chain dehydrogenase; Provisional	94.31
PRK05599	246	hypothetical protein; Provisional	94.3
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	94.3
PRK05855	582	short chain dehydrogenase; Validated	94.28
PRK00811	283	spermidine synthase; Provisional	94.26
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	94.2
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	94.2
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	94.18
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	94.16
PF13847	152	Methyltransf_31: Methyltransferase domain; PDB: 3T	94.15
PRK08278	273	short chain dehydrogenase; Provisional	94.13
PRK09186	256	flagellin modification protein A; Provisional	94.13
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	94.12
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.08
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	94.07
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.98
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	93.98
KOG1252	362	consensus Cystathionine beta-synthase and related	93.98
PRK07577	234	short chain dehydrogenase; Provisional	93.93
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	93.91
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	93.9
PRK01581	374	speE spermidine synthase; Validated	93.86
PRK07201	657	short chain dehydrogenase; Provisional	93.83
PRK14904	445	16S rRNA methyltransferase B; Provisional	93.81
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	93.8
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	93.78
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	93.77
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	93.76
PF00044	151	Gp_dh_N: Glyceraldehyde 3-phosphate dehydrogenase,	93.75
PRK09135	249	pteridine reductase; Provisional	93.7
PLN00016	378	RNA-binding protein; Provisional	93.69
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	93.68
PRK08936	261	glucose-1-dehydrogenase; Provisional	93.66
PRK06701	290	short chain dehydrogenase; Provisional	93.64
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	93.59
PRK14982	340	acyl-ACP reductase; Provisional	93.59
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	93.59
PRK15068	322	tRNA mo(5)U34 methyltransferase; Provisional	93.58
PLN02366	308	spermidine synthase	93.56
PLN02166	436	dTDP-glucose 4,6-dehydratase	93.55
PRK14901	434	16S rRNA methyltransferase B; Provisional	93.51
PRK12938	246	acetyacetyl-CoA reductase; Provisional	93.48
PRK14903	431	16S rRNA methyltransferase B; Provisional	93.48
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.46
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	93.46
PLN02206	442	UDP-glucuronate decarboxylase	93.46
PRK15451	247	tRNA cmo(5)U34 methyltransferase; Provisional	93.44
PRK04457	262	spermidine synthase; Provisional	93.44
PRK12548	289	shikimate 5-dehydrogenase; Provisional	93.44
PRK09134	258	short chain dehydrogenase; Provisional	93.44
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.44
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.43
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.39
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	93.37
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	93.37
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.35
PRK06436	303	glycerate dehydrogenase; Provisional	93.34
PRK06141	314	ornithine cyclodeaminase; Validated	93.33
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	93.32
PLN02695	370	GDP-D-mannose-3',5'-epimerase	93.32
COG2521	287	Predicted archaeal methyltransferase [General func	93.29
PRK08655	437	prephenate dehydrogenase; Provisional	93.28
PLN02214	342	cinnamoyl-CoA reductase	93.27
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.24
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.22
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.19
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	93.19
PRK07417	279	arogenate dehydrogenase; Reviewed	93.15
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	93.13
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	93.12
PLN00198	338	anthocyanidin reductase; Provisional	93.12
PRK11088	272	rrmA 23S rRNA methyltransferase A; Provisional	93.12
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	93.09
PLN02686	367	cinnamoyl-CoA reductase	93.09
KOG1270	282	consensus Methyltransferases [Coenzyme transport a	93.08
PRK00536	262	speE spermidine synthase; Provisional	93.06
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	93.04
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	93.02
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	92.99
PRK07023	243	short chain dehydrogenase; Provisional	92.94
PRK03612	521	spermidine synthase; Provisional	92.93
PRK10901	427	16S rRNA methyltransferase B; Provisional	92.88
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.87
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.85
KOG1540	296	consensus Ubiquinone biosynthesis methyltransferas	92.83
PRK08309	177	short chain dehydrogenase; Provisional	92.79

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=6.3e-51  Score=349.92  Aligned_cols=275  Identities=35%  Similarity=0.492  Sum_probs=240.2

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++++   +++. +.+.|+|+++||+|+|+|+|+|++|+|.++|.++..  .+|.++|||.+|+|+++|++|+
T Consensus         4 mkA~~~~~~~~p---l~i~-e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~--~~P~ipGHEivG~V~~vG~~V~   77 (339)
T COG1064           4 MKAAVLKKFGQP---LEIE-EVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP--KLPLIPGHEIVGTVVEVGEGVT   77 (339)
T ss_pred             eEEEEEccCCCC---ceEE-eccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCC--CCCccCCcceEEEEEEecCCCc
Confidence            899999999998   8999 899999999999999999999999999999998644  3899999999999999999999


Q ss_pred             CCCCCCEEEE-ec------------------CccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           81 KFKVGDEVYG-DI------------------NEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        81 ~~~~Gd~V~~-~~------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      .|++||||.. +.                  .+....+...+|+|+||+++|+.+++++|++++++++|.+.|++.|+|+
T Consensus        78 ~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~  157 (339)
T COG1064          78 GLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYR  157 (339)
T ss_pred             cCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEee
Confidence            9999999966 21                  1112244567899999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCc-ccccCCCcccEEEe
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE-NIEDLPEKFDVVFD  220 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~d~vid  220 (284)
                      +++..+++||++|+|+| .|++|++++|+|+++ +++|++++++++|++.++++|++++++.++. ..+...+.+|++||
T Consensus       158 alk~~~~~pG~~V~I~G-~GGlGh~avQ~Aka~-ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~  235 (339)
T COG1064         158 ALKKANVKPGKWVAVVG-AGGLGHMAVQYAKAM-GAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIID  235 (339)
T ss_pred             ehhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEE
Confidence            99999999999999999 789999999999997 8999999999999999999999999997633 33334445999999


Q ss_pred             CCCC--cHHHHHhhccCCEEEEEcCCC-CC-Cce------------eEEEeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          221 AVGQ--CDKALKAVKEGGRVVSIIGSV-TP-PAS------------SFVLTSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       221 ~~g~--~~~~~~~l~~~G~~v~~g~~~-~~-~~~------------~~~~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +++.  ++.+++.|+++|+++++|.+. .+ ..+            .-+....+.++++++++.++|+++|.|.+++||
T Consensus       236 tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i~e~~~l  314 (339)
T COG1064         236 TVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEILETIPL  314 (339)
T ss_pred             CCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeEEeeECH
Confidence            9994  489999999999999999884 22 111            112334689999999999999999999767664

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=7.6e-46  Score=324.82  Aligned_cols=273  Identities=44%  Similarity=0.614  Sum_probs=236.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++..++.+ ..++++ +.|.|+|++|||+|||.++++|+.|...++|.. ....++|+++|.|++|+|+++|++++
T Consensus         1 mka~~~~~~g~~-~~l~~~-e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~-~~~~~~P~i~G~d~aG~V~avG~~V~   77 (326)
T COG0604           1 MKAVVVEEFGGP-EVLKVV-EVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA-PPVRPLPFIPGSEAAGVVVAVGSGVT   77 (326)
T ss_pred             CeEEEEeccCCC-ceeEEE-ecCCCCCCCCeEEEEEEEeecChHHHHhccCCC-CCCCCCCCcccceeEEEEEEeCCCCC
Confidence            999999999998 558999 899999999999999999999999999999862 22346899999999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~ga  159 (284)
                      .|++||||+....      ...+|+|+||.++|++.++++|++++++++|+++++++|||+++. ..++++|++|||+||
T Consensus        78 ~~~~GdrV~~~~~------~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~ga  151 (326)
T COG0604          78 GFKVGDRVAALGG------VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGA  151 (326)
T ss_pred             CcCCCCEEEEccC------CCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence            9999999999741      004799999999999999999999999999999999999999994 688999999999999


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC--cHHHHHh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKA  231 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~--~~~~~~~  231 (284)
                      +|++|.+++|+|+++ |+++++++.++++.++++++|+++++++.++++.+.      ++++|+|||++|.  +..++.+
T Consensus       152 aGgVG~~aiQlAk~~-G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~  230 (326)
T COG0604         152 AGGVGSAAIQLAKAL-GATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAA  230 (326)
T ss_pred             CchHHHHHHHHHHHc-CCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHH
Confidence            999999999999996 778888888888888999999999999887665543      3479999999996  5789999


Q ss_pred             hccCCEEEEEcCCCC-CC-cee----------E---EEecc-----HHHHHHHHHHHHCCCeeEeecccccC
Q 023273          232 VKEGGRVVSIIGSVT-PP-ASS----------F---VLTSD-----GSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       232 l~~~G~~v~~g~~~~-~~-~~~----------~---~~~~~-----~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      |+++|+++.+|..+. +. .++          .   .....     .+.++++.+++++|.+++.|+++|||
T Consensus       231 l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l  302 (326)
T COG0604         231 LAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYPL  302 (326)
T ss_pred             hccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccEech
Confidence            999999999987652 11 111          0   11122     57888999999999999999999997

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.9e-44  Score=301.57  Aligned_cols=276  Identities=25%  Similarity=0.347  Sum_probs=230.2

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCC-CCCCCCCCCcccccceeEEEEEeCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGA-FSATDSPLPTIPGYDVAGVVEKVGSQ   78 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~-~~~~~~~~p~~~G~e~~G~V~~vG~~   78 (284)
                      |+|+++..+++.    +++ +.|.|++ .|+||+|++.++|||+||+|++... ...+..+.|+++|||.+|+|+++|++
T Consensus         5 ~~A~vl~g~~di----~i~-~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~   79 (354)
T KOG0024|consen    5 NLALVLRGKGDI----RIE-QRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDE   79 (354)
T ss_pred             cceeEEEccCce----eEe-eCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccc
Confidence            789999999985    998 8898887 9999999999999999999998654 33334578999999999999999999


Q ss_pred             CCCCCCCCEEEEecCc-----------ccc--------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHH
Q 023273           79 VKKFKVGDEVYGDINE-----------KAL--------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETA  139 (284)
Q Consensus        79 ~~~~~~Gd~V~~~~~~-----------~~~--------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta  139 (284)
                      |+++++||||+..++.           .++        ..+..+|++++|++.+++.|+++|++++++++|++- +++++
T Consensus        80 Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLsV~  158 (354)
T KOG0024|consen   80 VKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLSVG  158 (354)
T ss_pred             ccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc-chhhh
Confidence            9999999999776531           111        224467999999999999999999999999988873 36679


Q ss_pred             HHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc-cccC-------
Q 023273          140 YEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IEDL-------  211 (284)
Q Consensus       140 ~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~-------  211 (284)
                      +||.+++++++|++|||.| +|++|+.+...|++++..+|++++..++|++.++++|++.+.+..... .+.+       
T Consensus       159 ~HAcr~~~vk~Gs~vLV~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~  237 (354)
T KOG0024|consen  159 VHACRRAGVKKGSKVLVLG-AGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKA  237 (354)
T ss_pred             hhhhhhcCcccCCeEEEEC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhh
Confidence            9999999999999999999 899999999999998557899999999999999999999887765433 1111       


Q ss_pred             --CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee------------EEEeccHHHHHHHHHHHHCCCe-
Q 023273          212 --PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS------------FVLTSDGSILEKLNPYFESGKV-  273 (284)
Q Consensus       212 --~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~g~i-  273 (284)
                        ...+|+.|||+|.   .+.++.+++.+|++++.+.-.....++            -.++....++..+++++++|++ 
T Consensus       238 ~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGki~  317 (354)
T KOG0024|consen  238 LGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGKID  317 (354)
T ss_pred             ccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCCcC
Confidence              2359999999994   599999999999988887544322222            2344456799999999999986 


Q ss_pred             -eEeecccccC
Q 023273          274 -KAIIDPKGLL  283 (284)
Q Consensus       274 -~~~i~~~~~~  283 (284)
                       +++|+++|+|
T Consensus       318 ~k~lIT~r~~~  328 (354)
T KOG0024|consen  318 VKPLITHRYKF  328 (354)
T ss_pred             chhheeccccc
Confidence             6789999985

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=1.1e-42  Score=293.44  Aligned_cols=275  Identities=27%  Similarity=0.348  Sum_probs=233.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      +|++++.++++|   ++++ +..+.+|++|||+||+.++|+|++|.+..+|..|   ..+|.++|||++|+|++||++|+
T Consensus         3 ~~aAV~~~~~~P---l~i~-ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p---~~~P~vLGHEgAGiVe~VG~gVt   75 (366)
T COG1062           3 TRAAVAREAGKP---LEIE-EVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDP---EGFPAVLGHEGAGIVEAVGEGVT   75 (366)
T ss_pred             ceEeeeecCCCC---eEEE-EEecCCCCCCeEEEEEEEeeccccchhhhcCCCC---CCCceecccccccEEEEecCCcc
Confidence            579999999999   9999 8999999999999999999999999999999875   34899999999999999999999


Q ss_pred             CCCCCCEEEEecC-cc-------------------------------cc-------CCCCCCCceeeEEeeecCceeeCC
Q 023273           81 KFKVGDEVYGDIN-EK-------------------------------AL-------DHPKRNGSLAEYTAVEENLLALKP  121 (284)
Q Consensus        81 ~~~~Gd~V~~~~~-~~-------------------------------~~-------~~~~~~g~~~~~~~~~~~~~~~ip  121 (284)
                      +++|||+|+..+. ++                               +.       +..-..++|++|.+++..++++++
T Consensus        76 ~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~  155 (366)
T COG1062          76 SVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKID  155 (366)
T ss_pred             ccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECC
Confidence            9999999976541 00                               00       011122599999999999999999


Q ss_pred             CCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE
Q 023273          122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA  200 (284)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~  200 (284)
                      ++.+++.++.+.|...|++.++ ..+++++|++|.|.| .|++|+++++-|+..+..++|+++.+++|+++++++|++++
T Consensus       156 ~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~  234 (366)
T COG1062         156 PDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHF  234 (366)
T ss_pred             CCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCcee
Confidence            9999999999999999999987 789999999999999 99999999999999755689999999999999999999999


Q ss_pred             eeCCCc-cccc----C-CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCC-----CceeEEE---------ec-
Q 023273          201 IDYTKE-NIED----L-PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP-----PASSFVL---------TS-  256 (284)
Q Consensus       201 ~~~~~~-~~~~----~-~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~---------~~-  256 (284)
                      +|..+. ++.+    + ..|+|.+|||+|+   .++++++..++|+.+++|.+...     +.+.++.         ++ 
T Consensus       235 vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~  314 (366)
T COG1062         235 VNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGA  314 (366)
T ss_pred             ecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeecCC
Confidence            998765 2322    2 4599999999997   58999999999999999987532     2222211         11 


Q ss_pred             -cHHHHHHHHHHHHCCCe--eEeecccccC
Q 023273          257 -DGSILEKLNPYFESGKV--KAIIDPKGLL  283 (284)
Q Consensus       257 -~~~~~~~~~~~~~~g~i--~~~i~~~~~~  283 (284)
                       -+.+++.+++++.+|+|  +++|++++||
T Consensus       315 ~p~~diP~lv~~y~~Gkl~~d~lvt~~~~L  344 (366)
T COG1062         315 RPRSDIPRLVDLYMAGKLPLDRLVTHTIPL  344 (366)
T ss_pred             ccccchhHHHHHHHcCCCchhHHhhccccH
Confidence             25689999999999987  5579999986

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.9e-42  Score=285.91  Aligned_cols=270  Identities=27%  Similarity=0.389  Sum_probs=218.9

Q ss_pred             eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (284)
Q Consensus         2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   81 (284)
                      +++.+..++.. ..+++. +++.|+|+++||+|+|+|+|||++|+|.+.|.++.  .++|.++|||.+|+|+++|+++++
T Consensus        11 ~g~~~~~~~G~-l~p~~~-~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~--s~~PlV~GHEiaG~VvkvGs~V~~   86 (360)
T KOG0023|consen   11 FGWAARDPSGV-LSPEVF-SFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL--SKYPLVPGHEIAGVVVKVGSNVTG   86 (360)
T ss_pred             EEEEEECCCCC-CCccee-EcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc--ccCCccCCceeeEEEEEECCCccc
Confidence            46778877775 336778 78999999999999999999999999999999864  689999999999999999999999


Q ss_pred             CCCCCEEEEe-----c--------------C-------ccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccch
Q 023273           82 FKVGDEVYGD-----I--------------N-------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA  135 (284)
Q Consensus        82 ~~~Gd~V~~~-----~--------------~-------~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~  135 (284)
                      |++||||-.=     |              +       ....++....|+|++|+++++.++++||++++++.||.+.|+
T Consensus        87 ~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCa  166 (360)
T KOG0023|consen   87 FKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCA  166 (360)
T ss_pred             ccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhc
Confidence            9999998111     1              1       011122334566999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh-hhHHHHHHcCCcEEeeCC-Ccc-cccC-
Q 023273          136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLAIDYT-KEN-IEDL-  211 (284)
Q Consensus       136 ~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~~~~~~~g~~~~~~~~-~~~-~~~~-  211 (284)
                      ..|.|.++...++.||+++-|.|+ |++|.+++++|+++ |.+|+++++++ +|.+.++.+|++..++.. +.+ .... 
T Consensus       167 GITvYspLk~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAM-G~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~  244 (360)
T KOG0023|consen  167 GITVYSPLKRSGLGPGKWVGIVGL-GGLGHMAVQYAKAM-GMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIM  244 (360)
T ss_pred             ceEEeehhHHcCCCCCcEEEEecC-cccchHHHHHHHHh-CcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHH
Confidence            999999999999999999999995 55999999999997 99999999987 566777889999988876 333 2222 


Q ss_pred             ---CCcccEEEeCCC-CcHHHHHhhccCCEEEEEcCCCCCCcee---E---------EEeccHHHHHHHHHHHHCCCeeE
Q 023273          212 ---PEKFDVVFDAVG-QCDKALKAVKEGGRVVSIIGSVTPPASS---F---------VLTSDGSILEKLNPYFESGKVKA  275 (284)
Q Consensus       212 ---~~~~d~vid~~g-~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~---------~~~~~~~~~~~~~~~~~~g~i~~  275 (284)
                         ..++|.+.+.+- .++.++++|+.+|++|++|.+..+..++   +         +....+.+.++++++.++|.+++
T Consensus       245 ~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~~~ik~  324 (360)
T KOG0023|consen  245 KTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVARGLIKS  324 (360)
T ss_pred             HhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHcCCCcC
Confidence               334555544422 3689999999999999999987543332   1         11236789999999999999888


Q ss_pred             ee
Q 023273          276 II  277 (284)
Q Consensus       276 ~i  277 (284)
                      .|
T Consensus       325 ~I  326 (360)
T KOG0023|consen  325 PI  326 (360)
T ss_pred             ce
Confidence            76

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=8.1e-42  Score=275.95  Aligned_cols=268  Identities=36%  Similarity=0.461  Sum_probs=236.6

Q ss_pred             eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (284)
Q Consensus         2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   81 (284)
                      |.+++.+.|.. +.++++ +.|.|+|.|+|++|+-.|+|+|..|..+++|.+.  +.+.|.++|-|++|+|+++|+++++
T Consensus        10 k~i~v~e~Ggy-dvlk~e-d~pv~~papgel~iknka~GlNfid~y~RkGlY~--~~plPytpGmEaaGvVvAvG~gvtd   85 (336)
T KOG1197|consen   10 KCIVVTEFGGY-DVLKLE-DRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD--PAPLPYTPGMEAAGVVVAVGEGVTD   85 (336)
T ss_pred             eEEEEeccCCc-ceEEEe-eecCCCCCCCceEEeehhcCccHHHHHHhccccC--CCCCCcCCCcccceEEEEecCCccc
Confidence            67889999998 889999 8999999999999999999999999999999872  5678999999999999999999999


Q ss_pred             CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 023273           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA  160 (284)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~  160 (284)
                      +++||||+-..+         .|.|+++..+|...+.++|+.+++..+|++.+.++|||.-+ +..++++|++||++.|+
T Consensus        86 rkvGDrVayl~~---------~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAA  156 (336)
T KOG1197|consen   86 RKVGDRVAYLNP---------FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAA  156 (336)
T ss_pred             cccccEEEEecc---------chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEecc
Confidence            999999987653         89999999999999999999999999999999999999988 56899999999999999


Q ss_pred             chHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC--cHHHHHhh
Q 023273          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKAV  232 (284)
Q Consensus       161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~--~~~~~~~l  232 (284)
                      |++|++++|+++.. +.++|.+.+..+|.+.+++.|+++.|+++.+++-+.      ++|+|+++|.+|.  +...+.+|
T Consensus       157 GGVGlll~Ql~ra~-~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~L  235 (336)
T KOG1197|consen  157 GGVGLLLCQLLRAV-GAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAAL  235 (336)
T ss_pred             ccHHHHHHHHHHhc-CcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHHh
Confidence            99999999999995 999999999999999999999999999987775543      6799999999994  68999999


Q ss_pred             ccCCEEEEEcCCCC---CC--------ceeEEE----e--ccH----HHHHHHHHHHHCCCeeEeecccccC
Q 023273          233 KEGGRVVSIIGSVT---PP--------ASSFVL----T--SDG----SILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       233 ~~~G~~v~~g~~~~---~~--------~~~~~~----~--~~~----~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      ++.|++|.+|..+.   +.        ++.++.    +  ..+    .-..+++.++-+|.|++.|+|+|||
T Consensus       236 k~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypl  307 (336)
T KOG1197|consen  236 KPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPL  307 (336)
T ss_pred             ccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecch
Confidence            99999999987652   11        111111    0  011    2356778888999999999999997

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=1.3e-39  Score=288.75  Aligned_cols=275  Identities=29%  Similarity=0.393  Sum_probs=226.1

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..++.    ++++ +.+.|+|+++||+|++.++++|++|++.+.+.++. +..+|.++|||++|+|+++|++++
T Consensus         1 mka~~~~~~~~----l~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~   74 (339)
T cd08239           1 MRGAVFPGDRT----VELR-EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA-PAYQGVIPGHEPAGVVVAVGPGVT   74 (339)
T ss_pred             CeEEEEecCCc----eEEE-ecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc-cCCCCceeccCceEEEEEECCCCc
Confidence            99999997654    6998 88999999999999999999999999988775422 223578999999999999999999


Q ss_pred             CCCCCCEEEEecCccc-------------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           81 KFKVGDEVYGDINEKA-------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~-------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      +|++||+|++.+....                   ..+...+|+|++|+++|.+.++++|+++++++++++++++.|||+
T Consensus        75 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  154 (339)
T cd08239          75 HFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYH  154 (339)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence            9999999987642100                   012234799999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccccc---C--CCcc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED---L--PEKF  215 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~--~~~~  215 (284)
                      ++...++++|++|+|+| +|++|++++++|+.+ |++ |++++++++|.+.++++|++.+++++..+...   .  .+++
T Consensus       155 ~l~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~-G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~  232 (339)
T cd08239         155 ALRRVGVSGRDTVLVVG-AGPVGLGALMLARAL-GAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGA  232 (339)
T ss_pred             HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCCCC
Confidence            99888899999999998 699999999999996 888 99999999999999999999888876543111   1  3479


Q ss_pred             cEEEeCCCCc---HHHHHhhccCCEEEEEcCCCCCC-c---------eeE--EEeccHHHHHHHHHHHHCCCee--Eeec
Q 023273          216 DVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTPP-A---------SSF--VLTSDGSILEKLNPYFESGKVK--AIID  278 (284)
Q Consensus       216 d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~~~-~---------~~~--~~~~~~~~~~~~~~~~~~g~i~--~~i~  278 (284)
                      |++||++|+.   ..++++|+++|+++.+|...... .         ..+  ......++++++++++++|.++  +.|+
T Consensus       233 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~  312 (339)
T cd08239         233 DVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLVT  312 (339)
T ss_pred             CEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeEE
Confidence            9999999963   67899999999999998654211 0         111  1122457899999999999986  4799


Q ss_pred             ccccC
Q 023273          279 PKGLL  283 (284)
Q Consensus       279 ~~~~~  283 (284)
                      ++|||
T Consensus       313 ~~~~l  317 (339)
T cd08239         313 HRFGL  317 (339)
T ss_pred             EEecH
Confidence            99886

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=1.1e-39  Score=292.75  Aligned_cols=277  Identities=26%  Similarity=0.331  Sum_probs=226.3

Q ss_pred             CeEEEEcccCCC-----ccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEe
Q 023273            1 MKAWVYKEYGNS-----QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKV   75 (284)
Q Consensus         1 m~a~~~~~~g~~-----~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~v   75 (284)
                      |||+++.++|.+     .+.++++ +.+.|+|+++||+|||.+++||++|++.+.|.++   ..+|.++|||++|+|+++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~-~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~---~~~p~i~GhE~~G~V~~v   76 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIE-EVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP---RPLPMALGHEAAGVVVEV   76 (371)
T ss_pred             CcceEEEecccccccccCCCceEE-EeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC---CCCCccCCccceeEEEEe
Confidence            999999998853     2558998 8899999999999999999999999999988653   346889999999999999


Q ss_pred             CCCCCCCCCCCEEEEecCc----cc---cC--------------C------------------CCCCCceeeEEeeecCc
Q 023273           76 GSQVKKFKVGDEVYGDINE----KA---LD--------------H------------------PKRNGSLAEYTAVEENL  116 (284)
Q Consensus        76 G~~~~~~~~Gd~V~~~~~~----~~---~~--------------~------------------~~~~g~~~~~~~~~~~~  116 (284)
                      |++++++++||||++.+..    +.   ..              +                  ....|+|++|+++|.+.
T Consensus        77 G~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~  156 (371)
T cd08281          77 GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRS  156 (371)
T ss_pred             CCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccc
Confidence            9999999999999874210    00   00              0                  00137999999999999


Q ss_pred             eeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHH
Q 023273          117 LALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS  194 (284)
Q Consensus       117 ~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~  194 (284)
                      ++++|+++++++++++++++.|||+++ ...++++|++|+|.| +|++|++++++|+.+ |+ +|++++.+++|++.+++
T Consensus       157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G-~G~vG~~a~~lak~~-G~~~Vi~~~~~~~r~~~a~~  234 (371)
T cd08281         157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVAA-GASQVVAVDLNEDKLALARE  234 (371)
T ss_pred             eEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEEcCCHHHHHHHHH
Confidence            999999999999999999999999987 568899999999998 699999999999996 87 68999999999999999


Q ss_pred             cCCcEEeeCCCccccc----C-CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCce------------eE--
Q 023273          195 LGADLAIDYTKENIED----L-PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS------------SF--  252 (284)
Q Consensus       195 ~g~~~~~~~~~~~~~~----~-~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~------------~~--  252 (284)
                      +|+++++++..+++.+    . .+++|++|||+|+   ...++++++++|+++.+|.......+            .+  
T Consensus       235 ~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g  314 (371)
T cd08281         235 LGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKG  314 (371)
T ss_pred             cCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEE
Confidence            9999998876544222    1 3479999999985   47889999999999999875321111            11  


Q ss_pred             EEec---cHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273          253 VLTS---DGSILEKLNPYFESGKVKA--IIDPKGLL  283 (284)
Q Consensus       253 ~~~~---~~~~~~~~~~~~~~g~i~~--~i~~~~~~  283 (284)
                      ....   ..++++++++++++|++++  +|+++|||
T Consensus       315 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l  350 (371)
T cd08281         315 SYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPL  350 (371)
T ss_pred             EecCCCChHHHHHHHHHHHHcCCCCchhheeeeecH
Confidence            1111   2468899999999999965  68999986

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=2.7e-39  Score=288.80  Aligned_cols=274  Identities=23%  Similarity=0.278  Sum_probs=225.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++.+++.+   ++++ +.|.|+|+++||+|||.++++|++|++.+.|.++   ..+|.++|||++|+|+++|++++
T Consensus         2 mka~~~~~~~~~---~~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~---~~~p~i~G~e~~G~V~~vG~~v~   74 (358)
T TIGR03451         2 VRGVIARSKGAP---VELE-TIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN---DEFPFLLGHEAAGVVEAVGEGVT   74 (358)
T ss_pred             cEEEEEccCCCC---CEEE-EEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc---ccCCcccccceEEEEEEeCCCCc
Confidence            999999999987   7888 8999999999999999999999999999988653   24688999999999999999999


Q ss_pred             CCCCCCEEEEecCc----c---c----cC---------------CC-----CCCCceeeEEeeecCceeeCCCCCCHHhh
Q 023273           81 KFKVGDEVYGDINE----K---A----LD---------------HP-----KRNGSLAEYTAVEENLLALKPKNLSFVEA  129 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~----~---~----~~---------------~~-----~~~g~~~~~~~~~~~~~~~ip~~~~~~~a  129 (284)
                      +|++||+|++.+..    +   .    ..               +.     ...|+|++|+.+|.+.++++|++++++++
T Consensus        75 ~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~a  154 (358)
T TIGR03451        75 DVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAA  154 (358)
T ss_pred             ccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHh
Confidence            99999999874210    0   0    00               00     12589999999999999999999999999


Q ss_pred             hcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCcc
Q 023273          130 ASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKEN  207 (284)
Q Consensus       130 a~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~  207 (284)
                      +++++.+.|+|+++ +..++++|++|+|+| +|++|++++++|+.+ |++ |++++++++|.+.++++|++++++++..+
T Consensus       155 a~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~~~ak~~-G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~  232 (358)
T TIGR03451       155 GLLGCGVMAGLGAAVNTGGVKRGDSVAVIG-CGGVGDAAIAGAALA-GASKIIAVDIDDRKLEWAREFGATHTVNSSGTD  232 (358)
T ss_pred             hhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcC
Confidence            99998888999886 567899999999998 699999999999996 874 88899999999999999999888876544


Q ss_pred             ccc----C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC------------ceeEE--Eec---cHHHH
Q 023273          208 IED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP------------ASSFV--LTS---DGSIL  261 (284)
Q Consensus       208 ~~~----~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~------------~~~~~--~~~---~~~~~  261 (284)
                      +.+    .  +.++|++|||+|+   ...++++++++|+++.+|.+....            ...+.  +..   ..+++
T Consensus       233 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  312 (358)
T TIGR03451       233 PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDF  312 (358)
T ss_pred             HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHH
Confidence            322    1  3479999999995   478899999999999998754211            11111  111   25689


Q ss_pred             HHHHHHHHCCCeeE--eecccccC
Q 023273          262 EKLNPYFESGKVKA--IIDPKGLL  283 (284)
Q Consensus       262 ~~~~~~~~~g~i~~--~i~~~~~~  283 (284)
                      +++++++++|++++  .|+++|||
T Consensus       313 ~~~~~l~~~g~l~~~~~i~~~~~l  336 (358)
T TIGR03451       313 PMLVDLYLQGRLPLDAFVTERIGL  336 (358)
T ss_pred             HHHHHHHHcCCCCchheEEEEecH
Confidence            99999999999965  68999986

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.2e-40  Score=274.33  Aligned_cols=276  Identities=25%  Similarity=0.313  Sum_probs=232.9

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||++.+++++|   |.++ +...++|+.+||+|++.++++|++|.+.+.|..+  ...+|+++|||++|+|+.+|++|.
T Consensus         8 CKAAV~w~a~~P---L~IE-ei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~--~~~fP~IlGHEaaGIVESvGegV~   81 (375)
T KOG0022|consen    8 CKAAVAWEAGKP---LVIE-EIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDP--EGLFPVILGHEAAGIVESVGEGVT   81 (375)
T ss_pred             EeEeeeccCCCC---eeEE-EEEeCCCCCceEEEEEEEEeeccccceeecCCCc--cccCceEecccceeEEEEecCCcc
Confidence            689999999999   9999 8999999999999999999999999999999753  446899999999999999999999


Q ss_pred             CCCCCCEEEEecC----------------------------------------ccccCCCCCCCceeeEEeeecCceeeC
Q 023273           81 KFKVGDEVYGDIN----------------------------------------EKALDHPKRNGSLAEYTAVEENLLALK  120 (284)
Q Consensus        81 ~~~~Gd~V~~~~~----------------------------------------~~~~~~~~~~g~~~~~~~~~~~~~~~i  120 (284)
                      ++++||+|+....                                        +...+++....+|+||.+++...+++|
T Consensus        82 ~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kI  161 (375)
T KOG0022|consen   82 TVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKI  161 (375)
T ss_pred             ccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEec
Confidence            9999999976531                                        000112223359999999999999999


Q ss_pred             CCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE
Q 023273          121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL  199 (284)
Q Consensus       121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~  199 (284)
                      ++..+++.++.+.|...|+|.|. ..++++||+++.|.| .|++|+++++-|++.++.++|.++.+++|++.++++|+++
T Consensus       162 d~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe  240 (375)
T KOG0022|consen  162 DPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATE  240 (375)
T ss_pred             CCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcce
Confidence            99999999999999999999987 689999999999999 9999999999999975679999999999999999999999


Q ss_pred             EeeCCCcc--ccc-----CCCcccEEEeCCCCc---HHHHHhhccC-CEEEEEcCCCCCCceeE--------------EE
Q 023273          200 AIDYTKEN--IED-----LPEKFDVVFDAVGQC---DKALKAVKEG-GRVVSIIGSVTPPASSF--------------VL  254 (284)
Q Consensus       200 ~~~~~~~~--~~~-----~~~~~d~vid~~g~~---~~~~~~l~~~-G~~v~~g~~~~~~~~~~--------------~~  254 (284)
                      ++|..+..  ..+     ...|+|+-|||.|+.   ++++.+...+ |+-|.+|.......+.+              .+
T Consensus       241 ~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~F  320 (375)
T KOG0022|consen  241 FINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAF  320 (375)
T ss_pred             ecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEec
Confidence            99987211  111     267999999999974   6677777777 99999998764433321              11


Q ss_pred             e--ccHHHHHHHHHHHHCCCe--eEeecccccC
Q 023273          255 T--SDGSILEKLNPYFESGKV--KAIIDPKGLL  283 (284)
Q Consensus       255 ~--~~~~~~~~~~~~~~~g~i--~~~i~~~~~~  283 (284)
                      +  -..++++.+++.+.++++  +..|+|++||
T Consensus       321 GG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f  353 (375)
T KOG0022|consen  321 GGFKSKSDIPKLVKDYMKKKLNLDEFITHELPF  353 (375)
T ss_pred             ccccchhhhhHHHHHHHhCccchhhhhhcccCH
Confidence            1  146899999999999975  6679999997

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-39  Score=287.49  Aligned_cols=272  Identities=18%  Similarity=0.284  Sum_probs=216.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHc-CCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRML-GAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      ||++++.++++    ++++ +.+.| ++++||+|||.++|||++|++.+. |..+....++|.++|||++|+|+++  ++
T Consensus         5 ~~~~~~~~~~~----~~~~-~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v   76 (343)
T PRK09880          5 TQSCVVAGKKD----VAVT-EQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DS   76 (343)
T ss_pred             ceEEEEecCCc----eEEE-ecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cC
Confidence            68999998877    4888 78876 689999999999999999999875 4432223457899999999999999  77


Q ss_pred             CCCCCCCEEEEecCccc------------------cCC-----CCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchH
Q 023273           80 KKFKVGDEVYGDINEKA------------------LDH-----PKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT  136 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~------------------~~~-----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~  136 (284)
                      ++|++||||+..+....                  ..+     ...+|+|+||++++.+.++++|+++++++++ +..++
T Consensus        77 ~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~  155 (343)
T PRK09880         77 SGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPL  155 (343)
T ss_pred             ccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHH
Confidence            89999999986531100                  001     1246999999999999999999999987554 45567


Q ss_pred             HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC---C
Q 023273          137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL---P  212 (284)
Q Consensus       137 ~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~  212 (284)
                      .+||+++......+|++|+|.| +|++|++++++|+.+ |+ +|++++++++|++.++++|++.+++++.+++.+.   .
T Consensus       156 ~~a~~al~~~~~~~g~~VlV~G-~G~vG~~aiqlak~~-G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~  233 (343)
T PRK09880        156 AVAIHAAHQAGDLQGKRVFVSG-VGPIGCLIVAAVKTL-GAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEK  233 (343)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccC
Confidence            7899999777777899999998 699999999999996 77 6888999999999999999999998765443332   3


Q ss_pred             CcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee----------EEE-eccHHHHHHHHHHHHCCCeeE--e
Q 023273          213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS----------FVL-TSDGSILEKLNPYFESGKVKA--I  276 (284)
Q Consensus       213 ~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~----------~~~-~~~~~~~~~~~~~~~~g~i~~--~  276 (284)
                      +++|++||++|+   ...++++|+++|+++.+|.+.....++          +.. ....++++++++++++|++++  .
T Consensus       234 g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~  313 (343)
T PRK09880        234 GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLPL  313 (343)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCchhh
Confidence            369999999996   378999999999999998754322221          110 113467999999999999975  7


Q ss_pred             ecccccC
Q 023273          277 IDPKGLL  283 (284)
Q Consensus       277 i~~~~~~  283 (284)
                      |+++|||
T Consensus       314 i~~~~~l  320 (343)
T PRK09880        314 LSAEYPF  320 (343)
T ss_pred             eEEEEEH
Confidence            8999986

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=1.2e-38  Score=285.59  Aligned_cols=275  Identities=26%  Similarity=0.338  Sum_probs=224.0

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++..++..   ++++ +.|.|+|+++||+|+|.++++|++|++.+.|.++.  ..+|.++|||++|+|+++|++++
T Consensus         2 ~~a~~~~~~~~~---l~~~-~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~--~~~p~i~GhE~~G~V~~vG~~v~   75 (368)
T TIGR02818         2 SRAAVAWAAGQP---LKIE-EVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE--GVFPVILGHEGAGIVEAVGEGVT   75 (368)
T ss_pred             ceEEEEecCCCC---eEEE-EecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC--CCCCeeeccccEEEEEEECCCCc
Confidence            899999988866   7888 88999999999999999999999999999887542  35689999999999999999999


Q ss_pred             CCCCCCEEEEecCc----cc---cC--------------------------------CCCCCCceeeEEeeecCceeeCC
Q 023273           81 KFKVGDEVYGDINE----KA---LD--------------------------------HPKRNGSLAEYTAVEENLLALKP  121 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~----~~---~~--------------------------------~~~~~g~~~~~~~~~~~~~~~ip  121 (284)
                      +|++||||++.+..    +.   ..                                +....|+|++|+++|.+.++++|
T Consensus        76 ~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP  155 (368)
T TIGR02818        76 SVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKIN  155 (368)
T ss_pred             cCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECC
Confidence            99999999875311    00   00                                00014799999999999999999


Q ss_pred             CCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcE
Q 023273          122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL  199 (284)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~  199 (284)
                      +++++++++++++++.|||+++ +..++++|++|+|+| +|++|++++++|+.+ |+ +|++++.+++|++.++++|++.
T Consensus       156 ~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~iG~~a~q~Ak~~-G~~~Vi~~~~~~~~~~~a~~~Ga~~  233 (368)
T TIGR02818       156 PAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFG-LGGIGLSVIQGARMA-KASRIIAIDINPAKFELAKKLGATD  233 (368)
T ss_pred             CCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCe
Confidence            9999999999999999999998 578899999999998 699999999999996 87 7999999999999999999998


Q ss_pred             EeeCCC--ccccc----C-CCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCC--CCc---eeE--------E-E
Q 023273          200 AIDYTK--ENIED----L-PEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVT--PPA---SSF--------V-L  254 (284)
Q Consensus       200 ~~~~~~--~~~~~----~-~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~--~~~---~~~--------~-~  254 (284)
                      ++++.+  .++.+    . .+++|++||++|+   ...++++++++ |+++.+|.+..  +..   +.+        . .
T Consensus       234 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~  313 (368)
T TIGR02818       234 CVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAF  313 (368)
T ss_pred             EEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeec
Confidence            888653  11111    1 3489999999995   47889999886 99999986531  111   110        0 0


Q ss_pred             e--ccHHHHHHHHHHHHCCCee--EeecccccC
Q 023273          255 T--SDGSILEKLNPYFESGKVK--AIIDPKGLL  283 (284)
Q Consensus       255 ~--~~~~~~~~~~~~~~~g~i~--~~i~~~~~~  283 (284)
                      .  ....++.++++++++|+++  ++|+++|||
T Consensus       314 ~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l  346 (368)
T TIGR02818       314 GGVKGRTELPGIVEQYMKGEIALDDFVTHTMPL  346 (368)
T ss_pred             cCCCcHHHHHHHHHHHHCCCCCchhheeEEecH
Confidence            1  1246799999999999985  579999986

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.5e-38  Score=286.26  Aligned_cols=276  Identities=23%  Similarity=0.300  Sum_probs=224.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++.++++.   ++++ +.+.|+|+++||+|+|.++|+|++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus        11 mka~~~~~~~~~---~~~~-e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~~p~i~GhE~~G~V~~vG~~v~   85 (381)
T PLN02740         11 CKAAVAWGPGEP---LVME-EIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA-QRAYPRILGHEAAGIVESVGEGVE   85 (381)
T ss_pred             eEEEEEecCCCC---cEEE-EeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc-cCCCCccccccceEEEEEeCCCCC
Confidence            899999988865   6888 88999999999999999999999999999887532 235688999999999999999999


Q ss_pred             CCCCCCEEEEecCccc---------------cC------------C---------------CCCCCceeeEEeeecCcee
Q 023273           81 KFKVGDEVYGDINEKA---------------LD------------H---------------PKRNGSLAEYTAVEENLLA  118 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~---------------~~------------~---------------~~~~g~~~~~~~~~~~~~~  118 (284)
                      +|++||||++.+....               ..            +               ...+|+|++|+++|.+.++
T Consensus        86 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~  165 (381)
T PLN02740         86 DLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVV  165 (381)
T ss_pred             cCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeE
Confidence            9999999987542100               00            0               0025899999999999999


Q ss_pred             eCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcC
Q 023273          119 LKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLG  196 (284)
Q Consensus       119 ~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g  196 (284)
                      ++|++++.++++++++++.|||+++ +..++++|++|+|+| +|++|++++++|+.+ |+ +|++++++++|++.++++|
T Consensus       166 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~G~vG~~a~q~ak~~-G~~~Vi~~~~~~~r~~~a~~~G  243 (381)
T PLN02740        166 KIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFG-LGAVGLAVAEGARAR-GASKIIGVDINPEKFEKGKEMG  243 (381)
T ss_pred             ECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCCcEEEEcCChHHHHHHHHcC
Confidence            9999999999999999999999987 568899999999999 699999999999996 87 6999999999999999999


Q ss_pred             CcEEeeCCCcc--ccc----C-CCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCCCCc-----------eeEE-
Q 023273          197 ADLAIDYTKEN--IED----L-PEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPA-----------SSFV-  253 (284)
Q Consensus       197 ~~~~~~~~~~~--~~~----~-~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~-----------~~~~-  253 (284)
                      ++.+++.+..+  +.+    . .+++|++||++|+   ...++.+++++ |+++.+|.+..+..           .++. 
T Consensus       244 a~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g  323 (381)
T PLN02740        244 ITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITG  323 (381)
T ss_pred             CcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEE
Confidence            98888865421  221    1 2379999999996   47888999996 99999987643211           1111 


Q ss_pred             -Ee-c--cHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273          254 -LT-S--DGSILEKLNPYFESGKVKA--IIDPKGLL  283 (284)
Q Consensus       254 -~~-~--~~~~~~~~~~~~~~g~i~~--~i~~~~~~  283 (284)
                       .. .  ...++.++++++.+|.+++  .|+++|||
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l  359 (381)
T PLN02740        324 SVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF  359 (381)
T ss_pred             EecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH
Confidence             11 1  1467899999999998854  69999986

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=5.4e-38  Score=277.20  Aligned_cols=271  Identities=24%  Similarity=0.265  Sum_probs=220.9

Q ss_pred             EEEEcccCCCc-cceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273            3 AWVYKEYGNSQ-SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (284)
Q Consensus         3 a~~~~~~g~~~-~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   81 (284)
                      |+.+..+|.+. ..++++ +.|.|+|+++||+||+.++++|++|.+.+.|.++.  ..+|.++|||++|+|+++|+++++
T Consensus         1 ~~~~~~~g~~~~~~l~~~-~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~~   77 (329)
T TIGR02822         1 AWEVERPGPIEDGPLRFV-ERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV--HRPRVTPGHEVVGEVAGRGADAGG   77 (329)
T ss_pred             CeeeecCCcCCCCCceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC--CCCCccCCcceEEEEEEECCCCcc
Confidence            35667777542 348898 89999999999999999999999999999887642  234689999999999999999999


Q ss_pred             CCCCCEEEEec-----Ccc--------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273           82 FKVGDEVYGDI-----NEK--------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (284)
Q Consensus        82 ~~~Gd~V~~~~-----~~~--------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (284)
                      |++||+|+..+     ..+              ...+...+|+|++|+.+|.+.++++|+++++++++.+++++.|||++
T Consensus        78 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~  157 (329)
T TIGR02822        78 FAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRA  157 (329)
T ss_pred             cCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHH
Confidence            99999997532     110              01122346999999999999999999999999999999999999999


Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCC
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~  222 (284)
                      +...++++|++|+|+| +|++|++++++|+.+ |+++++++++++|.+.++++|+++++++....    .+++|+++++.
T Consensus       158 ~~~~~~~~g~~VlV~G-~g~iG~~a~~~a~~~-G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~----~~~~d~~i~~~  231 (329)
T TIGR02822       158 LLRASLPPGGRLGLYG-FGGSAHLTAQVALAQ-GATVHVMTRGAAARRLALALGAASAGGAYDTP----PEPLDAAILFA  231 (329)
T ss_pred             HHhcCCCCCCEEEEEc-CCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHhCCceeccccccC----cccceEEEECC
Confidence            9878899999999999 599999999999996 88999999999999999999999988754221    34789999887


Q ss_pred             CC---cHHHHHhhccCCEEEEEcCCC-CCCce----------eE--EEeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          223 GQ---CDKALKAVKEGGRVVSIIGSV-TPPAS----------SF--VLTSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       223 g~---~~~~~~~l~~~G~~v~~g~~~-~~~~~----------~~--~~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +.   ...++++|+++|+++.+|... ....+          .+  .....++++.++++++++|++++ |+++|||
T Consensus       232 ~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~-i~~~~~l  307 (329)
T TIGR02822       232 PAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRV-TTHTYPL  307 (329)
T ss_pred             CcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCee-EEEEEeH
Confidence            64   488999999999999998742 11111          11  12234678899999999999985 6788986

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=5.4e-38  Score=280.43  Aligned_cols=276  Identities=22%  Similarity=0.303  Sum_probs=216.6

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||+..+...+.. ..+++. +.+.|+|+++||+|||.++++|++|++.+.|.++  ...+|.++|||++|+|+++|++++
T Consensus        11 ~~~~~~~~~~~~-~~l~~~-~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~--~~~~p~i~GhE~~G~V~~vG~~v~   86 (360)
T PLN02586         11 QKAFGWAARDPS-GVLSPF-HFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG--FTRYPIVPGHEIVGIVTKLGKNVK   86 (360)
T ss_pred             hheeEEEecCCC-CCceEE-eecCCCCCCCeEEEEEEEecCChhhHhhhcCCcC--CCCCCccCCcceeEEEEEECCCCC
Confidence            565555555543 447887 7888999999999999999999999999988653  235688999999999999999999


Q ss_pred             CCCCCCEEEEe-----cCcccc---------------------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccc
Q 023273           81 KFKVGDEVYGD-----INEKAL---------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL  134 (284)
Q Consensus        81 ~~~~Gd~V~~~-----~~~~~~---------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  134 (284)
                      +|++||+|+..     |+.+..                     .+...+|+|++|+++|.+.++++|+++++++++++++
T Consensus        87 ~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~  166 (360)
T PLN02586         87 KFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLC  166 (360)
T ss_pred             ccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhc
Confidence            99999999742     211100                     0122369999999999999999999999999999999


Q ss_pred             hHHHHHHHHH-hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh-HHHHHHcCCcEEeeCCCc-ccccC
Q 023273          135 ATETAYEGLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGADLAIDYTKE-NIEDL  211 (284)
Q Consensus       135 ~~~ta~~al~-~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~-~~~~~~~g~~~~~~~~~~-~~~~~  211 (284)
                      .+.|+|+++. ....++|++|+|.| +|++|++++++|+.+ |+++++++.++++ .+.++++|++.++++... .+...
T Consensus       167 ~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~-Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~  244 (360)
T PLN02586        167 AGITVYSPMKYYGMTEPGKHLGVAG-LGGLGHVAVKIGKAF-GLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAA  244 (360)
T ss_pred             chHHHHHHHHHhcccCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhh
Confidence            9999999985 45678999999988 799999999999996 8898888776665 455678999888876432 23333


Q ss_pred             CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee----------E--EEeccHHHHHHHHHHHHCCCeeEe
Q 023273          212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS----------F--VLTSDGSILEKLNPYFESGKVKAI  276 (284)
Q Consensus       212 ~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~g~i~~~  276 (284)
                      .+++|++||++|+   ...++++++++|+++.+|....+..++          +  ......++++++++++++|+|++.
T Consensus       245 ~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~  324 (360)
T PLN02586        245 IGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITAD  324 (360)
T ss_pred             cCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCCCc
Confidence            3479999999996   367999999999999998653221111          1  111235789999999999999988


Q ss_pred             ecccccC
Q 023273          277 IDPKGLL  283 (284)
Q Consensus       277 i~~~~~~  283 (284)
                      + ++|||
T Consensus       325 ~-~~~~l  330 (360)
T PLN02586        325 I-ELIRM  330 (360)
T ss_pred             E-EEEeH
Confidence            8 47875

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=3.9e-38  Score=275.74  Aligned_cols=265  Identities=17%  Similarity=0.227  Sum_probs=205.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecC-HHHHHHHcCCCCCCC-CCCCcccccceeEEEEEeCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALN-PIDFKRMLGAFSATD-SPLPTIPGYDVAGVVEKVGSQ   78 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~-~~d~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~vG~~   78 (284)
                      ||++++.+++.    ++++ +.+.|+|++|||+|||.+++|| ++|++.+.|.++..+ ..+|.++|||++|+|+++|++
T Consensus         2 ~ka~~~~~~~~----l~~~-e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~   76 (308)
T TIGR01202         2 TQAIVLSGPNQ----IELR-EVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD   76 (308)
T ss_pred             ceEEEEeCCCe----EEEE-EecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence            78999987664    6898 8899999999999999999996 799999888764332 357899999999999999999


Q ss_pred             CCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEc
Q 023273           79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG  158 (284)
Q Consensus        79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g  158 (284)
                      + +|++||||+..+..+........|+|++|+++|.+.++++|++++++. +++. ...|||+++.... .++++++|+|
T Consensus        77 v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~~~-~~~~~vlV~G  152 (308)
T TIGR01202        77 T-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAGAE-VKVLPDLIVG  152 (308)
T ss_pred             C-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHhcc-cCCCcEEEEC
Confidence            8 699999998743222111112369999999999999999999998754 4443 4679999996543 4688999998


Q ss_pred             CCchHHHHHHHHHHHhcCCeE-EEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---cHHHHHhhcc
Q 023273          159 GAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CDKALKAVKE  234 (284)
Q Consensus       159 a~g~~G~~a~~~a~~~~g~~v-i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---~~~~~~~l~~  234 (284)
                       +|++|++++|+|+.+ |+++ ++++.+++|++.+...   .++|+...    ...++|++|||+|+   .+.++++|++
T Consensus       153 -~G~vG~~a~q~ak~~-G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~----~~~g~Dvvid~~G~~~~~~~~~~~l~~  223 (308)
T TIGR01202       153 -HGTLGRLLARLTKAA-GGSPPAVWETNPRRRDGATGY---EVLDPEKD----PRRDYRAIYDASGDPSLIDTLVRRLAK  223 (308)
T ss_pred             -CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHhhhhc---cccChhhc----cCCCCCEEEECCCCHHHHHHHHHhhhc
Confidence             799999999999996 8874 4556677777666543   34554321    24689999999996   3789999999


Q ss_pred             CCEEEEEcCCCCCCcee----------EE--EeccHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273          235 GGRVVSIIGSVTPPASS----------FV--LTSDGSILEKLNPYFESGKVKA--IIDPKGLL  283 (284)
Q Consensus       235 ~G~~v~~g~~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~g~i~~--~i~~~~~~  283 (284)
                      +|+++++|.+..+..++          +.  .....++++++++++++|++++  .|+++|||
T Consensus       224 ~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l  286 (308)
T TIGR01202       224 GGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLITHQRPA  286 (308)
T ss_pred             CcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhccceeecH
Confidence            99999998764332221          11  1124678999999999999876  69999986

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=1.1e-37  Score=279.32  Aligned_cols=275  Identities=28%  Similarity=0.342  Sum_probs=224.2

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++..++..   ++++ +.|.|+|+++||+||+.++++|++|++.+.|.++.  ..+|.++|||++|+|+++|++++
T Consensus         3 ~~a~~~~~~~~~---~~~~-~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~--~~~p~v~G~E~~G~V~~vG~~v~   76 (368)
T cd08300           3 CKAAVAWEAGKP---LSIE-EVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE--GLFPVILGHEGAGIVESVGEGVT   76 (368)
T ss_pred             ceEEEEecCCCC---cEEE-EeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc--CCCCceeccceeEEEEEeCCCCc
Confidence            899999888765   7898 88999999999999999999999999999887642  25688999999999999999999


Q ss_pred             CCCCCCEEEEecCc----c---ccC--------------------------------CCCCCCceeeEEeeecCceeeCC
Q 023273           81 KFKVGDEVYGDINE----K---ALD--------------------------------HPKRNGSLAEYTAVEENLLALKP  121 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~----~---~~~--------------------------------~~~~~g~~~~~~~~~~~~~~~ip  121 (284)
                      +|++||+|++.+..    +   ...                                +....|+|++|+.++.+.++++|
T Consensus        77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  156 (368)
T cd08300          77 SVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKIN  156 (368)
T ss_pred             cCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCC
Confidence            99999999875210    0   000                                00124799999999999999999


Q ss_pred             CCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcE
Q 023273          122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL  199 (284)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~  199 (284)
                      +++++++++++++++.|||+++ +..++++|++|+|+| +|++|++++++|+.+ |+ ++++++++++|.+.++++|+++
T Consensus       157 ~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~vG~~a~~~ak~~-G~~~vi~~~~~~~~~~~~~~lGa~~  234 (368)
T cd08300         157 PEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFG-LGAVGLAVIQGAKAA-GASRIIGIDINPDKFELAKKFGATD  234 (368)
T ss_pred             CCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCCE
Confidence            9999999999999999999987 568899999999998 699999999999996 88 6999999999999999999999


Q ss_pred             EeeCCCc--cccc-----CCCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCC--CC---cee---------EEE
Q 023273          200 AIDYTKE--NIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVT--PP---ASS---------FVL  254 (284)
Q Consensus       200 ~~~~~~~--~~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~--~~---~~~---------~~~  254 (284)
                      ++++.+.  ++.+     ..+++|++||++|+   ...++++++++ |+++.+|....  ..   .+.         +..
T Consensus       235 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~  314 (368)
T cd08300         235 CVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAF  314 (368)
T ss_pred             EEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEe
Confidence            9987643  2221     13489999999995   47889999886 99999986531  11   000         011


Q ss_pred             e--ccHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273          255 T--SDGSILEKLNPYFESGKVKA--IIDPKGLL  283 (284)
Q Consensus       255 ~--~~~~~~~~~~~~~~~g~i~~--~i~~~~~~  283 (284)
                      .  ...+++.++++++++|++++  .|+++|||
T Consensus       315 ~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l  347 (368)
T cd08300         315 GGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL  347 (368)
T ss_pred             cccCcHHHHHHHHHHHHcCCCChhhceeeeEcH
Confidence            1  13578899999999999875  59999986

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=1.1e-37  Score=279.55  Aligned_cols=275  Identities=21%  Similarity=0.260  Sum_probs=223.4

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++.+   ++++ +.+.|+|+++||+|++.++++|++|++.++|..+  ...+|.++|||++|+|+++|++++
T Consensus         3 ~ka~~~~~~~~~---~~l~-~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~--~~~~p~i~G~e~~G~V~~vG~~v~   76 (369)
T cd08301           3 CKAAVAWEAGKP---LVIE-EVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ--TPLFPRILGHEAAGIVESVGEGVT   76 (369)
T ss_pred             cEEEEEecCCCC---cEEE-EeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC--CCCCCcccccccceEEEEeCCCCC
Confidence            899999988776   7998 8899999999999999999999999999988653  235688999999999999999999


Q ss_pred             CCCCCCEEEEecCcc-------ccC---------------------------------CCCCCCceeeEEeeecCceeeC
Q 023273           81 KFKVGDEVYGDINEK-------ALD---------------------------------HPKRNGSLAEYTAVEENLLALK  120 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~-------~~~---------------------------------~~~~~g~~~~~~~~~~~~~~~i  120 (284)
                      +|++||||++.+...       ..+                                 +....|+|++|+.++...++++
T Consensus        77 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  156 (369)
T cd08301          77 DLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKI  156 (369)
T ss_pred             ccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEEC
Confidence            999999998753110       000                                 0002488999999999999999


Q ss_pred             CCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCc
Q 023273          121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD  198 (284)
Q Consensus       121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~  198 (284)
                      |+++++++++++++++.|+|+++ +..++++|++|+|+| +|++|++++++|+.+ |+ +|+++++++++.+.++++|++
T Consensus       157 P~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~q~ak~~-G~~~vi~~~~~~~~~~~~~~~Ga~  234 (369)
T cd08301         157 NPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFG-LGAVGLAVAEGARIR-GASRIIGVDLNPSKFEQAKKFGVT  234 (369)
T ss_pred             CCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCc
Confidence            99999999999999999999987 568899999999998 699999999999996 87 799999999999999999998


Q ss_pred             EEeeCCCc--cccc-----CCCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCCCCce-----------eEEE--
Q 023273          199 LAIDYTKE--NIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPAS-----------SFVL--  254 (284)
Q Consensus       199 ~~~~~~~~--~~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~-----------~~~~--  254 (284)
                      .++++...  .+.+     ..+++|++||++|.   ...++++++++ |+++.+|....+..+           .+..  
T Consensus       235 ~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~  314 (369)
T cd08301         235 EFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTL  314 (369)
T ss_pred             eEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEe
Confidence            88876541  2211     13479999999985   47789999996 999999875422111           1111  


Q ss_pred             -ec--cHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273          255 -TS--DGSILEKLNPYFESGKVKA--IIDPKGLL  283 (284)
Q Consensus       255 -~~--~~~~~~~~~~~~~~g~i~~--~i~~~~~~  283 (284)
                       ..  ...+++++++++++|+++.  +|+++|||
T Consensus       315 ~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l  348 (369)
T cd08301         315 FGGYKPKTDLPNLVEKYMKKELELEKFITHELPF  348 (369)
T ss_pred             cCCCChHHHHHHHHHHHHcCCCCcHHheeeeecH
Confidence             11  2457899999999998754  68999986

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.4e-37  Score=279.42  Aligned_cols=272  Identities=24%  Similarity=0.286  Sum_probs=220.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++.++++.   ++++ +.+.|+|+++||+|||.++++|++|++.+.+..     .+|.++|||++|+|+++|++++
T Consensus        13 mka~~~~~~~~~---~~~~-e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~-----~~p~i~GhE~~G~V~~vG~~v~   83 (378)
T PLN02827         13 CRAAVAWGAGEA---LVME-EVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA-----LFPRIFGHEASGIVESIGEGVT   83 (378)
T ss_pred             eEEEEEecCCCC---ceEE-EeecCCCCCCEEEEEEEEEecChhHHHHhcCCC-----CCCeeecccceEEEEEcCCCCc
Confidence            899999887755   7888 889999999999999999999999999887642     3578999999999999999999


Q ss_pred             CCCCCCEEEEecCccc---------------cC-------------------C-----CCCCCceeeEEeeecCceeeCC
Q 023273           81 KFKVGDEVYGDINEKA---------------LD-------------------H-----PKRNGSLAEYTAVEENLLALKP  121 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~---------------~~-------------------~-----~~~~g~~~~~~~~~~~~~~~ip  121 (284)
                      +|++||+|++......               ..                   +     ....|+|++|+.+|.+.++++|
T Consensus        84 ~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP  163 (378)
T PLN02827         84 EFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVD  163 (378)
T ss_pred             ccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECC
Confidence            9999999988642100               00                   0     0024899999999999999999


Q ss_pred             CCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcE
Q 023273          122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADL  199 (284)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~  199 (284)
                      +++++++++++.+++.++|+++ +..++++|++|+|+| +|++|++++++|+.+ |++ +++++.+++|.+.++++|+++
T Consensus       164 ~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G-~G~vG~~~iqlak~~-G~~~vi~~~~~~~~~~~a~~lGa~~  241 (378)
T PLN02827        164 PLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFG-LGTVGLSVAQGAKLR-GASQIIGVDINPEKAEKAKTFGVTD  241 (378)
T ss_pred             CCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCcE
Confidence            9999999998888888999876 567899999999998 699999999999996 874 777777999999999999998


Q ss_pred             EeeCCCc--cccc----C-CCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCCCCcee-----------EE--Ee
Q 023273          200 AIDYTKE--NIED----L-PEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPASS-----------FV--LT  255 (284)
Q Consensus       200 ~~~~~~~--~~~~----~-~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~~-----------~~--~~  255 (284)
                      +++++..  ++.+    . .+++|++||++|.   ...++++++++ |+++.+|.+..+..+.           +.  ..
T Consensus       242 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  321 (378)
T PLN02827        242 FINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLF  321 (378)
T ss_pred             EEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeec
Confidence            8887542  2222    1 3489999999995   47899999998 9999998764221111           11  11


Q ss_pred             -c--cHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273          256 -S--DGSILEKLNPYFESGKVKA--IIDPKGLL  283 (284)
Q Consensus       256 -~--~~~~~~~~~~~~~~g~i~~--~i~~~~~~  283 (284)
                       .  ...++.++++++++|+|++  .|+++|||
T Consensus       322 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l  354 (378)
T PLN02827        322 GGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF  354 (378)
T ss_pred             CCCchhhhHHHHHHHHHcCCCChHHheEEEecH
Confidence             1  2457899999999999998  79999986

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=7.5e-38  Score=277.68  Aligned_cols=267  Identities=19%  Similarity=0.181  Sum_probs=207.2

Q ss_pred             eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCC--CCCCCcccccceeEEEEEeCCCC
Q 023273            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT--DSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~--~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      +++++.++++    ++++ +.+.|+ ++|||+|||.++|||++|++.++|.++..  ...+|.++|||++|+|+++|.+ 
T Consensus         4 ~~~~~~~~~~----~~~~-~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~-   76 (341)
T cd08237           4 QVYRLVRPKF----FEVT-YEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG-   76 (341)
T ss_pred             cceEEeccce----EEEe-ecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC-
Confidence            4788888776    5998 888884 99999999999999999999999875321  1357899999999999998764 


Q ss_pred             CCCCCCCEEEEecCccc---------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH
Q 023273           80 KKFKVGDEVYGDINEKA---------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE  144 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~---------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~  144 (284)
                       .|++||||+..+....               ..+...+|+|+||+++|++.++++|+++++++++++ .+++++|+++.
T Consensus        77 -~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~~  154 (341)
T cd08237          77 -TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAIS  154 (341)
T ss_pred             -ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHHHH
Confidence             7999999987532110               011224699999999999999999999999876644 57778999884


Q ss_pred             ---hcccCCCCEEEEEcCCchHHHHHHHHHHH-hcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEe
Q 023273          145 ---RSAFSAGKSILVLGGAGGVGTMVIQLAKH-VFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFD  220 (284)
Q Consensus       145 ---~~~~~~g~~vlI~ga~g~~G~~a~~~a~~-~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid  220 (284)
                         ....++|++|+|+| +|++|++++++++. .++.+|++++++++|++.+++.+....++.    +.+ ..++|++||
T Consensus       155 ~~~~~~~~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~~----~~~-~~g~d~viD  228 (341)
T cd08237         155 RFEQIAHKDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLIDD----IPE-DLAVDHAFE  228 (341)
T ss_pred             HHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehhh----hhh-ccCCcEEEE
Confidence               24568999999999 69999999999986 335789999999999999988765533321    111 136999999


Q ss_pred             CCCC------cHHHHHhhccCCEEEEEcCCCCCCce----------eE--EEeccHHHHHHHHHHHHCC-----CeeEee
Q 023273          221 AVGQ------CDKALKAVKEGGRVVSIIGSVTPPAS----------SF--VLTSDGSILEKLNPYFESG-----KVKAII  277 (284)
Q Consensus       221 ~~g~------~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~g-----~i~~~i  277 (284)
                      ++|.      .+.++++++++|+++++|.+..+..+          ++  ......++++++++++++|     .+++.|
T Consensus       229 ~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i  308 (341)
T cd08237         229 CVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPEVAEYLRKLV  308 (341)
T ss_pred             CCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCCcccCChHHHh
Confidence            9993      47899999999999999865432111          11  1122457899999999998     688899


Q ss_pred             cccccC
Q 023273          278 DPKGLL  283 (284)
Q Consensus       278 ~~~~~~  283 (284)
                      +++|||
T Consensus       309 ~~~~~l  314 (341)
T cd08237         309 GGVFPV  314 (341)
T ss_pred             cccccc
Confidence            999986

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=2.7e-37  Score=275.69  Aligned_cols=273  Identities=21%  Similarity=0.276  Sum_probs=209.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCC-CCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD-SPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      ||++++..++.  + ++++ +.|.|+|+++||+|||.++++|++|++.+.|.++..+ ..+|.++|||++|+|+++|++ 
T Consensus         1 mka~~~~~~~~--~-l~~~-~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-   75 (355)
T cd08230           1 MKAIAVKPGKP--G-VRVV-DIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-   75 (355)
T ss_pred             CceeEecCCCC--C-CeEE-eCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-
Confidence            89999986443  2 7898 8999999999999999999999999999998754322 235789999999999999999 


Q ss_pred             CCCCCCCEEEEecCcc----c---c-------------CCC-CCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHH
Q 023273           80 KKFKVGDEVYGDINEK----A---L-------------DHP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATET  138 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~----~---~-------------~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t  138 (284)
                      +.|++||||+..+...    .   .             .+. ..+|+|++|+++|.+.++++|++++  +.+++..++.+
T Consensus        76 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~  153 (355)
T cd08230          76 SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSV  153 (355)
T ss_pred             CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC--cceeecchHHH
Confidence            9999999998754210    0   0             010 1369999999999999999999998  34444455555


Q ss_pred             HHHHHH-------hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcCCcEEeeCCCccc
Q 023273          139 AYEGLE-------RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAIDYTKENI  208 (284)
Q Consensus       139 a~~al~-------~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~~~~~~~  208 (284)
                      +++++.       ..+.++|++|+|.| +|++|++++++|+.+ |++++++++   +++|++.++++|++. +++..+++
T Consensus       154 ~~~a~~~~~~~~~~~~~~~g~~vlI~G-~G~vG~~a~q~ak~~-G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~~  230 (355)
T cd08230         154 VEKAIEQAEAVQKRLPTWNPRRALVLG-AGPIGLLAALLLRLR-GFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTPV  230 (355)
T ss_pred             HHHHHHHHhhhhhhcccCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccch
Confidence            554442       12357899999998 699999999999996 889999887   688999999999986 45544332


Q ss_pred             c--cCCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCC--CCcee-------E---------EEeccHHHHHHHH
Q 023273          209 E--DLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT--PPASS-------F---------VLTSDGSILEKLN  265 (284)
Q Consensus       209 ~--~~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~--~~~~~-------~---------~~~~~~~~~~~~~  265 (284)
                      .  ....++|++||++|+   ...++++|+++|+++++|.+..  +..++       +         ......+++.+++
T Consensus       231 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~  310 (355)
T cd08230         231 AEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQAV  310 (355)
T ss_pred             hhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHHH
Confidence            2  124579999999996   3789999999999999987543  11111       1         0112356889999


Q ss_pred             HHHHCCC------eeEeecccccC
Q 023273          266 PYFESGK------VKAIIDPKGLL  283 (284)
Q Consensus       266 ~~~~~g~------i~~~i~~~~~~  283 (284)
                      ++++++.      ++++|+++|||
T Consensus       311 ~~l~~~~~~~~~~~~~~i~~~~~l  334 (355)
T cd08230         311 EDLAQWKYRWPGVLERLITRRVPL  334 (355)
T ss_pred             HHHHhcccccccchHHheeeeecH
Confidence            9998776      67789999986

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=5.1e-37  Score=270.58  Aligned_cols=270  Identities=26%  Similarity=0.353  Sum_probs=220.4

Q ss_pred             CeEEEEcccCCCc--cceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCC
Q 023273            1 MKAWVYKEYGNSQ--SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ   78 (284)
Q Consensus         1 m~a~~~~~~g~~~--~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~   78 (284)
                      ||++++.+++.+.  +.+++. +.|.|+|+++||+|++.++++|++|++.+.|.++. ...+|.++|||++|+|+++|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~-~~~~p~v~G~e~~G~V~~vG~~   78 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLP-EPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS-TKALPVPPGFEGSGTVVAAGGG   78 (324)
T ss_pred             CeEEEEeecCCCccccEEEec-ccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC-CCCCCcCCCcceEEEEEEECCC
Confidence            9999999988541  237888 78889999999999999999999999999887642 2346789999999999999999


Q ss_pred             CCC-CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEE
Q 023273           79 VKK-FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVL  157 (284)
Q Consensus        79 ~~~-~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~  157 (284)
                      +++ |++||+|++...        .+|+|++|+.+|.+.++++|+++++++++.+++.+.|||.++...+. ++++++|+
T Consensus        79 v~~~~~vGd~V~~~~~--------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~-~~~~vlv~  149 (324)
T cd08291          79 PLAQSLIGKRVAFLAG--------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETARE-EGAKAVVH  149 (324)
T ss_pred             ccccCCCCCEEEecCC--------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHhhcc-CCCcEEEE
Confidence            986 999999998652        14999999999999999999999999999888888899866655555 55566665


Q ss_pred             -cCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHH
Q 023273          158 -GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKA  228 (284)
Q Consensus       158 -ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~  228 (284)
                       +++|++|++++++|+.+ |+++++++++++|.+.++++|++++++++..++.+    .  ++++|++||++|+  ....
T Consensus       150 ~~g~g~vG~~a~q~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~  228 (324)
T cd08291         150 TAAASALGRMLVRLCKAD-GIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQI  228 (324)
T ss_pred             ccCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHH
Confidence             77999999999999996 99999999999999999999999999876544322    1  3579999999986  4678


Q ss_pred             HHhhccCCEEEEEcCCCCC----C--------ceeEEE--------eccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          229 LKAVKEGGRVVSIIGSVTP----P--------ASSFVL--------TSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       229 ~~~l~~~G~~v~~g~~~~~----~--------~~~~~~--------~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +++++++|+++.+|.....    .        ..++..        ....+.+++++++++ |.+++.|+++|||
T Consensus       229 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l  302 (324)
T cd08291         229 LLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRYPL  302 (324)
T ss_pred             HHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEEcH
Confidence            9999999999999854211    1        111110        012567889999998 9999999999986

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=2.5e-37  Score=254.10  Aligned_cols=271  Identities=30%  Similarity=0.449  Sum_probs=229.5

Q ss_pred             eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (284)
Q Consensus         2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   81 (284)
                      |+++++++|+|.+.++++ ++++|+...++|+|+.+++.|||+|+..++|.||..+ ++|.+-|+|++|+|+.+|+++.+
T Consensus        21 kalvY~~hgdP~kVlql~-~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP-~~PAVgGnEGv~eVv~vGs~vkg   98 (354)
T KOG0025|consen   21 KALVYSEHGDPAKVLQLK-NLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRP-ELPAVGGNEGVGEVVAVGSNVKG   98 (354)
T ss_pred             ceeeecccCCchhhheee-cccCCCCCCCceeeeeeecCCChHHhhhhccccCCCC-CCCcccCCcceEEEEEecCCcCc
Confidence            789999999998899999 8999988888899999999999999999999998665 67899999999999999999999


Q ss_pred             CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 023273           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA  160 (284)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~  160 (284)
                      |++||+|+....        ..|+|++|.+.+++.++++++.++++.||.+..+.+|||.++ +..++.+||+|+-.||.
T Consensus        99 fk~Gd~VIp~~a--------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNgan  170 (354)
T KOG0025|consen   99 FKPGDWVIPLSA--------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGAN  170 (354)
T ss_pred             cCCCCeEeecCC--------CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcc
Confidence            999999998764        379999999999999999999999999999999999999999 56899999999999999


Q ss_pred             chHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcEEeeCCCcc---ccc---CCCcccEEEeCCCC--cHHH
Q 023273          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLAIDYTKEN---IED---LPEKFDVVFDAVGQ--CDKA  228 (284)
Q Consensus       161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~~~~~~~~---~~~---~~~~~d~vid~~g~--~~~~  228 (284)
                      +.+|.+++|+|+++ |++.+-++++....+.+    +.+|+++++..++..   ..+   ....+.+.|||+|+  ...+
T Consensus       171 S~VG~~ViQlaka~-GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~i  249 (354)
T KOG0025|consen  171 SGVGQAVIQLAKAL-GIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEI  249 (354)
T ss_pred             cHHHHHHHHHHHHh-CcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHH
Confidence            99999999999995 99999998866555444    579999998654322   111   24578899999995  5788


Q ss_pred             HHhhccCCEEEEEcCCCC-CCcee-------------EEEe----------ccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          229 LKAVKEGGRVVSIIGSVT-PPASS-------------FVLT----------SDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       229 ~~~l~~~G~~v~~g~~~~-~~~~~-------------~~~~----------~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      .+.|.++|.++.+|+.+. |..++             |++.          ...+.++++.+|+.+|+|...-....||
T Consensus       250 ar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L  328 (354)
T KOG0025|consen  250 ARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPL  328 (354)
T ss_pred             HHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeec
Confidence            999999999999999863 22221             1111          1236789999999999998776565554

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.1e-36  Score=272.92  Aligned_cols=275  Identities=21%  Similarity=0.293  Sum_probs=215.5

Q ss_pred             eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (284)
Q Consensus         2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   81 (284)
                      ||+.+...+.+ ..+++. +.+.|+|+++||+|+|.++++|++|++.+.|.++.  ..+|.++|||++|+|+++|+++++
T Consensus         6 ~a~~~~~~~~~-~~l~~~-~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~--~~~p~i~GhE~aG~Vv~vG~~v~~   81 (375)
T PLN02178          6 KAFGWAANDES-GVLSPF-HFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF--SRYPIIPGHEIVGIATKVGKNVTK   81 (375)
T ss_pred             eeEEEEEccCC-CCceEE-eecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC--CCCCcccCceeeEEEEEECCCCCc
Confidence            44555545543 347777 78888999999999999999999999999886531  245789999999999999999999


Q ss_pred             CCCCCEEEEe-----cCcccc---------------------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccch
Q 023273           82 FKVGDEVYGD-----INEKAL---------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA  135 (284)
Q Consensus        82 ~~~Gd~V~~~-----~~~~~~---------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~  135 (284)
                      |++||||+..     ++.+..                     .+...+|+|++|+++|.+.++++|+++++++++++++.
T Consensus        82 ~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~  161 (375)
T PLN02178         82 FKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCA  161 (375)
T ss_pred             cCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhcc
Confidence            9999999742     211100                     01223699999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcc--cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh-hHHHHHHcCCcEEeeCCCc-ccccC
Q 023273          136 TETAYEGLERSA--FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKE-NIEDL  211 (284)
Q Consensus       136 ~~ta~~al~~~~--~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~-~~~~~  211 (284)
                      ..|+|+++....  .++|++|+|.| +|++|++++++|+.+ |+++++++.+++ +.+.++++|+++++++.+. .+...
T Consensus       162 ~~ta~~al~~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~-Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~  239 (375)
T PLN02178        162 GITVYSPMKYYGMTKESGKRLGVNG-LGGLGHIAVKIGKAF-GLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEA  239 (375)
T ss_pred             chHHHHHHHHhCCCCCCCCEEEEEc-ccHHHHHHHHHHHHc-CCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHh
Confidence            999999985433  36899999998 699999999999996 899988887655 4677789999988876432 12222


Q ss_pred             CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee----------E--EEeccHHHHHHHHHHHHCCCeeEe
Q 023273          212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS----------F--VLTSDGSILEKLNPYFESGKVKAI  276 (284)
Q Consensus       212 ~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~g~i~~~  276 (284)
                      .+++|++||++|.   ...++++++++|+++.+|.+..+..++          +  ......++++++++++++|++++.
T Consensus       240 ~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~  319 (375)
T PLN02178        240 VGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSD  319 (375)
T ss_pred             hCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCccc
Confidence            3479999999985   378999999999999998754322111          1  112245789999999999999998


Q ss_pred             ecccccC
Q 023273          277 IDPKGLL  283 (284)
Q Consensus       277 i~~~~~~  283 (284)
                      | ++|||
T Consensus       320 i-~~~~l  325 (375)
T PLN02178        320 I-ELIKM  325 (375)
T ss_pred             E-EEEeH
Confidence            8 56886

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=3e-36  Score=269.83  Aligned_cols=274  Identities=25%  Similarity=0.316  Sum_probs=222.2

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++..+++.   ++++ +.|.|.|+++||+|||.++++|++|++.+.|.++   ..+|.++|||++|+|+++|++++
T Consensus         3 ~ka~~~~~~~~~---~~~~-~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~---~~~p~i~G~e~~G~V~~vG~~v~   75 (365)
T cd08277           3 CKAAVAWEAGKP---LVIE-EIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA---TLFPVILGHEGAGIVESVGEGVT   75 (365)
T ss_pred             cEEEEEccCCCC---cEEE-EEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC---CCCCeecccceeEEEEeeCCCCc
Confidence            789999987765   7898 8899999999999999999999999999988653   35678999999999999999999


Q ss_pred             CCCCCCEEEEecCcc-------ccC-------------------------------CCCCCCceeeEEeeecCceeeCCC
Q 023273           81 KFKVGDEVYGDINEK-------ALD-------------------------------HPKRNGSLAEYTAVEENLLALKPK  122 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~-------~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~  122 (284)
                      ++++||+|++.+...       ...                               .....|+|++|++++.+.++++|+
T Consensus        76 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~  155 (365)
T cd08277          76 NLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDP  155 (365)
T ss_pred             cCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCC
Confidence            999999998753110       000                               001258999999999999999999


Q ss_pred             CCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEE
Q 023273          123 NLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLA  200 (284)
Q Consensus       123 ~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~  200 (284)
                      ++++++++++++++.|||+++ +..++++|++|+|+| +|++|++++++|+.+ |+ +|++++++++|.+.++++|++++
T Consensus       156 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~~  233 (365)
T cd08277         156 AAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIA-GASRIIGVDINEDKFEKAKEFGATDF  233 (365)
T ss_pred             CCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCCcE
Confidence            999999999999999999987 678899999999998 799999999999996 87 79999999999999999999888


Q ss_pred             eeCCCcc--ccc-----CCCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCC-CC---------ceeE--EE-ec
Q 023273          201 IDYTKEN--IED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVT-PP---------ASSF--VL-TS  256 (284)
Q Consensus       201 ~~~~~~~--~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~-~~---------~~~~--~~-~~  256 (284)
                      ++....+  +.+     ..+++|++||++|+   ...++++++++ |+++.+|.... ..         ...+  .. ..
T Consensus       234 i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~  313 (365)
T cd08277         234 INPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLILGRTWKGSFFGG  313 (365)
T ss_pred             eccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhhCCEEEeeecCC
Confidence            8765421  111     13579999999995   37889999885 99999987531 10         1111  11 11


Q ss_pred             --cHHHHHHHHHHHHCCCe--eEeecccccC
Q 023273          257 --DGSILEKLNPYFESGKV--KAIIDPKGLL  283 (284)
Q Consensus       257 --~~~~~~~~~~~~~~g~i--~~~i~~~~~~  283 (284)
                        ...++++++++++++.+  +++|+++|||
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l  344 (365)
T cd08277         314 FKSRSDVPKLVSKYMNKKFDLDELITHVLPF  344 (365)
T ss_pred             CChHHHHHHHHHHHHCCCcChhHheeeEEch
Confidence              24578999999999875  4679999986

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=1.7e-36  Score=273.16  Aligned_cols=272  Identities=23%  Similarity=0.289  Sum_probs=207.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCC-------CCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEE
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-------EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVE   73 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~-------~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~   73 (284)
                      |||+++.++++    ++++ +.|.|+|+       +|||+|||.++|||++|++.+.|.++   ..+|.++|||++|+|+
T Consensus         3 mka~v~~~~~~----~~~~-e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~---~~~p~i~GhE~~G~V~   74 (393)
T TIGR02819         3 NRGVVYLGPGK----VEVQ-DIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT---APTGLVLGHEITGEVI   74 (393)
T ss_pred             ceEEEEecCCc----eeEE-eccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC---CCCCccccceeEEEEE
Confidence            99999998886    5888 88888874       68999999999999999999988642   3468999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecC----cc-----------cc---------CCC----CCCCceeeEEeeecC--ceeeCCCC
Q 023273           74 KVGSQVKKFKVGDEVYGDIN----EK-----------AL---------DHP----KRNGSLAEYTAVEEN--LLALKPKN  123 (284)
Q Consensus        74 ~vG~~~~~~~~Gd~V~~~~~----~~-----------~~---------~~~----~~~g~~~~~~~~~~~--~~~~ip~~  123 (284)
                      ++|+++++|++||||+..+.    .+           ..         .+.    ..+|+|+||+++|..  .++++|++
T Consensus        75 ~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~  154 (393)
T TIGR02819        75 EKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDR  154 (393)
T ss_pred             EEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCc
Confidence            99999999999999976421    10           00         010    136999999999964  79999998


Q ss_pred             CCH----HhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEE-EeCChhhHHHHHHcCCc
Q 023273          124 LSF----VEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVA-ATSSTAKLDLLRSLGAD  198 (284)
Q Consensus       124 ~~~----~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~-~~~~~~~~~~~~~~g~~  198 (284)
                      ++.    ..++++..++.++|+++...++++|++|+|.| +|++|++++++|+.+ |+++++ ++.+++|.+.++++|++
T Consensus       155 ~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~-Ga~~vi~~d~~~~r~~~a~~~Ga~  232 (393)
T TIGR02819       155 DQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAG-AGPVGLAAAASAQLL-GAAVVIVGDLNPARLAQARSFGCE  232 (393)
T ss_pred             ccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHHHHHcCCe
Confidence            653    34567788889999999888899999999976 799999999999996 877554 45688899999999987


Q ss_pred             EEeeC-CCccccc----C--CCcccEEEeCCCC-----------------cHHHHHhhccCCEEEEEcCCC-CCC-c---
Q 023273          199 LAIDY-TKENIED----L--PEKFDVVFDAVGQ-----------------CDKALKAVKEGGRVVSIIGSV-TPP-A---  249 (284)
Q Consensus       199 ~~~~~-~~~~~~~----~--~~~~d~vid~~g~-----------------~~~~~~~l~~~G~~v~~g~~~-~~~-~---  249 (284)
                      . +++ ...++.+    .  .+++|++||++|.                 ++.++++++++|+++.+|.+. .+. .   
T Consensus       233 ~-v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~  311 (393)
T TIGR02819       233 T-VDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDA  311 (393)
T ss_pred             E-EecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccc
Confidence            4 443 2222211    1  3579999999994                 467899999999999999863 111 0   


Q ss_pred             ------eeEEE------------e-ccH-HHHHHHHHHHHCCCeeE--eec-ccccC
Q 023273          250 ------SSFVL------------T-SDG-SILEKLNPYFESGKVKA--IID-PKGLL  283 (284)
Q Consensus       250 ------~~~~~------------~-~~~-~~~~~~~~~~~~g~i~~--~i~-~~~~~  283 (284)
                            +++..            . ... +.+.++++++++|++++  +|+ ++|||
T Consensus       312 ~~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l  368 (393)
T TIGR02819       312 AAKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISL  368 (393)
T ss_pred             cccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecH
Confidence                  11100            0 011 23468999999999864  455 78886

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=3.3e-36  Score=268.74  Aligned_cols=274  Identities=24%  Similarity=0.326  Sum_probs=220.0

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |+++++..+++.   ++++ +.+.|+|+++||+||+.++++|++|++.+.|.++.  ..+|.++|||++|+|+++|++++
T Consensus        10 ~~~~~~~~~~~~---~~~~-~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~--~~~p~i~G~E~~G~Vv~vG~~v~   83 (357)
T PLN02514         10 TTGWAARDPSGH---LSPY-TYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM--SNYPMVPGHEVVGEVVEVGSDVS   83 (357)
T ss_pred             EEEEEEecCCCC---ceEE-eecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc--CCCCccCCceeeEEEEEECCCcc
Confidence            578999999976   8898 88999999999999999999999999998886532  24678999999999999999999


Q ss_pred             CCCCCCEEEEe-----cCccc---------------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccc
Q 023273           81 KFKVGDEVYGD-----INEKA---------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL  134 (284)
Q Consensus        81 ~~~~Gd~V~~~-----~~~~~---------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  134 (284)
                      +|++||+|+..     ++.+.                     ..+...+|+|++|+++|.+.++++|+++++++++.+++
T Consensus        84 ~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  163 (357)
T PLN02514         84 KFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLC  163 (357)
T ss_pred             cccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhh
Confidence            99999999742     11100                     00112369999999999999999999999999999999


Q ss_pred             hHHHHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcEEeeCCCc-ccccC
Q 023273          135 ATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKE-NIEDL  211 (284)
Q Consensus       135 ~~~ta~~al~~-~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~-~~~~~  211 (284)
                      ++.|||+++.. ...++|++++|+| +|++|++++++|+.+ |+++++++.++++...+ +++|++.++++... .+.+.
T Consensus       164 ~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~-G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~  241 (357)
T PLN02514        164 AGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAM-GHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEA  241 (357)
T ss_pred             hHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHh
Confidence            99999999854 5567999999997 799999999999996 88999888887776555 67998877765432 22233


Q ss_pred             CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee----------E--EEeccHHHHHHHHHHHHCCCeeEe
Q 023273          212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS----------F--VLTSDGSILEKLNPYFESGKVKAI  276 (284)
Q Consensus       212 ~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~g~i~~~  276 (284)
                      ..++|++||++|.   ...++++++++|+++.+|.+..+..++          +  .......+++++++++++|++++.
T Consensus       242 ~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~  321 (357)
T PLN02514        242 ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTSM  321 (357)
T ss_pred             cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcCc
Confidence            4579999999984   478999999999999998764321111          1  112345689999999999999988


Q ss_pred             ecccccC
Q 023273          277 IDPKGLL  283 (284)
Q Consensus       277 i~~~~~~  283 (284)
                      | ++|||
T Consensus       322 i-~~~~l  327 (357)
T PLN02514        322 I-EVVKM  327 (357)
T ss_pred             E-EEEcH
Confidence            8 47886

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=8.6e-36  Score=262.32  Aligned_cols=271  Identities=24%  Similarity=0.322  Sum_probs=225.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++.+++++.+.++++ +.|.|.+.++||+|++.++++|++|++.+.|.++. ....|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~-~~~~p~~~G~e~~G~V~~~G~~v~   78 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIG-EVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY-KPELPAIGGSEAVGVVDAVGEGVK   78 (324)
T ss_pred             CeeEEEccCCChhHeEEEe-ecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC-CCCCCCCCCcceEEEEEEeCCCCC
Confidence            9999999887642347888 88999999999999999999999999998887642 234578899999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA  160 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~  160 (284)
                      ++++||+|++...         .|+|++|+.++...++++|++++.++++.+++.+.|+|+++...++.+|++|+|+|++
T Consensus        79 ~~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~  149 (324)
T cd08292          79 GLQVGQRVAVAPV---------HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAG  149 (324)
T ss_pred             CCCCCCEEEeccC---------CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHhhCCCCCCEEEEcccc
Confidence            9999999998642         5899999999999999999999999999998888999999877899999999999999


Q ss_pred             chHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHhh
Q 023273          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKAV  232 (284)
Q Consensus       161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~l  232 (284)
                      |.+|++++++|+.+ |+++++++.++++.+.++++|.+.+++++...+..    .  ++++|++||++|+  ...+++++
T Consensus       150 g~ig~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l  228 (324)
T cd08292         150 GAVGKLVAMLAAAR-GINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLL  228 (324)
T ss_pred             cHHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhh
Confidence            99999999999996 99999999999999988889988888876544322    1  3579999999986  47889999


Q ss_pred             ccCCEEEEEcCCCC-C----------CceeEEEec------------cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          233 KEGGRVVSIIGSVT-P----------PASSFVLTS------------DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       233 ~~~G~~v~~g~~~~-~----------~~~~~~~~~------------~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +++|+++.+|.... .          .+..+....            ..+.++++++++.+|.+++.+.++||+
T Consensus       229 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~  302 (324)
T cd08292         229 GEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDL  302 (324)
T ss_pred             cCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecH
Confidence            99999999985421 1          111221100            134688899999999998767777764

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-36  Score=264.84  Aligned_cols=272  Identities=23%  Similarity=0.343  Sum_probs=215.0

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      |||+++++++.    ++++ +.|.|+| .++||+|||.++++|++|.+.+....   ...+|.++|||++|+|+++|+++
T Consensus         1 Mka~~~~~~~~----~~~~-~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~---~~~~p~i~G~e~~G~V~~vG~~v   72 (347)
T PRK10309          1 MKSVVNDTDGI----VRVA-ESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG---AHYYPITLGHEFSGYVEAVGSGV   72 (347)
T ss_pred             CceEEEeCCCc----eEEE-ECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC---CCCCCcccccceEEEEEEeCCCC
Confidence            99999998775    5888 7888987 58999999999999999987542211   11357899999999999999999


Q ss_pred             CCCCCCCEEEEecCcc------------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           80 KKFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      ++|++||+|++.+...                  ...+...+|+|++|+.+|.+.++++|+++++++++.+. ++.++|+
T Consensus        73 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~  151 (347)
T PRK10309         73 DDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLH  151 (347)
T ss_pred             CCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHH
Confidence            9999999998864210                  00112247999999999999999999999998888763 4456888


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccccc---C--CCcc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED---L--PEKF  215 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~--~~~~  215 (284)
                      ++.....+++++|+|+| +|++|++++++|+.+ |++ ++++++++++.+.++++|++++++++......   .  ..++
T Consensus       152 ~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~  229 (347)
T PRK10309        152 AFHLAQGCEGKNVIIIG-AGTIGLLAIQCAVAL-GAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRF  229 (347)
T ss_pred             HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCC
Confidence            88778889999999998 799999999999996 886 67888899999999999999888876433211   1  3478


Q ss_pred             c-EEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCc-------------eeEE--Eec-----cHHHHHHHHHHHHCC
Q 023273          216 D-VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA-------------SSFV--LTS-----DGSILEKLNPYFESG  271 (284)
Q Consensus       216 d-~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~-------------~~~~--~~~-----~~~~~~~~~~~~~~g  271 (284)
                      | ++|||+|.   ...++++|+++|+++.+|.+..+..             +.+.  ...     ..++++++++++++|
T Consensus       230 d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g  309 (347)
T PRK10309        230 DQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTER  309 (347)
T ss_pred             CeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcC
Confidence            8 99999995   3789999999999999986542211             1111  111     147889999999999


Q ss_pred             Ce--eEeecccccC
Q 023273          272 KV--KAIIDPKGLL  283 (284)
Q Consensus       272 ~i--~~~i~~~~~~  283 (284)
                      ++  ++.|+++|||
T Consensus       310 ~i~~~~~i~~~~~l  323 (347)
T PRK10309        310 KLSLEPLIAHRGSF  323 (347)
T ss_pred             CCCchhheEEEeeH
Confidence            98  4779999986

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=7.9e-36  Score=265.79  Aligned_cols=275  Identities=30%  Similarity=0.428  Sum_probs=220.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCC-C--CC------CCCCCCcccccceeEE
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGA-F--SA------TDSPLPTIPGYDVAGV   71 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~-~--~~------~~~~~p~~~G~e~~G~   71 (284)
                      |||+++..++.    ++++ +.+.|+|+++||+||+.++++|++|++.+.+. +  +.      .....|.++|||++|+
T Consensus         1 mka~~~~~~~~----l~~~-~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~   75 (351)
T cd08233           1 MKAARYHGRKD----IRVE-EVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGV   75 (351)
T ss_pred             CceEEEecCCc----eEEE-eccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEE
Confidence            99999998765    6898 88999999999999999999999998876542 1  10      0123678999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEecCccc------------------cCCC-CCCCceeeEEeeecCceeeCCCCCCHHhhhcc
Q 023273           72 VEKVGSQVKKFKVGDEVYGDINEKA------------------LDHP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASL  132 (284)
Q Consensus        72 V~~vG~~~~~~~~Gd~V~~~~~~~~------------------~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~  132 (284)
                      |+++|+++++|++||+|++......                  ..+. ..+|+|++|+.++.+.++++|++++.++++.+
T Consensus        76 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~  155 (351)
T cd08233          76 VVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV  155 (351)
T ss_pred             EEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc
Confidence            9999999999999999987432110                  0001 12699999999999999999999998888765


Q ss_pred             cchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-
Q 023273          133 PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED-  210 (284)
Q Consensus       133 ~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-  210 (284)
                       .++.|||+++...++++|++|+|+| +|.+|++++++|+.+ |+ +++++++++++.+.++++|++.+++++..++.+ 
T Consensus       156 -~~~~ta~~~l~~~~~~~g~~vlI~g-~g~vG~~a~q~a~~~-G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~  232 (351)
T cd08233         156 -EPLAVAWHAVRRSGFKPGDTALVLG-AGPIGLLTILALKAA-GASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAE  232 (351)
T ss_pred             -cHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHH
Confidence             5778999999878899999999998 699999999999996 88 788888899999999999999888876544322 


Q ss_pred             ---C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCc----------eeEE--EeccHHHHHHHHHHHHC
Q 023273          211 ---L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA----------SSFV--LTSDGSILEKLNPYFES  270 (284)
Q Consensus       211 ---~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~----------~~~~--~~~~~~~~~~~~~~~~~  270 (284)
                         .  .+++|++||++|.   ...++++|+++|+++.+|....+..          .++.  .....++++++++++++
T Consensus       233 l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  312 (351)
T cd08233         233 VRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLAS  312 (351)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHc
Confidence               1  3469999999984   4789999999999999987642221          1111  12345789999999999


Q ss_pred             CCee--EeecccccC
Q 023273          271 GKVK--AIIDPKGLL  283 (284)
Q Consensus       271 g~i~--~~i~~~~~~  283 (284)
                      |+|+  +.|+++|||
T Consensus       313 g~l~~~~~i~~~~~l  327 (351)
T cd08233         313 GKIDAEPLITSRIPL  327 (351)
T ss_pred             CCCChHHheEEEecH
Confidence            9995  568888886

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=8.8e-36  Score=265.31  Aligned_cols=271  Identities=21%  Similarity=0.372  Sum_probs=215.8

Q ss_pred             EEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 023273            4 WVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK   83 (284)
Q Consensus         4 ~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   83 (284)
                      +++++++++   ++++ +.|.|+|+++||+|||.++++|++|++.+.+.+. ....+|.++|||++|+|+++|+++..+ 
T Consensus         2 ~~~~~~g~~---~~~~-~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~-~~~~~p~i~GhE~~G~V~~vG~~v~~~-   75 (349)
T TIGR03201         2 WMMTEPGKP---MVKT-RVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVR-TNHALPLALGHEISGRVIQAGAGAASW-   75 (349)
T ss_pred             ceEecCCCC---ceEE-eccCCCCCCCeEEEEEEEEeecccchHHHcCCCC-ccCCCCeeccccceEEEEEeCCCcCCC-
Confidence            456777765   6888 8899999999999999999999999998744321 123467899999999999999999877 


Q ss_pred             CCCEEEEecCcc------------------ccCCCCCCCceeeEEeeecCceeeCCC------CCCHHhhhcccchHHHH
Q 023273           84 VGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPK------NLSFVEAASLPLATETA  139 (284)
Q Consensus        84 ~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~------~~~~~~aa~~~~~~~ta  139 (284)
                      +||+|+..+...                  ...+...+|+|++|+++|.+.++++|+      ++++++++.+++++.|+
T Consensus        76 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta  155 (349)
T TIGR03201        76 IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTP  155 (349)
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHH
Confidence            999998742110                  011222469999999999999999999      89988888889999999


Q ss_pred             HHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc---ccc----C-
Q 023273          140 YEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IED----L-  211 (284)
Q Consensus       140 ~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~----~-  211 (284)
                      |+++...++++|++|+|+|+ |++|++++++|+.+ |+++++++++++|++.++++|++.++++...+   +.+    . 
T Consensus       156 ~~a~~~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~-G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t  233 (349)
T TIGR03201       156 YQAAVQAGLKKGDLVIVIGA-GGVGGYMVQTAKAM-GAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFA  233 (349)
T ss_pred             HHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhc
Confidence            99997788999999999996 99999999999996 88999999999999999999998888865432   111    1 


Q ss_pred             -CCccc----EEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee----------E--EEeccHHHHHHHHHHHHCC
Q 023273          212 -PEKFD----VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS----------F--VLTSDGSILEKLNPYFESG  271 (284)
Q Consensus       212 -~~~~d----~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~g  271 (284)
                       +.++|    ++|||+|+   ...++++++++|+++++|.+..+..++          +  ......++++++++++++|
T Consensus       234 ~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g  313 (349)
T TIGR03201       234 KARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDG  313 (349)
T ss_pred             ccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcC
Confidence             24675    89999996   367899999999999998764322211          1  1112457899999999999


Q ss_pred             CeeE--eecccccC
Q 023273          272 KVKA--IIDPKGLL  283 (284)
Q Consensus       272 ~i~~--~i~~~~~~  283 (284)
                      +|++  .++ +|||
T Consensus       314 ~i~~~~~i~-~~~l  326 (349)
T TIGR03201       314 KIQLGPFVE-RRPL  326 (349)
T ss_pred             CCCcccceE-EecH
Confidence            9865  565 6775

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=8.6e-36  Score=264.41  Aligned_cols=274  Identities=30%  Similarity=0.375  Sum_probs=207.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCc-ccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPT-IPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~-~~G~e~~G~V~~vG~~~   79 (284)
                      ||++++..++..   .+++ +.+.|.+.++||+|||.++|||+||++.+.|..+..+  .+. ++|||++|+|+++| .+
T Consensus         1 m~a~~~~~~~~~---~~~~-~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~--~~~~i~GHE~~G~V~evG-~~   73 (350)
T COG1063           1 MKAAVVYVGGGD---VRLE-EPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVP--PGDIILGHEFVGEVVEVG-VV   73 (350)
T ss_pred             CceeEEEecCCc---cccc-cCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCC--CCCcccCccceEEEEEec-cc
Confidence            888888877765   3466 6666678999999999999999999999998654332  333 89999999999999 77


Q ss_pred             CCCCCCCEEEEecCc--------------ccc---------CCCCCCCceeeEEeeecCceee-CCCCCCHHhhhcccch
Q 023273           80 KKFKVGDEVYGDINE--------------KAL---------DHPKRNGSLAEYTAVEENLLAL-KPKNLSFVEAASLPLA  135 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~--------------~~~---------~~~~~~g~~~~~~~~~~~~~~~-ip~~~~~~~aa~~~~~  135 (284)
                      +.+++||||+..+..              ...         .+...+|+|+||+++|.+.+++ +|+++ +.+.+++..+
T Consensus        74 ~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~ep  152 (350)
T COG1063          74 RGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEP  152 (350)
T ss_pred             cCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcCh
Confidence            889999999776421              000         0112579999999999765554 58887 5677788778


Q ss_pred             HHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeCCCcccc----
Q 023273          136 TETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIE----  209 (284)
Q Consensus       136 ~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~----  209 (284)
                      +.++|++. ......++++|+|+| +|++|++++++++..+..+|++++.+++|++++++ .+++.+++...++..    
T Consensus       153 la~~~~~~a~~~~~~~~~~V~V~G-aGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~  231 (350)
T COG1063         153 LATAYHGHAERAAVRPGGTVVVVG-AGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEIL  231 (350)
T ss_pred             hhhhhhhhhhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHH
Confidence            88998875 455555666999999 89999999999999744678888999999999998 556655555443211    


Q ss_pred             cC--CCcccEEEeCCCCc---HHHHHhhccCCEEEEEcCCCCCC-ce----------eEEE--e-ccHHHHHHHHHHHHC
Q 023273          210 DL--PEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTPP-AS----------SFVL--T-SDGSILEKLNPYFES  270 (284)
Q Consensus       210 ~~--~~~~d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~~~-~~----------~~~~--~-~~~~~~~~~~~~~~~  270 (284)
                      ..  +.++|++|||+|+.   .+++++++++|+++++|.+.... .+          ++..  . ....+++.+++++++
T Consensus       232 ~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~  311 (350)
T COG1063         232 ELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLAS  311 (350)
T ss_pred             HHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHc
Confidence            11  34799999999974   79999999999999999875442 12          1111  1 234689999999999


Q ss_pred             CCeeE--eecccccC
Q 023273          271 GKVKA--IIDPKGLL  283 (284)
Q Consensus       271 g~i~~--~i~~~~~~  283 (284)
                      |++++  +|+++++|
T Consensus       312 g~i~~~~lit~~~~~  326 (350)
T COG1063         312 GKIDPEKLITHRLPL  326 (350)
T ss_pred             CCCChhHceEeeccH
Confidence            99866  57888763

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=3.8e-35  Score=266.43  Aligned_cols=277  Identities=24%  Similarity=0.347  Sum_probs=210.6

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHH-cCCCC----CCCCCCCcccccceeEEEEEe
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM-LGAFS----ATDSPLPTIPGYDVAGVVEKV   75 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~-~g~~~----~~~~~~p~~~G~e~~G~V~~v   75 (284)
                      ||++++.+++.    ++++ +.|.|+|+++||+|||.++|+|++|++.+ .|...    ....++|.++|||++|+|+++
T Consensus         3 ~~a~~~~~~~~----l~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~v   77 (410)
T cd08238           3 TKAWRMYGKGD----LRLE-KFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKV   77 (410)
T ss_pred             cEEEEEEcCCc----eEEE-ecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEe
Confidence            78888888775    6898 88999999999999999999999999976 45421    111246889999999999999


Q ss_pred             CCCCC-CCCCCCEEEEecCccc-------cCCCCCCCceeeEEeeecC----ceeeCCCCCCHHhhhcc-cchH-HHHHH
Q 023273           76 GSQVK-KFKVGDEVYGDINEKA-------LDHPKRNGSLAEYTAVEEN----LLALKPKNLSFVEAASL-PLAT-ETAYE  141 (284)
Q Consensus        76 G~~~~-~~~~Gd~V~~~~~~~~-------~~~~~~~g~~~~~~~~~~~----~~~~ip~~~~~~~aa~~-~~~~-~ta~~  141 (284)
                      |++++ +|++||||++.+....       ..+...+|+|++|+++|.+    .++++|+++++++++.+ +.++ .+++.
T Consensus        78 G~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~  157 (410)
T cd08238          78 GKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYT  157 (410)
T ss_pred             CCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhh
Confidence            99998 6999999988632110       1122347999999999987    68999999999888765 4222 23444


Q ss_pred             HH---------HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC---eEEEEeCChhhHHHHHHc--------CCc-EE
Q 023273          142 GL---------ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA---SKVAATSSTAKLDLLRSL--------GAD-LA  200 (284)
Q Consensus       142 al---------~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~---~vi~~~~~~~~~~~~~~~--------g~~-~~  200 (284)
                      ++         ...++++|++|+|+|++|++|++++++|+.+ |.   +|++++.+++|++.++++        |++ .+
T Consensus       158 a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~-G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~  236 (410)
T cd08238         158 ANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHG-PIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLY  236 (410)
T ss_pred             hcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhc-ccCCceEEEEcCCHHHHHHHHHhccccccccCceEEE
Confidence            32         3467899999999998999999999999985 43   799999999999999987        655 45


Q ss_pred             eeCCC-ccccc----C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCC-C--CCcee----------E--EEe
Q 023273          201 IDYTK-ENIED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV-T--PPASS----------F--VLT  255 (284)
Q Consensus       201 ~~~~~-~~~~~----~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~-~--~~~~~----------~--~~~  255 (284)
                      ++++. +++.+    .  ++++|++||++|+   ...++++++++|+++.+++.. .  +..++          +  ...
T Consensus       237 i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~  316 (410)
T cd08238         237 VNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSG  316 (410)
T ss_pred             ECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCC
Confidence            66543 22221    1  3579999999985   478999999999988775431 1  11121          1  112


Q ss_pred             ccHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273          256 SDGSILEKLNPYFESGKVKA--IIDPKGLL  283 (284)
Q Consensus       256 ~~~~~~~~~~~~~~~g~i~~--~i~~~~~~  283 (284)
                      ....+++++++++++|++++  +|+++|||
T Consensus       317 ~~~~~~~~~~~li~~g~i~~~~~it~~~~l  346 (410)
T cd08238         317 GNTDDMKEAIDLMAAGKLNPARMVTHIGGL  346 (410)
T ss_pred             CCHHHHHHHHHHHHcCCCchhhcEEEEecH
Confidence            24678999999999999988  79999986

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.5e-34  Score=254.34  Aligned_cols=274  Identities=27%  Similarity=0.349  Sum_probs=224.1

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..++..   ++++ +.+.|++.++||+|++.++++|++|...+.|.++.  ...|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~p~~~g~e~~G~v~~vG~~v~   74 (333)
T cd08296           1 YKAVQVTEPGGP---LELV-ERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG--LSYPRVPGHEVVGRIDAVGEGVS   74 (333)
T ss_pred             CeEEEEccCCCC---ceEE-eccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC--CCCCcccCcceeEEEEEECCCCc
Confidence            999999988654   7898 88989999999999999999999999998886542  24578899999999999999999


Q ss_pred             CCCCCCEEEEec-----Cccc--------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           81 KFKVGDEVYGDI-----NEKA--------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        81 ~~~~Gd~V~~~~-----~~~~--------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      +|++||+|++.+     +++.              ..+....|+|++|+.++.+.++++|+++++.+++.+++++.|||+
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~  154 (333)
T cd08296          75 RWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFN  154 (333)
T ss_pred             cCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHH
Confidence            999999998732     1110              011223589999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC---CCcccEE
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL---PEKFDVV  218 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~d~v  218 (284)
                      ++...++.++++|+|+| +|.+|++++++|+.+ |.+++++++++++.+.++++|+++++++...++.+.   .+++|++
T Consensus       155 ~~~~~~~~~~~~vlV~g-~g~iG~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~d~v  232 (333)
T cd08296         155 ALRNSGAKPGDLVAVQG-IGGLGHLAVQYAAKM-GFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAKLI  232 (333)
T ss_pred             HHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCCCCEE
Confidence            99766899999999999 899999999999996 999999999999999999999988888765433221   2579999


Q ss_pred             EeCCCC---cHHHHHhhccCCEEEEEcCCCCCC----------ceeEEE--eccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          219 FDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL--TSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       219 id~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      ||++|.   ...++++++++|+++.+|......          +..+..  .....+++.++++++++.+++.+ ++||+
T Consensus       233 i~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~v-~~~~~  311 (333)
T cd08296         233 LATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMV-ETFPL  311 (333)
T ss_pred             EECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCceE-EEEEH
Confidence            999863   478999999999999998654221          111111  23457889999999999998876 46764

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=3.1e-34  Score=255.52  Aligned_cols=274  Identities=27%  Similarity=0.367  Sum_probs=221.0

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..++.    ++++ +.+.|.+.++||+|++.++++|++|++.+.+.++.  ...|.++|||++|+|+++|++++
T Consensus         1 mka~~~~~~~~----~~l~-~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~--~~~~~~~G~e~~G~V~~vG~~v~   73 (351)
T cd08285           1 MKAFAMLGIGK----VGWI-EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG--ERHGMILGHEAVGVVEEVGSEVK   73 (351)
T ss_pred             CceEEEccCCc----cEEE-ECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC--CCCCcccCcceEEEEEEecCCcC
Confidence            99999998886    4787 78888899999999999999999999988776532  34578999999999999999999


Q ss_pred             CCCCCCEEEEecC----cc-------c----------cCCCCCCCceeeEEeeecC--ceeeCCCCCCHHhhhcccchHH
Q 023273           81 KFKVGDEVYGDIN----EK-------A----------LDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLATE  137 (284)
Q Consensus        81 ~~~~Gd~V~~~~~----~~-------~----------~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~  137 (284)
                      ++++||+|++.+.    ++       .          ..+...+|+|++|+.++.+  .++++|+++++++++.++..+.
T Consensus        74 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~  153 (351)
T cd08285          74 DFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMS  153 (351)
T ss_pred             ccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchh
Confidence            9999999988431    00       0          0011136999999999874  8999999999999999999999


Q ss_pred             HHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C-
Q 023273          138 TAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L-  211 (284)
Q Consensus       138 ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~-  211 (284)
                      |||+++...+++++++|+|+| +|++|++++++|+.+ |. .++++++++++.+.++++|.+.+++++..++..    . 
T Consensus       154 ta~~~~~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~  231 (351)
T cd08285         154 TGFHGAELANIKLGDTVAVFG-IGPVGLMAVAGARLR-GAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLT  231 (351)
T ss_pred             hHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHh
Confidence            999998778899999999997 799999999999996 87 578888899999999999998888876543321    1 


Q ss_pred             -CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC--ce------------eEE--E-eccHHHHHHHHHHHHC
Q 023273          212 -PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP--AS------------SFV--L-TSDGSILEKLNPYFES  270 (284)
Q Consensus       212 -~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~--~~------------~~~--~-~~~~~~~~~~~~~~~~  270 (284)
                       ++++|++||++|+   ...++++|+++|+++.+|......  .+            .+.  . ....++++++++++++
T Consensus       232 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  311 (351)
T cd08285         232 GGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEY  311 (351)
T ss_pred             CCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHc
Confidence             3579999999985   378999999999999987654211  11            111  1 1235689999999999


Q ss_pred             CCeeE---eecccccC
Q 023273          271 GKVKA---IIDPKGLL  283 (284)
Q Consensus       271 g~i~~---~i~~~~~~  283 (284)
                      |+|++   .++++|||
T Consensus       312 g~i~~~~~~~~~~~~l  327 (351)
T cd08285         312 GRVDPSKLLTHHFFGF  327 (351)
T ss_pred             CCCChhhceeccccCH
Confidence            99988   56666765

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=4.8e-34  Score=255.23  Aligned_cols=274  Identities=27%  Similarity=0.367  Sum_probs=219.4

Q ss_pred             eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (284)
Q Consensus         2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   81 (284)
                      |++++.++++.   ++++ +.+.|+|+++||+|+|.++++|++|+....|.++.  ..+|.++|||++|+|+++|+++++
T Consensus         2 ka~~~~~~~~~---l~~~-~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~   75 (361)
T cd08231           2 RAAVLTGPGKP---LEIR-EVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR--VPLPIILGHEGVGRVVALGGGVTT   75 (361)
T ss_pred             eEEEEcCCCCC---CEEE-eccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC--CCCCcccccCCceEEEEeCCCccc
Confidence            78999988854   7998 88999999999999999999999999999887642  356789999999999999999986


Q ss_pred             ------CCCCCEEEEecC----ccc--------------cCC-------CCCCCceeeEEeeecC-ceeeCCCCCCHHhh
Q 023273           82 ------FKVGDEVYGDIN----EKA--------------LDH-------PKRNGSLAEYTAVEEN-LLALKPKNLSFVEA  129 (284)
Q Consensus        82 ------~~~Gd~V~~~~~----~~~--------------~~~-------~~~~g~~~~~~~~~~~-~~~~ip~~~~~~~a  129 (284)
                            |++||+|++.+.    ++.              ..+       ....|+|++|+.++.+ .++++|++++..++
T Consensus        76 ~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~a  155 (361)
T cd08231          76 DVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVA  155 (361)
T ss_pred             cccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHH
Confidence                  999999988731    110              000       1136999999999986 79999999998888


Q ss_pred             hcccchHHHHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCcc
Q 023273          130 ASLPLATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKEN  207 (284)
Q Consensus       130 a~~~~~~~ta~~al~~-~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~  207 (284)
                      +++++++.|||+++.. ....++++|||+| +|++|++++++|+.+ |+ +++++++++++.+.++++|.+.+++++...
T Consensus       156 a~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~  233 (361)
T cd08231         156 APANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLA-GARRVIVIDGSPERLELAREFGADATIDIDELP  233 (361)
T ss_pred             HHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccc
Confidence            8888999999999965 4455999999998 799999999999996 88 899999999999999999998888765433


Q ss_pred             cc-------cC--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC------------ceeEE--EeccHHHH
Q 023273          208 IE-------DL--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP------------ASSFV--LTSDGSIL  261 (284)
Q Consensus       208 ~~-------~~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~------------~~~~~--~~~~~~~~  261 (284)
                      ..       ..  .+++|++||++|+   ...++++++++|+++.+|......            .+.+.  .....+++
T Consensus       234 ~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (361)
T cd08231         234 DPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHL  313 (361)
T ss_pred             cHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhH
Confidence            21       11  3579999999985   478899999999999998653111            11111  11245678


Q ss_pred             HHHHHHHHCC--C--eeEeecccccC
Q 023273          262 EKLNPYFESG--K--VKAIIDPKGLL  283 (284)
Q Consensus       262 ~~~~~~~~~g--~--i~~~i~~~~~~  283 (284)
                      +++++++.++  .  ++++|+++|||
T Consensus       314 ~~~~~~~~~~~~~~~~~~~i~~~~~l  339 (361)
T cd08231         314 YRAVRFLERTQDRFPFAELVTHRYPL  339 (361)
T ss_pred             HHHHHHHHhccCcCCchhheeeeeeH
Confidence            8899998877  3  45678888875

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=6.2e-34  Score=253.26  Aligned_cols=280  Identities=31%  Similarity=0.433  Sum_probs=221.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC------------------CCCCCCc
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA------------------TDSPLPT   62 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~------------------~~~~~p~   62 (284)
                      ||++++..++.+ ..+.+.++.+.|+|.+++|+|+|.++++|++|++.+.|.++.                  .....|.
T Consensus         1 ~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~   79 (350)
T cd08274           1 MRAVLLTGHGGL-DKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPR   79 (350)
T ss_pred             CeEEEEeccCCc-cceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCc
Confidence            899999887765 446665234677789999999999999999999988776531                  1235678


Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEEEecCccc----------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcc
Q 023273           63 IPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKA----------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL  132 (284)
Q Consensus        63 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~----------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~  132 (284)
                      ++|||++|+|+++|+++++|++||+|++.+....          ..+...+|+|++|+.++.+.++++|+++++.+++++
T Consensus        80 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l  159 (350)
T cd08274          80 IQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATF  159 (350)
T ss_pred             ccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhc
Confidence            9999999999999999999999999988531110          011223599999999999999999999999999999


Q ss_pred             cchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc---
Q 023273          133 PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---  209 (284)
Q Consensus       133 ~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---  209 (284)
                      ++++.|||+++...++.++++|+|+|++|.+|++++++|+.+ |+++++++.++ +.+.++++|.+.+++.+.....   
T Consensus       160 ~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~-g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~  237 (350)
T cd08274         160 PCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRR-GAIVIAVAGAA-KEEAVRALGADTVILRDAPLLADAK  237 (350)
T ss_pred             ccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHHHH
Confidence            999999999997788999999999998899999999999996 99998888665 8888899998755554332211   


Q ss_pred             -cCCCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCCC-Cce----------eE--EEeccHHHHHHHHHHHHCCCe
Q 023273          210 -DLPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-PAS----------SF--VLTSDGSILEKLNPYFESGKV  273 (284)
Q Consensus       210 -~~~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~~-~~~----------~~--~~~~~~~~~~~~~~~~~~g~i  273 (284)
                       ...+++|++||++|+  ...++++|+++|+++.+|....+ ..+          .+  ........+.++++++.++++
T Consensus       238 ~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l  317 (350)
T cd08274         238 ALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTREVFRRLVRYIEEGEI  317 (350)
T ss_pred             hhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCHHHHHHHHHHHHCCCc
Confidence             124679999999985  58899999999999998754221 111          11  111246789999999999999


Q ss_pred             eEeecccccC
Q 023273          274 KAIIDPKGLL  283 (284)
Q Consensus       274 ~~~i~~~~~~  283 (284)
                      ++.+.++|++
T Consensus       318 ~~~~~~~~~~  327 (350)
T cd08274         318 RPVVAKTFPL  327 (350)
T ss_pred             ccccccccCH
Confidence            9888888774

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=6.7e-34  Score=252.14  Aligned_cols=255  Identities=29%  Similarity=0.384  Sum_probs=205.0

Q ss_pred             cceEEeccccC----CCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccce--eEEEEEeCCCCCCCCCCCE
Q 023273           14 SVLKFETNVEV----PSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDV--AGVVEKVGSQVKKFKVGDE   87 (284)
Q Consensus        14 ~~~~~~~~~~~----~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~--~G~V~~vG~~~~~~~~Gd~   87 (284)
                      ++++++ +.+.    |+|++|||+|||++++||+.|+..+.|..+. ....|.++|++.  .|.+..+|++++.|++||+
T Consensus        19 ~~~~~~-~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~-~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~   96 (338)
T cd08295          19 SDLELR-TTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS-LYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDL   96 (338)
T ss_pred             cceEEE-EecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc-ccCCCcCCCCeEeccEEEEEEecCCCCCCCCCE
Confidence            679998 7777    8899999999999999999999988885321 124577888754  4556567888889999999


Q ss_pred             EEEecCccccCCCCCCCceeeEEeeec-CceeeCC-CCCCHH-hhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchH
Q 023273           88 VYGDINEKALDHPKRNGSLAEYTAVEE-NLLALKP-KNLSFV-EAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGV  163 (284)
Q Consensus        88 V~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~ip-~~~~~~-~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~  163 (284)
                      |+++            |+|+||+++|. ..++++| +++++. +++++++++.|||+++ +..++++|++|+|+|++|++
T Consensus        97 V~~~------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~v  164 (338)
T cd08295          97 VWGF------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAV  164 (338)
T ss_pred             EEec------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHH
Confidence            9873            68999999999 7999995 678876 7888999999999999 56889999999999999999


Q ss_pred             HHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeCCCc-cccc-----CCCcccEEEeCCCC--cHHHHHhhcc
Q 023273          164 GTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKE-NIED-----LPEKFDVVFDAVGQ--CDKALKAVKE  234 (284)
Q Consensus       164 G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~-~~~~-----~~~~~d~vid~~g~--~~~~~~~l~~  234 (284)
                      |++++|+|+.+ |++++++++++++.+.+++ +|+++++++..+ ++.+     ..+++|++||++|+  ...++++|++
T Consensus       165 G~~aiqlAk~~-G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~  243 (338)
T cd08295         165 GQLVGQLAKLK-GCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNL  243 (338)
T ss_pred             HHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHHHHHhcc
Confidence            99999999995 9999999999999999998 999988886432 3221     13589999999985  5789999999


Q ss_pred             CCEEEEEcCCCCC-C-------c--------eeEE---Eecc----HHHHHHHHHHHHCCCeeEeecccccC
Q 023273          235 GGRVVSIIGSVTP-P-------A--------SSFV---LTSD----GSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       235 ~G~~v~~g~~~~~-~-------~--------~~~~---~~~~----~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +|+++.+|..... .       .        +++.   ....    .+.++++++++++|++++.+.++|||
T Consensus       244 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l  315 (338)
T cd08295         244 HGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGL  315 (338)
T ss_pred             CcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCH
Confidence            9999998754311 0       0        0111   1111    34578899999999999988777875

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=1.2e-33  Score=250.49  Aligned_cols=275  Identities=32%  Similarity=0.406  Sum_probs=222.6

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC-CCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      ||++++.+++.+   +++. +.+.|++.+++++|++.++++|++|+....|.++. .+..+|.++|+|++|+|+++|+++
T Consensus         1 ~ka~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v   76 (340)
T cd05284           1 MKAARLYEYGKP---LRLE-DVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGV   76 (340)
T ss_pred             CeeeEeccCCCC---ceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCC
Confidence            899999998765   7888 78888999999999999999999999998887643 234567899999999999999999


Q ss_pred             CCCCCCCEEEEecCc------------------cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           80 KKFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      ++|++||+|++....                  ....+...+|+|++|+.++.+.++++|+++++++++.+++.+.|||+
T Consensus        77 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~  156 (340)
T cd05284          77 DGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYH  156 (340)
T ss_pred             CcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence            999999999886421                  00112234689999999999999999999999999999999999999


Q ss_pred             HHHh--cccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--C
Q 023273          142 GLER--SAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--P  212 (284)
Q Consensus       142 al~~--~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~  212 (284)
                      ++..  ..+.++++|+|+| +|++|++++++|+.+ | .+++++++++++.+.++++|.+++++++.. +..    .  .
T Consensus       157 ~l~~~~~~~~~~~~vlI~g-~~~vg~~~~~~a~~~-g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~~~~  233 (340)
T cd05284         157 AVKKALPYLDPGSTVVVIG-VGGLGHIAVQILRAL-TPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEEVRELTGG  233 (340)
T ss_pred             HHHHhcccCCCCCEEEEEc-CcHHHHHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHHhCC
Confidence            9854  4688899999999 677999999999996 6 899999999999999999999888887654 221    1  3


Q ss_pred             CcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCC-C--------CceeEEE--eccHHHHHHHHHHHHCCCeeEeec
Q 023273          213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT-P--------PASSFVL--TSDGSILEKLNPYFESGKVKAIID  278 (284)
Q Consensus       213 ~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~-~--------~~~~~~~--~~~~~~~~~~~~~~~~g~i~~~i~  278 (284)
                      .++|+++|++|+   ...++++|+++|+++.+|.... +        .+..+..  ....+.++.+++++++|.+++.+ 
T Consensus       234 ~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~-  312 (340)
T cd05284         234 RGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHGRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVKVEI-  312 (340)
T ss_pred             CCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCCCccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCCcce-
Confidence            479999999985   4788999999999999975431 1        1222221  22467889999999999988644 


Q ss_pred             ccccC
Q 023273          279 PKGLL  283 (284)
Q Consensus       279 ~~~~~  283 (284)
                      ++|++
T Consensus       313 ~~~~~  317 (340)
T cd05284         313 TKFPL  317 (340)
T ss_pred             EEEeH
Confidence            45553

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=6.3e-34  Score=252.88  Aligned_cols=257  Identities=25%  Similarity=0.319  Sum_probs=199.8

Q ss_pred             cceEEeccccCCCCC-CCeEEEEEeEeecCHHHHHHHcCCCC-CCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEe
Q 023273           14 SVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFS-ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGD   91 (284)
Q Consensus        14 ~~~~~~~~~~~~~~~-~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~   91 (284)
                      +.++++ +.+.|+|. +|||+|||.++|||+.|......... ....++|.++|||++|+|+++|+++++|++||+|++.
T Consensus        21 ~~~~~~-~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~   99 (345)
T cd08293          21 ENFRVE-ECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF   99 (345)
T ss_pred             cceEEE-eccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence            458888 88999875 99999999999999999643322110 1123467889999999999999999999999999874


Q ss_pred             cCccccCCCCCCCceeeEEeeecCceeeCCCCCCHH----hhhcccchHHHHHHHH-HhcccCCC--CEEEEEcCCchHH
Q 023273           92 INEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFV----EAASLPLATETAYEGL-ERSAFSAG--KSILVLGGAGGVG  164 (284)
Q Consensus        92 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~----~aa~~~~~~~ta~~al-~~~~~~~g--~~vlI~ga~g~~G  164 (284)
                      .           ++|++|++++.+.++++|+++++.    .+++++.++.|||+++ +.+++++|  ++|+|+|++|++|
T Consensus       100 ~-----------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG  168 (345)
T cd08293         100 N-----------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACG  168 (345)
T ss_pred             C-----------CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHH
Confidence            1           579999999999999999985332    2456678899999998 56778776  9999999999999


Q ss_pred             HHHHHHHHHhcCC-eEEEEeCChhhHHHHHH-cCCcEEeeCCCccccc-----CCCcccEEEeCCCC--cHHHHHhhccC
Q 023273          165 TMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-LGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--CDKALKAVKEG  235 (284)
Q Consensus       165 ~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g~--~~~~~~~l~~~  235 (284)
                      ++++|+|+++ |+ +|+++++++++.+.+++ +|++++++++..++.+     ..+++|++||++|+  ...++++|+++
T Consensus       169 ~~aiqlAk~~-G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~  247 (345)
T cd08293         169 SLAGQIGRLL-GCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNEN  247 (345)
T ss_pred             HHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccC
Confidence            9999999996 88 79999999999998876 9999999886544332     13589999999986  47899999999


Q ss_pred             CEEEEEcCCC---C-----C------------CceeEEE---ecc----HHHHHHHHHHHHCCCeeEeecccccC
Q 023273          236 GRVVSIIGSV---T-----P------------PASSFVL---TSD----GSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       236 G~~v~~g~~~---~-----~------------~~~~~~~---~~~----~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      |+++.+|...   .     +            ..+.+..   ...    .+.++++++++++|.+++.+..++||
T Consensus       248 G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l  322 (345)
T cd08293         248 SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGL  322 (345)
T ss_pred             CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccceeEEeecH
Confidence            9999987421   0     0            1111111   111    34578888999999998875555553

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=1e-33  Score=250.98  Aligned_cols=274  Identities=22%  Similarity=0.280  Sum_probs=217.1

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++.    ++++ +.+.|+|+++|++|++.++++|++|++.+.|.++.  .++|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~----~~~~-~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~   73 (339)
T PRK10083          1 MKSIVIEKPNS----LAIE-ERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF--AKYPRVIGHEFFGVIDAVGEGVD   73 (339)
T ss_pred             CeEEEEecCCe----eEEE-eccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc--CCCCcccccceEEEEEEECCCCc
Confidence            99999998775    6888 88999999999999999999999999998887542  24688999999999999999999


Q ss_pred             CCCCCCEEEEecCccc-------cC-----------CCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273           81 KFKVGDEVYGDINEKA-------LD-----------HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~-------~~-----------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (284)
                      .+++||+|+..+....       ..           ....+|+|++|++++.+.++++|+++++++++ +..++.+++++
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~  152 (339)
T PRK10083         74 AARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV  152 (339)
T ss_pred             cCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH
Confidence            9999999985321100       00           11236899999999999999999999987765 55667788876


Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCcccccC----CCcccE
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----PEKFDV  217 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~d~  217 (284)
                      +...++++|++|+|+| +|++|++++++|+.+.|++ +++++++++|.+.++++|++.+++++...+...    +.++|+
T Consensus       153 ~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~  231 (339)
T PRK10083        153 TGRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPTL  231 (339)
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCCE
Confidence            6788999999999999 7999999999999623775 666778899999999999998988765432221    224679


Q ss_pred             EEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCc----------eeEEE-eccHHHHHHHHHHHHCCCeeE--eecccc
Q 023273          218 VFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA----------SSFVL-TSDGSILEKLNPYFESGKVKA--IIDPKG  281 (284)
Q Consensus       218 vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~----------~~~~~-~~~~~~~~~~~~~~~~g~i~~--~i~~~~  281 (284)
                      +||++|.   ...++++|+++|+++.+|....+..          +.+.. ....+.++++++++++|.+++  .++++|
T Consensus       232 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~  311 (339)
T PRK10083        232 IIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHTF  311 (339)
T ss_pred             EEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeeee
Confidence            9999984   4889999999999999986532211          11111 123578999999999999987  477888


Q ss_pred             cC
Q 023273          282 LL  283 (284)
Q Consensus       282 ~~  283 (284)
                      |+
T Consensus       312 ~l  313 (339)
T PRK10083        312 DF  313 (339)
T ss_pred             cH
Confidence            75

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-33  Score=248.64  Aligned_cols=255  Identities=29%  Similarity=0.386  Sum_probs=202.1

Q ss_pred             cceEEecc--ccCC-CCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCccccc--ceeEEEEEeCCCCCCCCCCCEE
Q 023273           14 SVLKFETN--VEVP-SLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGY--DVAGVVEKVGSQVKKFKVGDEV   88 (284)
Q Consensus        14 ~~~~~~~~--~~~~-~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~--e~~G~V~~vG~~~~~~~~Gd~V   88 (284)
                      ++|++.+.  .+.| ++++|||+||+.++++|+.|...+.+..+  ...+|.++|+  |++|+|..+|+++++|++||+|
T Consensus        25 ~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~--~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V  102 (348)
T PLN03154         25 TDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD--SYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLI  102 (348)
T ss_pred             ccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC--CCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEE
Confidence            46888821  3454 35899999999999999998765433221  1135788997  8899999999999999999999


Q ss_pred             EEecCccccCCCCCCCceeeEEeeecCc--eee--CCCCCCHH-hhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCch
Q 023273           89 YGDINEKALDHPKRNGSLAEYTAVEENL--LAL--KPKNLSFV-EAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGG  162 (284)
Q Consensus        89 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~--ip~~~~~~-~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~  162 (284)
                      ++            .|+|++|.+++.+.  +++  +|++++++ +++++++++.|||+++ ...++++|++|+|+|++|+
T Consensus       103 ~~------------~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~  170 (348)
T PLN03154        103 SG------------ITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGA  170 (348)
T ss_pred             Ee------------cCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccH
Confidence            87            36899999998753  544  58999886 6778899999999998 5688999999999998899


Q ss_pred             HHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEeeCCCc-cccc-----CCCcccEEEeCCCC--cHHHHHhhc
Q 023273          163 VGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKE-NIED-----LPEKFDVVFDAVGQ--CDKALKAVK  233 (284)
Q Consensus       163 ~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~-----~~~~~d~vid~~g~--~~~~~~~l~  233 (284)
                      +|++++|+|+.+ |+++++++++++|.+.++ ++|++.+++++.. ++.+     ..+++|++||++|+  ...++++++
T Consensus       171 vG~~aiqlAk~~-G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~  249 (348)
T PLN03154        171 VGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMK  249 (348)
T ss_pred             HHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhc
Confidence            999999999996 999999999999999987 7999999987642 3322     14579999999985  578999999


Q ss_pred             cCCEEEEEcCCCCCC--------c--------eeEEE--ec-----cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          234 EGGRVVSIIGSVTPP--------A--------SSFVL--TS-----DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       234 ~~G~~v~~g~~~~~~--------~--------~~~~~--~~-----~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      ++|+++.+|......        .        +.+..  ..     ..+.++++++++++|+|++.++++|||
T Consensus       250 ~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L  322 (348)
T PLN03154        250 IHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGL  322 (348)
T ss_pred             cCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCH
Confidence            999999998653110        0        11111  00     135688899999999999999888886

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=2.7e-33  Score=247.01  Aligned_cols=261  Identities=28%  Similarity=0.355  Sum_probs=207.9

Q ss_pred             CeEEEEccc--CCC-ccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCC
Q 023273            1 MKAWVYKEY--GNS-QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS   77 (284)
Q Consensus         1 m~a~~~~~~--g~~-~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   77 (284)
                      ||++++..+  |.+ .+.++++ +.+.|+|++|||+|||.++++|+.|.....+     ..+.|.++|+|++|+|++   
T Consensus         3 ~~~~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlVkv~a~~in~~~~~~~~~-----~~~~p~v~G~e~~G~V~~---   73 (329)
T cd08294           3 AKTWVLKKHFDGKPKESDFELV-EEELPPLKDGEVLCEALFLSVDPYMRPYSKR-----LNEGDTMIGTQVAKVIES---   73 (329)
T ss_pred             ceEEEEecCCCCCCCccceEEE-ecCCCCCCCCcEEEEEEEEecCHHHhccccc-----CCCCCcEecceEEEEEec---
Confidence            899999983  443 2568998 8899999999999999999999987542211     124578999999999984   


Q ss_pred             CCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecC---ceeeCCCCCC-----HHhhhcccchHHHHHHHH-Hhccc
Q 023273           78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEEN---LLALKPKNLS-----FVEAASLPLATETAYEGL-ERSAF  148 (284)
Q Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~ip~~~~-----~~~aa~~~~~~~ta~~al-~~~~~  148 (284)
                      .+++|++||||++.            ++|++|++++.+   .++++|++++     ....++++++++|||+++ ...++
T Consensus        74 ~~~~~~~Gd~V~~~------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~  141 (329)
T cd08294          74 KNSKFPVGTIVVAS------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKP  141 (329)
T ss_pred             CCCCCCCCCEEEee------------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCC
Confidence            45679999999873            478999999999   9999999987     233346788999999998 57889


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-----CCCcccEEEeCCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVG  223 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g  223 (284)
                      ++|++|+|+|++|++|.+++++|+.+ |++++++++++++.+.++++|++++++++..++.+     ..+++|++||++|
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~-G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g  220 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIK-GCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVG  220 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence            99999999999999999999999995 99999999999999999999999999887554332     1467999999998


Q ss_pred             C--cHHHHHhhccCCEEEEEcCCCC---C-----C---------ceeEEE---ec----cHHHHHHHHHHHHCCCeeEee
Q 023273          224 Q--CDKALKAVKEGGRVVSIIGSVT---P-----P---------ASSFVL---TS----DGSILEKLNPYFESGKVKAII  277 (284)
Q Consensus       224 ~--~~~~~~~l~~~G~~v~~g~~~~---~-----~---------~~~~~~---~~----~~~~~~~~~~~~~~g~i~~~i  277 (284)
                      +  ...++++++++|+++.+|....   +     .         .+++..   ..    ..+.++++++++++|.+++.+
T Consensus       221 ~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~  300 (329)
T cd08294         221 GEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYRE  300 (329)
T ss_pred             HHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCc
Confidence            6  4789999999999999874211   0     0         011111   01    124577899999999998876


Q ss_pred             cccccC
Q 023273          278 DPKGLL  283 (284)
Q Consensus       278 ~~~~~~  283 (284)
                      ..+|||
T Consensus       301 ~~~~~l  306 (329)
T cd08294         301 HVTEGF  306 (329)
T ss_pred             ccccCH
Confidence            666764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=3.3e-33  Score=247.26  Aligned_cols=271  Identities=32%  Similarity=0.474  Sum_probs=220.1

Q ss_pred             eEEEEccc---CCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCC
Q 023273            2 KAWVYKEY---GNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ   78 (284)
Q Consensus         2 ~a~~~~~~---g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~   78 (284)
                      ||+++..+   +.+ +.+++. +.|.|+|+++||+|++.++++|++|...+.|..+  ...+|.++|+|++|+|+++|++
T Consensus         1 ~~~~~~~~~~~~~~-~~~~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~--~~~~~~~~g~e~~G~V~~vG~~   76 (336)
T TIGR02817         1 KAVGYKKPLPITDP-DALVDI-DLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP--EAGQPKILGWDAAGVVVAVGDE   76 (336)
T ss_pred             CceeeccccCCCCc-ccceec-ccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC--CCCCCcccceeeEEEEEEeCCC
Confidence            67888887   665 668888 7899999999999999999999999988877543  2345778999999999999999


Q ss_pred             CCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCC-----CC
Q 023273           79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSA-----GK  152 (284)
Q Consensus        79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~-----g~  152 (284)
                      ++.|++||+|++...      ....|+|++|+.++.+.++++|+++++++++.+++++.|||+++ ...++.+     |+
T Consensus        77 v~~~~~Gd~V~~~~~------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~  150 (336)
T TIGR02817        77 VTLFKPGDEVWYAGD------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKR  150 (336)
T ss_pred             CCCCCCCCEEEEcCC------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence            999999999988531      12258999999999999999999999999999999999999998 5677776     99


Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C-CCcccEEEeCCCC---
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L-PEKFDVVFDAVGQ---  224 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~-~~~~d~vid~~g~---  224 (284)
                      +|+|+|++|.+|++++++|+.+.|+++++++.++++.+.++++|.+++++++. .+..    . .+++|+++|++++   
T Consensus       151 ~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~~~~~vd~vl~~~~~~~~  229 (336)
T TIGR02817       151 ALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKLGLEAVSYVFSLTHTDQH  229 (336)
T ss_pred             EEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHhcCCCCCEEEEcCCcHHH
Confidence            99999999999999999999833899999999999999999999988887543 2211    1 3579999999753   


Q ss_pred             cHHHHHhhccCCEEEEEcCCCC------C-CceeEE---Ee--c---------cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          225 CDKALKAVKEGGRVVSIIGSVT------P-PASSFV---LT--S---------DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       225 ~~~~~~~l~~~G~~v~~g~~~~------~-~~~~~~---~~--~---------~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      ...++++++++|+++.++....      . ....+.   +.  .         ..+.++++++++.+|.+++.+++++++
T Consensus       230 ~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~  309 (336)
T TIGR02817       230 FKEIVELLAPQGRFALIDDPAELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGT  309 (336)
T ss_pred             HHHHHHHhccCCEEEEEcccccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCC
Confidence            5889999999999998864321      0 112111   11  0         014688899999999999887777653

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=9.8e-33  Score=244.48  Aligned_cols=274  Identities=27%  Similarity=0.341  Sum_probs=217.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++++++..   ..++ +.|.|+|.++|++|++.++++|++|++.+.|.++.   ..|.++|||++|+|+++|+++.
T Consensus         1 mka~~~~~~~~~---~~~~-~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~~G~~v~   73 (338)
T PRK09422          1 MKAAVVNKDHTG---DVVV-EKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD---KTGRILGHEGIGIVKEVGPGVT   73 (338)
T ss_pred             CeEEEecCCCCC---ceEE-EecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC---CCCccCCcccceEEEEECCCCc
Confidence            999999998876   3377 78999999999999999999999999998886532   2367899999999999999999


Q ss_pred             CCCCCCEEEEecC-----c--------------cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           81 KFKVGDEVYGDIN-----E--------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        81 ~~~~Gd~V~~~~~-----~--------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      .|++||+|++.+.     .              ....+...+|+|++|+.++.+.++++|+++++.+++.+++.+.|||+
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~  153 (338)
T PRK09422         74 SLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYK  153 (338)
T ss_pred             cCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHH
Confidence            9999999987211     0              00011223699999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC-cccc----cCCCccc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIE----DLPEKFD  216 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~----~~~~~~d  216 (284)
                      ++...++++|++|+|+| +|++|++++++|+.+.|.+++++++++++.+.++++|.+.+++++. ..+.    ...+++|
T Consensus       154 ~~~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~~~d  232 (338)
T PRK09422        154 AIKVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGAH  232 (338)
T ss_pred             HHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcCCCc
Confidence            99878899999999999 7999999999999733889999999999999999999988888743 2211    1234789


Q ss_pred             EEEeCCC-C--cHHHHHhhccCCEEEEEcCCCCCCc----------eeEE--EeccHHHHHHHHHHHHCCCeeEeecccc
Q 023273          217 VVFDAVG-Q--CDKALKAVKEGGRVVSIIGSVTPPA----------SSFV--LTSDGSILEKLNPYFESGKVKAIIDPKG  281 (284)
Q Consensus       217 ~vid~~g-~--~~~~~~~l~~~G~~v~~g~~~~~~~----------~~~~--~~~~~~~~~~~~~~~~~g~i~~~i~~~~  281 (284)
                      +++.+.+ .  ...++++++++|+++.+|.......          ..+.  .....++++++++++++|.+.+.+++ +
T Consensus       233 ~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~v~~-~  311 (338)
T PRK09422        233 AAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPKVQL-R  311 (338)
T ss_pred             EEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCccEEE-E
Confidence            5554443 3  5889999999999999986532111          1111  11246789999999999998776653 4


Q ss_pred             cC
Q 023273          282 LL  283 (284)
Q Consensus       282 ~~  283 (284)
                      ++
T Consensus       312 ~~  313 (338)
T PRK09422        312 PL  313 (338)
T ss_pred             cH
Confidence            43

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=4.7e-33  Score=245.40  Aligned_cols=248  Identities=27%  Similarity=0.363  Sum_probs=201.0

Q ss_pred             cceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEecC
Q 023273           14 SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN   93 (284)
Q Consensus        14 ~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~   93 (284)
                      +.++++ +.+.|+|++|||+|||.++++|+.+.   .|.++.  ...|.++|.|++|+|+++|+   .|++||||+++  
T Consensus        17 ~~l~~~-~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~--~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~--   85 (325)
T TIGR02825        17 SDFELK-TVELPPLNNGEVLLEALFLSVDPYMR---VAAKRL--KEGDTMMGQQVARVVESKNV---ALPKGTIVLAS--   85 (325)
T ss_pred             CceEEE-eccCCCCCCCcEEEEEEEEecCHHHh---cccCcC--CCCCcEecceEEEEEEeCCC---CCCCCCEEEEe--
Confidence            568888 78999999999999999999999654   343321  13467999999999999774   59999999884  


Q ss_pred             ccccCCCCCCCceeeEEeeecCceeeC----CCCCCHHhh-hcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHH
Q 023273           94 EKALDHPKRNGSLAEYTAVEENLLALK----PKNLSFVEA-ASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMV  167 (284)
Q Consensus        94 ~~~~~~~~~~g~~~~~~~~~~~~~~~i----p~~~~~~~a-a~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a  167 (284)
                                ++|++|++++.+.+.++    |++++++++ +++++++.|||+++ +..++++|++|+|+|++|++|+++
T Consensus        86 ----------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~a  155 (325)
T TIGR02825        86 ----------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVV  155 (325)
T ss_pred             ----------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHH
Confidence                      36899999999888777    899999887 67899999999998 678999999999999999999999


Q ss_pred             HHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCc-cccc-----CCCcccEEEeCCCC--cHHHHHhhccCCEEE
Q 023273          168 IQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE-NIED-----LPEKFDVVFDAVGQ--CDKALKAVKEGGRVV  239 (284)
Q Consensus       168 ~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~-----~~~~~d~vid~~g~--~~~~~~~l~~~G~~v  239 (284)
                      +|+|+.. |++++++++++++.+.++++|++.+++++.. .+.+     .++++|++||++|+  ...++++++++|+++
T Consensus       156 iqlAk~~-G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv  234 (325)
T TIGR02825       156 GQIAKLK-GCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIA  234 (325)
T ss_pred             HHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEE
Confidence            9999995 9999999999999999999999999987653 3322     13579999999985  488999999999999


Q ss_pred             EEcCCCC-------CC----------ceeEEE-e--c-----cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          240 SIIGSVT-------PP----------ASSFVL-T--S-----DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       240 ~~g~~~~-------~~----------~~~~~~-~--~-----~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      .+|....       +.          .+++.. .  .     ..+.++++++++++|++++.+..+|||
T Consensus       235 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l  303 (325)
T TIGR02825       235 ICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGF  303 (325)
T ss_pred             EecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccH
Confidence            9875321       10          011111 0  1     135788999999999999887777775

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.7e-32  Score=243.37  Aligned_cols=276  Identities=29%  Similarity=0.399  Sum_probs=223.0

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..++ . ..++++ +.+.|.|.++|++|++.++++|++|...+.|.++.. .+.|..+|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~-~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~V~~vG~~~~   76 (341)
T cd08297           1 MKAAVVEEFG-E-KPYEVK-DVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVK-PKLPLIGGHEGAGVVVAVGPGVS   76 (341)
T ss_pred             CceEEeeccC-C-CCceEE-EeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcC-CCCCccCCcccceEEEEeCCCCC
Confidence            9999999887 2 347888 888899999999999999999999999888876422 34466789999999999999999


Q ss_pred             CCCCCCEEEEec-----Ccc--------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           81 KFKVGDEVYGDI-----NEK--------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        81 ~~~~Gd~V~~~~-----~~~--------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      .+++||+|++.+     +.+              ...+....|+|++|+.++.+.++++|+++++.+++.++..+.|||+
T Consensus        77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~  156 (341)
T cd08297          77 GLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYK  156 (341)
T ss_pred             CCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHH
Confidence            999999998752     100              0011123689999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKF  215 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~  215 (284)
                      ++...+++++++|+|+|+++.+|++++++|+++ |.+++++++++++.+.++++|.+.+++++..++.+    .  .+++
T Consensus       157 ~~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~v  235 (341)
T cd08297         157 ALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAM-GLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGA  235 (341)
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCC
Confidence            997678999999999998888999999999996 99999999999999999999988888876543222    1  4679


Q ss_pred             cEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC-c----------eeEEE--eccHHHHHHHHHHHHCCCeeEeecc
Q 023273          216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-A----------SSFVL--TSDGSILEKLNPYFESGKVKAIIDP  279 (284)
Q Consensus       216 d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-~----------~~~~~--~~~~~~~~~~~~~~~~g~i~~~i~~  279 (284)
                      |++||+.++   ...++++++++|+++.+|...... .          ..+..  ....+++++++++++++.+++.+ +
T Consensus       236 d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~  314 (341)
T cd08297         236 HAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVKPHI-Q  314 (341)
T ss_pred             CEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCccee-E
Confidence            999997763   478899999999999998653211 1          11111  12368899999999999988755 4


Q ss_pred             ccc
Q 023273          280 KGL  282 (284)
Q Consensus       280 ~~~  282 (284)
                      +|+
T Consensus       315 ~~~  317 (341)
T cd08297         315 VVP  317 (341)
T ss_pred             EEc
Confidence            454

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=3.2e-33  Score=250.28  Aligned_cols=274  Identities=26%  Similarity=0.330  Sum_probs=218.4

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++..   ++++ +.+.|++.++||+|++.++++|++|++...|.++   ...|.++|||++|+|+++|+++.
T Consensus         3 ~~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~---~~~p~v~G~e~~G~V~~vG~~v~   75 (365)
T cd08278           3 TTAAVVREPGGP---FVLE-DVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP---TPLPAVLGHEGAGVVEAVGSAVT   75 (365)
T ss_pred             cEEeeeccCCCc---ceEE-EeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC---CCCCcccccceeEEEEEeCCCcc
Confidence            899999987765   7888 7888999999999999999999999999988764   23578899999999999999999


Q ss_pred             CCCCCCEEEEecCccc------cC--------------C--------------------CCCCCceeeEEeeecCceeeC
Q 023273           81 KFKVGDEVYGDINEKA------LD--------------H--------------------PKRNGSLAEYTAVEENLLALK  120 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~------~~--------------~--------------------~~~~g~~~~~~~~~~~~~~~i  120 (284)
                      +|++||+|++....+.      ..              +                    ....|+|++|+.++.+.++++
T Consensus        76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~i  155 (365)
T cd08278          76 GLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKV  155 (365)
T ss_pred             cCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEEC
Confidence            9999999986321000      00              0                    112589999999999999999


Q ss_pred             CCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCc
Q 023273          121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD  198 (284)
Q Consensus       121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~  198 (284)
                      |++++.++++.+++++.||+.++ ....++++++|+|+| +|.+|++++++|+++ |. .+++++.+++|.+.++++|++
T Consensus       156 P~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~-G~~~v~~~~~~~~k~~~~~~~g~~  233 (365)
T cd08278         156 DKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIA-GCTTIIAVDIVDSRLELAKELGAT  233 (365)
T ss_pred             CCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCc
Confidence            99999999999999999999987 567889999999997 699999999999996 88 588888899999999999998


Q ss_pred             EEeeCCCccccc-----CCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCC--C----------CceeEEEe---
Q 023273          199 LAIDYTKENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT--P----------PASSFVLT---  255 (284)
Q Consensus       199 ~~~~~~~~~~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~--~----------~~~~~~~~---  255 (284)
                      .+++++...+.+     ..+++|+++||+|+   ...++++++++|+++.+|....  .          ....+...   
T Consensus       234 ~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (365)
T cd08278         234 HVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEG  313 (365)
T ss_pred             EEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecC
Confidence            888876543221     14689999999984   4889999999999999986521  1          11122111   


Q ss_pred             --ccHHHHHHHHHHHHCCCeeE-eecccccC
Q 023273          256 --SDGSILEKLNPYFESGKVKA-IIDPKGLL  283 (284)
Q Consensus       256 --~~~~~~~~~~~~~~~g~i~~-~i~~~~~~  283 (284)
                        ...+.++++++++++|.+++ .+.+.|||
T Consensus       314 ~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~l  344 (365)
T cd08278         314 DSVPQEFIPRLIELYRQGKFPFDKLVTFYPF  344 (365)
T ss_pred             CcChHHHHHHHHHHHHcCCCChHHheEEecH
Confidence              11456788999999999854 23345553

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=7.3e-33  Score=245.59  Aligned_cols=271  Identities=28%  Similarity=0.382  Sum_probs=219.1

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCC-CeEEEEEeEeecCHHHHHHHcCCCCCCCC---CCCcccccceeEEEEEeC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLRE-DQVLIKVVAAALNPIDFKRMLGAFSATDS---PLPTIPGYDVAGVVEKVG   76 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~-~ev~V~v~~~~i~~~d~~~~~g~~~~~~~---~~p~~~G~e~~G~V~~vG   76 (284)
                      |||+++..++.+.+.+.++ +.|.|+|.+ +||+|++.++++|++|...+.|.++....   ..|.++|||++|+|+++|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG   79 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLE-SYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVG   79 (341)
T ss_pred             CceEEEccCCCchhheEEe-ecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeC
Confidence            9999999998764457888 788888887 99999999999999999998886542211   156789999999999999


Q ss_pred             CCCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEE
Q 023273           77 SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSIL  155 (284)
Q Consensus        77 ~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vl  155 (284)
                      ++++.|++||+|++...        ..|+|++|+.++.+.++++|+++++++++.+++.+.|||+++. ..++.++++|+
T Consensus        80 ~~v~~~~~Gd~V~~~~~--------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl  151 (341)
T cd08290          80 SGVKSLKPGDWVIPLRP--------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVI  151 (341)
T ss_pred             CCCCCCCCCCEEEecCC--------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEE
Confidence            99999999999998642        2589999999999999999999999999999999999999984 57889999999


Q ss_pred             EEcCCchHHHHHHHHHHHhcCCeEEEEeCCh----hhHHHHHHcCCcEEeeCCCc---cccc-----CCCcccEEEeCCC
Q 023273          156 VLGGAGGVGTMVIQLAKHVFGASKVAATSST----AKLDLLRSLGADLAIDYTKE---NIED-----LPEKFDVVFDAVG  223 (284)
Q Consensus       156 I~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~----~~~~~~~~~g~~~~~~~~~~---~~~~-----~~~~~d~vid~~g  223 (284)
                      |+|++|++|++++++|++. |.+++++..++    ++.+.++++|.+.+++++..   .+..     ..+++|++|||+|
T Consensus       152 I~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g  230 (341)
T cd08290         152 QNGANSAVGQAVIQLAKLL-GIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVG  230 (341)
T ss_pred             EccchhHHHHHHHHHHHHc-CCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcC
Confidence            9998999999999999996 99998888765    66788888999888876543   2211     1227999999998


Q ss_pred             C--cHHHHHhhccCCEEEEEcCCCC-C----------CceeEEEec--------c----HHHHHHHHHHHHCCCeeEeec
Q 023273          224 Q--CDKALKAVKEGGRVVSIIGSVT-P----------PASSFVLTS--------D----GSILEKLNPYFESGKVKAIID  278 (284)
Q Consensus       224 ~--~~~~~~~l~~~G~~v~~g~~~~-~----------~~~~~~~~~--------~----~~~~~~~~~~~~~g~i~~~i~  278 (284)
                      +  ....+++++++|+++.+|.... +          ....+....        .    ...++++++++.+|.+++.+.
T Consensus       231 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  310 (341)
T cd08290         231 GKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPV  310 (341)
T ss_pred             cHhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcc
Confidence            6  4678899999999999985421 1          111111110        0    125888999999999988766


Q ss_pred             ccc
Q 023273          279 PKG  281 (284)
Q Consensus       279 ~~~  281 (284)
                      +++
T Consensus       311 ~~~  313 (341)
T cd08290         311 EKV  313 (341)
T ss_pred             ccc
Confidence            555

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=8.4e-33  Score=246.20  Aligned_cols=277  Identities=26%  Similarity=0.334  Sum_probs=221.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC----------CCCCCCcccccceeE
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA----------TDSPLPTIPGYDVAG   70 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~----------~~~~~p~~~G~e~~G   70 (284)
                      |||+++..++.+   ++++ +.|.|++.++||+|++.++++|++|++.+.|.++.          ...+.|.++|||++|
T Consensus         1 ~~a~~~~~~~~~---~~~~-~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G   76 (350)
T cd08240           1 MKAAAVVEPGKP---LEEV-EIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVG   76 (350)
T ss_pred             CeeEEeccCCCC---ceEE-ecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeE
Confidence            999999988876   7888 88999999999999999999999999998876531          122346789999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEecCcccc------------------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcc
Q 023273           71 VVEKVGSQVKKFKVGDEVYGDINEKAL------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL  132 (284)
Q Consensus        71 ~V~~vG~~~~~~~~Gd~V~~~~~~~~~------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~  132 (284)
                      +|+++|++++++++||+|++++.....                  .+....|+|++|+.++.+.++++|+++++.+++.+
T Consensus        77 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l  156 (350)
T cd08240          77 EVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATL  156 (350)
T ss_pred             EEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehh
Confidence            999999999999999999886311000                  00114689999999999999999999999999999


Q ss_pred             cchHHHHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc
Q 023273          133 PLATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED  210 (284)
Q Consensus       133 ~~~~~ta~~al~~-~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  210 (284)
                      .+.+.|||+++.. ....++++|+|+| +|.+|++++++|+.+ |+ ++++++.++++.+.++++|.+.+++.+...+..
T Consensus       157 ~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  234 (350)
T cd08240         157 ACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKAL-GPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAK  234 (350)
T ss_pred             hchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHH
Confidence            9999999999954 4556899999996 799999999999996 88 688888899999999999988888765433221


Q ss_pred             -----CCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC----------ceeEE--EeccHHHHHHHHHHHHC
Q 023273          211 -----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFV--LTSDGSILEKLNPYFES  270 (284)
Q Consensus       211 -----~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~--~~~~~~~~~~~~~~~~~  270 (284)
                           ..+++|++||++|.   ...++++|+++|+++.+|......          ...+.  .....+++..+++++++
T Consensus       235 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~  314 (350)
T cd08240         235 RIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKA  314 (350)
T ss_pred             HHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHc
Confidence                 13379999999984   488999999999999987654221          11111  12345789999999999


Q ss_pred             CCeeEeecccccC
Q 023273          271 GKVKAIIDPKGLL  283 (284)
Q Consensus       271 g~i~~~i~~~~~~  283 (284)
                      |.+++.+.++|++
T Consensus       315 ~~i~~~~~~~~~~  327 (350)
T cd08240         315 GKLKPIPLTERPL  327 (350)
T ss_pred             CCCccceeeEEcH
Confidence            9998766666664

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=6.9e-33  Score=248.73  Aligned_cols=274  Identities=25%  Similarity=0.308  Sum_probs=215.3

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++..++..   ++++ +.|.|+|.++||+|++.++++|++|++.+.|.++   ..+|.++|||++|+|+++|++++
T Consensus         8 ~~a~~~~~~~~~---~~l~-~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~---~~~p~v~G~e~~G~V~~vG~~v~   80 (373)
T cd08299           8 CKAAVLWEPKKP---FSIE-EIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV---TPFPVILGHEAAGIVESVGEGVT   80 (373)
T ss_pred             eEEEEEecCCCC---cEEE-EeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC---CCCCccccccceEEEEEeCCCCc
Confidence            788888877765   7888 8899999999999999999999999999988752   34678999999999999999999


Q ss_pred             CCCCCCEEEEecCc-------ccc--------------------------------CCCCCCCceeeEEeeecCceeeCC
Q 023273           81 KFKVGDEVYGDINE-------KAL--------------------------------DHPKRNGSLAEYTAVEENLLALKP  121 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~-------~~~--------------------------------~~~~~~g~~~~~~~~~~~~~~~ip  121 (284)
                      .+++||+|++....       +..                                ......|+|++|++++.+.++++|
T Consensus        81 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP  160 (373)
T cd08299          81 TVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKID  160 (373)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCC
Confidence            99999999876210       000                                000125899999999999999999


Q ss_pred             CCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcE
Q 023273          122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL  199 (284)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~  199 (284)
                      +++++++++++++++.|||+++ ...+++++++|+|+| +|++|++++++|+.+ |. +|+++++++++.+.++++|+++
T Consensus       161 ~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~-G~~~Vi~~~~~~~~~~~a~~lGa~~  238 (373)
T cd08299         161 AAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAA-GASRIIAVDINKDKFAKAKELGATE  238 (373)
T ss_pred             CCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCce
Confidence            9999999999999999999986 678899999999997 799999999999996 88 7999999999999999999988


Q ss_pred             EeeCCCcc--ccc-----CCCcccEEEeCCCCc---HHHHHh-hccCCEEEEEcCCCCCCcee-----------EE---E
Q 023273          200 AIDYTKEN--IED-----LPEKFDVVFDAVGQC---DKALKA-VKEGGRVVSIIGSVTPPASS-----------FV---L  254 (284)
Q Consensus       200 ~~~~~~~~--~~~-----~~~~~d~vid~~g~~---~~~~~~-l~~~G~~v~~g~~~~~~~~~-----------~~---~  254 (284)
                      +++..+..  ...     ..+++|++||++|..   ..++.. ++++|+++.+|....+..+.           +.   .
T Consensus       239 ~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~  318 (373)
T cd08299         239 CINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVF  318 (373)
T ss_pred             EecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEe
Confidence            88765322  111     135799999999852   444554 46799999998653211111           11   1


Q ss_pred             ec--cHHHHHHHHHHHHCCC--eeEeecccccC
Q 023273          255 TS--DGSILEKLNPYFESGK--VKAIIDPKGLL  283 (284)
Q Consensus       255 ~~--~~~~~~~~~~~~~~g~--i~~~i~~~~~~  283 (284)
                      ..  ..+++.++++++.++.  +++.++++|||
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  351 (373)
T cd08299         319 GGWKSKDSVPKLVADYMAKKFNLDPLITHTLPF  351 (373)
T ss_pred             cCCccHHHHHHHHHHHHcCCCCchhheeeeecH
Confidence            11  2357777888777765  44567888875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=2.5e-32  Score=240.17  Aligned_cols=273  Identities=30%  Similarity=0.404  Sum_probs=223.2

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCC-CCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT-DSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      |||+++.+++.+ ..+++. +.+.|.+.++||+|++.++++|++|++...|..+.. ....|.++|||++|+|+++|+++
T Consensus         1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v   78 (324)
T cd08244           1 MRAIRLHEFGPP-EVLVPE-DVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGV   78 (324)
T ss_pred             CeEEEEcCCCCc-cceEEe-ccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCC
Confidence            999999887765 557777 666677899999999999999999999888764321 23456789999999999999999


Q ss_pred             CCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcC
Q 023273           80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG  159 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga  159 (284)
                      ..+++||+|++...       ...|+|++|+.++.+.++++|+++++.+++.+++.+.|||..+...+++++++|+|+|+
T Consensus        79 ~~~~~Gd~V~~~~~-------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vlI~g~  151 (324)
T cd08244          79 DPAWLGRRVVAHTG-------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAA  151 (324)
T ss_pred             CCCCCCCEEEEccC-------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            99999999999752       23689999999999999999999999999999999999976667889999999999999


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKA  231 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~  231 (284)
                      +|.+|.+++++|+.+ |++++++++++++.+.++++|.+.+++.+...+.+    .  ++++|+++|++|+  ...++++
T Consensus       152 ~~~~g~~~~~la~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~  230 (324)
T cd08244         152 AGGLGSLLVQLAKAA-GATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALAL  230 (324)
T ss_pred             CchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHH
Confidence            999999999999996 99999999999999999999988888765433211    1  3579999999986  4788999


Q ss_pred             hccCCEEEEEcCCCCC-Cc----------eeEE---Ee-----ccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          232 VKEGGRVVSIIGSVTP-PA----------SSFV---LT-----SDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       232 l~~~G~~v~~g~~~~~-~~----------~~~~---~~-----~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      ++++|+++.+|..... ..          ..+.   ..     ...+.+++++++++++.+++.++++||+
T Consensus       231 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~  301 (324)
T cd08244         231 LAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQTFPL  301 (324)
T ss_pred             hccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceEEeH
Confidence            9999999999865321 11          1111   00     1146788899999999998878777764

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-33  Score=244.64  Aligned_cols=274  Identities=31%  Similarity=0.468  Sum_probs=223.0

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||+++++.+++.   ++++ +.|.|++.+||++|++.++++|++|++...|.++.  .++|.++|||++|+|+.+|++++
T Consensus         1 m~a~~~~~~~~~---~~~~-~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~~g~~~~   74 (334)
T PRK13771          1 MKAVILPGFKQG---YRIE-EVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR--MKYPVILGHEVVGTVEEVGENVK   74 (334)
T ss_pred             CeeEEEcCCCCC---cEEE-eCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC--CCCCeeccccceEEEEEeCCCCc
Confidence            999999999875   7898 78999999999999999999999999988886542  34577899999999999999998


Q ss_pred             CCCCCCEEEEecCcc------------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273           81 KFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (284)
                      .+++||+|++.....                  ...+...+|+|++|+.++.+.++++|+++++.+++.+++.+.+||++
T Consensus        75 ~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~  154 (334)
T PRK13771         75 GFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRG  154 (334)
T ss_pred             cCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHH
Confidence            899999999863100                  00112236899999999999999999999999999999999999999


Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC--cccccCCCcccEEEe
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK--ENIEDLPEKFDVVFD  220 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~d~vid  220 (284)
                      +...++.++++|+|+|++|.+|++++++|+.+ |.+++++++++++.+.++++ ++.+++.+.  ..+... .++|++||
T Consensus       155 ~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~-g~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~-~~~d~~ld  231 (334)
T PRK13771        155 LRRAGVKKGETVLVTGAGGGVGIHAIQVAKAL-GAKVIAVTSSESKAKIVSKY-ADYVIVGSKFSEEVKKI-GGADIVIE  231 (334)
T ss_pred             HHhcCCCCCCEEEEECCCccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH-HHHhcCchhHHHHHHhc-CCCcEEEE
Confidence            86558899999999998899999999999996 99999999999999888877 655555431  111222 37999999


Q ss_pred             CCCC--cHHHHHhhccCCEEEEEcCCCCCC------------ceeEE--EeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          221 AVGQ--CDKALKAVKEGGRVVSIIGSVTPP------------ASSFV--LTSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       221 ~~g~--~~~~~~~l~~~G~~v~~g~~~~~~------------~~~~~--~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      |+|+  ...++++|+++|+++.+|......            ...+.  .....++++++++++++|.+++.+.++||+
T Consensus       232 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  310 (334)
T PRK13771        232 TVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPVIGAEVSL  310 (334)
T ss_pred             cCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcceEeeeEcH
Confidence            9985  578999999999999998643211            11111  223578899999999999998888888775

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.9e-32  Score=237.05  Aligned_cols=261  Identities=33%  Similarity=0.429  Sum_probs=214.6

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++...+ + ..++++ +.+.|.+.++|++|++.++++|++|.+...+.      ..+.++|||++|+|+++|+++.
T Consensus         1 ~~~~~~~~~~-~-~~~~~~-~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~------~~~~~~g~e~~G~v~~~G~~v~   71 (305)
T cd08270           1 MRALVVDPDA-P-LRLRLG-EVPDPQPAPHEALVRVAAISLNRGELKFAAER------PDGAVPGWDAAGVVERAAADGS   71 (305)
T ss_pred             CeEEEEccCC-C-ceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHhhccC------CCCCcccceeEEEEEEeCCCCC
Confidence            8999998766 4 557888 78888899999999999999999999876532      2356799999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA  160 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~  160 (284)
                      .|++||+|++...         .|+|++|+.++.+.++++|+++++.+++++++.+.|||+++......+|++++|+|+.
T Consensus        72 ~~~~Gd~V~~~~~---------~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~  142 (305)
T cd08270          72 GPAVGARVVGLGA---------MGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGAS  142 (305)
T ss_pred             CCCCCCEEEEecC---------CcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCC
Confidence            9999999998642         5899999999999999999999999999999999999999865444569999999988


Q ss_pred             chHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC--cHHHHHhhccCCEE
Q 023273          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CDKALKAVKEGGRV  238 (284)
Q Consensus       161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~l~~~G~~  238 (284)
                      |.+|.+++++|+.. |++++.+++++++.+.++++|.+..++.... +  ..+++|+++|++|+  ...++++|+++|++
T Consensus       143 ~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~--~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~  218 (305)
T cd08270         143 GGVGRFAVQLAALA-GAHVVAVVGSPARAEGLRELGAAEVVVGGSE-L--SGAPVDLVVDSVGGPQLARALELLAPGGTV  218 (305)
T ss_pred             cHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecccc-c--cCCCceEEEECCCcHHHHHHHHHhcCCCEE
Confidence            99999999999995 9999999999999999999997655543221 1  12579999999985  58899999999999


Q ss_pred             EEEcCCCCC-C------------ceeEE---Ee---ccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          239 VSIIGSVTP-P------------ASSFV---LT---SDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       239 v~~g~~~~~-~------------~~~~~---~~---~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +.+|..... .            ...+.   +.   ...+.++.+++++++|++++.+.+++++
T Consensus       219 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  282 (305)
T cd08270         219 VSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRGSW  282 (305)
T ss_pred             EEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccceeccEEcH
Confidence            999854311 0            11111   11   1246788999999999999887777764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1.2e-32  Score=249.05  Aligned_cols=281  Identities=30%  Similarity=0.419  Sum_probs=219.4

Q ss_pred             CeEEEEc--ccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC-------C-CCCCCcccccceeE
Q 023273            1 MKAWVYK--EYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-------T-DSPLPTIPGYDVAG   70 (284)
Q Consensus         1 m~a~~~~--~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-------~-~~~~p~~~G~e~~G   70 (284)
                      ||++++.  .+|.+...++++ +.|.|.++++||+|++.++++|++|++...|....       . ....+.++|||++|
T Consensus        13 ~~a~~~~~~~~g~~~~~~~~~-~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G   91 (393)
T cd08246          13 MYAFAIRPERYGDPAQAIQLE-DVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASG   91 (393)
T ss_pred             hhheeeecccCCCcccceEEe-ecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEE
Confidence            7888885  344431237888 78899999999999999999999999887664100       0 01123578999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEecCccc------------------cCC-CCCCCceeeEEeeecCceeeCCCCCCHHhhhc
Q 023273           71 VVEKVGSQVKKFKVGDEVYGDINEKA------------------LDH-PKRNGSLAEYTAVEENLLALKPKNLSFVEAAS  131 (284)
Q Consensus        71 ~V~~vG~~~~~~~~Gd~V~~~~~~~~------------------~~~-~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~  131 (284)
                      +|+++|++++.+++||+|++.+....                  ..+ ...+|+|++|++++...++++|+++++++++.
T Consensus        92 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~  171 (393)
T cd08246          92 IVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAA  171 (393)
T ss_pred             EEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhh
Confidence            99999999999999999988742100                  000 01359999999999999999999999999999


Q ss_pred             ccchHHHHHHHHH-h--cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc-
Q 023273          132 LPLATETAYEGLE-R--SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN-  207 (284)
Q Consensus       132 ~~~~~~ta~~al~-~--~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-  207 (284)
                      +++++.|||+++. .  ++++++++|+|+|++|++|++++++|+.+ |+++++++.++++.+.++++|++.+++++.++ 
T Consensus       172 l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~-G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~  250 (393)
T cd08246         172 YMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAA-GANPVAVVSSEEKAEYCRALGAEGVINRRDFDH  250 (393)
T ss_pred             hcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHcCCCEEEccccccc
Confidence            9999999999984 3  68899999999998899999999999996 99999999999999999999998888864321 


Q ss_pred             ---------------------ccc----C--CC-cccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCC-CCceeE----
Q 023273          208 ---------------------IED----L--PE-KFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT-PPASSF----  252 (284)
Q Consensus       208 ---------------------~~~----~--~~-~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~-~~~~~~----  252 (284)
                                           +.+    .  .. ++|++||++|+  ...++++++++|+++.+|.... +..++.    
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~  330 (393)
T cd08246         251 WGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLW  330 (393)
T ss_pred             ccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHh
Confidence                                 101    1  23 79999999985  5789999999999999976432 111110    


Q ss_pred             --------EEeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          253 --------VLTSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       253 --------~~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                              ......+++.+++++++++.+.+.++++||+
T Consensus       331 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l  369 (393)
T cd08246         331 MRQKRIQGSHFANDREAAEANRLVMKGRIDPCLSKVFSL  369 (393)
T ss_pred             hheeEEEecccCcHHHHHHHHHHHHcCCceeeeeEEEeH
Confidence                    0011345889999999999999888888875

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=2.3e-32  Score=241.09  Aligned_cols=270  Identities=29%  Similarity=0.361  Sum_probs=221.9

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++..+|.+ ..++++ +.+.|+|+++||+|++.++++|++|++...|.++.  ...|..+|||++|+|+.+|++++
T Consensus         2 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~vG~~v~   77 (327)
T PRK10754          2 AKRIEFHKHGGP-EVLQAV-EFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP--PSLPSGLGTEAAGVVSKVGSGVK   77 (327)
T ss_pred             ceEEEEeccCCh-hHeEEe-eccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC--CCCCCccCcceEEEEEEeCCCCC
Confidence            899999998887 678998 78899999999999999999999999988776532  23467899999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga  159 (284)
                      .+++||+|++..        ...|+|++|+.++.+.++++|+++++++++.+++.+.+||+++ ...++.+|++|+|+|+
T Consensus        78 ~~~~Gd~V~~~~--------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~  149 (327)
T PRK10754         78 HIKVGDRVVYAQ--------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAA  149 (327)
T ss_pred             CCCCCCEEEECC--------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeC
Confidence            999999998642        1258999999999999999999999999998888999999988 4578999999999999


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC--cHHHHHh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKA  231 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~--~~~~~~~  231 (284)
                      +|.+|++++++|+.+ |++++.++.++++.+.++++|.+.+++.+...+.+.      ++++|++|||+|+  ...++++
T Consensus       150 ~g~ig~~~~~lak~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~  228 (327)
T PRK10754        150 AGGVGLIACQWAKAL-GAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDC  228 (327)
T ss_pred             CcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHH
Confidence            999999999999996 999999999999999999999888887655433221      4579999999985  4788999


Q ss_pred             hccCCEEEEEcCCCCC-C--ce--------eEEE-------ecc----HHHHHHHHHHHHCCCeeEe--ecccccC
Q 023273          232 VKEGGRVVSIIGSVTP-P--AS--------SFVL-------TSD----GSILEKLNPYFESGKVKAI--IDPKGLL  283 (284)
Q Consensus       232 l~~~G~~v~~g~~~~~-~--~~--------~~~~-------~~~----~~~~~~~~~~~~~g~i~~~--i~~~~~~  283 (284)
                      ++++|+++.+|..... .  .+        .+..       ..+    .+.++++++++++|.+++.  +.++||+
T Consensus       229 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~  304 (327)
T PRK10754        229 LQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPL  304 (327)
T ss_pred             hccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcH
Confidence            9999999999854311 1  10        1100       011    2345678999999999864  5677774

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.1e-32  Score=245.46  Aligned_cols=275  Identities=22%  Similarity=0.301  Sum_probs=215.0

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC-------CCCCCCcccccceeEEEE
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-------TDSPLPTIPGYDVAGVVE   73 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-------~~~~~p~~~G~e~~G~V~   73 (284)
                      |||+++.++++    ++++ +.+.|++++++|+|++.++++|++|++.+.|.+..       ...+.|.++|||++|+|+
T Consensus         1 mka~~~~~~~~----~~~~-~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~   75 (350)
T cd08256           1 MRAVVCHGPQD----YRLE-EVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVV   75 (350)
T ss_pred             CeeEEEecCCc----eEEE-ECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEE
Confidence            99999987775    5898 88999999999999999999999999988875311       001457789999999999


Q ss_pred             EeCCCCC--CCCCCCEEEEecCcccc------------------CCC--CCCCceeeEEeeecC-ceeeCCCCCCHHhhh
Q 023273           74 KVGSQVK--KFKVGDEVYGDINEKAL------------------DHP--KRNGSLAEYTAVEEN-LLALKPKNLSFVEAA  130 (284)
Q Consensus        74 ~vG~~~~--~~~~Gd~V~~~~~~~~~------------------~~~--~~~g~~~~~~~~~~~-~~~~ip~~~~~~~aa  130 (284)
                      ++|++++  +|++||+|++.+.....                  .+.  ...|+|++|+.++.+ .++++|+++++++++
T Consensus        76 ~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa  155 (350)
T cd08256          76 ELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAI  155 (350)
T ss_pred             EeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHh
Confidence            9999998  89999999874210000                  001  136899999999988 678999999998888


Q ss_pred             cccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCcccc
Q 023273          131 SLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (284)
Q Consensus       131 ~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (284)
                      .+ .++.|+|+++...++.++++|+|.| +|.+|.+++++|+.+ |++ ++++++++++.+.++++|++.+++.+...+.
T Consensus       156 ~~-~~~~ta~~a~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  232 (350)
T cd08256         156 LI-EPLACALHAVDRANIKFDDVVVLAG-AGPLGLGMIGAARLK-NPKKLIVLDLKDERLALARKFGADVVLNPPEVDVV  232 (350)
T ss_pred             hh-hHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHH
Confidence            88 8888999998778899999999955 799999999999997 765 6677788889998899999888877543322


Q ss_pred             c----C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCceeE-----------EE-eccHHHHHHHHHHH
Q 023273          210 D----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASSF-----------VL-TSDGSILEKLNPYF  268 (284)
Q Consensus       210 ~----~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~  268 (284)
                      .    .  ..++|++||++|+   ...++++++++|+++.+|.......+..           .. ......++++++++
T Consensus       233 ~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (350)
T cd08256         233 EKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLI  312 (350)
T ss_pred             HHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHH
Confidence            2    1  3479999999984   4778999999999999975432211111           00 11235688999999


Q ss_pred             HCCCeeEe--ecccccC
Q 023273          269 ESGKVKAI--IDPKGLL  283 (284)
Q Consensus       269 ~~g~i~~~--i~~~~~~  283 (284)
                      ++|.+++.  +.++||+
T Consensus       313 ~~g~l~~~~~~~~~~~l  329 (350)
T cd08256         313 ASGRLPTDGIVTHQFPL  329 (350)
T ss_pred             HcCCCChhHheEEEeEH
Confidence            99999873  6777764

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=1.9e-32  Score=246.98  Aligned_cols=274  Identities=28%  Similarity=0.345  Sum_probs=217.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      |||+++.+++.    ++++ +.+.|.| .+++|+|++.++++|++|+..+.|.++.  .++|.++|||++|+|+++|+++
T Consensus         1 m~a~~~~~~~~----~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~p~~~G~e~~G~V~~vG~~v   73 (386)
T cd08283           1 MKALVWHGKGD----VRVE-EVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG--MKKGDILGHEFMGVVEEVGPEV   73 (386)
T ss_pred             CeeEEEecCCC----ceEE-eCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC--CCCCccccccceEEEEEeCCCC
Confidence            99999986654    6888 7888888 4999999999999999999999897653  3457899999999999999999


Q ss_pred             CCCCCCCEEEEecCcc---------------cc------------------CC-----CCCCCceeeEEeeecC--ceee
Q 023273           80 KKFKVGDEVYGDINEK---------------AL------------------DH-----PKRNGSLAEYTAVEEN--LLAL  119 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~---------------~~------------------~~-----~~~~g~~~~~~~~~~~--~~~~  119 (284)
                      +++++||+|++.+...               ..                  .+     ...+|+|++|++++.+  .+++
T Consensus        74 ~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~  153 (386)
T cd08283          74 RNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFK  153 (386)
T ss_pred             CCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEE
Confidence            9999999998864110               00                  00     0136899999999987  8999


Q ss_pred             CCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCc
Q 023273          120 KPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD  198 (284)
Q Consensus       120 ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~  198 (284)
                      +|++++++++++++..++|||+++...++.++++|+|+| +|.+|.+++++|+.. |. ++++++.++++.+.+++++..
T Consensus       154 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~-g~~~vi~~~~~~~~~~~~~~~~~~  231 (386)
T cd08283         154 IPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWG-CGPVGLFAARSAKLL-GAERVIAIDRVPERLEMARSHLGA  231 (386)
T ss_pred             CCCCCCHHHHhhhccchhhhHHHHhhccCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCc
Confidence            999999999999999999999999778899999999997 799999999999996 86 588999999999999988544


Q ss_pred             EEeeCCCcc-ccc----C--CCcccEEEeCCCC------------------------cHHHHHhhccCCEEEEEcCCCC-
Q 023273          199 LAIDYTKEN-IED----L--PEKFDVVFDAVGQ------------------------CDKALKAVKEGGRVVSIIGSVT-  246 (284)
Q Consensus       199 ~~~~~~~~~-~~~----~--~~~~d~vid~~g~------------------------~~~~~~~l~~~G~~v~~g~~~~-  246 (284)
                      .++++...+ +..    .  .+++|++||++|+                        ...++++++++|+++.+|.... 
T Consensus       232 ~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~  311 (386)
T cd08283         232 ETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGT  311 (386)
T ss_pred             EEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCC
Confidence            567665432 221    1  3479999999863                        3678999999999999986532 


Q ss_pred             CC----------ceeEEE--eccHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273          247 PP----------ASSFVL--TSDGSILEKLNPYFESGKVKA--IIDPKGLL  283 (284)
Q Consensus       247 ~~----------~~~~~~--~~~~~~~~~~~~~~~~g~i~~--~i~~~~~~  283 (284)
                      ..          ...+..  ....+.++++++++.++++.+  .++++||+
T Consensus       312 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l  362 (386)
T cd08283         312 VNKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPL  362 (386)
T ss_pred             cCccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecH
Confidence            11          111111  123567899999999999976  36666664

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-32  Score=239.98  Aligned_cols=270  Identities=33%  Similarity=0.488  Sum_probs=220.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..++.. ..+++. +.+.|++.++|++|++.++++|+.|.....|.++. ....|.++|||++|+|+++|++++
T Consensus         2 m~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~   78 (334)
T PTZ00354          2 MRAVTLKGFGGV-DVLKIG-ESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP-PPGSSEILGLEVAGYVEDVGSDVK   78 (334)
T ss_pred             cEEEEEEecCCC-cceEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCcccceeeEEEEEEeCCCCC
Confidence            999999998876 557777 66777899999999999999999999988876532 223456899999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~ga  159 (284)
                      ++++||+|+++..         +|+|++|++++.+.++++|++++..+++.+++++.|||+++. ..++.++++|+|+|+
T Consensus        79 ~~~~Gd~V~~~~~---------~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga  149 (334)
T PTZ00354         79 RFKEGDRVMALLP---------GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAG  149 (334)
T ss_pred             CCCCCCEEEEecC---------CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            9999999998742         589999999999999999999999999999999999999984 578999999999999


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc-ccc----C--CCcccEEEeCCCC--cHHHHH
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IED----L--PEKFDVVFDAVGQ--CDKALK  230 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~----~--~~~~d~vid~~g~--~~~~~~  230 (284)
                      +|.+|++++++|+.+ |.++++++.++++.+.++++|.+.+++....+ +..    .  .+++|++||+.|+  ...+++
T Consensus       150 ~g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~  228 (334)
T PTZ00354        150 ASGVGTAAAQLAEKY-GAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAE  228 (334)
T ss_pred             CchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHH
Confidence            999999999999996 99988899999999999999988888765432 221    1  4579999999885  478999


Q ss_pred             hhccCCEEEEEcCCCCCC-c-e----------eEEE---ec-c--------HHHHHHHHHHHHCCCeeEeecccccC
Q 023273          231 AVKEGGRVVSIIGSVTPP-A-S----------SFVL---TS-D--------GSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       231 ~l~~~G~~v~~g~~~~~~-~-~----------~~~~---~~-~--------~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +++++|+++.++...... . +          .+..   .. .        .+.+++++++++++.+++.+.+.|++
T Consensus       229 ~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  305 (334)
T PTZ00354        229 VLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPL  305 (334)
T ss_pred             HhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcH
Confidence            999999999987543111 0 1          1110   00 0        13457888999999998877777764

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=2.7e-32  Score=242.72  Aligned_cols=274  Identities=43%  Similarity=0.657  Sum_probs=219.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCCCCC-------------CCCCCCccccc
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSA-------------TDSPLPTIPGY   66 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~~~~-------------~~~~~p~~~G~   66 (284)
                      |||+++.+++++.+.++++ +.+.|+| +++||+|++.++++|++|.+...|....             .....|.++||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~   79 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLE-NARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGR   79 (350)
T ss_pred             CceEEecccCCCcceeeec-ccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecc
Confidence            8999999888763457888 7888999 4999999999999999999988774210             02345789999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-h
Q 023273           67 DVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-R  145 (284)
Q Consensus        67 e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~  145 (284)
                      |++|+|+.+|+++++|++||+|++....      ...|+|++|++++.+.++++|+++++++++.+++++.|||+++. .
T Consensus        80 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~  153 (350)
T cd08248          80 DCSGVVVDIGSGVKSFEIGDEVWGAVPP------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNV  153 (350)
T ss_pred             eeEEEEEecCCCcccCCCCCEEEEecCC------CCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHh
Confidence            9999999999999999999999986531      23689999999999999999999999999999999999999984 4


Q ss_pred             cccC----CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc---CCCcccEE
Q 023273          146 SAFS----AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED---LPEKFDVV  218 (284)
Q Consensus       146 ~~~~----~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~d~v  218 (284)
                      ..+.    +|++|+|+|++|.+|++++++|+++ |++++++.++ ++.+.++++|.+.+++.....+..   ..+++|++
T Consensus       154 ~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~-G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~v  231 (350)
T cd08248         154 GGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAW-GAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVI  231 (350)
T ss_pred             ccCCCccCCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHhcCCCCEE
Confidence            5554    4999999999999999999999996 9998887754 677788899988787765432221   13579999


Q ss_pred             EeCCCC--cHHHHHhhccCCEEEEEcCCCCC--C-----------ceeE--------E---------EeccHHHHHHHHH
Q 023273          219 FDAVGQ--CDKALKAVKEGGRVVSIIGSVTP--P-----------ASSF--------V---------LTSDGSILEKLNP  266 (284)
Q Consensus       219 id~~g~--~~~~~~~l~~~G~~v~~g~~~~~--~-----------~~~~--------~---------~~~~~~~~~~~~~  266 (284)
                      ||++|.  ...++++++++|+++.++.....  .           .+.+        .         .....+.+.++++
T Consensus       232 i~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (350)
T cd08248         232 LDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAK  311 (350)
T ss_pred             EECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHH
Confidence            999985  57899999999999998754210  0           0000        0         0113567899999


Q ss_pred             HHHCCCeeEeecccccC
Q 023273          267 YFESGKVKAIIDPKGLL  283 (284)
Q Consensus       267 ~~~~g~i~~~i~~~~~~  283 (284)
                      ++++|.+++.++++||+
T Consensus       312 ~~~~g~~~~~~~~~~~~  328 (350)
T cd08248         312 LVEDGKIKPVIDKVFPF  328 (350)
T ss_pred             HHhCCCEecccceeecH
Confidence            99999999888888875

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.5e-32  Score=239.92  Aligned_cols=275  Identities=35%  Similarity=0.465  Sum_probs=223.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++..++..   +.++ +.|.|++.+++|+|++.++++|++|++...|.++.  ...|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~~G~~v~   74 (332)
T cd08259           1 MKAAILHKPNKP---LQIE-EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR--GKYPLILGHEIVGTVEEVGEGVE   74 (332)
T ss_pred             CeEEEEecCCCc---eEEE-EccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC--CCCCeeccccceEEEEEECCCCc
Confidence            899999875444   7888 78999999999999999999999999998886642  24577899999999999999999


Q ss_pred             CCCCCCEEEEecCcc------------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273           81 KFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (284)
                      .+++||+|+++....                  ...+....|+|++|++++.+.++++|+++++++++.+++++.|||++
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~  154 (332)
T cd08259          75 RFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHA  154 (332)
T ss_pred             cCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHH
Confidence            999999999874210                  00111236899999999999999999999999999999999999999


Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC--cccccCCCcccEEEe
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK--ENIEDLPEKFDVVFD  220 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~d~vid  220 (284)
                      +...++.++++++|+|++|.+|++++++++.. |.+++++++++++.+.+++++.+.+++...  ..+... .++|++++
T Consensus       155 l~~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~v~~  232 (332)
T cd08259         155 LKRAGVKKGDTVLVTGAGGGVGIHAIQLAKAL-GARVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKKL-GGADVVIE  232 (332)
T ss_pred             HHHhCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHcCCcEEEecHHHHHHHHhc-cCCCEEEE
Confidence            96688899999999999999999999999995 999999999989988888888777776543  111122 37999999


Q ss_pred             CCCC--cHHHHHhhccCCEEEEEcCCCCC-C----------ceeE--EEeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          221 AVGQ--CDKALKAVKEGGRVVSIIGSVTP-P----------ASSF--VLTSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       221 ~~g~--~~~~~~~l~~~G~~v~~g~~~~~-~----------~~~~--~~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      ++|.  ...++++++++|+++.++..... .          ...+  ......++++++++++++|.+++.++++||+
T Consensus       233 ~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  310 (332)
T cd08259         233 LVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPVIDRVVSL  310 (332)
T ss_pred             CCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccceeEEEcH
Confidence            9985  47899999999999998754311 0          1111  1123467899999999999999888888774

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.5e-32  Score=240.61  Aligned_cols=274  Identities=25%  Similarity=0.330  Sum_probs=215.4

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCC---------CCCCCCCcccccceeEE
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS---------ATDSPLPTIPGYDVAGV   71 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~---------~~~~~~p~~~G~e~~G~   71 (284)
                      |||+++..+  .   ++++ +.+.|+++++||+|++.++++|++|++...|...         ......|.++|+|++|+
T Consensus         1 m~a~~~~~~--~---~~~~-~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~   74 (341)
T cd08262           1 MRAAVFRDG--P---LVVR-DVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGE   74 (341)
T ss_pred             CceEEEeCC--c---eEEE-ecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEE
Confidence            899999866  3   7888 8899999999999999999999999998877311         01123467899999999


Q ss_pred             EEEeCCCCCC-CCCCCEEEEecCccccC--------CCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273           72 VEKVGSQVKK-FKVGDEVYGDINEKALD--------HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (284)
Q Consensus        72 V~~vG~~~~~-~~~Gd~V~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (284)
                      |+++|+++++ |++||+|++.+......        .....|+|++|++++.+.++++|+++++++++ ++.++++||++
T Consensus        75 V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~  153 (341)
T cd08262          75 VVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHA  153 (341)
T ss_pred             EEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHH
Confidence            9999999987 99999999874211110        01136899999999999999999999988776 66788899998


Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccc--------c-cCC
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENI--------E-DLP  212 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--------~-~~~  212 (284)
                      +...+++++++|+|+| +|.+|.+++++|+.+ |++ +++++.++++.+.++++|.+++++++..+.        . ...
T Consensus       154 ~~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~  231 (341)
T cd08262         154 VRRARLTPGEVALVIG-CGPIGLAVIAALKAR-GVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGG  231 (341)
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCC
Confidence            8788999999999997 699999999999996 876 556667889999999999888888654321        0 114


Q ss_pred             CcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCC----------CceeE--EEeccHHHHHHHHHHHHCCCeeE--
Q 023273          213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP----------PASSF--VLTSDGSILEKLNPYFESGKVKA--  275 (284)
Q Consensus       213 ~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~--~~~~~~~~~~~~~~~~~~g~i~~--  275 (284)
                      +++|++||++|+   ...++++++++|+++.+|.....          ...++  ......+++.++++++++|.+.+  
T Consensus       232 ~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~  311 (341)
T cd08262         232 PKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEGKVDVAP  311 (341)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCCCChHH
Confidence            579999999885   37789999999999999865311          11222  22335568999999999999875  


Q ss_pred             eecccccC
Q 023273          276 IIDPKGLL  283 (284)
Q Consensus       276 ~i~~~~~~  283 (284)
                      .|.++||+
T Consensus       312 ~i~~~~~l  319 (341)
T cd08262         312 MVTGTVGL  319 (341)
T ss_pred             heEEEeeH
Confidence            45677664

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=2.3e-32  Score=242.90  Aligned_cols=273  Identities=28%  Similarity=0.368  Sum_probs=219.2

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      ||++++..++.    +++. +.|.|.| .++||+|++.++++|++|++.+.|.++.  .++|.++|+|++|+|+++|+++
T Consensus         1 ~ka~~~~~~~~----~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~vG~~v   73 (347)
T cd05278           1 MKALVYLGPGK----IGLE-EVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG--AKHGMILGHEFVGEVVEVGSDV   73 (347)
T ss_pred             CceEEEecCCc----eEEE-EcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC--CCCCceeccceEEEEEEECCCc
Confidence            89999998776    5888 7888889 8999999999999999999999887653  3557899999999999999999


Q ss_pred             CCCCCCCEEEEecCccc---------------c------CCCCCCCceeeEEeeecC--ceeeCCCCCCHHhhhcccchH
Q 023273           80 KKFKVGDEVYGDINEKA---------------L------DHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLAT  136 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~---------------~------~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~  136 (284)
                      +++++||+|++.+....               .      .+...+|+|++|++++.+  .++++|++++.++++.+++++
T Consensus        74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~  153 (347)
T cd05278          74 KRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDIL  153 (347)
T ss_pred             cccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchh
Confidence            99999999987421000               0      011236899999999987  899999999999999999999


Q ss_pred             HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C
Q 023273          137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L  211 (284)
Q Consensus       137 ~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~  211 (284)
                      .|||+++...+++++++|+|.| +|.+|.+++++|+.+ |. +++++++++++.+.++++|.+.+++++...+..    .
T Consensus       154 ~ta~~~~~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~-g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~  231 (347)
T cd05278         154 PTGFHGAELAGIKPGSTVAVIG-AGPVGLCAVAGARLL-GAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILEL  231 (347)
T ss_pred             hheeehhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHH
Confidence            9999998778899999999976 699999999999996 85 788888888899988999988888876544322    1


Q ss_pred             --CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC-----------ceeEEE--eccHHHHHHHHHHHHCCCe
Q 023273          212 --PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-----------ASSFVL--TSDGSILEKLNPYFESGKV  273 (284)
Q Consensus       212 --~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~--~~~~~~~~~~~~~~~~g~i  273 (284)
                        .+++|++||++|.   ...++++|+++|+++.+|......           ...+..  ....+.++++++++++|.+
T Consensus       232 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  311 (347)
T cd05278         232 TGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKI  311 (347)
T ss_pred             cCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCC
Confidence              3579999999875   478899999999999987543211           111111  1235789999999999998


Q ss_pred             eEe--eccccc
Q 023273          274 KAI--IDPKGL  282 (284)
Q Consensus       274 ~~~--i~~~~~  282 (284)
                      ++.  +...|+
T Consensus       312 ~~~~~~~~~~~  322 (347)
T cd05278         312 DPSKLITHRFP  322 (347)
T ss_pred             ChhHcEEEEec
Confidence            863  445554

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=4.1e-32  Score=245.77  Aligned_cols=281  Identities=31%  Similarity=0.429  Sum_probs=220.3

Q ss_pred             CeEEEEcc--cCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC-------C-CCCCC-ccccccee
Q 023273            1 MKAWVYKE--YGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-------T-DSPLP-TIPGYDVA   69 (284)
Q Consensus         1 m~a~~~~~--~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-------~-~~~~p-~~~G~e~~   69 (284)
                      |||+++..  ++++.+.+++. +.|.|.|.++|++|++.++++|++|.+...+....       . +...| .++|||++
T Consensus         8 ~~a~~~~~~~~~~~~~~~~~~-~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~   86 (398)
T TIGR01751         8 MYAFAIREERDGDPRQAIQLE-VVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDAS   86 (398)
T ss_pred             hhheEEecccCCCcccceEEe-ecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceE
Confidence            89999976  66653558888 88999999999999999999999998876553200       0 00123 37999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEEecCcc-------c-----------c-CCCCCCCceeeEEeeecCceeeCCCCCCHHhhh
Q 023273           70 GVVEKVGSQVKKFKVGDEVYGDINEK-------A-----------L-DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAA  130 (284)
Q Consensus        70 G~V~~vG~~~~~~~~Gd~V~~~~~~~-------~-----------~-~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa  130 (284)
                      |+|+++|++++.+++||+|++.+...       .           . .....+|+|++|++++.+.++++|+++++++++
T Consensus        87 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa  166 (398)
T TIGR01751        87 GVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAA  166 (398)
T ss_pred             EEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHh
Confidence            99999999999999999998864200       0           0 001136899999999999999999999999999


Q ss_pred             cccchHHHHHHHHH---hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc
Q 023273          131 SLPLATETAYEGLE---RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN  207 (284)
Q Consensus       131 ~~~~~~~ta~~al~---~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~  207 (284)
                      .+.+.+.|||+++.   ..++.++++|+|+|++|.+|++++++|+.+ |+++++++.++++.+.++++|++.++|++.++
T Consensus       167 ~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~-G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~  245 (398)
T TIGR01751       167 CPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAG-GGNPVAVVSSPEKAEYCRELGAEAVIDRNDFG  245 (398)
T ss_pred             hccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCCEEecCCCcc
Confidence            99999999999984   377899999999998899999999999995 99999999999999999999999888865421


Q ss_pred             ----------------------ccc----C--CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCCC-Ccee-----
Q 023273          208 ----------------------IED----L--PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-PASS-----  251 (284)
Q Consensus       208 ----------------------~~~----~--~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~~-~~~~-----  251 (284)
                                            +.+    .  .+++|++|||+|.  ...++++++++|+++.+|..... ..++     
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  325 (398)
T TIGR01751       246 HWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLW  325 (398)
T ss_pred             hhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHh
Confidence                                  000    0  2579999999985  57899999999999999865321 1111     


Q ss_pred             -----E--EEeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          252 -----F--VLTSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       252 -----~--~~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                           +  .......++++++++++++.+.+.++++++|
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l  364 (398)
T TIGR01751       326 MRQKRIQGSHFANLREAWEANRLVAKGRIDPTLSKVYPL  364 (398)
T ss_pred             hcccEEEccccCcHHHHHHHHHHHHCCCcccceeeEEcH
Confidence                 0  1111234578899999999999888888764

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=8e-32  Score=237.71  Aligned_cols=267  Identities=28%  Similarity=0.360  Sum_probs=218.1

Q ss_pred             CeEEEEcccCC--CccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCC
Q 023273            1 MKAWVYKEYGN--SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ   78 (284)
Q Consensus         1 m~a~~~~~~g~--~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~   78 (284)
                      ||++++..+++  + +.++++ +.+.|.|.++|++|++.++++|++|++...|.++.. ..+|.++|||++|+|+.+|++
T Consensus         2 ~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~-~~~p~~~g~e~~G~v~~vG~~   78 (329)
T cd08250           2 FRKLVVHRLSPNFR-EATSIV-DVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG-VKPPFDCGFEGVGEVVAVGEG   78 (329)
T ss_pred             ceEEEeccCCCCcc-cCceEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC-CCCCcccCceeEEEEEEECCC
Confidence            99999999887  5 568898 788888999999999999999999999888865322 346789999999999999999


Q ss_pred             CCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEE
Q 023273           79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVL  157 (284)
Q Consensus        79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~  157 (284)
                      ++++++||+|++..          .|+|++|+.++.+.++++|+..  .+++.++.++.|||+++ +..++.++++++|+
T Consensus        79 v~~~~~Gd~V~~~~----------~g~~~s~~~v~~~~~~~ip~~~--~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~  146 (329)
T cd08250          79 VTDFKVGDAVATMS----------FGAFAEYQVVPARHAVPVPELK--PEVLPLLVSGLTASIALEEVGEMKSGETVLVT  146 (329)
T ss_pred             CCCCCCCCEEEEec----------CcceeEEEEechHHeEECCCCc--chhhhcccHHHHHHHHHHHhcCCCCCCEEEEE
Confidence            99999999999864          5899999999999999999973  46678889999999998 45789999999999


Q ss_pred             cCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-----CCCcccEEEeCCCC--cHHHHH
Q 023273          158 GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--CDKALK  230 (284)
Q Consensus       158 ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g~--~~~~~~  230 (284)
                      |++|.+|++++++|+.. |.+++++++++++.+.++++|.+.+++.....+.+     ..+++|++||++|+  ...+++
T Consensus       147 ga~g~ig~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~  225 (329)
T cd08250         147 AAAGGTGQFAVQLAKLA-GCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVD  225 (329)
T ss_pred             eCccHHHHHHHHHHHHc-CCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHHHHHHHHH
Confidence            99999999999999995 99999999999999999999987777765433211     14579999999985  478899


Q ss_pred             hhccCCEEEEEcCCCCC--------------------CceeEEEec-------cHHHHHHHHHHHHCCCeeEe--ecccc
Q 023273          231 AVKEGGRVVSIIGSVTP--------------------PASSFVLTS-------DGSILEKLNPYFESGKVKAI--IDPKG  281 (284)
Q Consensus       231 ~l~~~G~~v~~g~~~~~--------------------~~~~~~~~~-------~~~~~~~~~~~~~~g~i~~~--i~~~~  281 (284)
                      +++++|+++.+|.....                    ....+....       ..+.++++++++++|.+++.  +.+++
T Consensus       226 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  305 (329)
T cd08250         226 NLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFR  305 (329)
T ss_pred             HhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCcccc
Confidence            99999999999754311                    011111111       24567889999999999874  33445


Q ss_pred             cC
Q 023273          282 LL  283 (284)
Q Consensus       282 ~~  283 (284)
                      |+
T Consensus       306 ~~  307 (329)
T cd08250         306 GL  307 (329)
T ss_pred             CH
Confidence            53

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=5.9e-32  Score=239.60  Aligned_cols=273  Identities=26%  Similarity=0.363  Sum_probs=221.8

Q ss_pred             eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (284)
Q Consensus         2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   81 (284)
                      |+++.+..+.-   ++++ +.+.|+|.++|++|++.++++|++|.+.+.|.++  ..++|.++|||++|+|+++|+++++
T Consensus         1 ~~~~~~~~~~~---~~~~-~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~--~~~~p~~~g~e~~G~V~~vG~~v~~   74 (337)
T cd05283           1 KGYAARDASGK---LEPF-TFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG--PTKYPLVPGHEIVGIVVAVGSKVTK   74 (337)
T ss_pred             CceEEecCCCC---ceEE-eccCCCCCCCeEEEEEEEecccchHHHHhcCCcC--CCCCCcccCcceeeEEEEECCCCcc
Confidence            56777777755   8898 8899999999999999999999999999988763  2345789999999999999999999


Q ss_pred             CCCCCEEEEec-----Ccc----------cc-----------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccch
Q 023273           82 FKVGDEVYGDI-----NEK----------AL-----------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA  135 (284)
Q Consensus        82 ~~~Gd~V~~~~-----~~~----------~~-----------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~  135 (284)
                      |++||+|+..+     +++          ..           .+....|+|++|+.++.+.++++|+++++++++.+.+.
T Consensus        75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~  154 (337)
T cd05283          75 FKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA  154 (337)
T ss_pred             cCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhH
Confidence            99999997321     000          00           01123689999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccc-ccCCCc
Q 023273          136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI-EDLPEK  214 (284)
Q Consensus       136 ~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~  214 (284)
                      +.|||+++....++++++++|.| +|.+|++++++|+.+ |++++++++++++.+.++++|.+.+++.+..+. ....++
T Consensus       155 ~~ta~~~~~~~~~~~g~~vlV~g-~g~vG~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~  232 (337)
T cd05283         155 GITVYSPLKRNGVGPGKRVGVVG-IGGLGHLAVKFAKAL-GAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGS  232 (337)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCC
Confidence            99999999777789999999977 899999999999995 999999999999999999999888887654332 223578


Q ss_pred             ccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCce----------eE--EEeccHHHHHHHHHHHHCCCeeEeecc
Q 023273          215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SF--VLTSDGSILEKLNPYFESGKVKAIIDP  279 (284)
Q Consensus       215 ~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~g~i~~~i~~  279 (284)
                      +|++|||+|.   ...++++|+++|+++.+|.......+          .+  ......++++.+++++++|++++.+ +
T Consensus       233 ~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~-~  311 (337)
T cd05283         233 LDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPWV-E  311 (337)
T ss_pred             ceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccce-E
Confidence            9999999984   48899999999999999865422111          11  1123568899999999999998765 5


Q ss_pred             cccC
Q 023273          280 KGLL  283 (284)
Q Consensus       280 ~~~~  283 (284)
                      +||+
T Consensus       312 ~~~~  315 (337)
T cd05283         312 VIPM  315 (337)
T ss_pred             EEEH
Confidence            6664

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=5.3e-32  Score=240.57  Aligned_cols=274  Identities=24%  Similarity=0.334  Sum_probs=218.3

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      ||++++..++.    ++++ +.+.|+| .++||+|++.++++|++|+..+.|.++.  ..+|.++|||++|+|+++|+++
T Consensus         1 m~a~~~~~~~~----~~~~-~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~~G~~v   73 (345)
T cd08286           1 MKALVYHGPGK----ISWE-DRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT--VTPGRILGHEGVGVVEEVGSAV   73 (345)
T ss_pred             CceEEEecCCc----eeEE-ecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC--CCCCceecccceEEEEEeccCc
Confidence            89999998775    5888 7888886 8999999999999999999999887643  2347889999999999999999


Q ss_pred             CCCCCCCEEEEecCccc-------------------cCCCCCCCceeeEEeeecC--ceeeCCCCCCHHhhhcccchHHH
Q 023273           80 KKFKVGDEVYGDINEKA-------------------LDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLATET  138 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~-------------------~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~t  138 (284)
                      +.+++||+|++......                   ..+....|+|++|+.++.+  .++++|++++..+++.+++.++|
T Consensus        74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~t  153 (345)
T cd08286          74 TNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPT  153 (345)
T ss_pred             cccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHH
Confidence            99999999988642100                   0011235899999999987  89999999999999999999999


Q ss_pred             HHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C-
Q 023273          139 AYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L-  211 (284)
Q Consensus       139 a~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~-  211 (284)
                      ||.++ ...++.++++++|.| +|.+|.+++++|+.+ | .++++++.+++|.+.++++|++.+++++..++..    . 
T Consensus       154 a~~~~~~~~~~~~g~~vlI~g-~g~~g~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~  231 (345)
T cd08286         154 GYECGVLNGKVKPGDTVAIVG-AGPVGLAALLTAQLY-SPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELT  231 (345)
T ss_pred             HHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHh
Confidence            99876 567889999999987 699999999999996 8 7888888888899999999998888876433221    1 


Q ss_pred             -CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC----------ceeEEEecc-HHHHHHHHHHHHCCCeeE-
Q 023273          212 -PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVLTSD-GSILEKLNPYFESGKVKA-  275 (284)
Q Consensus       212 -~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~~~~-~~~~~~~~~~~~~g~i~~-  275 (284)
                       .+++|++||++|.   ...++++|+++|+++.+|....+.          ...+..... .+.+.++++++++|.+++ 
T Consensus       232 ~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  311 (345)
T cd08286         232 DGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPS  311 (345)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChH
Confidence             3579999999985   377789999999999998543211          112211112 267888999999999865 


Q ss_pred             -eecccccC
Q 023273          276 -IIDPKGLL  283 (284)
Q Consensus       276 -~i~~~~~~  283 (284)
                       .++++||+
T Consensus       312 ~~~~~~~~l  320 (345)
T cd08286         312 KLVTHRFKL  320 (345)
T ss_pred             HcEEeEeeH
Confidence             36777764

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=4e-32  Score=243.18  Aligned_cols=273  Identities=28%  Similarity=0.374  Sum_probs=218.6

Q ss_pred             eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (284)
Q Consensus         2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   81 (284)
                      ||+++..++..   ++++ +.+.|++.+++++|++.++++|++|++.+.|.++   ..+|.++|||++|+|+++|++++.
T Consensus         2 ~a~~~~~~~~~---~~~~-~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~---~~~~~i~g~e~~G~V~~vG~~v~~   74 (365)
T cd05279           2 KAAVLWEKGKP---LSIE-EIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP---TPLPVILGHEGAGIVESIGPGVTT   74 (365)
T ss_pred             ceeEEecCCCC---cEEE-EeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC---CCCCcccccceeEEEEEeCCCccc
Confidence            68888887765   7888 8899999999999999999999999999888653   345688999999999999999999


Q ss_pred             CCCCCEEEEecCcccc---------------------------------------CCCCCCCceeeEEeeecCceeeCCC
Q 023273           82 FKVGDEVYGDINEKAL---------------------------------------DHPKRNGSLAEYTAVEENLLALKPK  122 (284)
Q Consensus        82 ~~~Gd~V~~~~~~~~~---------------------------------------~~~~~~g~~~~~~~~~~~~~~~ip~  122 (284)
                      +++||+|++.+.....                                       .+....|+|++|+.++.+.++++|+
T Consensus        75 ~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  154 (365)
T cd05279          75 LKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDP  154 (365)
T ss_pred             CCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCC
Confidence            9999999886321000                                       0001247999999999999999999


Q ss_pred             CCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEE
Q 023273          123 NLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLA  200 (284)
Q Consensus       123 ~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~  200 (284)
                      ++++++++.+.+++.+||+++ ...++.+|++|+|+| +|++|++++++|+.+ |.+ ++++++++++.+.++++|.+++
T Consensus       155 ~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~  232 (365)
T cd05279         155 DAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAA-GASRIIAVDINKDKFEKAKQLGATEC  232 (365)
T ss_pred             CCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCCee
Confidence            999999999998999999987 568899999999997 799999999999996 876 6666779999999999999888


Q ss_pred             eeCCCc--cccc-----CCCcccEEEeCCCC---cHHHHHhhc-cCCEEEEEcCCCCCCceeE---------EE------
Q 023273          201 IDYTKE--NIED-----LPEKFDVVFDAVGQ---CDKALKAVK-EGGRVVSIIGSVTPPASSF---------VL------  254 (284)
Q Consensus       201 ~~~~~~--~~~~-----~~~~~d~vid~~g~---~~~~~~~l~-~~G~~v~~g~~~~~~~~~~---------~~------  254 (284)
                      ++.+..  ++.+     ..+++|++||++|.   ...++++++ ++|+++.+|.........+         .+      
T Consensus       233 v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~  312 (365)
T cd05279         233 INPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFG  312 (365)
T ss_pred             cccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHHhcCCeEEEEecc
Confidence            877544  2211     24689999999985   478899999 9999999875431111111         00      


Q ss_pred             -eccHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273          255 -TSDGSILEKLNPYFESGKVKA--IIDPKGLL  283 (284)
Q Consensus       255 -~~~~~~~~~~~~~~~~g~i~~--~i~~~~~~  283 (284)
                       ....+.+.++++++++|.+++  .++++|++
T Consensus       313 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l  344 (365)
T cd05279         313 GWKSKDSVPKLVALYRQKKFPLDELITHVLPF  344 (365)
T ss_pred             CCchHhHHHHHHHHHHcCCcchhHheeeeecH
Confidence             024578999999999999875  47777764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8.2e-32  Score=241.40  Aligned_cols=274  Identities=33%  Similarity=0.449  Sum_probs=220.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..++..   ++++ +.|.|.+.++||+|++.++++|++|+....|.++   ..+|.++|||++|+|+.+|+++.
T Consensus         1 ~~a~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~---~~~p~~~g~e~~G~v~~vG~~~~   73 (367)
T cd08263           1 MKAAVLKGPNPP---LTIE-EIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP---FPPPFVLGHEISGEVVEVGPNVE   73 (367)
T ss_pred             CeeEEEecCCCC---cEEE-EeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC---CCCCcccccccceEEEEeCCCCC
Confidence            999999988765   7888 7888989999999999999999999998888664   25578899999999999999998


Q ss_pred             C---CCCCCEEEEecCc-------c-------ccCC--------------------------CCCCCceeeEEeeecCce
Q 023273           81 K---FKVGDEVYGDINE-------K-------ALDH--------------------------PKRNGSLAEYTAVEENLL  117 (284)
Q Consensus        81 ~---~~~Gd~V~~~~~~-------~-------~~~~--------------------------~~~~g~~~~~~~~~~~~~  117 (284)
                      +   |++||+|++.+..       +       ....                          ....|+|++|+.++.+.+
T Consensus        74 ~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  153 (367)
T cd08263          74 NPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATAL  153 (367)
T ss_pred             CCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhE
Confidence            8   9999999884210       0       0000                          013689999999999999


Q ss_pred             eeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHc
Q 023273          118 ALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSL  195 (284)
Q Consensus       118 ~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~  195 (284)
                      +++|+++++.+++.++++++|||+++ ....+.++++|+|+| +|.+|++++++|+.+ |.+ +++++.++++.+.++++
T Consensus       154 ~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~-G~~~vi~~~~s~~~~~~~~~~  231 (367)
T cd08263         154 APLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAF-GASPIIAVDVRDEKLAKAKEL  231 (367)
T ss_pred             EECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHh
Confidence            99999999999999999999999998 456778999999996 899999999999995 887 88888899999999999


Q ss_pred             CCcEEeeCCCccccc----C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCC--C----------ceeEEE
Q 023273          196 GADLAIDYTKENIED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP--P----------ASSFVL  254 (284)
Q Consensus       196 g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~--~----------~~~~~~  254 (284)
                      |.+.+++++...+..    .  .+++|++||++++   ...++++|+++|+++.++.....  .          +..+..
T Consensus       232 g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  311 (367)
T cd08263         232 GATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIG  311 (367)
T ss_pred             CCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEe
Confidence            998888876544321    1  4579999999885   37889999999999999764321  1          111111


Q ss_pred             ---eccHHHHHHHHHHHHCCCeeEe--ecccccC
Q 023273          255 ---TSDGSILEKLNPYFESGKVKAI--IDPKGLL  283 (284)
Q Consensus       255 ---~~~~~~~~~~~~~~~~g~i~~~--i~~~~~~  283 (284)
                         ....+.+++++++++++.+++.  ++++|++
T Consensus       312 ~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~  345 (367)
T cd08263         312 SYGARPRQDLPELVGLAASGKLDPEALVTHKYKL  345 (367)
T ss_pred             cCCCCcHHHHHHHHHHHHcCCCCcccceeEEecH
Confidence               1124789999999999998863  6666654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=1.8e-31  Score=236.11  Aligned_cols=275  Identities=32%  Similarity=0.443  Sum_probs=221.6

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++..++++ . +.+. +.+.|.+.+++|+|++.++++|++|.....|.++ ...+.|.++|+|++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~-~~~~~~~~~g~~~~G~v~~~G~~v~   76 (338)
T cd08254           1 MKAWRFHKGSKG-L-LVLE-EVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP-TLTKLPLTLGHEIAGTVVEVGAGVT   76 (338)
T ss_pred             CeeEEEecCCCC-c-eEEe-ccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCc-ccCCCCEeccccccEEEEEECCCCc
Confidence            999999999987 3 6777 7788889999999999999999999999888764 2234577899999999999999999


Q ss_pred             CCCCCCEEEEecCc------------------cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273           81 KFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (284)
                      .+++||+|++.+..                  ....+....|+|++|+.++.+.++++|+++++.+++.++.++.|||++
T Consensus        77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~  156 (338)
T cd08254          77 NFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHA  156 (338)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence            99999999872210                  001112236899999999999999999999999999999999999999


Q ss_pred             HH-hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-----CCCccc
Q 023273          143 LE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFD  216 (284)
Q Consensus       143 l~-~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~d  216 (284)
                      +. ..+++++++|+|.| +|.+|.+++++|+.+ |+++++++.++++.+.++++|.+.+++........     ..+++|
T Consensus       157 l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~-G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D  234 (338)
T cd08254         157 VVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAM-GAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFD  234 (338)
T ss_pred             HHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCce
Confidence            84 57799999999986 799999999999995 99999999999999999999988877765433221     246799


Q ss_pred             EEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee------------EEEeccHHHHHHHHHHHHCCCeeEeecccc
Q 023273          217 VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS------------FVLTSDGSILEKLNPYFESGKVKAIIDPKG  281 (284)
Q Consensus       217 ~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~g~i~~~i~~~~  281 (284)
                      +++||.|.   ...++++|+++|+++.++.......++            .......+.++.+++++++|.|++. .+++
T Consensus       235 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-~~~~  313 (338)
T cd08254         235 VIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQ-VETR  313 (338)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCccc-ceeE
Confidence            99999974   478999999999999997543211111            1112236789999999999998876 4555


Q ss_pred             c
Q 023273          282 L  282 (284)
Q Consensus       282 ~  282 (284)
                      +
T Consensus       314 ~  314 (338)
T cd08254         314 P  314 (338)
T ss_pred             c
Confidence            5

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.8e-32  Score=238.83  Aligned_cols=275  Identities=29%  Similarity=0.431  Sum_probs=221.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..++.+   ++++ +.+.|.+.++|++|++.++++|++|+....|.++.  ...|.++|+|++|+|+.+|++++
T Consensus         1 m~a~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~~G~~~~   74 (345)
T cd08260           1 MRAAVYEEFGEP---LEIR-EVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD--VTLPHVPGHEFAGVVVEVGEDVS   74 (345)
T ss_pred             CeeEEEecCCCC---cEEE-EccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC--CCCCeeeccceeEEEEEECCCCc
Confidence            999999988876   7888 78889999999999999999999999988886542  34578899999999999999999


Q ss_pred             CCCCCCEEEEecCc-c-----------------ccCCCCCCCceeeEEeeecC--ceeeCCCCCCHHhhhcccchHHHHH
Q 023273           81 KFKVGDEVYGDINE-K-----------------ALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLATETAY  140 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~-~-----------------~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~ta~  140 (284)
                      .|++||+|++.... +                 ...+...+|+|++|++++.+  .++++|+++++++++.++.+++|||
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~  154 (345)
T cd08260          75 RWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAF  154 (345)
T ss_pred             cCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHH
Confidence            99999999872100 0                 00011236899999999975  8999999999999999999999999


Q ss_pred             HHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC-ccccc----C-CC
Q 023273          141 EGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIED----L-PE  213 (284)
Q Consensus       141 ~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~----~-~~  213 (284)
                      +++ ...++.++++|+|+| +|.+|++++++|+.. |.++++++.++++.+.++++|.+.+++.+. .++.+    . .+
T Consensus       155 ~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~  232 (345)
T cd08260         155 RALVHQARVKPGEWVAVHG-CGGVGLSAVMIASAL-GARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGG  232 (345)
T ss_pred             HHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCC
Confidence            998 567889999999999 799999999999995 999999999999999999999988888765 33322    1 23


Q ss_pred             cccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC---ce----------eEEE--eccHHHHHHHHHHHHCCCeeE
Q 023273          214 KFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP---AS----------SFVL--TSDGSILEKLNPYFESGKVKA  275 (284)
Q Consensus       214 ~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~---~~----------~~~~--~~~~~~~~~~~~~~~~g~i~~  275 (284)
                      ++|++||++|+   ....+++|+++|+++.+|......   .+          .+..  ....+.+++++++++++.+.+
T Consensus       233 ~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~  312 (345)
T cd08260         233 GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLDP  312 (345)
T ss_pred             CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCCh
Confidence            79999999984   478899999999999998653211   11          1111  124578999999999999875


Q ss_pred             e--ecccccC
Q 023273          276 I--IDPKGLL  283 (284)
Q Consensus       276 ~--i~~~~~~  283 (284)
                      .  +.+++++
T Consensus       313 ~~~~~~~~~~  322 (345)
T cd08260         313 EPLVGRTISL  322 (345)
T ss_pred             hhheeEEecH
Confidence            3  5666653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.3e-32  Score=237.13  Aligned_cols=264  Identities=27%  Similarity=0.365  Sum_probs=209.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..+++    ++++ +.+.|+++++||+|++.++++|++|.....|.++     .|.++|||++|+|+++|++  
T Consensus         1 ~~a~~~~~~~~----~~~~-~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~-----~~~~~G~e~~G~Vv~~G~~--   68 (319)
T cd08242           1 MKALVLDGGLD----LRVE-DLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP-----FPGVPGHEFVGIVEEGPEA--   68 (319)
T ss_pred             CeeEEEeCCCc----EEEE-ECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC-----CCCccCceEEEEEEEeCCC--
Confidence            89999997654    6998 8899999999999999999999999999888652     5678999999999999988  


Q ss_pred             CCCCCCEEEEecCc------------------cccCCC-CCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           81 KFKVGDEVYGDINE------------------KALDHP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~------------------~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                       +++||+|...+..                  ...... ..+|+|++|++++.+.++++|++++.++++.+ ....++|.
T Consensus        69 -~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~  146 (319)
T cd08242          69 -ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE  146 (319)
T ss_pred             -CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH
Confidence             6799999753211                  000111 23689999999999999999999998877754 44556777


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeC
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~  221 (284)
                      +++..+++++++|+|+| +|.+|.+++++|+.+ |.++++++.++++.+.++++|++.+++++..   ...+++|++||+
T Consensus       147 ~~~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~d~vid~  221 (319)
T cd08242         147 ILEQVPITPGDKVAVLG-DGKLGLLIAQVLALT-GPDVVLVGRHSEKLALARRLGVETVLPDEAE---SEGGGFDVVVEA  221 (319)
T ss_pred             HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCcEEeCcccc---ccCCCCCEEEEC
Confidence            77788899999999997 799999999999996 9999999999999999999998877776432   224679999999


Q ss_pred             CCC---cHHHHHhhccCCEEEEEcCCCCCCceeE--------E-EeccHHHHHHHHHHHHCCCe--eEeecccccC
Q 023273          222 VGQ---CDKALKAVKEGGRVVSIIGSVTPPASSF--------V-LTSDGSILEKLNPYFESGKV--KAIIDPKGLL  283 (284)
Q Consensus       222 ~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~g~i--~~~i~~~~~~  283 (284)
                      +|+   ...++++++++|+++..+.......++.        . .......++++++++++|+|  .+.++++||+
T Consensus       222 ~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  297 (319)
T cd08242         222 TGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGPFAPALRLLRKGLVDVDPLITAVYPL  297 (319)
T ss_pred             CCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecccHHHHHHHHHcCCCChhhceEEEEeH
Confidence            985   4788999999999998765332211111        0 11112248889999999999  5668888875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=9.8e-32  Score=240.54  Aligned_cols=274  Identities=28%  Similarity=0.402  Sum_probs=220.9

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..++.+   ++++ +.+.|+++++||+|++.++++|++|+..+.|.++   ..+|.++|+|++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v~   73 (363)
T cd08279           1 MRAAVLHEVGKP---LEIE-EVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP---APLPAVLGHEGAGVVEEVGPGVT   73 (363)
T ss_pred             CeEEEEecCCCC---ceEE-EeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC---CCCCccccccceEEEEEeCCCcc
Confidence            999999998766   7888 7889999999999999999999999998888654   34577899999999999999999


Q ss_pred             CCCCCCEEEEecCc----cc----------cC------------------------CCCCCCceeeEEeeecCceeeCCC
Q 023273           81 KFKVGDEVYGDINE----KA----------LD------------------------HPKRNGSLAEYTAVEENLLALKPK  122 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~----~~----------~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~  122 (284)
                      .+++||+|++.+..    +.          ..                        .....|+|++|+.++.+.++++|+
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~  153 (363)
T cd08279          74 GVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDD  153 (363)
T ss_pred             ccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCC
Confidence            99999999984210    00          00                        002358999999999999999999


Q ss_pred             CCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEE
Q 023273          123 NLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLA  200 (284)
Q Consensus       123 ~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~  200 (284)
                      ++++++++.+++++.|||.++ ...++.++++|+|+| +|.+|.+++++|+.+ |.+ +++++.++++.+.++++|.+++
T Consensus       154 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~-G~~~Vi~~~~~~~~~~~~~~~g~~~v  231 (363)
T cd08279         154 DIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIA-GASRIIAVDPVPEKLELARRFGATHT  231 (363)
T ss_pred             CCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEEcCCHHHHHHHHHhCCeEE
Confidence            999999999999999999987 568899999999996 799999999999996 886 8888899999999999998888


Q ss_pred             eeCCCccccc----C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC------------ceeE---EEe-
Q 023273          201 IDYTKENIED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP------------ASSF---VLT-  255 (284)
Q Consensus       201 ~~~~~~~~~~----~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~------------~~~~---~~~-  255 (284)
                      ++++...+..    .  .+++|++||++++   ...++++|+++|+++.++......            ...+   .+. 
T Consensus       232 v~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (363)
T cd08279         232 VNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGS  311 (363)
T ss_pred             eCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecC
Confidence            8776533221    1  4679999999984   478899999999999987533110            1110   111 


Q ss_pred             -ccHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273          256 -SDGSILEKLNPYFESGKVKA--IIDPKGLL  283 (284)
Q Consensus       256 -~~~~~~~~~~~~~~~g~i~~--~i~~~~~~  283 (284)
                       ...+.+++++++++++.+++  .+.++|++
T Consensus       312 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~  342 (363)
T cd08279         312 ANPRRDIPRLLDLYRAGRLKLDELVTRRYSL  342 (363)
T ss_pred             cCcHHHHHHHHHHHHcCCCCcceeEEEEEcH
Confidence             23578999999999999876  36666653

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=4.7e-32  Score=240.43  Aligned_cols=273  Identities=35%  Similarity=0.490  Sum_probs=217.9

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..++ + ..++++ +.+.|+|+++||+|++.++++|++|+....+.+   ....|.++|||++|+|+.+|++++
T Consensus         1 m~a~~~~~~~-~-~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~~v~   74 (339)
T cd08249           1 QKAAVLTGPG-G-GLLVVV-DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF---IPSYPAILGCDFAGTVVEVGSGVT   74 (339)
T ss_pred             CceEEeccCC-C-Cccccc-CCCCCCCCCCEEEEEEEEEEcCchheeeeeccc---ccCCCceeeeeeeEEEEEeCCCcC
Confidence            9999999996 3 457888 889999999999999999999999988765543   123467899999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hccc----------C
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAF----------S  149 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~----------~  149 (284)
                      .+++||+|++....... +...+|+|++|++++.+.++++|+++++.+++.+++.+.|||+++. ..++          .
T Consensus        75 ~~~~Gd~V~~~~~~~~~-~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~  153 (339)
T cd08249          75 RFKVGDRVAGFVHGGNP-NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPAS  153 (339)
T ss_pred             cCCCCCEEEEEeccccC-CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCC
Confidence            99999999987521100 1123689999999999999999999999999999999999999984 4433          7


Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-----CCCcccEEEeCCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g~  224 (284)
                      ++++++|+|++|.+|++++++|+.+ |++++.++ ++++.+.++++|.+.++++....+.+     ..+++|++||++|+
T Consensus       154 ~~~~vlI~ga~g~vg~~~~~~a~~~-G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~  231 (339)
T cd08249         154 KGKPVLIWGGSSSVGTLAIQLAKLA-GYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCIST  231 (339)
T ss_pred             CCCEEEEEcChhHHHHHHHHHHHHc-CCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeecc
Confidence            8999999999999999999999996 99998887 56888999999998888876544322     14679999999885


Q ss_pred             ---cHHHHHhhcc--CCEEEEEcCCCCCC----ceeE---EEe-----------ccHHHHHHHHHHHHCCCeeEeecccc
Q 023273          225 ---CDKALKAVKE--GGRVVSIIGSVTPP----ASSF---VLT-----------SDGSILEKLNPYFESGKVKAIIDPKG  281 (284)
Q Consensus       225 ---~~~~~~~l~~--~G~~v~~g~~~~~~----~~~~---~~~-----------~~~~~~~~~~~~~~~g~i~~~i~~~~  281 (284)
                         ...+++++++  +|+++.++......    ....   ...           .....+++++++++++++.+....++
T Consensus       232 ~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  311 (339)
T cd08249         232 PESAQLCAEALGRSGGGKLVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVV  311 (339)
T ss_pred             chHHHHHHHHHhccCCCEEEEecCCCccccCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceec
Confidence               4789999999  99999998654221    1111   110           12356788999999999987654555


Q ss_pred             c
Q 023273          282 L  282 (284)
Q Consensus       282 ~  282 (284)
                      +
T Consensus       312 ~  312 (339)
T cd08249         312 E  312 (339)
T ss_pred             C
Confidence            4

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.2e-31  Score=233.99  Aligned_cols=273  Identities=30%  Similarity=0.354  Sum_probs=218.8

Q ss_pred             CeEEEEcccCCCc-cceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQ-SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~-~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      ||++++.+++.+. ..+++. +.+.|.+.++||+||+.++++|++|++.+.|.++.  ...|.++|||++|+|+.+|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~vG~~v   77 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLT-EVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP--PKLPLIPGHEIVGRVEAVGPGV   77 (329)
T ss_pred             CeEEEEecCCCCCCCCceEE-eccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC--CCCCccccccccEEEEEECCCC
Confidence            8999999888421 136777 67778899999999999999999999998887643  3457789999999999999999


Q ss_pred             CCCCCCCEEEEecC-----cc--------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHH
Q 023273           80 KKFKVGDEVYGDIN-----EK--------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY  140 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~-----~~--------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  140 (284)
                      +++++||+|++.+.     ++              ...+...+|+|++|+.++.+.++++|+++++.+++.+++++.|||
T Consensus        78 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~  157 (329)
T cd08298          78 TRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGY  157 (329)
T ss_pred             CCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHH
Confidence            99999999976321     00              001112368999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEe
Q 023273          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFD  220 (284)
Q Consensus       141 ~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid  220 (284)
                      +++..++++++++++|+| +|++|++++++++.. |.++++++.++++.+.++++|.+.+++....    ..+++|++++
T Consensus       158 ~~~~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~vD~vi~  231 (329)
T cd08298         158 RALKLAGLKPGQRLGLYG-FGASAHLALQIARYQ-GAEVFAFTRSGEHQELARELGADWAGDSDDL----PPEPLDAAII  231 (329)
T ss_pred             HHHHhhCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEcCChHHHHHHHHhCCcEEeccCcc----CCCcccEEEE
Confidence            999888999999999997 899999999999995 8999999999999999999998777766432    2357999999


Q ss_pred             CCCC---cHHHHHhhccCCEEEEEcCCCC-CCceeE-------E----EeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          221 AVGQ---CDKALKAVKEGGRVVSIIGSVT-PPASSF-------V----LTSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       221 ~~g~---~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-------~----~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +++.   .+.++++++++|+++.+|.... ...+++       .    .....+.+++++++++++.+++. .++|++
T Consensus       232 ~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~-~~~~~~  308 (329)
T cd08298         232 FAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYELLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPE-VETYPL  308 (329)
T ss_pred             cCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhhhhCceEEEEecCCCHHHHHHHHHHHHcCCCCce-EEEEeH
Confidence            8663   4889999999999998874321 111111       0    12345678999999999998874 466664

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.7e-31  Score=236.62  Aligned_cols=272  Identities=31%  Similarity=0.426  Sum_probs=217.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||++++.++.    +++. +.+.|++.++|++|++.++++|+.|+....|.++..  .+|.++|+|++|+|+++|++++
T Consensus         1 ~~a~~~~~~~~----~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~--~~~~~~g~e~~G~V~~~G~~v~   73 (337)
T cd08261           1 MKALVCEKPGR----LEVV-DIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA--SYPRILGHELSGEVVEVGEGVA   73 (337)
T ss_pred             CeEEEEeCCCc----eEEE-ECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC--CCCcccccccEEEEEEeCCCCC
Confidence            89999998764    5888 789999999999999999999999999888866432  4477899999999999999999


Q ss_pred             CCCCCCEEEEecC-------ccccC-----------CCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273           81 KFKVGDEVYGDIN-------EKALD-----------HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (284)
Q Consensus        81 ~~~~Gd~V~~~~~-------~~~~~-----------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (284)
                      .|++||+|++...       .+...           +....|+|++|+.++.+ ++++|+++++++++++ ..+.+++++
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~  151 (337)
T cd08261          74 GLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHA  151 (337)
T ss_pred             CCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHH
Confidence            9999999987421       00000           01136899999999999 9999999999888776 567788888


Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCccc
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFD  216 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d  216 (284)
                      +...++.++++|||+| +|.+|.+++++|+.+ |.++++++.++++.+.+++++.++++++....+..    .  .+++|
T Consensus       152 ~~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~-g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd  229 (337)
T cd08261         152 VRRAGVTAGDTVLVVG-AGPIGLGVIQVAKAR-GARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGAD  229 (337)
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCC
Confidence            8778899999999997 799999999999996 99999999999999999999998888876543222    1  35699


Q ss_pred             EEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC----------ceeEEE--eccHHHHHHHHHHHHCCCeeE--eecc
Q 023273          217 VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL--TSDGSILEKLNPYFESGKVKA--IIDP  279 (284)
Q Consensus       217 ~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~g~i~~--~i~~  279 (284)
                      ++||+.|+   ...++++|+++|+++.++....+.          .+.+..  ....+.++++++++++|.+++  .+.+
T Consensus       230 ~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~  309 (337)
T cd08261         230 VVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITH  309 (337)
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEE
Confidence            99999875   478899999999999987543221          111111  123568899999999999987  6666


Q ss_pred             cccC
Q 023273          280 KGLL  283 (284)
Q Consensus       280 ~~~~  283 (284)
                      ++++
T Consensus       310 ~~~~  313 (337)
T cd08261         310 RFPF  313 (337)
T ss_pred             EeeH
Confidence            6653

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=2.8e-31  Score=235.61  Aligned_cols=272  Identities=29%  Similarity=0.416  Sum_probs=216.6

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||+++++.++.    +.++ +.+.|++.+++|+|++.++++|++|+....|.++  ....|.++|+|++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~----~~~~-~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~--~~~~~~~~g~~~~G~V~~~G~~v~   73 (343)
T cd08235           1 MKAAVLHGPND----VRLE-EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT--DLKPPRILGHEIAGEIVEVGDGVT   73 (343)
T ss_pred             CeEEEEecCCc----eEEE-EccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc--cCCCCcccccceEEEEEeeCCCCC
Confidence            89999998775    5888 7888889999999999999999999998887653  223467899999999999999999


Q ss_pred             CCCCCCEEEEecCcc-----------c-------cCCCCCCCceeeEEeeecCc-----eeeCCCCCCHHhhhcccchHH
Q 023273           81 KFKVGDEVYGDINEK-----------A-------LDHPKRNGSLAEYTAVEENL-----LALKPKNLSFVEAASLPLATE  137 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~-----------~-------~~~~~~~g~~~~~~~~~~~~-----~~~ip~~~~~~~aa~~~~~~~  137 (284)
                      .|++||+|++.....           .       ..+....|+|++|++++.+.     ++++|+++++.+++.+ ..+.
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~  152 (343)
T cd08235          74 GFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLA  152 (343)
T ss_pred             CCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHH
Confidence            999999999863200           0       00112469999999999988     9999999999888766 7888


Q ss_pred             HHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C-
Q 023273          138 TAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED----L-  211 (284)
Q Consensus       138 ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~-  211 (284)
                      +||+++...++++|++|+|+| +|.+|.+++++|+.. |.+ +++++.++++.+.+++++.+.+++++...+..    . 
T Consensus       153 ~a~~~l~~~~~~~g~~VlV~g-~g~vg~~~~~la~~~-g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~  230 (343)
T cd08235         153 CCINAQRKAGIKPGDTVLVIG-AGPIGLLHAMLAKAS-GARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELT  230 (343)
T ss_pred             HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHh
Confidence            999999766899999999997 799999999999995 888 88888899999988889988888776544322    1 


Q ss_pred             -CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCC--Cc----------eeE--EEeccHHHHHHHHHHHHCCCe
Q 023273          212 -PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP--PA----------SSF--VLTSDGSILEKLNPYFESGKV  273 (284)
Q Consensus       212 -~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~--~~----------~~~--~~~~~~~~~~~~~~~~~~g~i  273 (284)
                       .+++|++||++++   ...++++|+++|+++.++.....  ..          +.+  ......+.+++++++++++.+
T Consensus       231 ~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l  310 (343)
T cd08235         231 DGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKI  310 (343)
T ss_pred             CCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCC
Confidence             3569999999884   47889999999999998764321  11          111  112345788999999999998


Q ss_pred             eE--eeccccc
Q 023273          274 KA--IIDPKGL  282 (284)
Q Consensus       274 ~~--~i~~~~~  282 (284)
                      ++  .+.++|+
T Consensus       311 ~~~~~~~~~~~  321 (343)
T cd08235         311 DVKDLITHRFP  321 (343)
T ss_pred             ChHHheeeEee
Confidence            63  4555555

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=2e-31  Score=236.68  Aligned_cols=271  Identities=29%  Similarity=0.412  Sum_probs=216.0

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCC-CCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~-~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      ||++++..++.    ++++ +.+.|+|. ++||+|++.++++|++|+....|.++   ..+|.++|+|++|+|+++|+++
T Consensus         1 ~~a~~~~~~~~----~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v   72 (344)
T cd08284           1 MKAVVFKGPGD----VRVE-EVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP---STPGFVLGHEFVGEVVEVGPEV   72 (344)
T ss_pred             CeeEEEecCCC----ceEE-eccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC---CCCCcccccceEEEEEeeCCCc
Confidence            89999987653    6888 88989885 99999999999999999998888654   2346789999999999999999


Q ss_pred             CCCCCCCEEEEecCcc----c---------------c---CCCCCCCceeeEEeeecC--ceeeCCCCCCHHhhhcccch
Q 023273           80 KKFKVGDEVYGDINEK----A---------------L---DHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLA  135 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~----~---------------~---~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~  135 (284)
                      +++++||+|++.+...    .               .   .....+|+|++|+.++.+  .++++|++++++++++++++
T Consensus        73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~  152 (344)
T cd08284          73 RTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDI  152 (344)
T ss_pred             cccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCc
Confidence            9999999999864100    0               0   001125899999999865  99999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----
Q 023273          136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED----  210 (284)
Q Consensus       136 ~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----  210 (284)
                      ++|||+++...+..++++|+|+| +|.+|++++++|+.+ |+ ++++++.++++.+.++++|.. .++.+..++..    
T Consensus       153 ~~ta~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~-g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~  229 (344)
T cd08284         153 LPTGYFGAKRAQVRPGDTVAVIG-CGPVGLCAVLSAQVL-GAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVRE  229 (344)
T ss_pred             hHHHHhhhHhcCCccCCEEEEEC-CcHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHH
Confidence            99999999778889999999997 899999999999995 86 788888888899988999865 45544332221    


Q ss_pred             C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCC-----------CceeEE--EeccHHHHHHHHHHHHCCC
Q 023273          211 L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP-----------PASSFV--LTSDGSILEKLNPYFESGK  272 (284)
Q Consensus       211 ~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~--~~~~~~~~~~~~~~~~~g~  272 (284)
                      .  .+++|++||++|+   ...++++++++|+++.+|.....           ....+.  .....+.+++++++++++.
T Consensus       230 ~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (344)
T cd08284         230 ATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGR  309 (344)
T ss_pred             HhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCC
Confidence            1  3579999999984   47889999999999999865411           122222  2235678999999999999


Q ss_pred             eeE--eeccccc
Q 023273          273 VKA--IIDPKGL  282 (284)
Q Consensus       273 i~~--~i~~~~~  282 (284)
                      +++  ++.++|+
T Consensus       310 i~~~~~~~~~~~  321 (344)
T cd08284         310 LDLEFLIDHRMP  321 (344)
T ss_pred             CChHHhEeeeec
Confidence            875  3566665

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=3.4e-31  Score=233.06  Aligned_cols=235  Identities=30%  Similarity=0.378  Sum_probs=196.1

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..++++ +.++++ +.|.|.|+++||+|++.++++|++|+..+.|.++. ...+|.++|||++|+|+++  +++
T Consensus         1 ~~a~~~~~~~~~-~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~--~~~   75 (325)
T cd05280           1 FKALVVEEQDGG-VSLFLR-TLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGV-TRNYPHTPGIDAAGTVVSS--DDP   75 (325)
T ss_pred             CceEEEcccCCC-CcceEE-eCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCC-CCCCCCccCcccEEEEEEe--CCC
Confidence            999999999874 458998 88999999999999999999999999998887532 2345778999999999998  456


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHh---cccC-CCCEEEE
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER---SAFS-AGKSILV  156 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~---~~~~-~g~~vlI  156 (284)
                      .+++||+|++....   .+...+|+|++|+.++.+.++++|+++++.+++.+++.+.|+|.++..   .++. .+++|+|
T Consensus        76 ~~~~Gd~V~~~~~~---~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI  152 (325)
T cd05280          76 RFREGDEVLVTGYD---LGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLV  152 (325)
T ss_pred             CCCCCCEEEEcccc---cCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEE
Confidence            89999999986421   112236899999999999999999999999999999999999998743   2335 3579999


Q ss_pred             EcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc--ccc--CCCcccEEEeCCCC--cHHHHH
Q 023273          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN--IED--LPEKFDVVFDAVGQ--CDKALK  230 (284)
Q Consensus       157 ~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~--~~~~~d~vid~~g~--~~~~~~  230 (284)
                      +|++|.+|++++++|+.+ |+++++++.++++.+.++++|.+.+++.+...  ...  ..+++|++||++|+  ...+++
T Consensus       153 ~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~  231 (325)
T cd05280         153 TGATGGVGSIAVAILAKL-GYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLANLLK  231 (325)
T ss_pred             ECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHHHHHHHH
Confidence            998899999999999996 99999999999999999999998888765321  111  13579999999985  588999


Q ss_pred             hhccCCEEEEEcCC
Q 023273          231 AVKEGGRVVSIIGS  244 (284)
Q Consensus       231 ~l~~~G~~v~~g~~  244 (284)
                      +++++|+++.+|..
T Consensus       232 ~l~~~g~~v~~g~~  245 (325)
T cd05280         232 QTKYGGVVASCGNA  245 (325)
T ss_pred             hhcCCCEEEEEecC
Confidence            99999999999864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.9e-31  Score=231.21  Aligned_cols=278  Identities=33%  Similarity=0.433  Sum_probs=223.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++...+.. +.+++. +.+.|.++++|++|++.++++|++|++...|.++.. ...|.++|||++|+|+++|+++.
T Consensus         1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~G~~~~   77 (336)
T cd08276           1 MKAWRLSGGGGL-DNLKLV-EEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPP-VKDPLIPLSDGAGEVVAVGEGVT   77 (336)
T ss_pred             CeEEEEeccCCC-cceEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCC-CCCCcccccceeEEEEEeCCCCc
Confidence            999999987654 557887 677788899999999999999999999888765422 23577899999999999999999


Q ss_pred             CCCCCCEEEEecCc------------cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-Hhcc
Q 023273           81 KFKVGDEVYGDINE------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSA  147 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~  147 (284)
                      +|++||+|++....            ....+.+.+|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++ ....
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~  157 (336)
T cd08276          78 RFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGP  157 (336)
T ss_pred             CCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcC
Confidence            99999999986410            0011223468999999999999999999999999999999999999998 4578


Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC-ccccc----C--CCcccEEEe
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIED----L--PEKFDVVFD  220 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~----~--~~~~d~vid  220 (284)
                      +++|++|+|+| +|++|++++++|+++ |+++++++.++++.+.+++++.+.+++... ..+..    .  .+++|++||
T Consensus       158 ~~~g~~vli~g-~g~~g~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~  235 (336)
T cd08276         158 LKPGDTVLVQG-TGGVSLFALQFAKAA-GARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVE  235 (336)
T ss_pred             CCCCCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEE
Confidence            99999999996 899999999999996 999999999999999998889888887654 32211    1  358999999


Q ss_pred             CCCC--cHHHHHhhccCCEEEEEcCCCCC-----------CceeEE--EeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          221 AVGQ--CDKALKAVKEGGRVVSIIGSVTP-----------PASSFV--LTSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       221 ~~g~--~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~--~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +++.  ...++++++++|+++.+|....+           ....+.  .....+.+++++++++++.+.+.+.+++++
T Consensus       236 ~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~  313 (336)
T cd08276         236 VGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPVIDRVFPF  313 (336)
T ss_pred             CCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcccccCcEEeH
Confidence            9875  47899999999999999864321           111111  112467899999999999988776676653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=2.8e-31  Score=235.90  Aligned_cols=273  Identities=25%  Similarity=0.290  Sum_probs=212.1

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      ||++++..++.    +++. +.|.|+| +++||+|++.++++|++|+..+.|.++   ...|.++|||++|+|+++|+++
T Consensus         1 m~~~~~~~~~~----~~~~-~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v   72 (345)
T cd08287           1 MRATVIHGPGD----IRVE-EVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP---TRAPAPIGHEFVGVVEEVGSEV   72 (345)
T ss_pred             CceeEEecCCc----eeEE-eCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC---CCCCcccccceEEEEEEeCCCC
Confidence            89999987665    5888 7898986 899999999999999999998888654   2347889999999999999999


Q ss_pred             CCCCCCCEEEE-ecCcc-----------------ccCCCCCCCceeeEEeeecC--ceeeCCCCCCHHhhh-----cccc
Q 023273           80 KKFKVGDEVYG-DINEK-----------------ALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAA-----SLPL  134 (284)
Q Consensus        80 ~~~~~Gd~V~~-~~~~~-----------------~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa-----~~~~  134 (284)
                      .++++||+|++ ....+                 ...+...+|+|++|+.++.+  .++++|++++++.+.     ++..
T Consensus        73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~  152 (345)
T cd08287          73 TSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSD  152 (345)
T ss_pred             CccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhc
Confidence            99999999987 22110                 01112345999999999975  999999999872211     2235


Q ss_pred             hHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccccc---
Q 023273          135 ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED---  210 (284)
Q Consensus       135 ~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---  210 (284)
                      .+.|||+++...++.++++|+|.| +|.+|++++++|++. |.+ ++++++++++.+.++++|++.++++....+.+   
T Consensus       153 ~~~~a~~~~~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~  230 (345)
T cd08287         153 VMGTGHHAAVSAGVRPGSTVVVVG-DGAVGLCAVLAAKRL-GAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVR  230 (345)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHH
Confidence            678899998778899999999977 899999999999996 886 67777788888888999998888876543222   


Q ss_pred             -C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCce----------eEEE--eccHHHHHHHHHHHHCCC
Q 023273          211 -L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SFVL--TSDGSILEKLNPYFESGK  272 (284)
Q Consensus       211 -~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~~~--~~~~~~~~~~~~~~~~g~  272 (284)
                       .  ..++|+++|++|+   ...++++++++|+++.++.+..+..+          .+..  ....+.+.++++++++|.
T Consensus       231 ~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (345)
T cd08287         231 ELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGR  310 (345)
T ss_pred             HhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCC
Confidence             1  3579999999975   48899999999999998765422111          1111  123578999999999999


Q ss_pred             eeE--eecccccC
Q 023273          273 VKA--IIDPKGLL  283 (284)
Q Consensus       273 i~~--~i~~~~~~  283 (284)
                      +++  .+++++++
T Consensus       311 l~~~~~~~~~~~l  323 (345)
T cd08287         311 INPGRVFDLTLPL  323 (345)
T ss_pred             CCHHHhEEeeecH
Confidence            886  35566653

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=2.2e-31  Score=239.31  Aligned_cols=272  Identities=26%  Similarity=0.334  Sum_probs=213.6

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      ||++++..++.    ++++ +.|.|++ .++|++|++.++++|++|++.+.|.++   ..+|.++|||++|+|+++|+++
T Consensus         1 m~~~~~~~~~~----~~~~-~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~---~~~p~~~g~e~~G~V~~vG~~v   72 (375)
T cd08282           1 MKAVVYGGPGN----VAVE-DVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG---AEPGLVLGHEAMGEVEEVGSAV   72 (375)
T ss_pred             CceEEEecCCc----eeEE-eCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC---CCCCceeccccEEEEEEeCCCC
Confidence            89999987764    6888 7898986 799999999999999999999988764   3457899999999999999999


Q ss_pred             CCCCCCCEEEEecC----cc---ccC---------------------CCCCCCceeeEEeeecC--ceeeCCCCCCHH--
Q 023273           80 KKFKVGDEVYGDIN----EK---ALD---------------------HPKRNGSLAEYTAVEEN--LLALKPKNLSFV--  127 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~----~~---~~~---------------------~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~--  127 (284)
                      +.+++||+|++...    .+   ...                     ....+|+|++|+++|.+  .++++|++++++  
T Consensus        73 ~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~  152 (375)
T cd08282          73 ESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEK  152 (375)
T ss_pred             CcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhh
Confidence            99999999987321    00   000                     01125899999999976  899999999988  


Q ss_pred             -hhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCC
Q 023273          128 -EAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTK  205 (284)
Q Consensus       128 -~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~  205 (284)
                       +++.++.+++|||+++...++.+|++|+|.| +|.+|++++++|+++ |. ++++++++++|.+.++++|+. .++++.
T Consensus       153 ~~~a~~~~~~~ta~~a~~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~  229 (375)
T cd08282         153 DDYLMLSDIFPTGWHGLELAGVQPGDTVAVFG-AGPVGLMAAYSAILR-GASRVYVVDHVPERLDLAESIGAI-PIDFSD  229 (375)
T ss_pred             hheeeecchHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCe-EeccCc
Confidence             4677788899999999778899999999976 799999999999996 86 788888899999999999974 555543


Q ss_pred             ccccc-----CCCcccEEEeCCCC--------------cHHHHHhhccCCEEEEEcCCCCC-------------CceeE-
Q 023273          206 ENIED-----LPEKFDVVFDAVGQ--------------CDKALKAVKEGGRVVSIIGSVTP-------------PASSF-  252 (284)
Q Consensus       206 ~~~~~-----~~~~~d~vid~~g~--------------~~~~~~~l~~~G~~v~~g~~~~~-------------~~~~~-  252 (284)
                      ..+..     ..+++|++|||+|.              ...++++++++|+++.+|.....             ..+++ 
T Consensus       230 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  309 (375)
T cd08282         230 GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFG  309 (375)
T ss_pred             ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHH
Confidence            32211     13479999999874              36889999999999888754311             00110 


Q ss_pred             -------EE----eccHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273          253 -------VL----TSDGSILEKLNPYFESGKVKA--IIDPKGLL  283 (284)
Q Consensus       253 -------~~----~~~~~~~~~~~~~~~~g~i~~--~i~~~~~~  283 (284)
                             ..    ....+.++.++++++++.+++  .++++||+
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l  353 (375)
T cd08282         310 LLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISL  353 (375)
T ss_pred             HHHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeH
Confidence                   00    013467889999999999987  37888875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=6.5e-31  Score=230.46  Aligned_cols=273  Identities=27%  Similarity=0.360  Sum_probs=218.9

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++...+.. ..+++. +.+.|++.++|++|++.++++|++|+....|.++  ....|.++|||++|+|+++|+  .
T Consensus         1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~--~   74 (320)
T cd08243           1 MKAIVIEQPGGP-EVLKLR-EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP--SVKFPRVLGIEAVGEVEEAPG--G   74 (320)
T ss_pred             CeEEEEcCCCCc-cceEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCccccceeEEEEEEecC--C
Confidence            899999887765 456777 6677788999999999999999999998887653  234567899999999999995  5


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~ga  159 (284)
                      .+++||+|++...+.   +....|+|++|+.++.+.++++|+++++.+++.+++++.|||+++. ..++.+|++|+|+|+
T Consensus        75 ~~~~Gd~V~~~~~~~---~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga  151 (320)
T cd08243          75 TFTPGQRVATAMGGM---GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGG  151 (320)
T ss_pred             CCCCCCEEEEecCCC---CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            799999999875321   1223589999999999999999999999999999999999999984 567899999999999


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc---cccCCCcccEEEeCCCC--cHHHHHhhcc
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IEDLPEKFDVVFDAVGQ--CDKALKAVKE  234 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~d~vid~~g~--~~~~~~~l~~  234 (284)
                      +|.+|++++++|+++ |+++++++.++++.+.++++|.+.+++.....   +...++++|++||++|+  ...++++|++
T Consensus       152 ~g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~~~~~~~~~l~~  230 (320)
T cd08243         152 TSSVGLAALKLAKAL-GATVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTATLKDSLRHLRP  230 (320)
T ss_pred             CChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEecCccHHHHHHHhCCCceEEEECCChHHHHHHHHHhcc
Confidence            999999999999996 99999999999999999999987776542211   11124689999999986  4788999999


Q ss_pred             CCEEEEEcCCCCC---------------CceeEEEe----ccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          235 GGRVVSIIGSVTP---------------PASSFVLT----SDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       235 ~G~~v~~g~~~~~---------------~~~~~~~~----~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +|+++.+|.....               ....+...    ...+.++.++++++++.+++.+.++|++
T Consensus       231 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  298 (320)
T cd08243         231 GGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKVFTF  298 (320)
T ss_pred             CCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecccccEEcH
Confidence            9999998863211               01111111    1135688899999999998877777764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=2.3e-31  Score=233.67  Aligned_cols=258  Identities=43%  Similarity=0.605  Sum_probs=204.1

Q ss_pred             eEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCC--CCCCcccccceeEE---EEEeC-CCCCCCCCCCEEE
Q 023273           16 LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD--SPLPTIPGYDVAGV---VEKVG-SQVKKFKVGDEVY   89 (284)
Q Consensus        16 ~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~--~~~p~~~G~e~~G~---V~~vG-~~~~~~~~Gd~V~   89 (284)
                      +.+.++.+.|+|.+++++|++.++++|+.|+....|.++...  ..+|.+++.++.|+   +...| ..+.....||++.
T Consensus        19 ~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~   98 (347)
T KOG1198|consen   19 VLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVV   98 (347)
T ss_pred             eEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEe
Confidence            334337889999999999999999999999999988764332  25665555554444   44444 2234455666555


Q ss_pred             EecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-Hhc------ccCCCCEEEEEcCCch
Q 023273           90 GDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERS------AFSAGKSILVLGGAGG  162 (284)
Q Consensus        90 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~------~~~~g~~vlI~ga~g~  162 (284)
                      ...         ..|+|++|.++|...++++|+++++.++|++|.++.|||.++ ...      +.++|++|||+|++|+
T Consensus        99 ~~~---------~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsgg  169 (347)
T KOG1198|consen   99 AFL---------SSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGG  169 (347)
T ss_pred             ecc---------CCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcH
Confidence            543         379999999999999999999999999999999999999999 456      7999999999999999


Q ss_pred             HHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC-----CCcccEEEeCCCC--cHHHHHhhccC
Q 023273          163 VGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAVGQ--CDKALKAVKEG  235 (284)
Q Consensus       163 ~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~d~vid~~g~--~~~~~~~l~~~  235 (284)
                      +|.+++|+|++. ++..++++.++++.++++++|+++++|+++.++.+.     .++||+||||.|+  ......++...
T Consensus       170 VG~~aiQlAk~~-~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~~  248 (347)
T KOG1198|consen  170 VGTAAIQLAKHA-GAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLLKG  248 (347)
T ss_pred             HHHHHHHHHHhc-CCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCCccccchhhhccC
Confidence            999999999996 678888999999999999999999999988664443     4589999999986  47778888888


Q ss_pred             CEEEEEcCCC-------CC-------------------CceeEEEeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          236 GRVVSIIGSV-------TP-------------------PASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       236 G~~v~~g~~~-------~~-------------------~~~~~~~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      |+...++...       ..                   ....+.+....+.++.++++++.|+|+|.|++.|||
T Consensus       249 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~  322 (347)
T KOG1198|consen  249 GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPF  322 (347)
T ss_pred             CceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeH
Confidence            7644442221       11                   000112345789999999999999999999999996

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1e-30  Score=229.53  Aligned_cols=273  Identities=46%  Similarity=0.692  Sum_probs=221.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..++.+ ..++++ +.+.|++.+++|+|++.++++|++|.....|.+. .+...|.++|||++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~v~~~G~~~~   77 (326)
T cd08272           1 MKALVLESFGGP-EVFELR-EVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA-ARPPLPAILGCDVAGVVEAVGEGVT   77 (326)
T ss_pred             CeEEEEccCCCc-hheEEe-ecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC-CCCCCCcccccceeEEEEEeCCCCC
Confidence            999999988876 557887 6777788999999999999999999998877653 2234577899999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga  159 (284)
                      +|++||+|++...+..    ...|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++ +..++.++++++|+|+
T Consensus        78 ~~~~Gd~V~~~~~~~~----~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~  153 (326)
T cd08272          78 RFRVGDEVYGCAGGLG----GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGG  153 (326)
T ss_pred             CCCCCCEEEEccCCcC----CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            9999999998753211    1368999999999999999999999999999999999999987 6789999999999999


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKA  231 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~  231 (284)
                      +|.+|++++++++.. |.+++.++++ ++.+.++++|.+.+++.... +..    .  .+++|+++|++++  ...++++
T Consensus       154 ~~~~g~~~~~~a~~~-g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~  230 (326)
T cd08272         154 AGGVGHVAVQLAKAA-GARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDASFEA  230 (326)
T ss_pred             CCcHHHHHHHHHHHc-CCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHHHHHHHHH
Confidence            999999999999995 9999999888 88888888998777776543 222    1  3579999999885  4778999


Q ss_pred             hccCCEEEEEcCCCC-------CCceeE--EEec-----------cHHHHHHHHHHHHCCCeeEeec-ccccC
Q 023273          232 VKEGGRVVSIIGSVT-------PPASSF--VLTS-----------DGSILEKLNPYFESGKVKAIID-PKGLL  283 (284)
Q Consensus       232 l~~~G~~v~~g~~~~-------~~~~~~--~~~~-----------~~~~~~~~~~~~~~g~i~~~i~-~~~~~  283 (284)
                      ++++|+++.++....       .....+  ....           ..+.+++++++++++.+++.++ ++||+
T Consensus       231 l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~  303 (326)
T cd08272         231 VALYGRVVSILGGATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPL  303 (326)
T ss_pred             hccCCEEEEEecCCccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecH
Confidence            999999999875420       111111  1100           1457888999999999988766 77764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=4.7e-31  Score=234.15  Aligned_cols=275  Identities=29%  Similarity=0.341  Sum_probs=208.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCC-CCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      ||+++++.+++.   +++. +.|.|.|+++||+|++.++++|++|++++.+.. .......|.++|||++|+|+++|+++
T Consensus         1 ~~~~~~~~~~~~---~~~~-~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v   76 (341)
T PRK05396          1 MKALVKLKAEPG---LWLT-DVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEV   76 (341)
T ss_pred             CceEEEecCCCc---eEEE-ECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCC
Confidence            899999888854   7988 889999999999999999999999998776531 11122456789999999999999999


Q ss_pred             CCCCCCCEEEEecCccc------------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           80 KKFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      +++++||+|++.+....                  ..+...+|+|++|+.++.+.++++|+++++.+++.+ ..+.++++
T Consensus        77 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~  155 (341)
T PRK05396         77 TGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVH  155 (341)
T ss_pred             CcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHH
Confidence            99999999988621100                  001124699999999999999999999998877744 45556665


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEK  214 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~  214 (284)
                      +... ...+|++|+|.| +|.+|++++++|+++ |+ ++++++.++++.+.++++|++.+++++..++.+    .  .++
T Consensus       156 ~~~~-~~~~g~~vlV~~-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  232 (341)
T PRK05396        156 TALS-FDLVGEDVLITG-AGPIGIMAAAVAKHV-GARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEG  232 (341)
T ss_pred             HHHc-CCCCCCeEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCC
Confidence            5432 346899999987 799999999999995 88 577787888899999999998888876543322    1  468


Q ss_pred             ccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCc----------eeEEE---eccHHHHHHHHHHHHCC-CeeEee
Q 023273          215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA----------SSFVL---TSDGSILEKLNPYFESG-KVKAII  277 (284)
Q Consensus       215 ~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~----------~~~~~---~~~~~~~~~~~~~~~~g-~i~~~i  277 (284)
                      +|++|||.|.   ...++++|+++|+++.+|.......          ..+..   ....+.+..++++++++ ++.+.+
T Consensus       233 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (341)
T PRK05396        233 FDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSGLDLSPII  312 (341)
T ss_pred             CCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcCCChhHhe
Confidence            9999999885   4789999999999999986532111          11111   11234566788889888 555566


Q ss_pred             cccccC
Q 023273          278 DPKGLL  283 (284)
Q Consensus       278 ~~~~~~  283 (284)
                      .+++++
T Consensus       313 ~~~~~l  318 (341)
T PRK05396        313 THRFPI  318 (341)
T ss_pred             EEEEeH
Confidence            676653

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=2.2e-30  Score=225.55  Aligned_cols=273  Identities=46%  Similarity=0.664  Sum_probs=222.0

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCC-CCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS-ATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      ||+++++.++.. +.+.++ +.+.|.++++||+|++.++++|++|+..+.|.+. ......|..+|||++|+|+.+|+++
T Consensus         1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~   78 (309)
T cd05289           1 MKAVRIHEYGGP-EVLELA-DVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGV   78 (309)
T ss_pred             CceEEEcccCCc-cceeec-ccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCC
Confidence            899999988876 446676 6677788999999999999999999998877542 1123447889999999999999999


Q ss_pred             CCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEc
Q 023273           80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLG  158 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g  158 (284)
                      .++++||+|++....      ...|+|++|+.++.+.++++|+++++..++.+++.+.++|+++. ...+.++++++|+|
T Consensus        79 ~~~~~G~~V~~~~~~------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g  152 (309)
T cd05289          79 TGFKVGDEVFGMTPF------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHG  152 (309)
T ss_pred             CCCCCCCEEEEccCC------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEec
Confidence            999999999987520      12589999999999999999999999898889999999999985 45689999999999


Q ss_pred             CCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc--cCCCcccEEEeCCCC--cHHHHHhhcc
Q 023273          159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE--DLPEKFDVVFDAVGQ--CDKALKAVKE  234 (284)
Q Consensus       159 a~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~d~vid~~g~--~~~~~~~l~~  234 (284)
                      ++|.+|++++++++.. |.++++++.++ +.+.++++|.+.+++....++.  ...+++|++++++|+  ...+++++++
T Consensus       153 ~~g~~g~~~~~~a~~~-g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~  230 (309)
T cd05289         153 AAGGVGSFAVQLAKAR-GARVIATASAA-NADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGETLARSLALVKP  230 (309)
T ss_pred             CCchHHHHHHHHHHHc-CCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhhccCCCCceEEEECCchHHHHHHHHHHhc
Confidence            8899999999999995 99999888777 8888888888777776544333  234579999999986  4789999999


Q ss_pred             CCEEEEEcCCCCCC------ceeEE---EeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          235 GGRVVSIIGSVTPP------ASSFV---LTSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       235 ~G~~v~~g~~~~~~------~~~~~---~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +|+++.+|....+.      ...+.   .....+.+.+++++++++.+++.+++.||+
T Consensus       231 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (309)
T cd05289         231 GGRLVSIAGPPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDRVFPL  288 (309)
T ss_pred             CcEEEEEcCCCcchhhhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEeeccEEcH
Confidence            99999998643221      11111   112267899999999999999888888875

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.7e-30  Score=229.55  Aligned_cols=279  Identities=37%  Similarity=0.479  Sum_probs=222.4

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++...+.+ ..+++. +.+.|.+.+++|+|++.++++|++|++.+.|..+. ....|.++|||++|+|+.+|+++.
T Consensus         1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~G~~~~   77 (342)
T cd08266           1 MKAVVIRGHGGP-EVLEYG-DLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI-KLPLPHILGSDGAGVVEAVGPGVT   77 (342)
T ss_pred             CeEEEEecCCCc-cceeEe-ecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCC-CCCCCeecccceEEEEEEeCCCCC
Confidence            899999866655 457787 67778889999999999999999999988876431 234577899999999999999999


Q ss_pred             CCCCCCEEEEecCc------------------cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273           81 KFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (284)
                      .|++||+|++.+..                  ....+....|+|++|+.++.+.++++|+++++.+++.+++++.+||++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~  157 (342)
T cd08266          78 NVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHM  157 (342)
T ss_pred             CCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHH
Confidence            99999999986321                  001112246899999999999999999999999999999999999999


Q ss_pred             H-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc------CCCcc
Q 023273          143 L-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKF  215 (284)
Q Consensus       143 l-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~  215 (284)
                      + ...++.++++++|+|+++.+|++++++++.. |.+++++++++++.+.++..+.+.+++........      ..+++
T Consensus       158 l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (342)
T cd08266         158 LVTRARLRPGETVLVHGAGSGVGSAAIQIAKLF-GATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGV  236 (342)
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCC
Confidence            7 5688899999999999899999999999995 99999999999999888888877666654322211      13579


Q ss_pred             cEEEeCCCC--cHHHHHhhccCCEEEEEcCCCCC-Cc----------eeEE--EeccHHHHHHHHHHHHCCCeeEeeccc
Q 023273          216 DVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-PA----------SSFV--LTSDGSILEKLNPYFESGKVKAIIDPK  280 (284)
Q Consensus       216 d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~~-~~----------~~~~--~~~~~~~~~~~~~~~~~g~i~~~i~~~  280 (284)
                      |++++++|.  ...++++++++|+++.++..... ..          ..+.  .......+.+++++++++.+++.++++
T Consensus       237 d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~  316 (342)
T cd08266         237 DVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLKPVIDSV  316 (342)
T ss_pred             cEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCcccceeee
Confidence            999999985  57899999999999999765321 11          1111  112456788999999999998888787


Q ss_pred             ccC
Q 023273          281 GLL  283 (284)
Q Consensus       281 ~~~  283 (284)
                      |++
T Consensus       317 ~~~  319 (342)
T cd08266         317 FPL  319 (342)
T ss_pred             EcH
Confidence            764

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1.5e-30  Score=230.11  Aligned_cols=272  Identities=36%  Similarity=0.498  Sum_probs=216.4

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..++.    +++. +.+.|++.++||+|++.++++|++|.....|.++.   .+|.++|+|++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~----~~~~-~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~---~~p~~~g~~~~G~v~~vG~~v~   72 (334)
T cd08234           1 MKALVYEGPGE----LEVE-EVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA---APPLVPGHEFAGVVVAVGSKVT   72 (334)
T ss_pred             CeeEEecCCCc----eEEE-eccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC---CCCcccccceEEEEEEeCCCCC
Confidence            89999998874    5888 88999999999999999999999999998887542   3677899999999999999999


Q ss_pred             CCCCCCEEEEecCccc----c--------------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273           81 KFKVGDEVYGDINEKA----L--------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~----~--------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (284)
                      ++++||+|++......    .              .+....|+|++|++++.+.++++|+++++.+++.+ ..+.+++++
T Consensus        73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~  151 (334)
T cd08234          73 GFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHG  151 (334)
T ss_pred             CCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHH
Confidence            9999999987321100    0              11124689999999999999999999998888765 677789988


Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccccc----CCCcccE
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED----LPEKFDV  217 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~d~  217 (284)
                      +...++.++++|+|+| +|.+|.+++++|+.. |++ ++++++++++.+.+++++.+.++++.......    ..+++|+
T Consensus       152 l~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~  229 (334)
T cd08234         152 LDLLGIKPGDSVLVFG-AGPIGLLLAQLLKLN-GASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDV  229 (334)
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcE
Confidence            8778899999999997 799999999999995 887 88888899999999999987777765443211    2467999


Q ss_pred             EEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC------------ceeEE-EeccHHHHHHHHHHHHCCCeeE--eecc
Q 023273          218 VFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP------------ASSFV-LTSDGSILEKLNPYFESGKVKA--IIDP  279 (284)
Q Consensus       218 vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~------------~~~~~-~~~~~~~~~~~~~~~~~g~i~~--~i~~  279 (284)
                      +||++|.   ...++++|+++|+++.+|......            +..+. .....+.+++++++++++.+++  .+++
T Consensus       230 v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  309 (334)
T cd08234         230 VIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSH  309 (334)
T ss_pred             EEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEEE
Confidence            9999974   478899999999999997543211            11111 1124567899999999999864  2555


Q ss_pred             cccC
Q 023273          280 KGLL  283 (284)
Q Consensus       280 ~~~~  283 (284)
                      +|++
T Consensus       310 ~~~~  313 (334)
T cd08234         310 RLPL  313 (334)
T ss_pred             EecH
Confidence            5553

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.1e-31  Score=232.29  Aligned_cols=270  Identities=33%  Similarity=0.467  Sum_probs=209.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++..++ . ..++++ +.+.|+++++||+|++.++++|++|+....+..   ...+|.++|||++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~-~-~~~~~~-~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~~v~   74 (325)
T cd08264           1 MKALVFEKSG-I-ENLKVE-DVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK---VKPMPHIPGAEFAGVVEEVGDHVK   74 (325)
T ss_pred             CeeEEeccCC-C-CceEEE-eccCCCCCCCeEEEEEEEEEechHHHHHHhCCC---CCCCCeecccceeEEEEEECCCCC
Confidence            8999998776 3 457887 677788999999999999999999998876521   123467899999999999999999


Q ss_pred             CCCCCCEEEEecCc----c---cc-----------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273           81 KFKVGDEVYGDINE----K---AL-----------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~----~---~~-----------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (284)
                      +|++||+|++...-    +   ..           .+....|+|++|+.++.+.++++|+++++++++.+++++.+||++
T Consensus        75 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~  154 (325)
T cd08264          75 GVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHA  154 (325)
T ss_pred             CCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHH
Confidence            99999999876310    0   00           011136899999999999999999999999999999999999999


Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC--cccccCCCcccEEEe
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK--ENIEDLPEKFDVVFD  220 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~d~vid  220 (284)
                      +...+++++++|+|+|++|.+|++++++|+++ |.+++++++    .+.++++|.+.+++.+.  ..+....+++|+++|
T Consensus       155 l~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~-G~~v~~~~~----~~~~~~~g~~~~~~~~~~~~~l~~~~~~~d~vl~  229 (325)
T cd08264         155 LKTAGLGPGETVVVFGASGNTGIFAVQLAKMM-GAEVIAVSR----KDWLKEFGADEVVDYDEVEEKVKEITKMADVVIN  229 (325)
T ss_pred             HHhcCCCCCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeH----HHHHHHhCCCeeecchHHHHHHHHHhCCCCEEEE
Confidence            97788999999999998899999999999996 999888763    36667788887877643  112222267999999


Q ss_pred             CCCC--cHHHHHhhccCCEEEEEcCCC-CCCceeE--------EE----eccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          221 AVGQ--CDKALKAVKEGGRVVSIIGSV-TPPASSF--------VL----TSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       221 ~~g~--~~~~~~~l~~~G~~v~~g~~~-~~~~~~~--------~~----~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      ++|+  ...++++|+++|+++.+|... ....+++        ..    ...+++++++++++...+  ..++++||+
T Consensus       230 ~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~  305 (325)
T cd08264         230 SLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLK--VKVWKTFKL  305 (325)
T ss_pred             CCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCC--ceeEEEEcH
Confidence            9985  478999999999999998642 1111110        11    123568899999996444  456677764

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=9.5e-31  Score=232.29  Aligned_cols=272  Identities=30%  Similarity=0.429  Sum_probs=215.4

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||++++.++.    +.++ +.+.|++.++||+|++.++++|++|.....+.++   ...|.++|+|++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~----l~~~-~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~---~~~~~~~g~~~~G~V~~~g~~v~   72 (343)
T cd08236           1 MKALVLTGPGD----LRYE-DIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA---YHPPLVLGHEFSGTVEEVGSGVD   72 (343)
T ss_pred             CeeEEEecCCc----eeEE-ecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC---CCCCcccCcceEEEEEEECCCCC
Confidence            89999998764    5888 7888999999999999999999999988877541   23467899999999999999999


Q ss_pred             CCCCCCEEEEecCc----c--------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273           81 KFKVGDEVYGDINE----K--------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~----~--------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (284)
                      .|++||+|++.+..    +              ...+....|+|++|+.+|.+.++++|+++++++++++ ..+.|||++
T Consensus        73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~  151 (343)
T cd08236          73 DLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHA  151 (343)
T ss_pred             cCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHH
Confidence            99999999986310    0              0011224799999999999999999999999888877 577899999


Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccccc---C--CCccc
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED---L--PEKFD  216 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~--~~~~d  216 (284)
                      +...++.++++|+|+| +|.+|.+++++|+.+ |.+ ++++++++++.+.++++|.+.+++++......   .  .+++|
T Consensus       152 l~~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~-G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~d  229 (343)
T cd08236         152 VRLAGITLGDTVVVIG-AGTIGLLAIQWLKIL-GAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRGAD  229 (343)
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCCCC
Confidence            8777889999999997 799999999999996 887 88888888999998999988888775433111   1  34699


Q ss_pred             EEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC-------------ceeE---EEec----cHHHHHHHHHHHHCCCe
Q 023273          217 VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-------------ASSF---VLTS----DGSILEKLNPYFESGKV  273 (284)
Q Consensus       217 ~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-------------~~~~---~~~~----~~~~~~~~~~~~~~g~i  273 (284)
                      ++|||.|.   ...++++|+++|+++.+|....+.             ...+   ....    ..+.+++++++++++.+
T Consensus       230 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  309 (343)
T cd08236         230 LVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKI  309 (343)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCC
Confidence            99999874   478899999999999998543221             1111   1111    15678899999999987


Q ss_pred             e--EeecccccC
Q 023273          274 K--AIIDPKGLL  283 (284)
Q Consensus       274 ~--~~i~~~~~~  283 (284)
                      .  +.+.+++++
T Consensus       310 ~~~~~~~~~~~~  321 (343)
T cd08236         310 KVEPLITHRLPL  321 (343)
T ss_pred             ChHHheeeeecH
Confidence            5  445555553

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=1e-30  Score=229.78  Aligned_cols=266  Identities=27%  Similarity=0.402  Sum_probs=215.5

Q ss_pred             EcccCCCc-cceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 023273            6 YKEYGNSQ-SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKV   84 (284)
Q Consensus         6 ~~~~g~~~-~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   84 (284)
                      ++.++.+. +.++++ +.+.|.+.+++|+|++.++++|+.|...+.|.++. ...+|.++|||++|+|+.+|++++.+++
T Consensus         3 ~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~v~~~~~   80 (323)
T cd05282           3 YTQFGEPLPLVLELV-SLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS-RPPLPAVPGNEGVGVVVEVGSGVSGLLV   80 (323)
T ss_pred             eCcCCCCccceEEeE-eCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC-CCCCCCcCCcceEEEEEEeCCCCCCCCC
Confidence            34455441 147777 67888899999999999999999999988776532 2245778999999999999999999999


Q ss_pred             CCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchH
Q 023273           85 GDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGV  163 (284)
Q Consensus        85 Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~  163 (284)
                      ||+|++...         .|+|++|+.++.+.++++|++++..+++.+++.+.+||+++ ....+.++++|+|+|++|.+
T Consensus        81 Gd~V~~~~~---------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~v  151 (323)
T cd05282          81 GQRVLPLGG---------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAV  151 (323)
T ss_pred             CCEEEEeCC---------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHH
Confidence            999999752         48999999999999999999999999999989999999998 45678999999999988999


Q ss_pred             HHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHhhccC
Q 023273          164 GTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKAVKEG  235 (284)
Q Consensus       164 G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~l~~~  235 (284)
                      |++++++|+++ |+++++++.++++.+.++++|.+.++++....+..    .  .+++|++|||+|+  ...++++++++
T Consensus       152 g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~  230 (323)
T cd05282         152 GRMLIQLAKLL-GFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPG  230 (323)
T ss_pred             HHHHHHHHHHC-CCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCC
Confidence            99999999996 99999999999999999999998888876433221    1  3579999999986  46789999999


Q ss_pred             CEEEEEcCCCCC-----------CceeEEE---ec-----c----HHHHHHHHHHHHCCCeeEeecccccC
Q 023273          236 GRVVSIIGSVTP-----------PASSFVL---TS-----D----GSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       236 G~~v~~g~~~~~-----------~~~~~~~---~~-----~----~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      |+++.+|.....           ....+..   ..     .    .+.++++++++.+|.+.+.+.++|++
T Consensus       231 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~  301 (323)
T cd05282         231 GTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPL  301 (323)
T ss_pred             CEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecH
Confidence            999998754221           1222211   11     1    24688899999999998877787764

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.6e-30  Score=229.42  Aligned_cols=267  Identities=31%  Similarity=0.452  Sum_probs=218.9

Q ss_pred             eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (284)
Q Consensus         2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   81 (284)
                      ||+++...+.+ +.++++ +.+.|.|.++|++|++.++++|++|+....|.++.. ..+|.++|||++|+|+.+|+++..
T Consensus         2 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~vG~~v~~   78 (331)
T cd08273           2 REVVVTRRGGP-EVLKVV-EADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ-PPLPFTPGYDLVGRVDALGSGVTG   78 (331)
T ss_pred             eeEEEccCCCc-ccEEEe-ccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC-CCCCcccccceEEEEEEeCCCCcc
Confidence            78999988877 668888 789999999999999999999999999888765322 246778999999999999999999


Q ss_pred             CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 023273           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA  160 (284)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~  160 (284)
                      |++||+|++...         .|+|++|+.++.+.++++|++++..+++.+++++.+||+++ ...++.++++|+|+|++
T Consensus        79 ~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~  149 (331)
T cd08273          79 FEVGDRVAALTR---------VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGAS  149 (331)
T ss_pred             CCCCCEEEEeCC---------CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCC
Confidence            999999999752         48999999999999999999999999999999999999998 45789999999999989


Q ss_pred             chHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc---cCCCcccEEEeCCCC--cHHHHHhhccC
Q 023273          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---DLPEKFDVVFDAVGQ--CDKALKAVKEG  235 (284)
Q Consensus       161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~d~vid~~g~--~~~~~~~l~~~  235 (284)
                      |.+|++++++|+.+ |++++.++. +++.+.++++|... ++.+..++.   ...+++|++++++|+  ...++++++++
T Consensus       150 g~ig~~~~~~a~~~-g~~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~  226 (331)
T cd08273         150 GGVGQALLELALLA-GAEVYGTAS-ERNHAALRELGATP-IDYRTKDWLPAMLTPGGVDVVFDGVGGESYEESYAALAPG  226 (331)
T ss_pred             cHHHHHHHHHHHHc-CCEEEEEeC-HHHHHHHHHcCCeE-EcCCCcchhhhhccCCCceEEEECCchHHHHHHHHHhcCC
Confidence            99999999999995 999998887 88888888888643 343322221   123579999999986  47889999999


Q ss_pred             CEEEEEcCCCCCCc--e----------------------eEEEec-----------cHHHHHHHHHHHHCCCeeEeeccc
Q 023273          236 GRVVSIIGSVTPPA--S----------------------SFVLTS-----------DGSILEKLNPYFESGKVKAIIDPK  280 (284)
Q Consensus       236 G~~v~~g~~~~~~~--~----------------------~~~~~~-----------~~~~~~~~~~~~~~g~i~~~i~~~  280 (284)
                      |+++.+|.......  +                      .+....           ..+.++.+++++++|.+++.+.++
T Consensus       227 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~  306 (331)
T cd08273         227 GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKR  306 (331)
T ss_pred             CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceE
Confidence            99999986542111  0                      001000           136788999999999998877777


Q ss_pred             ccC
Q 023273          281 GLL  283 (284)
Q Consensus       281 ~~~  283 (284)
                      |++
T Consensus       307 ~~~  309 (331)
T cd08273         307 LPL  309 (331)
T ss_pred             EcH
Confidence            764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=2.6e-30  Score=228.61  Aligned_cols=268  Identities=36%  Similarity=0.539  Sum_probs=216.8

Q ss_pred             CeEEEEcccCCCcc--ceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCC
Q 023273            1 MKAWVYKEYGNSQS--VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ   78 (284)
Q Consensus         1 m~a~~~~~~g~~~~--~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~   78 (284)
                      |||+++++++.+.+  .++++ +.+.|++.+++++|++.++++|++|++.+.+.++  ....|.++|||++|+|+++|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~   77 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDI-ELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP--VPGQPKILGWDASGVVEAVGSE   77 (336)
T ss_pred             CceEEecCCCCCCcccceeEc-cCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC--CCCCCcccccceEEEEEEcCCC
Confidence            89999999998721  36666 6788888999999999999999999998877653  2235678999999999999999


Q ss_pred             CCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCC-----CC
Q 023273           79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSA-----GK  152 (284)
Q Consensus        79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~-----g~  152 (284)
                      +..|++||+|++...      ...+|+|++|+.++.+.++++|++++.++++.+++.+.|||+++ ...++.+     ++
T Consensus        78 v~~~~~Gd~V~~~~~------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~  151 (336)
T cd08252          78 VTLFKVGDEVYYAGD------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGK  151 (336)
T ss_pred             CCCCCCCCEEEEcCC------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCC
Confidence            999999999988531      01368999999999999999999999999999999999999987 5677776     99


Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHHcCCcEEeeCCCcc---cccC-CCcccEEEeCCCC---
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IEDL-PEKFDVVFDAVGQ---  224 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~-~~~~d~vid~~g~---  224 (284)
                      +|+|+|++|.+|++++++|+.+ | .++++++.++++.+.++++|.+.+++.....   +... .+++|++||++|+   
T Consensus       152 ~vlV~g~~g~vg~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~~  230 (336)
T cd08252         152 TLLIIGGAGGVGSIAIQLAKQL-TGLTVIATASRPESIAWVKELGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQH  230 (336)
T ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCcEEEeCCccHHHHHHhhCCCCCCEEEEccCcHHH
Confidence            9999998999999999999996 8 9999999999999999999988888765321   1111 3579999999984   


Q ss_pred             cHHHHHhhccCCEEEEEcCCCC--------CCceeEEE---e-----------ccHHHHHHHHHHHHCCCeeEeec
Q 023273          225 CDKALKAVKEGGRVVSIIGSVT--------PPASSFVL---T-----------SDGSILEKLNPYFESGKVKAIID  278 (284)
Q Consensus       225 ~~~~~~~l~~~G~~v~~g~~~~--------~~~~~~~~---~-----------~~~~~~~~~~~~~~~g~i~~~i~  278 (284)
                      ...++++++++|+++.+|....        .....+..   .           ...+.++++++++.+|.+++.+.
T Consensus       231 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  306 (336)
T cd08252         231 WDAMAELIAPQGHICLIVDPQEPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLT  306 (336)
T ss_pred             HHHHHHHhcCCCEEEEecCCCCcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEeccee
Confidence            4788999999999999975421        11111111   0           01245788999999999987644

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=2.9e-30  Score=225.83  Aligned_cols=270  Identities=38%  Similarity=0.540  Sum_probs=219.4

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++..++.+ ..+++. +.+.|.+.+++++|++.++++|++|++...|.++. ....|.++|||++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~vg~~~~   77 (323)
T cd05276           1 MKAIVIKEPGGP-EVLELG-EVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPP-PPGASDILGLEVAGVVVAVGPGVT   77 (323)
T ss_pred             CeEEEEecCCCc-ccceEE-ecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCC-CCCCCCcccceeEEEEEeeCCCCC
Confidence            999999987765 557787 66777789999999999999999999988776532 224568899999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga  159 (284)
                      .+++||+|+++..         +|+|++|+.++.+.++++|+++++.+++.++.++.++|+++ ....+.++++++|+|+
T Consensus        78 ~~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~  148 (323)
T cd05276          78 GWKVGDRVCALLA---------GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGG  148 (323)
T ss_pred             CCCCCCEEEEecC---------CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            9999999998642         58999999999999999999999999999999999999998 4578899999999999


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKA  231 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~  231 (284)
                      +|.+|++++++++.. |++++++++++++.+.+++++.+.+++.....+..    .  .+++|+++++.|+  ...++++
T Consensus       149 ~~~ig~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~  227 (323)
T cd05276         149 ASGVGTAAIQLAKAL-GARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRA  227 (323)
T ss_pred             cChHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHh
Confidence            999999999999995 99999999999999999888887777765433221    1  3579999999986  4778999


Q ss_pred             hccCCEEEEEcCCCCC-----------CceeEEE---ec---------cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          232 VKEGGRVVSIIGSVTP-----------PASSFVL---TS---------DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       232 l~~~G~~v~~g~~~~~-----------~~~~~~~---~~---------~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      ++++|+++.++.....           ....+..   ..         ....+.++.+++.++.+++.+++.|++
T Consensus       228 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (323)
T cd05276         228 LAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPL  302 (323)
T ss_pred             hccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcH
Confidence            9999999998754211           1111110   00         113467788889999998877777764

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=4.8e-30  Score=225.83  Aligned_cols=272  Identities=28%  Similarity=0.362  Sum_probs=213.2

Q ss_pred             eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (284)
Q Consensus         2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   81 (284)
                      ||+++...+.+ ..++++ +.|.|.++++||+|++.++++|++|++.+.|.++. ....|.++|||++|+|+.  ++++.
T Consensus         1 ~a~~~~~~~~~-~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~V~~--~~~~~   75 (323)
T TIGR02823         1 KALVVEKEDGK-VSAQVE-TLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGV-VRSYPMIPGIDAAGTVVS--SEDPR   75 (323)
T ss_pred             CeEEEccCCCC-cceeEe-ecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCC-CCCCCccceeeeEEEEEe--cCCCC
Confidence            68899988876 678899 89999999999999999999999999988887532 124578899999999988  56678


Q ss_pred             CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH---hcccCCCC-EEEEE
Q 023273           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE---RSAFSAGK-SILVL  157 (284)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~---~~~~~~g~-~vlI~  157 (284)
                      |++||+|++....   .+...+|+|++|+.+|.+.++++|+++++++++.+++.+.+|+.++.   ...+.+++ +|+|+
T Consensus        76 ~~~Gd~V~~~~~~---~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~  152 (323)
T TIGR02823        76 FREGDEVIVTGYG---LGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVT  152 (323)
T ss_pred             CCCCCEEEEccCC---CCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEE
Confidence            9999999986421   11123689999999999999999999999999999999889987763   34588898 99999


Q ss_pred             cCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccc--ccC-CCcccEEEeCCCC--cHHHHHhh
Q 023273          158 GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI--EDL-PEKFDVVFDAVGQ--CDKALKAV  232 (284)
Q Consensus       158 ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~-~~~~d~vid~~g~--~~~~~~~l  232 (284)
                      |++|.+|.+++++|+.+ |+++++++.++++.+.++++|.+.+++.++...  ... ..++|+++||+|+  ...+++++
T Consensus       153 g~~g~vg~~~~~la~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l  231 (323)
T TIGR02823       153 GATGGVGSLAVAILSKL-GYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGHTLANVLAQL  231 (323)
T ss_pred             cCCcHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEECccHHHHHHHHHHh
Confidence            98899999999999996 999999988888889999999888887653321  111 2359999999985  57899999


Q ss_pred             ccCCEEEEEcCCCCC-----------CceeEEE---e-c----cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          233 KEGGRVVSIIGSVTP-----------PASSFVL---T-S----DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       233 ~~~G~~v~~g~~~~~-----------~~~~~~~---~-~----~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +++|+++.+|.....           .+..+..   . .    ..+.++.+.+++..+.+++.+ ++||+
T Consensus       232 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l  300 (323)
T TIGR02823       232 KYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESIT-REITL  300 (323)
T ss_pred             CCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCce-eeecH
Confidence            999999999864311           1111111   0 0    123466777778888876643 46664

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.98  E-value=3.6e-30  Score=228.65  Aligned_cols=273  Identities=25%  Similarity=0.348  Sum_probs=209.6

Q ss_pred             EEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcC-CCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273            3 AWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLG-AFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (284)
Q Consensus         3 a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g-~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   81 (284)
                      |+++..++.    ++++ +.+.|.|.++||+|++.++++|++|.+.+.+ ..+......|.++|+|++|+|+++|+++++
T Consensus         1 ~~~~~~~~~----~~~~-~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~   75 (343)
T cd05285           1 AAVLHGPGD----LRLE-ERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTH   75 (343)
T ss_pred             CceEecCCc----eeEE-ECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCC
Confidence            356666644    6888 7888999999999999999999999887642 222112235678999999999999999999


Q ss_pred             CCCCCEEEEecCccc------------------c-CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273           82 FKVGDEVYGDINEKA------------------L-DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (284)
Q Consensus        82 ~~~Gd~V~~~~~~~~------------------~-~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (284)
                      |++||+|++.+....                  . ......|+|++|++++.+.++++|+++++++++.+ .++.+|+++
T Consensus        76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~  154 (343)
T cd05285          76 LKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHA  154 (343)
T ss_pred             CCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHH
Confidence            999999987321100                  0 00113689999999999999999999999888766 577889998


Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccc-------ccC--C
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENI-------EDL--P  212 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~--~  212 (284)
                      +...+++++++|+|.| +|.+|++++++|+.+ |.+ ++++++++++.+.++++|.+.+++++...+       ...  +
T Consensus       155 ~~~~~~~~g~~vlI~g-~g~vG~~a~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  232 (343)
T cd05285         155 CRRAGVRPGDTVLVFG-AGPIGLLTAAVAKAF-GATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGG  232 (343)
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCC
Confidence            8889999999999987 699999999999996 887 888888899999999999998888765432       111  3


Q ss_pred             CcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCc----------eeEEE-eccHHHHHHHHHHHHCCCee--Ee
Q 023273          213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA----------SSFVL-TSDGSILEKLNPYFESGKVK--AI  276 (284)
Q Consensus       213 ~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~----------~~~~~-~~~~~~~~~~~~~~~~g~i~--~~  276 (284)
                      +++|++|||.|+   ...++++++++|+++.+|.......          +.+.. ....+.+.+++++++++.+.  +.
T Consensus       233 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~  312 (343)
T cd05285         233 KGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPL  312 (343)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHh
Confidence            569999999985   4788999999999999875432111          11111 12337788999999999865  44


Q ss_pred             ecccccC
Q 023273          277 IDPKGLL  283 (284)
Q Consensus       277 i~~~~~~  283 (284)
                      +.++|++
T Consensus       313 ~~~~~~l  319 (343)
T cd05285         313 ITHRFPL  319 (343)
T ss_pred             EEEEEeH
Confidence            5666653

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.98  E-value=1e-29  Score=222.40  Aligned_cols=262  Identities=29%  Similarity=0.413  Sum_probs=205.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++..+++  ..++++ +.+.|++.+++|+|++.++++|++|.+...|.+.  ....|.++|+|++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~--~~~~~~-~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~--~~~~p~~~G~e~~G~V~~vG~~v~   75 (306)
T cd08258           1 MKALVKTGPGP--GNVELR-EVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD--PVETPVVLGHEFSGTIVEVGPDVE   75 (306)
T ss_pred             CeeEEEecCCC--CceEEe-ecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC--cCCCCeeeccceEEEEEEECCCcC
Confidence            89999987553  347888 8899999999999999999999999988877642  223467899999999999999999


Q ss_pred             CCCCCCEEEEecCccc-------------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           81 KFKVGDEVYGDINEKA-------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~-------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      .|++||+|++....+.                   ..+....|+|++|++++.+.++++|+++++++++ ++....++|+
T Consensus        76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~  154 (306)
T cd08258          76 GWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVH  154 (306)
T ss_pred             cCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHH
Confidence            9999999998642000                   0011235899999999999999999999988776 7777789999


Q ss_pred             HH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC--ChhhHHHHHHcCCcEEeeCCCccccc------CC
Q 023273          142 GL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS--STAKLDLLRSLGADLAIDYTKENIED------LP  212 (284)
Q Consensus       142 al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~------~~  212 (284)
                      ++ ...+++++++|+|.| +|.+|.+++++|+.+ |.+++++..  ++++.+.++++|.+.+ ++...++..      ..
T Consensus       155 ~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~-G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~  231 (306)
T cd08258         155 AVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQ-GATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDG  231 (306)
T ss_pred             HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCC
Confidence            98 568889999999976 899999999999996 999877633  4557788888998766 655433221      13


Q ss_pred             CcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCC-CCce------------eEEEeccHHHHHHHHHHHHCC
Q 023273          213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT-PPAS------------SFVLTSDGSILEKLNPYFESG  271 (284)
Q Consensus       213 ~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~-~~~~------------~~~~~~~~~~~~~~~~~~~~g  271 (284)
                      +++|++||+.|.   ...++++|+++|+++.+|.... +..+            ........++++++++++++|
T Consensus       232 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  306 (306)
T cd08258         232 DGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG  306 (306)
T ss_pred             CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence            579999999974   4788999999999999987541 1111            112233578899999999876

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.98  E-value=2.3e-29  Score=221.51  Aligned_cols=273  Identities=25%  Similarity=0.297  Sum_probs=214.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.++|.+ +.++++ +.|.|+|+++|++|++.++++|++|.....|.++.. ..+|.++|||++|+|++  ++++
T Consensus         1 ~~a~~~~~~~~~-~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~V~~--~~~~   75 (324)
T cd08288           1 FKALVLEKDDGG-TSAELR-ELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIV-RTFPLVPGIDLAGTVVE--SSSP   75 (324)
T ss_pred             CeeEEEeccCCC-cceEEE-ECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCcccc-CCCCCccccceEEEEEe--CCCC
Confidence            999999998876 668999 889999999999999999999999999887764211 23567899999999998  7778


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH---hcccC-CCCEEEE
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE---RSAFS-AGKSILV  156 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~---~~~~~-~g~~vlI  156 (284)
                      ++++||+|++...   ..+.+.+|+|++|++++.+.++++|++++.++++.+++.+++++.++.   ..+.. ++++|+|
T Consensus        76 ~~~~Gd~V~~~~~---~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI  152 (324)
T cd08288          76 RFKPGDRVVLTGW---GVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLV  152 (324)
T ss_pred             CCCCCCEEEECCc---cCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEE
Confidence            8999999998531   111123689999999999999999999999999999999888887753   34555 6789999


Q ss_pred             EcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccc--ccC-CCcccEEEeCCCC--cHHHHHh
Q 023273          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI--EDL-PEKFDVVFDAVGQ--CDKALKA  231 (284)
Q Consensus       157 ~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~-~~~~d~vid~~g~--~~~~~~~  231 (284)
                      +|++|.+|.+++++|+.+ |+++++++.+++|.+.++++|++.++++++...  ... .+++|.++|++++  ....+.+
T Consensus       153 ~ga~g~vg~~~~~~A~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  231 (324)
T cd08288         153 TGAAGGVGSVAVALLARL-GYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTVGGHTLANVLAQ  231 (324)
T ss_pred             ECCCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhhhccCcccEEEECCcHHHHHHHHHH
Confidence            998899999999999996 999999999999999999999988888754322  111 3468999999986  3677888


Q ss_pred             hccCCEEEEEcCCCC-----------CCceeEEE----e----ccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          232 VKEGGRVVSIIGSVT-----------PPASSFVL----T----SDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       232 l~~~G~~v~~g~~~~-----------~~~~~~~~----~----~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      ++.+|+++.+|....           .....+..    .    ...+.++.+.+++.++.+++ |.+++|+
T Consensus       232 ~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~  301 (324)
T cd08288         232 TRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA-LTREIPL  301 (324)
T ss_pred             hcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc-cceeecH
Confidence            999999999876421           11111111    0    12356777888888998876 4567764

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd05281 TDH Threonine dehydrogenase

Probab=99.98  E-value=7.3e-30  Score=226.55  Aligned_cols=274  Identities=29%  Similarity=0.354  Sum_probs=208.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCC-CCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      ||+++++.++..   +++. +.+.|.|+++|++|++.++++|++|...+.+.. .......|.++|||++|+|+.+|+++
T Consensus         1 ~~~~~~~~~~~~---~~~~-~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v   76 (341)
T cd05281           1 MKAIVKTKAGPG---AELV-EVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGV   76 (341)
T ss_pred             CcceEEecCCCc---eEEE-eCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCC
Confidence            999999988864   7888 788899999999999999999999988765431 11122356789999999999999999


Q ss_pred             CCCCCCCEEEEecCccc------------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           80 KKFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      +.+++||+|++......                  ..+....|+|++|++++.+.++++|++++++ .++++.++.++++
T Consensus        77 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~-~a~~~~~~~~a~~  155 (341)
T cd05281          77 TRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPE-IASIQEPLGNAVH  155 (341)
T ss_pred             CCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHH-HhhhhhHHHHHHH
Confidence            99999999988621100                  0011236899999999999999999999874 4466677778888


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-----CCCcc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKF  215 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~  215 (284)
                      ++. ....++++|+|.| +|.+|++++++|+.+ |. ++++++.+++|.+.++++|.+++++++...+..     ..+++
T Consensus       156 ~~~-~~~~~g~~vlV~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v  232 (341)
T cd05281         156 TVL-AGDVSGKSVLITG-CGPIGLMAIAVAKAA-GASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGV  232 (341)
T ss_pred             HHH-hcCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCC
Confidence            775 4557899999987 699999999999996 88 688887888899988999988887765433321     13589


Q ss_pred             cEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCc-----------eeEEE---eccHHHHHHHHHHHHCCCee--Ee
Q 023273          216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA-----------SSFVL---TSDGSILEKLNPYFESGKVK--AI  276 (284)
Q Consensus       216 d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~-----------~~~~~---~~~~~~~~~~~~~~~~g~i~--~~  276 (284)
                      |++||++|+   ...++++|+++|+++.+|....+..           +.+..   ....+.+.++++++++|.+.  +.
T Consensus       233 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~  312 (341)
T cd05281         233 DVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPV  312 (341)
T ss_pred             CEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHh
Confidence            999999975   4788999999999999875432111           11111   11246678899999999875  34


Q ss_pred             eccccc
Q 023273          277 IDPKGL  282 (284)
Q Consensus       277 i~~~~~  282 (284)
                      +.+++|
T Consensus       313 ~~~~~~  318 (341)
T cd05281         313 ITHKLP  318 (341)
T ss_pred             eEEEec
Confidence            555555

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.97  E-value=4.7e-30  Score=226.10  Aligned_cols=235  Identities=27%  Similarity=0.353  Sum_probs=193.0

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..+|++ ..++++ +.+.|.|.++||+|++.++++|++|.....+... .....|.++|||++|+|++.|  ++
T Consensus         1 ~~a~~~~~~~~~-~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~V~~~~--~~   75 (326)
T cd08289           1 FQALVVEKDEDD-VSVSVK-NLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGK-IVKRYPFIPGIDLAGTVVESN--DP   75 (326)
T ss_pred             CeeEEEeccCCc-ceeEEE-EccCCCCCCCeEEEEEEEEecChHHhhhhcCCcc-ccCCCCcCcccceeEEEEEcC--CC
Confidence            999999988875 567888 7888999999999999999999999876643211 112347889999999999854  56


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHh---ccc-CCCCEEEE
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER---SAF-SAGKSILV  156 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~---~~~-~~g~~vlI  156 (284)
                      +|++||+|++....   .+...+|+|++|+.++.+.++++|+++++++++.+++++.||+.++..   ... .++++|+|
T Consensus        76 ~~~~Gd~V~~~~~~---~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI  152 (326)
T cd08289          76 RFKPGDEVIVTSYD---LGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLV  152 (326)
T ss_pred             CCCCCCEEEEcccc---cCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEE
Confidence            79999999987531   112347999999999999999999999999999999999999988742   333 34789999


Q ss_pred             EcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc---ccc-CCCcccEEEeCCCC--cHHHHH
Q 023273          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IED-LPEKFDVVFDAVGQ--CDKALK  230 (284)
Q Consensus       157 ~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~-~~~~~d~vid~~g~--~~~~~~  230 (284)
                      +|++|.+|.+++++|+++ |++++++++++++.+.++++|.+.+++.+...   +.. ..+++|++||++|+  ...+++
T Consensus       153 ~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~  231 (326)
T cd08289         153 TGATGGVGSLAVSILAKL-GYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYLLS  231 (326)
T ss_pred             EcCCchHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHHHHHHHHH
Confidence            998899999999999996 99999999999999999999988888765421   111 13579999999985  578999


Q ss_pred             hhccCCEEEEEcCC
Q 023273          231 AVKEGGRVVSIIGS  244 (284)
Q Consensus       231 ~l~~~G~~v~~g~~  244 (284)
                      +++++|+++.+|..
T Consensus       232 ~l~~~G~~i~~g~~  245 (326)
T cd08289         232 TLQYGGSVAVSGLT  245 (326)
T ss_pred             HhhcCCEEEEEeec
Confidence            99999999999864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.97  E-value=1.4e-29  Score=221.88  Aligned_cols=275  Identities=33%  Similarity=0.527  Sum_probs=220.9

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++..++.+ ..+.+. +.+.|.+.+++++|++.++++|++|.....|.++. ....|.++|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~   77 (325)
T cd08253           1 MRAIRYHEFGAP-DVLRLG-DLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG-LPPLPYVPGSDGAGVVEAVGEGVD   77 (325)
T ss_pred             CceEEEcccCCc-ccceee-ecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC-CCCCCeecccceEEEEEeeCCCCC
Confidence            899999887654 446787 78888899999999999999999999888776532 234678899999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~ga  159 (284)
                      +|++||+|++......    ...|++++|+.++.+.++++|+++++.+++.+++++.+||+++. ..++.+|++++|+|+
T Consensus        78 ~~~~Gd~v~~~~~~~~----~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~  153 (325)
T cd08253          78 GLKVGDRVWLTNLGWG----RRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGG  153 (325)
T ss_pred             CCCCCCEEEEeccccC----CCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcC
Confidence            9999999999753210    13689999999999999999999999999999999999999984 588999999999999


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc------CCCcccEEEeCCCC--cHHHHHh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA  231 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~d~vid~~g~--~~~~~~~  231 (284)
                      ++.+|++++++++.. |.+++++++++++.+.++++|.+.+++....++..      ..+++|++++++|+  ....+++
T Consensus       154 ~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~  232 (325)
T cd08253         154 SGAVGHAAVQLARWA-GARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDV  232 (325)
T ss_pred             CchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHh
Confidence            999999999999995 99999999999999999889988777765433211      13579999999986  4778899


Q ss_pred             hccCCEEEEEcCCCCC----------CceeEEE---e-c----cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          232 VKEGGRVVSIIGSVTP----------PASSFVL---T-S----DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       232 l~~~G~~v~~g~~~~~----------~~~~~~~---~-~----~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      ++++|+++.++.....          ....+..   . .    ..+.++.+.+++.++.+++.+.+.|++
T Consensus       233 l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  302 (325)
T cd08253         233 LAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAREYPL  302 (325)
T ss_pred             hCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccccEEcH
Confidence            9999999999763211          1111111   1 1    124566777788889888777777664

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.97  E-value=2.3e-29  Score=224.24  Aligned_cols=273  Identities=33%  Similarity=0.493  Sum_probs=208.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCC---CCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSL---REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS   77 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~---~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   77 (284)
                      +|++++..++.+   ++++ ..+.|.|   .+++|+|++.++++|++|+....+... .....|.++|+|++|+|+++|+
T Consensus         1 ~~~~~~~~~~~~---~~~~-~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~V~~vG~   75 (352)
T cd08247           1 YKALTFKNNTSP---LTIT-TIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTF-HFKVKEKGLGRDYSGVIVKVGS   75 (352)
T ss_pred             CceEEEecCCCc---ceee-ccCCCCCCCCCCCeEEEEEEEEecChHhHHHhccccc-ccccCCCccCceeEEEEEEeCc
Confidence            588999999887   4555 4455444   899999999999999999987754321 1112367899999999999999


Q ss_pred             CCC-CCCCCCEEEEecCccccCCCCCCCceeeEEeeecC----ceeeCCCCCCHHhhhcccchHHHHHHHHHh-c-ccCC
Q 023273           78 QVK-KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEEN----LLALKPKNLSFVEAASLPLATETAYEGLER-S-AFSA  150 (284)
Q Consensus        78 ~~~-~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~ip~~~~~~~aa~~~~~~~ta~~al~~-~-~~~~  150 (284)
                      +++ .|++||+|++......    ...|+|++|++++..    .++++|+++++.+++.+++++.|||+++.. . ++++
T Consensus        76 ~v~~~~~~Gd~V~~~~~~~~----~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~  151 (352)
T cd08247          76 NVASEWKVGDEVCGIYPHPY----GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGP  151 (352)
T ss_pred             ccccCCCCCCEEEEeecCCC----CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCC
Confidence            998 8999999998753211    136899999999987    789999999999999999999999999854 4 6999


Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCcc----ccc----C--CCcccEEE
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKEN----IED----L--PEKFDVVF  219 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~----~--~~~~d~vi  219 (284)
                      |++|+|+|+++.+|.+++++|+.+++. .++.+. ++++.+.++++|.+.+++.+...    +..    .  .+++|++|
T Consensus       152 g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl  230 (352)
T cd08247         152 DSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLIL  230 (352)
T ss_pred             CCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEE
Confidence            999999999999999999999985354 455554 55666677889988888865433    111    1  46899999


Q ss_pred             eCCCC---cHHHHHhhc---cCCEEEEEcCCC----CCC-------------cee----E-----E---EeccHHHHHHH
Q 023273          220 DAVGQ---CDKALKAVK---EGGRVVSIIGSV----TPP-------------ASS----F-----V---LTSDGSILEKL  264 (284)
Q Consensus       220 d~~g~---~~~~~~~l~---~~G~~v~~g~~~----~~~-------------~~~----~-----~---~~~~~~~~~~~  264 (284)
                      ||+|+   ...++++++   ++|+++.+++..    ...             .+.    +     .   .....+.+..+
T Consensus       231 ~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (352)
T cd08247         231 DCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKC  310 (352)
T ss_pred             ECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHH
Confidence            99986   367899999   999999875322    100             000    0     0   01123578889


Q ss_pred             HHHHHCCCeeEeecccccC
Q 023273          265 NPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       265 ~~~~~~g~i~~~i~~~~~~  283 (284)
                      ++++.+|.+++.++++||+
T Consensus       311 ~~~~~~~~l~~~~~~~~~l  329 (352)
T cd08247         311 AELIADGKVKPPIDSVYPF  329 (352)
T ss_pred             HHHHhCCCeEeeeccEecH
Confidence            9999999999888888875

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=1.2e-29  Score=228.54  Aligned_cols=264  Identities=30%  Similarity=0.377  Sum_probs=202.6

Q ss_pred             eEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC-----CCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEE
Q 023273           16 LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-----TDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG   90 (284)
Q Consensus        16 ~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-----~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~   90 (284)
                      ++++ +.|.|+++++||+|++.++++|++|++.+.+....     ...++|.++|||++|+|+++|+++++|++||+|++
T Consensus        39 ~~~~-~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~  117 (384)
T cd08265          39 LRVE-DVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA  117 (384)
T ss_pred             EEEE-ECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence            7888 88999999999999999999999999887632100     11345788999999999999999999999999986


Q ss_pred             ecCc-------ccc-----------CCCCCCCceeeEEeeecCceeeCCCC-------CCHHhhhcccchHHHHHHHH-H
Q 023273           91 DINE-------KAL-----------DHPKRNGSLAEYTAVEENLLALKPKN-------LSFVEAASLPLATETAYEGL-E  144 (284)
Q Consensus        91 ~~~~-------~~~-----------~~~~~~g~~~~~~~~~~~~~~~ip~~-------~~~~~aa~~~~~~~ta~~al-~  144 (284)
                      .+..       +..           .+...+|+|++|++++.+.++++|+.       ++.+ +++++.++++||+++ .
T Consensus       118 ~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~  196 (384)
T cd08265         118 EEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFI  196 (384)
T ss_pred             CCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHh
Confidence            3211       000           01123689999999999999999986       3444 566777888999998 3


Q ss_pred             h-cccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCc---cccc----C--CC
Q 023273          145 R-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKE---NIED----L--PE  213 (284)
Q Consensus       145 ~-~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~----~--~~  213 (284)
                      . .++++|++|+|+| +|.+|++++++|+.+ |. ++++++++++|.+.++++|.+++++++..   .+..    .  ++
T Consensus       197 ~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~  274 (384)
T cd08265         197 RGGGFRPGAYVVVYG-AGPIGLAAIALAKAA-GASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGW  274 (384)
T ss_pred             hcCCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCC
Confidence            4 6899999999996 799999999999996 88 78888888889999999999888876532   2111    1  45


Q ss_pred             cccEEEeCCCC----cHHHHHhhccCCEEEEEcCCCCCCce----------eEEE---eccHHHHHHHHHHHHCCCeeEe
Q 023273          214 KFDVVFDAVGQ----CDKALKAVKEGGRVVSIIGSVTPPAS----------SFVL---TSDGSILEKLNPYFESGKVKAI  276 (284)
Q Consensus       214 ~~d~vid~~g~----~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~~~---~~~~~~~~~~~~~~~~g~i~~~  276 (284)
                      ++|+++|++|+    ...++++|+++|+++.+|.......+          .+..   ......++++++++++|.+++.
T Consensus       275 gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~  354 (384)
T cd08265         275 GADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMT  354 (384)
T ss_pred             CCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCChH
Confidence            79999999985    26789999999999999754321111          1111   1123578999999999999763


Q ss_pred             --ecccccC
Q 023273          277 --IDPKGLL  283 (284)
Q Consensus       277 --i~~~~~~  283 (284)
                        ++++|++
T Consensus       355 ~~~~~~~~~  363 (384)
T cd08265         355 KIITARFPL  363 (384)
T ss_pred             HheEEEeeH
Confidence              6677764

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=6.7e-30  Score=223.57  Aligned_cols=253  Identities=27%  Similarity=0.317  Sum_probs=202.1

Q ss_pred             eEEeccccCCCCCCCeEEEEEeEeecCHHHHHHH-cCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEecCc
Q 023273           16 LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM-LGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINE   94 (284)
Q Consensus        16 ~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~-~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~   94 (284)
                      ++++ +.+.|++.++||+|++.++++|++|...+ .|..+......|.++|+|++|+|+.+|++++++++||+|++..  
T Consensus         7 ~~~~-~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~--   83 (312)
T cd08269           7 FEVE-EHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS--   83 (312)
T ss_pred             eEEE-ECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec--
Confidence            7888 78889999999999999999999999887 6654322223477899999999999999999999999999864  


Q ss_pred             cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHh
Q 023273           95 KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHV  174 (284)
Q Consensus        95 ~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~  174 (284)
                              .|+|++|++++.+.++++|+++  ..++....++.++++++...+++++++++|+| +|.+|.+++++|+.+
T Consensus        84 --------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~la~~~  152 (312)
T cd08269          84 --------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRGWIRAGKTVAVIG-AGFIGLLFLQLAAAA  152 (312)
T ss_pred             --------CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc
Confidence                    5899999999999999999998  22222236778899988888899999999997 799999999999996


Q ss_pred             cCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCC
Q 023273          175 FGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       175 ~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~  244 (284)
                       |++ ++++.+++++.+.++++|.+.+++.+...+..    .  .+++|++|||.|.   ...++++|+++|+++.+|..
T Consensus       153 -g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~  231 (312)
T cd08269         153 -GARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYH  231 (312)
T ss_pred             -CCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccC
Confidence             988 98888888899988999988887754433222    1  3579999999874   47899999999999999854


Q ss_pred             CC-CCc----------eeEEE---e---ccHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273          245 VT-PPA----------SSFVL---T---SDGSILEKLNPYFESGKVKA--IIDPKGLL  283 (284)
Q Consensus       245 ~~-~~~----------~~~~~---~---~~~~~~~~~~~~~~~g~i~~--~i~~~~~~  283 (284)
                      .. +..          .++..   .   ...+.++++++++++|.+++  .+.++|++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  289 (312)
T cd08269         232 QDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPL  289 (312)
T ss_pred             CCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecH
Confidence            31 111          11111   0   12468999999999999987  46677764

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=3.5e-29  Score=219.94  Aligned_cols=271  Identities=38%  Similarity=0.551  Sum_probs=217.3

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..++. ...++++ +.+.|++.+++++|++.++++|++|+....+.++.  ...|.++|||++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~-~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~   76 (325)
T cd08271           1 MKAWVLPKPGA-ALQLTLE-EIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA--WSYPHVPGVDGAGVVVAVGAKVT   76 (325)
T ss_pred             CeeEEEccCCC-cceeEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCcccccceEEEEEEeCCCCC
Confidence            99999999984 2347898 88999999999999999999999999887775421  12367899999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga  159 (284)
                      ++++||+|++...      ....|+|++|+.++.+.++++|++++..+++.+.+.+.++|+++ +..++.+|++++|+|+
T Consensus        77 ~~~~Gd~V~~~~~------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~  150 (325)
T cd08271          77 GWKVGDRVAYHAS------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGG  150 (325)
T ss_pred             cCCCCCEEEeccC------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECC
Confidence            9999999998742      11358999999999999999999999999999999999999998 5678899999999998


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc------CCCcccEEEeCCCC--cHHHHHh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA  231 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~d~vid~~g~--~~~~~~~  231 (284)
                      ++.+|++++++++.. |++++++. ++++.+.++++|.+.+++.....+..      ..+++|++++++++  ...++++
T Consensus       151 ~~~ig~~~~~~a~~~-g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~  228 (325)
T cd08271         151 AGGVGSFAVQLAKRA-GLRVITTC-SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPT  228 (325)
T ss_pred             ccHHHHHHHHHHHHc-CCEEEEEE-cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHh
Confidence            899999999999995 99988877 67788888889988787765433221      13579999999885  3678999


Q ss_pred             hccCCEEEEEcCCCCC-------CceeE---EE------e------ccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          232 VKEGGRVVSIIGSVTP-------PASSF---VL------T------SDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       232 l~~~G~~v~~g~~~~~-------~~~~~---~~------~------~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      ++++|+++.++.....       ....+   ..      .      ...+.+.+++++++++.+++...++|++
T Consensus       229 l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  302 (325)
T cd08271         229 LAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPF  302 (325)
T ss_pred             hccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcH
Confidence            9999999998654211       11111   11      0      1124567888999999998876666653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.97  E-value=1.3e-29  Score=224.72  Aligned_cols=271  Identities=27%  Similarity=0.382  Sum_probs=206.8

Q ss_pred             EEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHc-CCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 023273            5 VYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRML-GAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK   83 (284)
Q Consensus         5 ~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   83 (284)
                      ++++.+.    ++++ +.+.|+++++||+|++.++++|++|..... |.++.....+|.++|+|++|+|+++|+++++|+
T Consensus         2 ~~~~~~~----~~~~-~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~   76 (339)
T cd08232           2 VIHAAGD----LRVE-ERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLA   76 (339)
T ss_pred             eeccCCc----eEEE-EcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCC
Confidence            4555554    6888 788999999999999999999999988763 433222234577899999999999999999999


Q ss_pred             CCCEEEEecCcccc------------------CC-----CCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHH
Q 023273           84 VGDEVYGDINEKAL------------------DH-----PKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY  140 (284)
Q Consensus        84 ~Gd~V~~~~~~~~~------------------~~-----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  140 (284)
                      +||+|++.+.....                  .+     ...+|+|++|++++.+.++++|++++.++++. ..++.++|
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~  155 (339)
T cd08232          77 PGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVAL  155 (339)
T ss_pred             CCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHH
Confidence            99999874210000                  00     12369999999999999999999999888765 57778999


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc---CCCccc
Q 023273          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED---LPEKFD  216 (284)
Q Consensus       141 ~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~d  216 (284)
                      +++......++++|+|.| +|.+|.+++++|+.+ |. ++++++.++++.+.+++++.+++++++...+..   ..+++|
T Consensus       156 ~~l~~~~~~~~~~VLI~g-~g~vG~~~~~lak~~-G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~vd  233 (339)
T cd08232         156 HAVNRAGDLAGKRVLVTG-AGPIGALVVAAARRA-GAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFD  233 (339)
T ss_pred             HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCcc
Confidence            998654434999999987 799999999999996 87 788888888888888999988888876443222   234699


Q ss_pred             EEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC----------ceeEEE-eccHHHHHHHHHHHHCCCeeE--eeccc
Q 023273          217 VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL-TSDGSILEKLNPYFESGKVKA--IIDPK  280 (284)
Q Consensus       217 ~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~-~~~~~~~~~~~~~~~~g~i~~--~i~~~  280 (284)
                      ++||+.|.   ...++++|+++|+++.++....+.          .+.+.. ....+.++++++++++|.+++  .+.++
T Consensus       234 ~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  313 (339)
T cd08232         234 VVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAV  313 (339)
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEE
Confidence            99999984   478999999999999987543111          111111 123567899999999998853  46677


Q ss_pred             ccC
Q 023273          281 GLL  283 (284)
Q Consensus       281 ~~~  283 (284)
                      |++
T Consensus       314 ~~~  316 (339)
T cd08232         314 FPL  316 (339)
T ss_pred             ecH
Confidence            664

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.97  E-value=4.6e-29  Score=223.34  Aligned_cols=275  Identities=25%  Similarity=0.321  Sum_probs=204.9

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC-CCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      |+++++..+..    ++++ +.+.|.|.++||+|++.++++|++|.+.+.+.... ....+|.++|||++|+|+++|+++
T Consensus        18 ~~~~~~~~~~~----l~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
T PLN02702         18 NMAAWLVGVNT----LKIQ-PFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEV   92 (364)
T ss_pred             cceEEEecCCc----eEEE-eccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCC
Confidence            34555555543    6887 77888899999999999999999999988763211 112357789999999999999999


Q ss_pred             CCCCCCCEEEEecCccc-------------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHH
Q 023273           80 KKFKVGDEVYGDINEKA-------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY  140 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~-------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  140 (284)
                      ++|++||+|++.+....                   ......+|+|++|+.++...++++|+++++.++++. .++.+++
T Consensus        93 ~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~  171 (364)
T PLN02702         93 KHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGV  171 (364)
T ss_pred             CCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHH
Confidence            99999999987421000                   000123689999999999999999999998887752 2344588


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCC--Cccccc-------
Q 023273          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYT--KENIED-------  210 (284)
Q Consensus       141 ~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~-------  210 (284)
                      +++...++.++++|+|+| +|++|++++++|+.+ |++ +++++.+++|.+.++++|++..++..  ..++..       
T Consensus       172 ~~~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  249 (364)
T PLN02702        172 HACRRANIGPETNVLVMG-AGPIGLVTMLAARAF-GAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQK  249 (364)
T ss_pred             HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhh
Confidence            888778889999999997 799999999999996 875 66677788889989999988776542  122211       


Q ss_pred             -CCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC----------ceeEEE-eccHHHHHHHHHHHHCCCee-
Q 023273          211 -LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL-TSDGSILEKLNPYFESGKVK-  274 (284)
Q Consensus       211 -~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~-~~~~~~~~~~~~~~~~g~i~-  274 (284)
                       ..+++|++||++|+   ...++++|+++|+++.+|......          .+++.. ......++.++++++++.+. 
T Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~  329 (364)
T PLN02702        250 AMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKIDV  329 (364)
T ss_pred             hcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHHHHHHHHHHcCCCCc
Confidence             13579999999984   489999999999999998532111          111111 12346788999999999885 


Q ss_pred             -EeecccccC
Q 023273          275 -AIIDPKGLL  283 (284)
Q Consensus       275 -~~i~~~~~~  283 (284)
                       +.++++|+|
T Consensus       330 ~~~~~~~~~l  339 (364)
T PLN02702        330 KPLITHRFGF  339 (364)
T ss_pred             hHheEEEecc
Confidence             456777553

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.97  E-value=3.6e-29  Score=220.96  Aligned_cols=273  Identities=32%  Similarity=0.426  Sum_probs=216.3

Q ss_pred             eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (284)
Q Consensus         2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   81 (284)
                      |+++++.+|..   ++++ +.|.|.+.+++++|++.++++|++|...+.|.++.  ..+|.++|||++|+|+++|+++++
T Consensus         1 ~~~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~p~~~g~e~~G~v~~~g~~~~~   74 (330)
T cd08245           1 KAAVVHAAGGP---LEPE-EVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG--SKYPLVPGHEIVGEVVEVGAGVEG   74 (330)
T ss_pred             CeEEEecCCCC---ceEE-eccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC--CCCCcccCccceEEEEEECCCCcc
Confidence            68899988654   7888 88889899999999999999999999998886532  245778999999999999999999


Q ss_pred             CCCCCEEEEec-----Ccccc--------------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273           82 FKVGDEVYGDI-----NEKAL--------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (284)
Q Consensus        82 ~~~Gd~V~~~~-----~~~~~--------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (284)
                      |++||+|+..+     +.+..              .+....|+|++|+.++.+.++++|+++++.+++.+.+.+.|||++
T Consensus        75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~  154 (330)
T cd08245          75 RKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA  154 (330)
T ss_pred             cccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHH
Confidence            99999998431     11000              011236899999999999999999999999999999999999999


Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc-cCCCcccEEEeC
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE-DLPEKFDVVFDA  221 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~d~vid~  221 (284)
                      +...++.++++|+|+| +|.+|++++++|+.+ |.+++++++++++.+.++++|.+.+++....... ...+++|+++++
T Consensus       155 l~~~~~~~~~~vlI~g-~g~iG~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~  232 (330)
T cd08245         155 LRDAGPRPGERVAVLG-IGGLGHLAVQYARAM-GFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVT  232 (330)
T ss_pred             HHhhCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEEEEC
Confidence            9768899999999997 677999999999996 9999999999999999999998877776433221 123579999999


Q ss_pred             CCC---cHHHHHhhccCCEEEEEcCCCCCC----ceeEE---------EeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          222 VGQ---CDKALKAVKEGGRVVSIIGSVTPP----ASSFV---------LTSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       222 ~g~---~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~---------~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +++   ...++++|+++|+++.++......    ...+.         .......++++++++.++.+.+.+ ++||+
T Consensus       233 ~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~-~~~~~  309 (330)
T cd08245         233 VVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPMI-ETFPL  309 (330)
T ss_pred             CCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcceE-EEEcH
Confidence            774   478899999999999997542111    01110         011457888999999999987643 45553

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=5.6e-29  Score=217.44  Aligned_cols=267  Identities=34%  Similarity=0.444  Sum_probs=215.9

Q ss_pred             eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (284)
Q Consensus         2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   81 (284)
                      ||+.+..++.+ ..+.+. +.+.+.+.++|++|++.++++|++|++...+.++   ..+|.++|||++|+|+.+|+++.+
T Consensus         1 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~---~~~~~~~g~e~~G~v~~~g~~~~~   75 (320)
T cd05286           1 KAVRIHKTGGP-EVLEYE-DVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP---LPLPFVLGVEGAGVVEAVGPGVTG   75 (320)
T ss_pred             CeEEEecCCCc-cceEEe-ecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC---CCCCccCCcceeEEEEEECCCCCC
Confidence            56777777765 456776 6666778999999999999999999998877653   234678999999999999999999


Q ss_pred             CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 023273           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA  160 (284)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~  160 (284)
                      +++||+|++..         ..|+|++|+.++.+.++++|++++..+++.+++...++|+++ ...++.+|++|+|+|++
T Consensus        76 ~~~G~~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~  146 (320)
T cd05286          76 FKVGDRVAYAG---------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAA  146 (320)
T ss_pred             CCCCCEEEEec---------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence            99999999863         158999999999999999999999999998999999999998 46889999999999999


Q ss_pred             chHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHhh
Q 023273          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKAV  232 (284)
Q Consensus       161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~l  232 (284)
                      |++|++++++++.+ |+++++++.++++.+.++++|.+.+++.....+..    .  .+++|++|+|+++  ...+++++
T Consensus       147 g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l  225 (320)
T cd05286         147 GGVGLLLTQWAKAL-GATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSL  225 (320)
T ss_pred             chHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhh
Confidence            99999999999996 99999999999999999999988887765433221    1  3579999999885  47889999


Q ss_pred             ccCCEEEEEcCCCCC-----------CceeEEE------ecc----HHHHHHHHHHHHCCCeeEeecccccC
Q 023273          233 KEGGRVVSIIGSVTP-----------PASSFVL------TSD----GSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       233 ~~~G~~v~~g~~~~~-----------~~~~~~~------~~~----~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +++|+++.+|.....           ..+.+..      ...    .+.++++++++.++.+++.+.+.|++
T Consensus       226 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  297 (320)
T cd05286         226 RPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRYPL  297 (320)
T ss_pred             ccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcH
Confidence            999999999754321           1122210      011    24566788899999988777676653

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.97  E-value=1.7e-29  Score=224.06  Aligned_cols=269  Identities=27%  Similarity=0.326  Sum_probs=204.2

Q ss_pred             cccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCC-CCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023273            7 KEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQVKKFKVG   85 (284)
Q Consensus         7 ~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   85 (284)
                      +.++..   ++++ +.|.|.|+++|++|++.++++|++|...+.+.. .....++|.++|+|++|+|+++|+++++|++|
T Consensus         5 ~~~~~~---~~l~-~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   80 (340)
T TIGR00692         5 TKPGYG---AELT-EVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVG   80 (340)
T ss_pred             ccCCCC---cEEE-ECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCC
Confidence            456655   7888 788899999999999999999999998765541 11122356689999999999999999999999


Q ss_pred             CEEEEecCc-------cc-----------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcc
Q 023273           86 DEVYGDINE-------KA-----------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA  147 (284)
Q Consensus        86 d~V~~~~~~-------~~-----------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~  147 (284)
                      |+|++....       +.           ..+....|+|++|++++.+.++++|++++.+. ++++.++.++++++ ...
T Consensus        81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~-a~~~~~~~~a~~~~-~~~  158 (340)
T TIGR00692        81 DYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEY-ATIQEPLGNAVHTV-LAG  158 (340)
T ss_pred             CEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHh-hhhcchHHHHHHHH-Hcc
Confidence            999884210       00           00112468999999999999999999999854 45677888888876 445


Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEe
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFD  220 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid  220 (284)
                      ..+|++++|.| +|.+|.+++++|+.+ |.+ ++++..++++.+.++++|.+.+++.....+.+    .  .+++|++||
T Consensus       159 ~~~g~~vlI~~-~g~vg~~a~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld  236 (340)
T TIGR00692       159 PISGKSVLVTG-AGPIGLMAIAVAKAS-GAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLE  236 (340)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEE
Confidence            67999999976 799999999999996 886 87887788899988999988888765443221    1  357999999


Q ss_pred             CCCC---cHHHHHhhccCCEEEEEcCCCCCCc-----------eeEEE---eccHHHHHHHHHHHHCCCee--Eeecccc
Q 023273          221 AVGQ---CDKALKAVKEGGRVVSIIGSVTPPA-----------SSFVL---TSDGSILEKLNPYFESGKVK--AIIDPKG  281 (284)
Q Consensus       221 ~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~-----------~~~~~---~~~~~~~~~~~~~~~~g~i~--~~i~~~~  281 (284)
                      ++|+   ...++++|+++|+++.+|.......           +.+..   ....+.+.++++++++|.++  +.+.+++
T Consensus       237 ~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~  316 (340)
T TIGR00692       237 MSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKF  316 (340)
T ss_pred             CCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeee
Confidence            9874   4778999999999999986421111           11111   12346678899999999986  4566666


Q ss_pred             cC
Q 023273          282 LL  283 (284)
Q Consensus       282 ~~  283 (284)
                      |+
T Consensus       317 ~l  318 (340)
T TIGR00692       317 KF  318 (340)
T ss_pred             eH
Confidence            53

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=7e-29  Score=217.47  Aligned_cols=270  Identities=43%  Similarity=0.645  Sum_probs=211.6

Q ss_pred             EEcccCCCccc-eEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCC-CCCCCcccccceeEEEEEeCCCCCCC
Q 023273            5 VYKEYGNSQSV-LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT-DSPLPTIPGYDVAGVVEKVGSQVKKF   82 (284)
Q Consensus         5 ~~~~~g~~~~~-~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~   82 (284)
                      +++..++..+. ++++ +.+.|.|.++||+|++.++++|++|.+...|.++.. ....|..+|||++|+|+++|+++.++
T Consensus         2 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~   80 (319)
T cd08267           2 VYTRYGSPEVLLLLEV-EVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRF   80 (319)
T ss_pred             eeCCCCChhhhhhccc-cCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCC
Confidence            44555655222 2777 778888999999999999999999999887764211 12346689999999999999999999


Q ss_pred             CCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEcCCc
Q 023273           83 KVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGGAG  161 (284)
Q Consensus        83 ~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~ga~g  161 (284)
                      ++||+|++....      ...|+|++|+.++.+.++++|+++++.+++.+++++.+||+++. ..++.++++|+|+|++|
T Consensus        81 ~~Gd~V~~~~~~------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g  154 (319)
T cd08267          81 KVGDEVFGRLPP------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASG  154 (319)
T ss_pred             CCCCEEEEeccC------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence            999999986421      12589999999999999999999999999999999999999985 45689999999999889


Q ss_pred             hHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc---cCCCcccEEEeCCCC--c--HHHHHhhcc
Q 023273          162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---DLPEKFDVVFDAVGQ--C--DKALKAVKE  234 (284)
Q Consensus       162 ~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~d~vid~~g~--~--~~~~~~l~~  234 (284)
                      ++|++++++|+.+ |+++++++.+ ++.+.++++|.+.+++.....+.   ...+++|++++|+|+  .  ...+..+++
T Consensus       155 ~~g~~~~~la~~~-g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~  232 (319)
T cd08267         155 GVGTFAVQIAKAL-GAHVTGVCST-RNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKP  232 (319)
T ss_pred             HHHHHHHHHHHHc-CCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccCC
Confidence            9999999999996 9999988865 88888899998777776544331   224579999999983  2  333334999


Q ss_pred             CCEEEEEcCCCCCCc--e------------eE---EEeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          235 GGRVVSIIGSVTPPA--S------------SF---VLTSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       235 ~G~~v~~g~~~~~~~--~------------~~---~~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +|+++.+|.......  .            .+   ......+.+.+++++++++.+++.++++|++
T Consensus       233 ~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  298 (319)
T cd08267         233 GGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPVIDSVYPL  298 (319)
T ss_pred             CCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCeeeeeeeEEcH
Confidence            999999986532110  0            00   1112367899999999999999888888774

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.97  E-value=1.1e-29  Score=211.03  Aligned_cols=244  Identities=28%  Similarity=0.376  Sum_probs=196.0

Q ss_pred             cceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCC-CCCcccccce----eEEEEEeCCCCCCCCCCCEE
Q 023273           14 SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS-PLPTIPGYDV----AGVVEKVGSQVKKFKVGDEV   88 (284)
Q Consensus        14 ~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~-~~p~~~G~e~----~G~V~~vG~~~~~~~~Gd~V   88 (284)
                      +.++++ +.+.|+|++|||++|.+|.+++|..    +|++...+. ..|..+|-.+    +|+|++  |+..+|++||.|
T Consensus        25 d~F~le-e~~vp~p~~GqvLl~~~ylS~DPym----Rgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~--S~~~~f~~GD~V   97 (340)
T COG2130          25 DDFRLE-EVDVPEPGEGQVLLRTLYLSLDPYM----RGRMSDAPSYAPPVELGEVMVGGTVAKVVA--SNHPGFQPGDIV   97 (340)
T ss_pred             CCceeE-eccCCCCCcCceEEEEEEeccCHHH----eecccCCcccCCCcCCCceeECCeeEEEEe--cCCCCCCCCCEE
Confidence            458999 8999999999999999999999953    444332222 3445566554    455554  778899999999


Q ss_pred             EEecCccccCCCCCCCceeeEEeeecCceeeCCCCC-CH-HhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHH
Q 023273           89 YGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNL-SF-VEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGT  165 (284)
Q Consensus        89 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~-~~-~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~  165 (284)
                      .+.            .+|++|...+.+.+.++++.. ++ .....+.++..|||.++ +.+.+++|++|+|.+|+|++|.
T Consensus        98 ~~~------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGs  165 (340)
T COG2130          98 VGV------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGS  165 (340)
T ss_pred             Eec------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccch
Confidence            884            589999999999999998653 22 33345688889999998 6899999999999999999999


Q ss_pred             HHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeCCCcccccC-----CCcccEEEeCCCC--cHHHHHhhccCCE
Q 023273          166 MVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIEDL-----PEKFDVVFDAVGQ--CDKALKAVKEGGR  237 (284)
Q Consensus       166 ~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~-----~~~~d~vid~~g~--~~~~~~~l~~~G~  237 (284)
                      .+.|+||. .|++|+.+..++||++++++ +|.+.++|++.+++.+.     ++|+|++||++|+  +++.+..|+.++|
T Consensus       166 vvgQiAKl-kG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aR  244 (340)
T COG2130         166 VVGQIAKL-KGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFAR  244 (340)
T ss_pred             HHHHHHHh-hCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhccccc
Confidence            99999998 59999999999999999987 99999999998876653     7899999999996  6999999999999


Q ss_pred             EEEEcCCC---C------CCceeE-----------EEec----c-HHHHHHHHHHHHCCCeeEee
Q 023273          238 VVSIIGSV---T------PPASSF-----------VLTS----D-GSILEKLNPYFESGKVKAII  277 (284)
Q Consensus       238 ~v~~g~~~---~------~~~~~~-----------~~~~----~-~~~~~~~~~~~~~g~i~~~i  277 (284)
                      ++.||.-+   .      ++.+.+           ...+    + .+.++++.+|+++|+|+..-
T Consensus       245 i~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e  309 (340)
T COG2130         245 IPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE  309 (340)
T ss_pred             eeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe
Confidence            99997632   1      111111           1101    2 37889999999999998764

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.97  E-value=9e-29  Score=216.91  Aligned_cols=270  Identities=35%  Similarity=0.510  Sum_probs=216.6

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++.+..++.+ ..+++. +.+.+.+++++++|++.++++|++|.....+.++.. ..+|.++|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~vg~~~~   77 (325)
T TIGR02824         1 MKAIEITEPGGP-EVLVLV-EVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPP-PGASDILGLEVAGEVVAVGEGVS   77 (325)
T ss_pred             CceEEEccCCCc-ccceEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCCCCccceeEEEEEEeCCCCC
Confidence            899999887765 556776 566667899999999999999999999887765321 23467899999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga  159 (284)
                      ++++||+|++...         .|+|++|+.++.+.++++|+++++.+++.+++++.|+|+++ ...++.++++++|+|+
T Consensus        78 ~~~~Gd~V~~~~~---------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~  148 (325)
T TIGR02824        78 RWKVGDRVCALVA---------GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGG  148 (325)
T ss_pred             CCCCCCEEEEccC---------CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            9999999998642         48999999999999999999999989999999999999987 5788999999999999


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-----C-CCcccEEEeCCCC--cHHHHHh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----L-PEKFDVVFDAVGQ--CDKALKA  231 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~-~~~~d~vid~~g~--~~~~~~~  231 (284)
                      +|++|.+++++++.. |++++++.+++++.+.++++|.+.+++.....+..     . .+++|++++++|+  ...++++
T Consensus       149 ~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~  227 (325)
T TIGR02824       149 ASGIGTTAIQLAKAF-GARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKA  227 (325)
T ss_pred             cchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHh
Confidence            999999999999995 99999999999988888888877776654332211     1 3579999999885  4788999


Q ss_pred             hccCCEEEEEcCCCC-----------CCceeEEE---ec---------cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          232 VKEGGRVVSIIGSVT-----------PPASSFVL---TS---------DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       232 l~~~G~~v~~g~~~~-----------~~~~~~~~---~~---------~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      ++++|+++.++....           .+...+..   ..         ....+.+++++++++.+++.+++.|++
T Consensus       228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  302 (325)
T TIGR02824       228 LALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPL  302 (325)
T ss_pred             hccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeH
Confidence            999999999975431           11111111   01         123456778899999988777776653

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08251 polyketide_synthase polyketide synthase

Probab=99.97  E-value=4.3e-29  Score=216.97  Aligned_cols=251  Identities=32%  Similarity=0.493  Sum_probs=207.0

Q ss_pred             CCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCC
Q 023273           24 VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRN  103 (284)
Q Consensus        24 ~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~  103 (284)
                      .|.+.+++++|++.++++|++|+....+.++. ...+|.++|+|++|+|+++|+++.++++||+|++...       ..+
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-------~~~   73 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT-MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG-------ESM   73 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC-CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-------CCC
Confidence            46788999999999999999999998886542 2345788999999999999999999999999998752       236


Q ss_pred             CceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEe
Q 023273          104 GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT  183 (284)
Q Consensus       104 g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~  183 (284)
                      |+|++|+.++.+.++++|+++++.+++.++..+.|||+++...++++|++++|+++++.+|.+++++++.+ |+++++++
T Consensus        74 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~-g~~v~~~~  152 (303)
T cd08251          74 GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLK-GAEIYATA  152 (303)
T ss_pred             cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEc
Confidence            89999999999999999999999999999999999999998889999999999999999999999999996 99999999


Q ss_pred             CChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCCC--C-----
Q 023273          184 SSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP--P-----  248 (284)
Q Consensus       184 ~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~~--~-----  248 (284)
                      +++++.+.++++|.+.+++....++..    .  .+++|+++|++++  ...++++++++|+++.++.....  .     
T Consensus       153 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~  232 (303)
T cd08251         153 SSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLS  232 (303)
T ss_pred             CCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChh
Confidence            999999999999988888765433221    1  3579999999874  47889999999999998754311  1     


Q ss_pred             ----ceeEE---Ee----c----cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          249 ----ASSFV---LT----S----DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       249 ----~~~~~---~~----~----~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                          ...+.   +.    .    ..+.+.++++++.+|.+++.+.+.|++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  282 (303)
T cd08251         233 VLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPF  282 (303)
T ss_pred             HhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcH
Confidence                11111   10    0    124578888999999998877777764

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.97  E-value=1.4e-29  Score=218.71  Aligned_cols=219  Identities=22%  Similarity=0.250  Sum_probs=173.1

Q ss_pred             ccccceeEEEEEeCCCCC------CCCCCCEEEEecC----ccc--------------cCC-------CCCCCceeeEEe
Q 023273           63 IPGYDVAGVVEKVGSQVK------KFKVGDEVYGDIN----EKA--------------LDH-------PKRNGSLAEYTA  111 (284)
Q Consensus        63 ~~G~e~~G~V~~vG~~~~------~~~~Gd~V~~~~~----~~~--------------~~~-------~~~~g~~~~~~~  111 (284)
                      ++|||++|+|+++|++++      ++++||||+..+.    .+.              ..+       ...+|+|+||++
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            479999999999999998      8999999976431    100              000       113699999999


Q ss_pred             eecC-ceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhH
Q 023273          112 VEEN-LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKL  189 (284)
Q Consensus       112 ~~~~-~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~  189 (284)
                      +|++ .++++|+++++++++.+++.+.|+|++++.....++++|+|+| +|++|++++++|+.+ |++ |++++++++|.
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-~G~vG~~~~~~ak~~-G~~~Vi~~~~~~~r~  158 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVG-AGMLGLTAAAAAAAA-GAARVVAADPSPDRR  158 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHH
Confidence            9997 7999999999999999998999999999777777999999998 699999999999996 876 88888899999


Q ss_pred             HHHHHcCCcEEeeCCCcc--cccC--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCC--CCCcee---------
Q 023273          190 DLLRSLGADLAIDYTKEN--IEDL--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV--TPPASS---------  251 (284)
Q Consensus       190 ~~~~~~g~~~~~~~~~~~--~~~~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~--~~~~~~---------  251 (284)
                      +.++++|++.+++.+...  ..+.  ..++|++||++|+   .+.++++++++|+++.+|...  .+..++         
T Consensus       159 ~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~~  238 (280)
T TIGR03366       159 ELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRWL  238 (280)
T ss_pred             HHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCCc
Confidence            999999998888764321  1111  3579999999985   478999999999999998643  121111         


Q ss_pred             -E--EEeccHHHHHHHHHHHHCC--Ce--eEeecccccC
Q 023273          252 -F--VLTSDGSILEKLNPYFESG--KV--KAIIDPKGLL  283 (284)
Q Consensus       252 -~--~~~~~~~~~~~~~~~~~~g--~i--~~~i~~~~~~  283 (284)
                       +  +.....+++++++++++++  ++  +++|+++|||
T Consensus       239 ~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l  277 (280)
T TIGR03366       239 TIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPL  277 (280)
T ss_pred             EEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhccccc
Confidence             1  1122467899999999974  43  4679999987

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=2.1e-28  Score=214.84  Aligned_cols=275  Identities=33%  Similarity=0.451  Sum_probs=217.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++...+.+ ..+++. +.+.|.+.+++++|++.++++|++|.....|.++.. ...|..+|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~~~   77 (328)
T cd08268           1 MRAVRFHQFGGP-EVLRIE-ELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP-PPLPARLGYEAAGVVEAVGAGVT   77 (328)
T ss_pred             CeEEEEeccCCc-ceeEEe-ecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC-CCCCCCCCcceEEEEEeeCCCCC
Confidence            899999987765 457777 677778899999999999999999998877765322 24467899999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga  159 (284)
                      +|++||+|++++..    .....|++++|+.++.+.++++|++++..+++.+++.+.++|+++ ....+.++++++|+|+
T Consensus        78 ~~~~Gd~V~~~~~~----~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~  153 (328)
T cd08268          78 GFAVGDRVSVIPAA----DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAA  153 (328)
T ss_pred             cCCCCCEEEecccc----ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence            99999999987421    112358999999999999999999999999999999999999998 4678889999999999


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKA  231 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~  231 (284)
                      +|.+|++++++++.. |+++++++.++++.+.++++|.+.+++.+...+..    .  .+++|++++++|+  ...++++
T Consensus       154 ~~~~g~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~  232 (328)
T cd08268         154 SSSVGLAAIQIANAA-GATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADA  232 (328)
T ss_pred             ccHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHh
Confidence            999999999999995 99999999999999988888887777765433221    1  3479999999885  4788999


Q ss_pred             hccCCEEEEEcCCCCC-----------CceeEEE---e---c----cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          232 VKEGGRVVSIIGSVTP-----------PASSFVL---T---S----DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       232 l~~~G~~v~~g~~~~~-----------~~~~~~~---~---~----~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      ++++|+++.+|....+           .+..+..   .   .    ....++.+.+++.++.+++.+.++|++
T Consensus       233 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (328)
T cd08268         233 LAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVDRVFPF  305 (328)
T ss_pred             hccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcccEEcH
Confidence            9999999998754211           1111111   0   0    123455666677888888777677664

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.97  E-value=3e-28  Score=214.85  Aligned_cols=265  Identities=28%  Similarity=0.328  Sum_probs=204.8

Q ss_pred             eEEEEcccCC---CccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC-CCCCCCcccccceeEEEEEeCC
Q 023273            2 KAWVYKEYGN---SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGS   77 (284)
Q Consensus         2 ~a~~~~~~g~---~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~   77 (284)
                      |++++...++   ....++++ +.+.|++.+++|+|++.++++|++|.....+.... .+...+.++|+|++|+|+++|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~   81 (329)
T cd05288           3 RQVVLAKRPEGPPPPDDFELV-EVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS   81 (329)
T ss_pred             cEEEEeccCCCCCCccceeEE-eccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence            5677765552   22568998 88999999999999999999999887655443111 1122346789999999999996


Q ss_pred             CCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeec-CceeeCCCCCC--HHhhhc-ccchHHHHHHHH-HhcccCCCC
Q 023273           78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEE-NLLALKPKNLS--FVEAAS-LPLATETAYEGL-ERSAFSAGK  152 (284)
Q Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~ip~~~~--~~~aa~-~~~~~~ta~~al-~~~~~~~g~  152 (284)
                      +  ++++||+|+++            ++|++|+.++. +.++++|++++  ..++++ +++++.|||+++ ....+.+++
T Consensus        82 ~--~~~~Gd~V~~~------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~  147 (329)
T cd05288          82 P--DFKVGDLVSGF------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGE  147 (329)
T ss_pred             C--CCCCCCEEecc------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCC
Confidence            4  79999999873            47999999999 99999999984  445555 888999999998 457889999


Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeCCCccccc-----CCCcccEEEeCCCC--
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--  224 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g~--  224 (284)
                      +|+|+|++|.+|++++++|+.. |++++++++++++.+.+++ +|.+.+++.+..++..     ..+++|++|||+|+  
T Consensus       148 ~vlI~g~~g~ig~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~~  226 (329)
T cd05288         148 TVVVSAAAGAVGSVVGQIAKLL-GARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGEI  226 (329)
T ss_pred             EEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchHHH
Confidence            9999999999999999999995 9999999999999999988 8988888876533221     13579999999986  


Q ss_pred             cHHHHHhhccCCEEEEEcCCCCCC----------------ceeEEE---ecc----HHHHHHHHHHHHCCCeeEeecccc
Q 023273          225 CDKALKAVKEGGRVVSIIGSVTPP----------------ASSFVL---TSD----GSILEKLNPYFESGKVKAIIDPKG  281 (284)
Q Consensus       225 ~~~~~~~l~~~G~~v~~g~~~~~~----------------~~~~~~---~~~----~~~~~~~~~~~~~g~i~~~i~~~~  281 (284)
                      ...++++++++|+++.+|......                ...+..   ...    .+.+.++++++.+|.+++...+++
T Consensus       227 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~  306 (329)
T cd05288         227 LDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVE  306 (329)
T ss_pred             HHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccc
Confidence            478899999999999997543110                111111   111    256788999999999887644444


Q ss_pred             c
Q 023273          282 L  282 (284)
Q Consensus       282 ~  282 (284)
                      +
T Consensus       307 ~  307 (329)
T cd05288         307 G  307 (329)
T ss_pred             c
Confidence            4

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=1.3e-27  Score=209.28  Aligned_cols=269  Identities=40%  Similarity=0.554  Sum_probs=216.1

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCC-CCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~-~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      ||++++..++.. ..+++. +.+ |.+. +++++|++.++++|++|+....|.+.. ....|..+|||++|+|+.+|+++
T Consensus         1 ~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~   76 (323)
T cd08241           1 MKAVVCKELGGP-EDLVLE-EVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV-KPPLPFVPGSEVAGVVEAVGEGV   76 (323)
T ss_pred             CeEEEEecCCCc-ceeEEe-cCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC-CCCCCCcccceeEEEEEEeCCCC
Confidence            899999877665 457777 666 6666 599999999999999999988776531 12345679999999999999999


Q ss_pred             CCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEc
Q 023273           80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLG  158 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g  158 (284)
                      .++++||+|+++..         .|+|++|+.++.+.++++|++++..+++.+..++.+||+++. ..++.++++++|+|
T Consensus        77 ~~~~~G~~V~~~~~---------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g  147 (323)
T cd08241          77 TGFKVGDRVVALTG---------QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLG  147 (323)
T ss_pred             CCCCCCCEEEEecC---------CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEc
Confidence            99999999999751         589999999999999999999998888888889999999984 68899999999999


Q ss_pred             CCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHH
Q 023273          159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALK  230 (284)
Q Consensus       159 a~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~  230 (284)
                      ++|.+|++++++++.. |++++.++.++++.+.++++|.+.+++....++..    .  .+++|++++++|+  ...+++
T Consensus       148 ~~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~  226 (323)
T cd08241         148 AAGGVGLAAVQLAKAL-GARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLR  226 (323)
T ss_pred             CCchHHHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHH
Confidence            8899999999999995 99999999999999999888887777765433322    1  3579999999985  478899


Q ss_pred             hhccCCEEEEEcCCCCCC-----------ceeEEEe---c--------cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          231 AVKEGGRVVSIIGSVTPP-----------ASSFVLT---S--------DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       231 ~l~~~G~~v~~g~~~~~~-----------~~~~~~~---~--------~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +++++|+++.++......           ...+...   .        ..+.++++++++.++.+++.+++.|++
T Consensus       227 ~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (323)
T cd08241         227 SLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPL  301 (323)
T ss_pred             hhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcH
Confidence            999999999987532111           1111110   0        135678899999999998777776653

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=4.3e-27  Score=207.69  Aligned_cols=268  Identities=34%  Similarity=0.477  Sum_probs=208.7

Q ss_pred             eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (284)
Q Consensus         2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   81 (284)
                      |++.+...+.+ ..+.+. +.+.|+|.+++++|++.++++|++|.....|.++. ....|..+|||++|+|+.+|+++.+
T Consensus         1 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~~   77 (337)
T cd08275           1 RAVVLTGFGGL-DKLKVE-KEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS-APKPPFVPGFECAGTVEAVGEGVKD   77 (337)
T ss_pred             CeEEEcCCCCc-cceEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCcceeEEEEEEECCCCcC
Confidence            56777776664 457887 66777889999999999999999999988776532 1244678999999999999999999


Q ss_pred             CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 023273           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA  160 (284)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~  160 (284)
                      +++||+|++...         +|+|++|+.++.+.++++|+++++.+++.+++++.++|+++ +..+++++++|+|+|++
T Consensus        78 ~~~G~~V~~~~~---------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~  148 (337)
T cd08275          78 FKVGDRVMGLTR---------FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAA  148 (337)
T ss_pred             CCCCCEEEEecC---------CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCc
Confidence            999999999752         58999999999999999999999999998999999999998 56889999999999988


Q ss_pred             chHHHHHHHHHHHhcCCeEEEEe-CChhhHHHHHHcCCcEEeeCCCccccc-----CCCcccEEEeCCCC--cHHHHHhh
Q 023273          161 GGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--CDKALKAV  232 (284)
Q Consensus       161 g~~G~~a~~~a~~~~g~~vi~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g~--~~~~~~~l  232 (284)
                      |.+|++++++|+.+ . .+.++. .++++.+.++++|.+.+++.....+..     ..+++|+++|++|+  ...+++++
T Consensus       149 g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l  226 (337)
T cd08275         149 GGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLL  226 (337)
T ss_pred             chHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHHHHHHHHHhh
Confidence            99999999999984 2 223332 245577888888887777765433211     24579999999985  47889999


Q ss_pred             ccCCEEEEEcCCCCC---------------------------CceeEE---Ee---c----cHHHHHHHHHHHHCCCeeE
Q 023273          233 KEGGRVVSIIGSVTP---------------------------PASSFV---LT---S----DGSILEKLNPYFESGKVKA  275 (284)
Q Consensus       233 ~~~G~~v~~g~~~~~---------------------------~~~~~~---~~---~----~~~~~~~~~~~~~~g~i~~  275 (284)
                      +++|+++.+|.....                           .+..+.   +.   .    ....+.++++++.++.+++
T Consensus       227 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (337)
T cd08275         227 KPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP  306 (337)
T ss_pred             ccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC
Confidence            999999999765311                           011110   00   0    1235778889999999888


Q ss_pred             eecccccC
Q 023273          276 IIDPKGLL  283 (284)
Q Consensus       276 ~i~~~~~~  283 (284)
                      .++++|++
T Consensus       307 ~~~~~~~~  314 (337)
T cd08275         307 KIDSVFPF  314 (337)
T ss_pred             ceeeEEcH
Confidence            77777664

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=4.1e-27  Score=201.36  Aligned_cols=212  Identities=40%  Similarity=0.566  Sum_probs=177.7

Q ss_pred             eEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEecCc--------------cc
Q 023273           31 QVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINE--------------KA   96 (284)
Q Consensus        31 ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~--------------~~   96 (284)
                      ||+|++.++++|++|...+.|.++ ....+|.++|||++|+|+++|++++.|++||+|++....              ..
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~   79 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYP-PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGG   79 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCC-cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCC
Confidence            689999999999999999888653 223457889999999999999999999999999987521              11


Q ss_pred             cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHhc
Q 023273           97 LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVF  175 (284)
Q Consensus        97 ~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~-~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~  175 (284)
                      ..+....|+|++|+.++.+.++++|+++++++++.++.++.|||+++.. ..+.++++|+|+|+++ +|++++++++.. 
T Consensus        80 ~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~-  157 (271)
T cd05188          80 ILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAA-  157 (271)
T ss_pred             EeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHc-
Confidence            1222346899999999999999999999999999999999999999954 5558999999999766 999999999995 


Q ss_pred             CCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-----CCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCC
Q 023273          176 GASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       176 g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (284)
                      |.+++++++++++.+.+++++.+.++++.......     ..+++|++|++++.   ...++++|+++|+++.++...
T Consensus       158 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~  235 (271)
T cd05188         158 GARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS  235 (271)
T ss_pred             CCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence            89999999999999999999888877765443322     14679999999986   378899999999999998654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.96  E-value=9.3e-27  Score=200.60  Aligned_cols=239  Identities=33%  Similarity=0.427  Sum_probs=196.5

Q ss_pred             CeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeE
Q 023273           30 DQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEY  109 (284)
Q Consensus        30 ~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~  109 (284)
                      +|++|++.++++|++|++...|.++    ..|.++|||++|+|+++|+++..+++||+|++..          .|+|++|
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~~----~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~----------~g~~~~~   66 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLLP----GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA----------PGAFATH   66 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCCC----CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe----------cCcccce
Confidence            5899999999999999998877542    3467899999999999999999999999999864          5899999


Q ss_pred             EeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          110 TAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       110 ~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      +.++.+.++++|++++..+++.+++++.++|.++ +..++++|++|+|+|++|.+|++++++++.+ |+++++++.++++
T Consensus        67 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~-g~~v~~~~~~~~~  145 (293)
T cd05195          67 VRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHL-GAEVFATVGSEEK  145 (293)
T ss_pred             EEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHc-CCEEEEEeCCHHH
Confidence            9999999999999999999999999999999998 5688999999999998999999999999995 9999999999999


Q ss_pred             HHHHHHcC--CcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCCC--Cc-------
Q 023273          189 LDLLRSLG--ADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP--PA-------  249 (284)
Q Consensus       189 ~~~~~~~g--~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~~--~~-------  249 (284)
                      .+.+++++  .+.+++.....+..    .  .+++|++++++|+  ...++++++++|+++.++.....  ..       
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~  225 (293)
T cd05195         146 REFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRPFL  225 (293)
T ss_pred             HHHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhhhc
Confidence            99998887  56677765433221    1  4579999999986  58899999999999998765321  01       


Q ss_pred             --eeEEEe-----------ccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          250 --SSFVLT-----------SDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       250 --~~~~~~-----------~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                        ..+...           ...+.+++++++++++++++.+++.+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (293)
T cd05195         226 RNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPS  272 (293)
T ss_pred             cCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeech
Confidence              111110           0134678899999999998877766654

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.95  E-value=5.5e-26  Score=195.62  Aligned_cols=234  Identities=33%  Similarity=0.462  Sum_probs=190.9

Q ss_pred             EEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEeee
Q 023273           34 IKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVE  113 (284)
Q Consensus        34 V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~  113 (284)
                      |++.++++|++|.+...|.++     .|.++|||++|+|+.+|++++.|++||+|++..          .|+|++|+.++
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~-----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------~g~~~~~~~~~   66 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP-----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------PGSFATYVRTD   66 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC-----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc----------CCceeeEEEcc
Confidence            789999999999999887642     357899999999999999999999999999875          48999999999


Q ss_pred             cCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          114 ENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       114 ~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+.++++|+++++.+++.+++++.++|+++ +...+.+|++|+|+|++|.+|++++++++.. |++++++++++++.+.+
T Consensus        67 ~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~  145 (288)
T smart00829       67 ARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHL-GAEVFATAGSPEKRDFL  145 (288)
T ss_pred             HHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            999999999999999999999999999998 6788999999999999999999999999995 99999999999999999


Q ss_pred             HHcCC--cEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCC--CC---------cee
Q 023273          193 RSLGA--DLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT--PP---------ASS  251 (284)
Q Consensus       193 ~~~g~--~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~--~~---------~~~  251 (284)
                      +++|.  +.++++....+.+    .  .+++|+++|++|+  ...++++++++|+++.+|....  ..         ...
T Consensus       146 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~  225 (288)
T smart00829      146 RELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAPFRRNVS  225 (288)
T ss_pred             HHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhhhcCCce
Confidence            99987  6677665433222    1  3479999999885  4778999999999999875431  11         111


Q ss_pred             EEEec----------cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          252 FVLTS----------DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       252 ~~~~~----------~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +....          ..+.+.+++++++++.+++...+.|++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (288)
T smart00829      226 YHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPI  267 (288)
T ss_pred             EEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcH
Confidence            11100          124577888899999887765566653

Enoylreductase in Polyketide synthases.

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.93  E-value=2.1e-24  Score=185.99  Aligned_cols=210  Identities=32%  Similarity=0.395  Sum_probs=171.3

Q ss_pred             CCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchH
Q 023273           57 DSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT  136 (284)
Q Consensus        57 ~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~  136 (284)
                      +.++|.++|||++|+|+++|++++++++||+|++.            +.|++|+.++.+.++++|++++..+++.+ +++
T Consensus        17 ~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~------------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~   83 (277)
T cd08255          17 KLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF------------GPHAERVVVPANLLVPLPDGLPPERAALT-ALA   83 (277)
T ss_pred             cCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec------------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHH
Confidence            45678999999999999999999999999999985            35899999999999999999998888888 788


Q ss_pred             HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcC-CcEEeeCCCcccccCCCc
Q 023273          137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLG-ADLAIDYTKENIEDLPEK  214 (284)
Q Consensus       137 ~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~  214 (284)
                      .|||+++...++.++++++|+| +|.+|++++++|+.+ |.+ ++++++++++.+.++++| .+.+++.....  ...++
T Consensus        84 ~ta~~~~~~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~-g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~  159 (277)
T cd08255          84 ATALNGVRDAEPRLGERVAVVG-LGLVGLLAAQLAKAA-GAREVVGVDPDAARRELAEALGPADPVAADTADE--IGGRG  159 (277)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEECCCHHHHHHHHHcCCCccccccchhh--hcCCC
Confidence            9999998888999999999997 799999999999996 888 999999999999889998 55555433211  12457


Q ss_pred             ccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCC----------CceeEEE---ec-----------cHHHHHHHHHH
Q 023273          215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP----------PASSFVL---TS-----------DGSILEKLNPY  267 (284)
Q Consensus       215 ~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~---~~-----------~~~~~~~~~~~  267 (284)
                      +|++||+++.   ...++++++++|+++.+|.....          ....+..   ..           ..+.+++++++
T Consensus       160 ~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  239 (277)
T cd08255         160 ADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDL  239 (277)
T ss_pred             CCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHH
Confidence            9999999874   47889999999999999865321          0111111   00           12578999999


Q ss_pred             HHCCCeeEeecccccC
Q 023273          268 FESGKVKAIIDPKGLL  283 (284)
Q Consensus       268 ~~~g~i~~~i~~~~~~  283 (284)
                      +++|.+++.+.++||+
T Consensus       240 ~~~~~l~~~~~~~~~~  255 (277)
T cd08255         240 LAEGRLEALITHRVPF  255 (277)
T ss_pred             HHcCCccccccCccCH
Confidence            9999998888888774

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.91  E-value=6e-22  Score=164.55  Aligned_cols=236  Identities=28%  Similarity=0.371  Sum_probs=181.2

Q ss_pred             CCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccc----cceeEEEEEeCCCCCCCCCCCEEEEecCccccCCC
Q 023273           25 PSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPG----YDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHP  100 (284)
Q Consensus        25 ~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G----~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~  100 (284)
                      .++++++++|+.+|.+..|.....+....+.. --.|..+|    ..++|+|++  |+.++|++||.|.+..        
T Consensus        33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~-y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~--------  101 (343)
T KOG1196|consen   33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSD-YAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV--------  101 (343)
T ss_pred             CCCCCccEEeEeeeecCCHHHHhhccCCCccc-ccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec--------
Confidence            45689999999999999998776654432221 11222333    367899988  6778999999998864        


Q ss_pred             CCCCceeeEEeeecC--ceeeCCC--CCCHHhhh-cccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHh
Q 023273          101 KRNGSLAEYTAVEEN--LLALKPK--NLSFVEAA-SLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHV  174 (284)
Q Consensus       101 ~~~g~~~~~~~~~~~--~~~~ip~--~~~~~~aa-~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~  174 (284)
                          +|.+|.+++..  ..++++.  +.++.... .+.++.+|||-.+ +...++.|++|+|.||+|.+|..+.|+|+.+
T Consensus       102 ----gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~  177 (343)
T KOG1196|consen  102 ----GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLM  177 (343)
T ss_pred             ----cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhc
Confidence                69999999764  3345443  45554444 4588899999998 6899999999999999999999999999997


Q ss_pred             cCCeEEEEeCChhhHHHHH-HcCCcEEeeCCCc-ccccC-----CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCC
Q 023273          175 FGASKVAATSSTAKLDLLR-SLGADLAIDYTKE-NIEDL-----PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       175 ~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~-----~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~  245 (284)
                       ||+|+....++||...++ ++|.+..+|+..+ +..+.     ++|+|+.||++|+  +++.+..|+..||+++||.-+
T Consensus       178 -Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~IS  256 (343)
T KOG1196|consen  178 -GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMIS  256 (343)
T ss_pred             -CCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeeh
Confidence             999999999999999996 6789999999876 33332     7899999999997  689999999999999998643


Q ss_pred             -----CCCc---eeE-----------EE----eccHHHHHHHHHHHHCCCeeEe
Q 023273          246 -----TPPA---SSF-----------VL----TSDGSILEKLNPYFESGKVKAI  276 (284)
Q Consensus       246 -----~~~~---~~~-----------~~----~~~~~~~~~~~~~~~~g~i~~~  276 (284)
                           .+..   +..           ..    ....+.++++.+++++|+|+..
T Consensus       257 qYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~  310 (343)
T KOG1196|consen  257 QYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYV  310 (343)
T ss_pred             hccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEe
Confidence                 1111   110           00    0125678999999999999764

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.88  E-value=2.6e-22  Score=189.78  Aligned_cols=248  Identities=22%  Similarity=0.288  Sum_probs=195.5

Q ss_pred             cceEEeccccCC---CCCCCeEEEEEeEeecCHHHHHHHcCCCCC-----CCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023273           14 SVLKFETNVEVP---SLREDQVLIKVVAAALNPIDFKRMLGAFSA-----TDSPLPTIPGYDVAGVVEKVGSQVKKFKVG   85 (284)
Q Consensus        14 ~~~~~~~~~~~~---~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-----~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   85 (284)
                      +.++|. +.|..   +..++.=+-.|.|+.+|..|+....|+++.     ......+++|-|++|+-.          -|
T Consensus      1427 sSlrWi-es~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd~----------~G 1495 (2376)
T KOG1202|consen 1427 SSLRWI-ESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRDA----------SG 1495 (2376)
T ss_pred             cceeee-ecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccccC----------CC
Confidence            445665 44533   335666678899999999999999998643     344566899999988654          49


Q ss_pred             CEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHH
Q 023273           86 DEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVG  164 (284)
Q Consensus        86 d~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G  164 (284)
                      .||++..+         .-+.++.+..+.+.+|.+|.+..+++|+.+|+.+.|+|+++ .++..++|+++||++++|++|
T Consensus      1496 rRvM~mvp---------AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVG 1566 (2376)
T KOG1202|consen 1496 RRVMGMVP---------AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVG 1566 (2376)
T ss_pred             cEEEEeee---------hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchh
Confidence            99999875         56788899999999999999999999999999999999999 679999999999999999999


Q ss_pred             HHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcEEeeCCCccccc------CCCcccEEEeCCCC--cHHHHHhh
Q 023273          165 TMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAV  232 (284)
Q Consensus       165 ~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~------~~~~~d~vid~~g~--~~~~~~~l  232 (284)
                      .+|+.+|.++ |++|+.++.+.||++++..    +..+++-|+++.+++.      .++|+|+|++....  +++.++||
T Consensus      1567 QAAIaiALa~-G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCL 1645 (2376)
T KOG1202|consen 1567 QAAIAIALAH-GCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCL 1645 (2376)
T ss_pred             HHHHHHHHHc-CCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHH
Confidence            9999999996 9999999999999998853    3345566666655544      27799999998875  68999999


Q ss_pred             ccCCEEEEEcCCCCCC-----------ceeEE-------EeccHHHHHHHHHHH----HCCCeeEeeccccc
Q 023273          233 KEGGRVVSIIGSVTPP-----------ASSFV-------LTSDGSILEKLNPYF----ESGKVKAIIDPKGL  282 (284)
Q Consensus       233 ~~~G~~v~~g~~~~~~-----------~~~~~-------~~~~~~~~~~~~~~~----~~g~i~~~i~~~~~  282 (284)
                      +.+|||..+|-....+           +.+|+       +...-+++.++.+++    ++|..+|..+++|+
T Consensus      1646 a~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~ 1717 (2376)
T KOG1202|consen 1646 ALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFH 1717 (2376)
T ss_pred             HhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceecccccccc
Confidence            9999999998764222           22222       122345566666655    45678888887775

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.75  E-value=8.7e-18  Score=124.45  Aligned_cols=91  Identities=33%  Similarity=0.395  Sum_probs=73.8

Q ss_pred             CCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEecC---------------
Q 023273           29 EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN---------------   93 (284)
Q Consensus        29 ~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~---------------   93 (284)
                      ||||+|||++++||++|++.+.|. .......|.++|||++|+|+++|+++++|++||+|+..+.               
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~-~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~   79 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGG-PPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPN   79 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTS-SSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhc-cccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccc
Confidence            689999999999999999999984 2234578999999999999999999999999999988542               


Q ss_pred             ---ccccCCCCCCCceeeEEeeecCceeeC
Q 023273           94 ---EKALDHPKRNGSLAEYTAVEENLLALK  120 (284)
Q Consensus        94 ---~~~~~~~~~~g~~~~~~~~~~~~~~~i  120 (284)
                         .....+...+|+|++|+++|++.++++
T Consensus        80 ~c~~~~~~g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   80 LCPNPEVLGLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             GTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred             cCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence               111234557899999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.44  E-value=1e-12  Score=100.18  Aligned_cols=108  Identities=33%  Similarity=0.473  Sum_probs=87.4

Q ss_pred             hHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC---cHHHHHhh
Q 023273          162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ---CDKALKAV  232 (284)
Q Consensus       162 ~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~---~~~~~~~l  232 (284)
                      ++|++++++|+.+ |++|++++++++|++.++++|++++++++..++.+.      .+++|++|||+|+   .+.+++++
T Consensus         1 ~vG~~a~q~ak~~-G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l   79 (130)
T PF00107_consen    1 GVGLMAIQLAKAM-GAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL   79 (130)
T ss_dssp             HHHHHHHHHHHHT-TSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred             ChHHHHHHHHHHc-CCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence            5899999999996 899999999999999999999999999987654332      2479999999995   58999999


Q ss_pred             ccCCEEEEEcCCC-CCCcee------------EEEeccHHHHHHHHHHHHC
Q 023273          233 KEGGRVVSIIGSV-TPPASS------------FVLTSDGSILEKLNPYFES  270 (284)
Q Consensus       233 ~~~G~~v~~g~~~-~~~~~~------------~~~~~~~~~~~~~~~~~~~  270 (284)
                      +++|+++++|.+. .+..++            .+....+++++++++++++
T Consensus        80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~  130 (130)
T PF00107_consen   80 RPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ  130 (130)
T ss_dssp             EEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred             ccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence            9999999999887 222221            1223356899999998863

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=98.97  E-value=6.6e-09  Score=95.76  Aligned_cols=95  Identities=21%  Similarity=0.360  Sum_probs=78.2

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCCcc-------------c-----
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKEN-------------I-----  208 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~-------------~-----  208 (284)
                      ..++++|+|+| +|++|+++++.|+.+ |++|++++.+++++++++++|++.+ +|..++.             +     
T Consensus       162 ~~pg~kVlViG-aG~iGL~Ai~~Ak~l-GA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        162 KVPPAKVLVIG-AGVAGLAAIGAAGSL-GAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CcCCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            46899999999 899999999999996 8899999999999999999998844 5543211             0     


Q ss_pred             ---ccCCCcccEEEeCCCC---------cHHHHHhhccCCEEEEEcCC
Q 023273          209 ---EDLPEKFDVVFDAVGQ---------CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       209 ---~~~~~~~d~vid~~g~---------~~~~~~~l~~~G~~v~~g~~  244 (284)
                         .+..+++|++|+|+|.         .+++++.++++|+++.++..
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~  287 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAE  287 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccC
Confidence               0112579999999984         27899999999999999864

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=98.92  E-value=1e-08  Score=92.30  Aligned_cols=125  Identities=17%  Similarity=0.151  Sum_probs=93.0

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc--
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC--  225 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~--  225 (284)
                      ..+|++|+|+| .|++|+.+++.++.+ |++|++++.++.|...++.+|++.+ +.     .+..+++|+||+|+|+.  
T Consensus       199 ~l~GktVvViG-~G~IG~~va~~ak~~-Ga~ViV~d~d~~R~~~A~~~G~~~~-~~-----~e~v~~aDVVI~atG~~~~  270 (413)
T cd00401         199 MIAGKVAVVAG-YGDVGKGCAQSLRGQ-GARVIVTEVDPICALQAAMEGYEVM-TM-----EEAVKEGDIFVTTTGNKDI  270 (413)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEECChhhHHHHHhcCCEEc-cH-----HHHHcCCCEEEECCCCHHH
Confidence            46899999999 899999999999995 9999999999999999999997533 21     12235789999999963  


Q ss_pred             -HH-HHHhhccCCEEEEEcCCCCCCce--------eE--EEeccHH-HHH--HHHHHHHCCCe---eEeeccc
Q 023273          226 -DK-ALKAVKEGGRVVSIIGSVTPPAS--------SF--VLTSDGS-ILE--KLNPYFESGKV---KAIIDPK  280 (284)
Q Consensus       226 -~~-~~~~l~~~G~~v~~g~~~~~~~~--------~~--~~~~~~~-~~~--~~~~~~~~g~i---~~~i~~~  280 (284)
                       .. .+++++++|+++.+|....+.+.        ..  +.....+ .++  ..+.++++|++   .+.++|.
T Consensus       271 i~~~~l~~mk~GgilvnvG~~~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~~gH~  343 (413)
T cd00401         271 ITGEHFEQMKDGAIVCNIGHFDVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCATGHP  343 (413)
T ss_pred             HHHHHHhcCCCCcEEEEeCCCCCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCcccCCCc
Confidence             44 48999999999999865321111        11  1111112 445  68999999988   6668777

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=98.63  E-value=1.2e-08  Score=77.34  Aligned_cols=87  Identities=38%  Similarity=0.507  Sum_probs=58.2

Q ss_pred             cCCcEEeeCCCcccccCCCcccEEEeCCC--C--c-HHHHHhhccCCEEEEEcCCC-------CCCceeEEEe----c--
Q 023273          195 LGADLAIDYTKENIEDLPEKFDVVFDAVG--Q--C-DKALKAVKEGGRVVSIIGSV-------TPPASSFVLT----S--  256 (284)
Q Consensus       195 ~g~~~~~~~~~~~~~~~~~~~d~vid~~g--~--~-~~~~~~l~~~G~~v~~g~~~-------~~~~~~~~~~----~--  256 (284)
                      +|+++++|++..++ ...+++|+|||++|  .  . ..++++| ++|+++.++...       ....+...+.    .  
T Consensus         1 LGAd~vidy~~~~~-~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
T PF13602_consen    1 LGADEVIDYRDTDF-AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGDLPSFARRLKGRSIRYSFLFSVDPNA   78 (127)
T ss_dssp             CT-SEEEETTCSHH-HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SHHHHHHHHHHCHHCEEECCC-H--HH
T ss_pred             CCcCEEecCCCccc-cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCcccchhhhhcccceEEEEEEecCCCc
Confidence            58899999987666 44689999999999  3  2 5667788 999999998510       1112222211    1  


Q ss_pred             -cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          257 -DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       257 -~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                       ..++++++.+++++|+|+|.|+++|||
T Consensus        79 ~~~~~l~~l~~l~~~G~l~~~i~~~f~l  106 (127)
T PF13602_consen   79 IRAEALEELAELVAEGKLKPPIDRVFPL  106 (127)
T ss_dssp             HHHHHHHHHHHHHHTTSS---EEEEEEG
T ss_pred             hHHHHHHHHHHHHHCCCeEEeeccEECH
Confidence             345699999999999999999999997

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.29  E-value=5.7e-06  Score=76.37  Aligned_cols=93  Identities=23%  Similarity=0.436  Sum_probs=73.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCCc-------------c-------
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKE-------------N-------  207 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~-------------~-------  207 (284)
                      .++++++|+| +|.+|+++++.++.+ |++|++++.++++++.++++|.+.+ ++..++             +       
T Consensus       162 vp~akVlViG-aG~iGl~Aa~~ak~l-GA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~  239 (511)
T TIGR00561       162 VPPAKVLVIG-AGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME  239 (511)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence            4679999999 899999999999996 9999999999999999999997652 232110             0       


Q ss_pred             -cccCCCcccEEEeCC---CC--c----HHHHHhhccCCEEEEEcC
Q 023273          208 -IEDLPEKFDVVFDAV---GQ--C----DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       208 -~~~~~~~~d~vid~~---g~--~----~~~~~~l~~~G~~v~~g~  243 (284)
                       +.+..+++|++|+|+   |.  +    +.+++.|++++.+|.++.
T Consensus       240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~  285 (511)
T TIGR00561       240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAA  285 (511)
T ss_pred             HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeee
Confidence             111245799999998   53  2    788999999999999854

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.16  E-value=1.9e-05  Score=71.59  Aligned_cols=99  Identities=23%  Similarity=0.290  Sum_probs=75.9

Q ss_pred             HHHHHHhc-ccC-CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCccc
Q 023273          139 AYEGLERS-AFS-AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFD  216 (284)
Q Consensus       139 a~~al~~~-~~~-~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d  216 (284)
                      .|.++... ++. .|++|+|+| .|.+|..+++.++.+ |.+|++++.++.+...+...|.. +.+     +.+..+++|
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG-~G~IG~~vA~~lr~~-Ga~ViV~d~dp~ra~~A~~~G~~-v~~-----l~eal~~aD  269 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAG-YGDVGKGCAQRLRGL-GARVIVTEVDPICALQAAMDGFR-VMT-----MEEAAELGD  269 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEcCCchhhHHHHhcCCE-ecC-----HHHHHhCCC
Confidence            45555433 444 899999999 899999999999996 99999999998887777666654 222     222345799


Q ss_pred             EEEeCCCCc----HHHHHhhccCCEEEEEcCCC
Q 023273          217 VVFDAVGQC----DKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       217 ~vid~~g~~----~~~~~~l~~~G~~v~~g~~~  245 (284)
                      ++|+++|+.    ...++.|++++.++..|...
T Consensus       270 VVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        270 IFVTATGNKDVITAEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             EEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence            999999863    36788999999999887654

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.10  E-value=2.3e-05  Score=66.55  Aligned_cols=144  Identities=18%  Similarity=0.221  Sum_probs=88.0

Q ss_pred             CCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcC
Q 023273           80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG  159 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga  159 (284)
                      ..+++|++++..+            +|.+|.. +...++.+++++.+..+. .+.+. .....+. ....++++|+.+| 
T Consensus        65 ~p~~~g~~~~i~p------------~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~-~~l~~l~-~~~~~~~~VLDiG-  127 (250)
T PRK00517         65 HPIRIGDRLWIVP------------SWEDPPD-PDEINIELDPGMAFGTGT-HPTTR-LCLEALE-KLVLPGKTVLDVG-  127 (250)
T ss_pred             CCEEEcCCEEEEC------------CCcCCCC-CCeEEEEECCCCccCCCC-CHHHH-HHHHHHH-hhcCCCCEEEEeC-
Confidence            4477888877654            3555544 666788898888765432 22111 1122222 2256899999999 


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC------cHHHHHhhc
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ------CDKALKAVK  233 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~------~~~~~~~l~  233 (284)
                      +|. |..++.+++. +..++++++.++...+.+++.....-+. ..-.+......+|+|+.+...      .+.+.+.|+
T Consensus       128 cGs-G~l~i~~~~~-g~~~v~giDis~~~l~~A~~n~~~~~~~-~~~~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lk  204 (250)
T PRK00517        128 CGS-GILAIAAAKL-GAKKVLAVDIDPQAVEAARENAELNGVE-LNVYLPQGDLKADVIVANILANPLLELAPDLARLLK  204 (250)
T ss_pred             CcH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHcCCC-ceEEEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcC
Confidence            665 8888776664 3446999999999888776532111010 000011111159999876542      267888999


Q ss_pred             cCCEEEEEcC
Q 023273          234 EGGRVVSIIG  243 (284)
Q Consensus       234 ~~G~~v~~g~  243 (284)
                      ++|++++.+.
T Consensus       205 pgG~lilsgi  214 (250)
T PRK00517        205 PGGRLILSGI  214 (250)
T ss_pred             CCcEEEEEEC
Confidence            9999997653

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.07  E-value=9.2e-05  Score=64.43  Aligned_cols=91  Identities=19%  Similarity=0.372  Sum_probs=72.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---cH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CD  226 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---~~  226 (284)
                      .+.+++|+| .|.+|+.++..++.+ |++|++.++++++.+.++++|...+ ..  ..+.+.-.++|+||+|++.   ..
T Consensus       151 ~g~kvlViG-~G~iG~~~a~~L~~~-Ga~V~v~~r~~~~~~~~~~~G~~~~-~~--~~l~~~l~~aDiVI~t~p~~~i~~  225 (296)
T PRK08306        151 HGSNVLVLG-FGRTGMTLARTLKAL-GANVTVGARKSAHLARITEMGLSPF-HL--SELAEEVGKIDIIFNTIPALVLTK  225 (296)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCeee-cH--HHHHHHhCCCCEEEECCChhhhhH
Confidence            689999999 799999999999995 8999999999988888888886532 21  1223334679999999874   26


Q ss_pred             HHHHhhccCCEEEEEcCCC
Q 023273          227 KALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       227 ~~~~~l~~~G~~v~~g~~~  245 (284)
                      ..++.+++++.++.++...
T Consensus       226 ~~l~~~~~g~vIIDla~~p  244 (296)
T PRK08306        226 EVLSKMPPEALIIDLASKP  244 (296)
T ss_pred             HHHHcCCCCcEEEEEccCC
Confidence            7788899999999886554

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=98.00  E-value=0.00011  Score=59.65  Aligned_cols=99  Identities=22%  Similarity=0.309  Sum_probs=72.8

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcEEeeCCCccccc-C-CCcc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLAIDYTKENIED-L-PEKF  215 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~-~-~~~~  215 (284)
                      +++...++++++||-+|  ++.|+.++.+|+.. + +|+.+++.++-.+.+    +.+|..++.-...+-..- . ...|
T Consensus        64 m~~~L~~~~g~~VLEIG--tGsGY~aAvla~l~-~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~aPy  139 (209)
T COG2518          64 MLQLLELKPGDRVLEIG--TGSGYQAAVLARLV-G-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEEAPY  139 (209)
T ss_pred             HHHHhCCCCCCeEEEEC--CCchHHHHHHHHHh-C-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCCCCc
Confidence            55788999999999999  47799999999984 5 999999988755555    457764432222221111 1 3579


Q ss_pred             cEEEeCCCC---cHHHHHhhccCCEEEEEcCC
Q 023273          216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       216 d~vid~~g~---~~~~~~~l~~~G~~v~~g~~  244 (284)
                      |.|+-+.+.   ++..++.|+++|+++..-+.
T Consensus       140 D~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG~  171 (209)
T COG2518         140 DRIIVTAAAPEVPEALLDQLKPGGRLVIPVGS  171 (209)
T ss_pred             CEEEEeeccCCCCHHHHHhcccCCEEEEEEcc
Confidence            999887763   68999999999999987553

>TIGR00936 ahcY adenosylhomocysteinase

Probab=97.97  E-value=7.7e-05  Score=67.25  Aligned_cols=90  Identities=21%  Similarity=0.248  Sum_probs=71.6

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc--
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC--  225 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~--  225 (284)
                      ...|++|+|+| .|.+|+.+++.++.+ |++|++++.++.+...++..|.. +.+.     .+.-++.|++|+++|+.  
T Consensus       192 ~l~Gk~VvViG-~G~IG~~vA~~ak~~-Ga~ViV~d~dp~r~~~A~~~G~~-v~~l-----eeal~~aDVVItaTG~~~v  263 (406)
T TIGR00936       192 LIAGKTVVVAG-YGWCGKGIAMRARGM-GARVIVTEVDPIRALEAAMDGFR-VMTM-----EEAAKIGDIFITATGNKDV  263 (406)
T ss_pred             CCCcCEEEEEC-CCHHHHHHHHHHhhC-cCEEEEEeCChhhHHHHHhcCCE-eCCH-----HHHHhcCCEEEECCCCHHH
Confidence            46899999999 999999999999995 99999999988887777777763 2221     12235689999999863  


Q ss_pred             --HHHHHhhccCCEEEEEcCCC
Q 023273          226 --DKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       226 --~~~~~~l~~~G~~v~~g~~~  245 (284)
                        ...+..+++++.++.+|...
T Consensus       264 I~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       264 IRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             HHHHHHhcCCCCcEEEEECCCC
Confidence              45888999999999887653

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PLN02494 adenosylhomocysteinase

Probab=97.82  E-value=9.1e-05  Score=67.52  Aligned_cols=88  Identities=20%  Similarity=0.235  Sum_probs=71.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---c
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---C  225 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---~  225 (284)
                      ..|++|+|+| .|.+|..+++.++.+ |++|++++.++.+...+...|... .+     ..+.-+..|++++++|+   .
T Consensus       252 LaGKtVvViG-yG~IGr~vA~~aka~-Ga~VIV~e~dp~r~~eA~~~G~~v-v~-----leEal~~ADVVI~tTGt~~vI  323 (477)
T PLN02494        252 IAGKVAVICG-YGDVGKGCAAAMKAA-GARVIVTEIDPICALQALMEGYQV-LT-----LEDVVSEADIFVTTTGNKDII  323 (477)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhhHHHHhcCCee-cc-----HHHHHhhCCEEEECCCCccch
Confidence            5799999999 899999999999995 999999999888877777777642 21     22223568999999985   2


Q ss_pred             -HHHHHhhccCCEEEEEcCC
Q 023273          226 -DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       226 -~~~~~~l~~~G~~v~~g~~  244 (284)
                       ...++.|++++.++.+|.+
T Consensus       324 ~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        324 MVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             HHHHHhcCCCCCEEEEcCCC
Confidence             7799999999999999875

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=97.78  E-value=0.00022  Score=61.26  Aligned_cols=97  Identities=22%  Similarity=0.275  Sum_probs=66.7

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcC--CeEEEEeCChhhHHHHHHc----CCcEE--eeCCCcccccCCCccc
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSL----GADLA--IDYTKENIEDLPEKFD  216 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~~~~~~~~~~~~----g~~~~--~~~~~~~~~~~~~~~d  216 (284)
                      ...++++++||.+| +|+ |..+..+++.. +  .++++++.+++.++.+++.    +...+  +..+...+....+.+|
T Consensus        72 ~~~~~~g~~VLDiG-~G~-G~~~~~~a~~~-g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD  148 (272)
T PRK11873         72 LAELKPGETVLDLG-SGG-GFDCFLAARRV-GPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVD  148 (272)
T ss_pred             hccCCCCCEEEEeC-CCC-CHHHHHHHHHh-CCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCcee
Confidence            46788999999999 666 88888888764 4  3699999999998888753    32221  1111111111135799


Q ss_pred             EEEeCCC-----C----cHHHHHhhccCCEEEEEcCC
Q 023273          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       217 ~vid~~g-----~----~~~~~~~l~~~G~~v~~g~~  244 (284)
                      +|+.+..     +    ++.+.+.|+++|++++.+..
T Consensus       149 ~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~  185 (272)
T PRK11873        149 VIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVV  185 (272)
T ss_pred             EEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEee
Confidence            9986531     2    37899999999999987543

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.78  E-value=6.7e-05  Score=65.81  Aligned_cols=106  Identities=23%  Similarity=0.251  Sum_probs=73.8

Q ss_pred             CceeeCCCCCCHHhhhcccchHHHHHHHHHhccc----CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH-
Q 023273          115 NLLALKPKNLSFVEAASLPLATETAYEGLERSAF----SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-  189 (284)
Q Consensus       115 ~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~----~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~-  189 (284)
                      ...+++|+.+..+.++... +...++.+++.+..    .++++|+|+| +|.+|..+++.++..++.+++++.+++++. 
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~  216 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERAE  216 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence            3566778888877766652 33456667754332    4799999999 799999999998874346788889988875 


Q ss_pred             HHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc
Q 023273          190 DLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC  225 (284)
Q Consensus       190 ~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~  225 (284)
                      +.++++|.. +++.+  ++.+....+|+||.|++.+
T Consensus       217 ~la~~~g~~-~~~~~--~~~~~l~~aDvVi~at~~~  249 (311)
T cd05213         217 ELAKELGGN-AVPLD--ELLELLNEADVVISATGAP  249 (311)
T ss_pred             HHHHHcCCe-EEeHH--HHHHHHhcCCEEEECCCCC
Confidence            566777763 33321  2233335689999999964

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.74  E-value=0.0012  Score=57.18  Aligned_cols=167  Identities=16%  Similarity=0.111  Sum_probs=103.2

Q ss_pred             EEEEEeCCCCCCCCCCCEEEEecCccc------------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhc
Q 023273           70 GVVEKVGSQVKKFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAAS  131 (284)
Q Consensus        70 G~V~~vG~~~~~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~  131 (284)
                      ++|++  |.++++.+|+||+++.+-..                  .+.....-.|.+|.++..+..+. |  -....-++
T Consensus        39 A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~-~--~~e~~~~L  113 (314)
T PF11017_consen   39 ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD-P--EREDWQML  113 (314)
T ss_pred             EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC-c--chhHHHHH
Confidence            66666  89999999999999874211                  01222334566666665554431 1  11223344


Q ss_pred             ccchHHHHHHHHHh---cccCCCCEEEEEcCCchHHHHHHHHHH-HhcCCeEEEEeCChhhHHHHHHcC-CcEEeeCCCc
Q 023273          132 LPLATETAYEGLER---SAFSAGKSILVLGGAGGVGTMVIQLAK-HVFGASKVAATSSTAKLDLLRSLG-ADLAIDYTKE  206 (284)
Q Consensus       132 ~~~~~~ta~~al~~---~~~~~g~~vlI~ga~g~~G~~a~~~a~-~~~g~~vi~~~~~~~~~~~~~~~g-~~~~~~~~~~  206 (284)
                      +...+.|+|..-+.   .+.-..+.|+|.+|++.+++..+.+++ ...+.+++.+++ +.+..+.+.+| .+.++.|++ 
T Consensus       114 lrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS-~~N~~Fve~lg~Yd~V~~Yd~-  191 (314)
T PF11017_consen  114 LRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTS-ARNVAFVESLGCYDEVLTYDD-  191 (314)
T ss_pred             HHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEec-CcchhhhhccCCceEEeehhh-
Confidence            44466788865432   334556789999999999999999888 323567776665 45556788888 577777753 


Q ss_pred             ccccC-CCcccEEEeCCCCc---HHHHHhhccCC-EEEEEcCC
Q 023273          207 NIEDL-PEKFDVVFDAVGQC---DKALKAVKEGG-RVVSIIGS  244 (284)
Q Consensus       207 ~~~~~-~~~~d~vid~~g~~---~~~~~~l~~~G-~~v~~g~~  244 (284)
                       +..+ ...--+++|++|+.   ..+.+.+...= ..+.+|..
T Consensus       192 -i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~t  233 (314)
T PF11017_consen  192 -IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGAT  233 (314)
T ss_pred             -hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEcc
Confidence             2333 24566789999973   34444444432 45555554

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.61  E-value=0.00044  Score=62.14  Aligned_cols=93  Identities=24%  Similarity=0.412  Sum_probs=67.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeCC-CcccccCCCcccEEEeCC---CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYT-KENIEDLPEKFDVVFDAV---GQ  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~-~~~~~~~~~~~d~vid~~---g~  224 (284)
                      ++.+|+|+| +|.+|+.+++.++.+ |++|+++++++++.+.+.. ++........ .+.+.+....+|++|+++   +.
T Consensus       166 ~~~~VlViG-aG~vG~~aa~~a~~l-Ga~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~  243 (370)
T TIGR00518       166 EPGDVTIIG-GGVVGTNAAKMANGL-GATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA  243 (370)
T ss_pred             CCceEEEEc-CCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence            345699999 799999999999996 8999999999888877754 4442212211 122333346799999997   32


Q ss_pred             ------cHHHHHhhccCCEEEEEcCC
Q 023273          225 ------CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       225 ------~~~~~~~l~~~G~~v~~g~~  244 (284)
                            ...+++.+++++.++.++..
T Consensus       244 ~~p~lit~~~l~~mk~g~vIvDva~d  269 (370)
T TIGR00518       244 KAPKLVSNSLVAQMKPGAVIVDVAID  269 (370)
T ss_pred             CCCcCcCHHHHhcCCCCCEEEEEecC
Confidence                  26788899999999998643

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.50  E-value=0.00031  Score=60.35  Aligned_cols=96  Identities=28%  Similarity=0.462  Sum_probs=59.8

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcEEeeCCCcccccCCCcccEE
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~d~v  218 (284)
                      ++.+++++|++||-+| +| -|..+..+|+.. |++|+.++.+++..+.++    +.|...-+.-...++.+....+|.|
T Consensus        55 ~~~~~l~~G~~vLDiG-cG-wG~~~~~~a~~~-g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~~~~~fD~I  131 (273)
T PF02353_consen   55 CEKLGLKPGDRVLDIG-CG-WGGLAIYAAERY-GCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRDLPGKFDRI  131 (273)
T ss_dssp             HTTTT--TT-EEEEES--T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG---S-SEE
T ss_pred             HHHhCCCCCCEEEEeC-CC-ccHHHHHHHHHc-CcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccccCCCCCEE
Confidence            4678999999999999 45 788888899984 999999999999888775    3442111111112344445689987


Q ss_pred             Ee-----CCCC------cHHHHHhhccCCEEEEE
Q 023273          219 FD-----AVGQ------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       219 id-----~~g~------~~~~~~~l~~~G~~v~~  241 (284)
                      +.     .+|.      +..+.+.|+|+|++++-
T Consensus       132 vSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  132 VSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             EEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             EEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            64     3442      36788999999999754

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.47  E-value=0.00048  Score=52.71  Aligned_cols=93  Identities=24%  Similarity=0.338  Sum_probs=60.4

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHH-HcCCc--EEeeCCCcccccCCCcccEEEeCCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLR-SLGAD--LAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      --.+.+++|+| +|++|.+++..+... |++ ++++.|+.+|.+.+. +++..  .+++.+  ++......+|++|+|++
T Consensus         9 ~l~~~~vlviG-aGg~ar~v~~~L~~~-g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~--~~~~~~~~~DivI~aT~   84 (135)
T PF01488_consen    9 DLKGKRVLVIG-AGGAARAVAAALAAL-GAKEITIVNRTPERAEALAEEFGGVNIEAIPLE--DLEEALQEADIVINATP   84 (135)
T ss_dssp             TGTTSEEEEES-SSHHHHHHHHHHHHT-TSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG--GHCHHHHTESEEEE-SS
T ss_pred             CcCCCEEEEEC-CHHHHHHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHcCccccceeeHH--HHHHHHhhCCeEEEecC
Confidence            34689999999 799999999999886 765 899999988877664 55322  233332  22233467999999987


Q ss_pred             Cc-----HHHHHhhcc-CCEEEEEcCC
Q 023273          224 QC-----DKALKAVKE-GGRVVSIIGS  244 (284)
Q Consensus       224 ~~-----~~~~~~l~~-~G~~v~~g~~  244 (284)
                      ..     ...+....+ -+.++.++.|
T Consensus        85 ~~~~~i~~~~~~~~~~~~~~v~Dla~P  111 (135)
T PF01488_consen   85 SGMPIITEEMLKKASKKLRLVIDLAVP  111 (135)
T ss_dssp             TTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred             CCCcccCHHHHHHHHhhhhceeccccC
Confidence            52     233332222 2577777755

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.45  E-value=0.00074  Score=61.83  Aligned_cols=89  Identities=25%  Similarity=0.279  Sum_probs=70.3

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---  224 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---  224 (284)
                      .-.|++++|+| .|.+|..+++.++.+ |++|+++++++.+...+...|... .     .+.+..+..|+++.++|.   
T Consensus       251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~-Ga~ViV~e~dp~~a~~A~~~G~~~-~-----~leell~~ADIVI~atGt~~i  322 (476)
T PTZ00075        251 MIAGKTVVVCG-YGDVGKGCAQALRGF-GARVVVTEIDPICALQAAMEGYQV-V-----TLEDVVETADIFVTATGNKDI  322 (476)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhHHHHHhcCcee-c-----cHHHHHhcCCEEEECCCcccc
Confidence            45799999999 899999999999994 999999988877765555556432 1     123334679999999885   


Q ss_pred             c-HHHHHhhccCCEEEEEcCC
Q 023273          225 C-DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       225 ~-~~~~~~l~~~G~~v~~g~~  244 (284)
                      . ...+++|++++.++.+|-.
T Consensus       323 I~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        323 ITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             cCHHHHhccCCCcEEEEcCCC
Confidence            2 5899999999999998765

>PRK08324 short chain dehydrogenase; Validated

Probab=97.44  E-value=0.00077  Score=65.57  Aligned_cols=109  Identities=25%  Similarity=0.294  Sum_probs=67.2

Q ss_pred             CceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEe
Q 023273          104 GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT  183 (284)
Q Consensus       104 g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~  183 (284)
                      .++++|..++...++.+ +..+.+++.....         ......+|++++|+|++|++|.++++.+... |.+|++++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~---------~~~~~l~gk~vLVTGasggIG~~la~~L~~~-Ga~Vvl~~  453 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM---------PKPKPLAGKVALVTGAAGGIGKATAKRLAAE-GACVVLAD  453 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhcC---------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHC-cCEEEEEe
Confidence            34556666665555555 4444444431110         0123346899999999999999999998884 89999999


Q ss_pred             CChhhHHHHH-HcCC--c-EE--eeCCCc-cccc-------CCCcccEEEeCCC
Q 023273          184 SSTAKLDLLR-SLGA--D-LA--IDYTKE-NIED-------LPEKFDVVFDAVG  223 (284)
Q Consensus       184 ~~~~~~~~~~-~~g~--~-~~--~~~~~~-~~~~-------~~~~~d~vid~~g  223 (284)
                      +++++.+.+. +++.  . ..  .|-.+. ....       ..+++|++|+++|
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG  507 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG  507 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            9888766553 3332  1 11  122211 1111       1347999999998

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.42  E-value=0.00021  Score=67.97  Aligned_cols=76  Identities=26%  Similarity=0.463  Sum_probs=57.3

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC---------------------hhhHHHHHHcCCcEEeeCCC
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS---------------------TAKLDLLRSLGADLAIDYTK  205 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~---------------------~~~~~~~~~~g~~~~~~~~~  205 (284)
                      ...+|++|+|+| +|+.|++++..++.. |.+|++++..                     +++++.++++|.+..++...
T Consensus       133 ~~~~g~~V~VIG-aGpaGL~aA~~l~~~-G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~  210 (564)
T PRK12771        133 APDTGKRVAVIG-GGPAGLSAAYHLRRM-GHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV  210 (564)
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence            467899999999 899999999999985 9999998842                     34567778889776665432


Q ss_pred             -cc--cccCCCcccEEEeCCCC
Q 023273          206 -EN--IEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       206 -~~--~~~~~~~~d~vid~~g~  224 (284)
                       .+  ......++|++|+++|+
T Consensus       211 ~~~~~~~~~~~~~D~Vi~AtG~  232 (564)
T PRK12771        211 GEDITLEQLEGEFDAVFVAIGA  232 (564)
T ss_pred             CCcCCHHHHHhhCCEEEEeeCC
Confidence             11  22234579999999985

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.41  E-value=0.00074  Score=57.32  Aligned_cols=75  Identities=24%  Similarity=0.346  Sum_probs=53.1

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcC----C-cEEeeCC--C-cccccC-------
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLG----A-DLAIDYT--K-ENIEDL-------  211 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g----~-~~~~~~~--~-~~~~~~-------  211 (284)
                      ...+.+++|+||++++|...+..... .|.+++.+.|+.+|++.+. ++.    . .+++..+  + +.....       
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~-~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLAR-RGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence            45678999999999999997777776 4999999999999987774 332    1 1233222  1 111111       


Q ss_pred             CCcccEEEeCCC
Q 023273          212 PEKFDVVFDAVG  223 (284)
Q Consensus       212 ~~~~d~vid~~g  223 (284)
                      ...+|+.++++|
T Consensus        82 ~~~IdvLVNNAG   93 (265)
T COG0300          82 GGPIDVLVNNAG   93 (265)
T ss_pred             CCcccEEEECCC
Confidence            247999999988

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=97.38  E-value=0.0012  Score=48.24  Aligned_cols=90  Identities=31%  Similarity=0.406  Sum_probs=62.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CC-c--EEeeCCCcccccCCCcccEEEeCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA-D--LAIDYTKENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~-~--~~~~~~~~~~~~~~~~~d~vid~~  222 (284)
                      |+.+||-+|+  +.|..++.+++...+.+++.++.+++..+.+++.    +. .  .++..+........+.||+|+...
T Consensus         1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~   78 (112)
T PF12847_consen    1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSG   78 (112)
T ss_dssp             TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECS
T ss_pred             CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECC
Confidence            6889999983  5588888888843589999999999988888642    21 1  122222211233356799998876


Q ss_pred             -C-C-----------cHHHHHhhccCCEEEEE
Q 023273          223 -G-Q-----------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       223 -g-~-----------~~~~~~~l~~~G~~v~~  241 (284)
                       . .           ++.+.+.|+++|++++-
T Consensus        79 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   79 FTLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             GSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence             2 1           25688899999999863

...

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.38  E-value=0.0026  Score=55.20  Aligned_cols=92  Identities=17%  Similarity=0.109  Sum_probs=61.3

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CCc-EEeeCCCcccccCCCcccEEEeCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD-LAIDYTKENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~d~vid~~  222 (284)
                      ..++++|+-+| +|. |..++.+++. +..++++++.++...+.+++.    +.. .+.....+......+.+|+|+.+.
T Consensus       157 ~~~g~~VLDvG-cGs-G~lai~aa~~-g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~~~~~~~~~fDlVvan~  233 (288)
T TIGR00406       157 DLKDKNVIDVG-CGS-GILSIAALKL-GAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIYLEQPIEGKADVIVANI  233 (288)
T ss_pred             cCCCCEEEEeC-CCh-hHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecccccccCCCceEEEEec
Confidence            45789999999 666 8888777765 456899999999887777542    211 111111111112245799998765


Q ss_pred             C-C-----cHHHHHhhccCCEEEEEc
Q 023273          223 G-Q-----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       223 g-~-----~~~~~~~l~~~G~~v~~g  242 (284)
                      . .     ...+.++|+++|++++.|
T Consensus       234 ~~~~l~~ll~~~~~~LkpgG~li~sg  259 (288)
T TIGR00406       234 LAEVIKELYPQFSRLVKPGGWLILSG  259 (288)
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence            3 2     266789999999998765

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.37  E-value=0.0019  Score=55.20  Aligned_cols=98  Identities=26%  Similarity=0.424  Sum_probs=71.9

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcEEeeCCCcccccCCCcccEEE
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      +..+++||++||-+|  .+-|.+++.+|+. .+.+|+.++.|++..+.+++    .|...-+.-...++....+.||-|+
T Consensus        66 ~kl~L~~G~~lLDiG--CGWG~l~~~aA~~-y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd~~e~fDrIv  142 (283)
T COG2230          66 EKLGLKPGMTLLDIG--CGWGGLAIYAAEE-YGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRDFEEPFDRIV  142 (283)
T ss_pred             HhcCCCCCCEEEEeC--CChhHHHHHHHHH-cCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccccccccceee
Confidence            789999999999999  3568888899998 59999999999998777653    4533222222234455556688775


Q ss_pred             e-----CCCC------cHHHHHhhccCCEEEEEcCC
Q 023273          220 D-----AVGQ------CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       220 d-----~~g~------~~~~~~~l~~~G~~v~~g~~  244 (284)
                      .     .+|.      +..+-++|+++|++.+-...
T Consensus       143 SvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~  178 (283)
T COG2230         143 SVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT  178 (283)
T ss_pred             ehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence            3     4553      37889999999999886443

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.37  E-value=0.0024  Score=52.22  Aligned_cols=95  Identities=24%  Similarity=0.391  Sum_probs=66.1

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHH----HcC-CcE--EeeCCCcc-cccCCCc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLG-ADL--AIDYTKEN-IEDLPEK  214 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~----~~g-~~~--~~~~~~~~-~~~~~~~  214 (284)
                      ...++.++++|+.+| +|. |..++.+++.++ +.+++.++.+++..+.++    .++ .+.  ++..+... .......
T Consensus        34 ~~l~~~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~  111 (198)
T PRK00377         34 SKLRLRKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEK  111 (198)
T ss_pred             HHcCCCCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCC
Confidence            467888999999999 566 888888887642 368999999998887664    345 222  22222211 2223467


Q ss_pred             ccEEEeCCCC------cHHHHHhhccCCEEEE
Q 023273          215 FDVVFDAVGQ------CDKALKAVKEGGRVVS  240 (284)
Q Consensus       215 ~d~vid~~g~------~~~~~~~l~~~G~~v~  240 (284)
                      +|.||...+.      ++.+.++|+++|+++.
T Consensus       112 ~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        112 FDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             CCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            9999986542      3677889999999985

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.35  E-value=0.0026  Score=53.10  Aligned_cols=94  Identities=23%  Similarity=0.352  Sum_probs=62.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHc---CCcEEeeCC--C-ccccc-------CCCcc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSL---GADLAIDYT--K-ENIED-------LPEKF  215 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~---g~~~~~~~~--~-~~~~~-------~~~~~  215 (284)
                      .+++++|+|++|.+|..+++.+... |++|+++++++++...+ ++.   +..+.+..+  + +....       .-+++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKE-GAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999884 99999999988877655 222   222222211  1 11111       12457


Q ss_pred             cEEEeCCCCc--------------------------HHHHHhhccCCEEEEEcCC
Q 023273          216 DVVFDAVGQC--------------------------DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       216 d~vid~~g~~--------------------------~~~~~~l~~~G~~v~~g~~  244 (284)
                      |.++.+.|..                          +..+.+++++|+++.++..
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  137 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM  137 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence            9999887631                          2345566778999988754

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=97.34  E-value=0.0057  Score=45.40  Aligned_cols=97  Identities=22%  Similarity=0.344  Sum_probs=66.1

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCcc-cccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKEN-IEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~-~~~~~~~~d  216 (284)
                      ....+.++++++-+| +|. |..+..+++...+.+++.++.++...+.+++    .+..  .++..+... .....+.+|
T Consensus        13 ~~~~~~~~~~vldlG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   90 (124)
T TIGR02469        13 SKLRLRPGDVLWDIG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPD   90 (124)
T ss_pred             HHcCCCCCCEEEEeC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCC
Confidence            445667788999999 555 8889999887545789999999888777643    3322  222222111 222245799


Q ss_pred             EEEeCCC--C----cHHHHHhhccCCEEEEEc
Q 023273          217 VVFDAVG--Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       217 ~vid~~g--~----~~~~~~~l~~~G~~v~~g  242 (284)
                      +|+...+  .    ++.+.+.|+++|++++..
T Consensus        91 ~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~  122 (124)
T TIGR02469        91 RVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA  122 (124)
T ss_pred             EEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence            9987643  1    378999999999998653

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.32  E-value=0.0015  Score=56.50  Aligned_cols=91  Identities=18%  Similarity=0.346  Sum_probs=68.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---cH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CD  226 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---~~  226 (284)
                      .|++++|+| .|.+|.+++..++.+ |++|++..+++++.+.+.+.+... +..  .++.+..+++|++++++..   ..
T Consensus       150 ~gk~v~IiG-~G~iG~avA~~L~~~-G~~V~v~~R~~~~~~~~~~~g~~~-~~~--~~l~~~l~~aDiVint~P~~ii~~  224 (287)
T TIGR02853       150 HGSNVMVLG-FGRTGMTIARTFSAL-GARVFVGARSSADLARITEMGLIP-FPL--NKLEEKVAEIDIVINTIPALVLTA  224 (287)
T ss_pred             CCCEEEEEc-ChHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCee-ecH--HHHHHHhccCCEEEECCChHHhCH
Confidence            578999999 799999999999995 899999999988877776666432 221  1233334689999999864   25


Q ss_pred             HHHHhhccCCEEEEEcCCC
Q 023273          227 KALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       227 ~~~~~l~~~G~~v~~g~~~  245 (284)
                      ..++.++++..++.++...
T Consensus       225 ~~l~~~k~~aliIDlas~P  243 (287)
T TIGR02853       225 DVLSKLPKHAVIIDLASKP  243 (287)
T ss_pred             HHHhcCCCCeEEEEeCcCC
Confidence            6778888888888776543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.30  E-value=0.0009  Score=54.01  Aligned_cols=73  Identities=18%  Similarity=0.347  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC---cEEeeCCCcc-cc-------cCCCcccEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA---DLAIDYTKEN-IE-------DLPEKFDVV  218 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~-------~~~~~~d~v  218 (284)
                      .|.+|||+|+++++|++.++-...+ |-+||++.+++++++.++...+   ..+.|-.+.+ ..       +.-...+++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~el-gN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl   82 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLEL-GNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL   82 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHh-CCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence            4789999999999999999988886 9999999999999999986443   2233322211 11       113468889


Q ss_pred             EeCCC
Q 023273          219 FDAVG  223 (284)
Q Consensus       219 id~~g  223 (284)
                      ++++|
T Consensus        83 iNNAG   87 (245)
T COG3967          83 INNAG   87 (245)
T ss_pred             eeccc
Confidence            98887

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.30  E-value=0.0017  Score=59.48  Aligned_cols=148  Identities=19%  Similarity=0.276  Sum_probs=91.4

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEE-EecCcc-------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccc
Q 023273           63 IPGYDVAGVVEKVGSQVKKFKVGDEVY-GDINEK-------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL  134 (284)
Q Consensus        63 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~-~~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  134 (284)
                      .-|+|+++-+.+|++++++.-.|+.=+ +.+.+.       ...+...++.|++.        +++|+.+..+.... ..
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a--------~~~~k~v~~~t~i~-~~  161 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKA--------FSVAKRVRTETGIG-AG  161 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHH--------HHHHhhHhhhcCCC-CC
Confidence            469999999999999988766666522 221110       01111122333332        33444444332222 22


Q ss_pred             hHHHHHHHHHhcc----cCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHH-HHHHcCCcEEeeCCCccc
Q 023273          135 ATETAYEGLERSA----FSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLD-LLRSLGADLAIDYTKENI  208 (284)
Q Consensus       135 ~~~ta~~al~~~~----~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~-~~~~~g~~~~~~~~~~~~  208 (284)
                      +...++.+++.+.    ..++++|+|+| +|.+|.+++..++.. |. +++++.++.++.. +++.++.. +++.  .+.
T Consensus       162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViG-aG~iG~~~a~~L~~~-G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~~  236 (423)
T PRK00045        162 AVSVASAAVELAKQIFGDLSGKKVLVIG-AGEMGELVAKHLAEK-GVRKITVANRTLERAEELAEEFGGE-AIPL--DEL  236 (423)
T ss_pred             CcCHHHHHHHHHHHhhCCccCCEEEEEC-chHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCc-EeeH--HHH
Confidence            3344677775332    36789999999 799999999999885 75 7888999888865 55677753 3332  122


Q ss_pred             ccCCCcccEEEeCCCC
Q 023273          209 EDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       209 ~~~~~~~d~vid~~g~  224 (284)
                      .....++|+||+|+++
T Consensus       237 ~~~l~~aDvVI~aT~s  252 (423)
T PRK00045        237 PEALAEADIVISSTGA  252 (423)
T ss_pred             HHHhccCCEEEECCCC
Confidence            2334579999999985

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.30  E-value=0.0013  Score=54.59  Aligned_cols=73  Identities=27%  Similarity=0.489  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCC--cE--EeeCCCc-c-------cccCCCccc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGA--DL--AIDYTKE-N-------IEDLPEKFD  216 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~--~~--~~~~~~~-~-------~~~~~~~~d  216 (284)
                      .++.++|+||++++|.++++..... |++++.+.+..++++.+. +++.  ..  .+|-.+. .       .++.-+.+|
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~-G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEA-GAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence            4578999999999999999998885 999999999999988775 5662  11  2232221 1       111245799


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      +.++++|
T Consensus        84 iLvNNAG   90 (246)
T COG4221          84 ILVNNAG   90 (246)
T ss_pred             EEEecCC
Confidence            9999998

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.26  E-value=0.0056  Score=48.88  Aligned_cols=96  Identities=25%  Similarity=0.407  Sum_probs=67.2

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcEE--eeCCC-cccccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLA--IDYTK-ENIEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~--~~~~~-~~~~~~~~~~d  216 (284)
                      ....+++|+.++-+|+  ++|..++++++.....++++++++++..+..+    .+|.+.+  +.-+. +.+.+.. .+|
T Consensus        28 s~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~d  104 (187)
T COG2242          28 SKLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPD  104 (187)
T ss_pred             HhhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCC
Confidence            4678899999999995  34556777776544689999999999887664    5775533  32222 2233322 689


Q ss_pred             EEEeCCC-C----cHHHHHhhccCCEEEEEc
Q 023273          217 VVFDAVG-Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       217 ~vid~~g-~----~~~~~~~l~~~G~~v~~g  242 (284)
                      .+|---| +    ++.+|+.|+++||+|.-.
T Consensus       105 aiFIGGg~~i~~ile~~~~~l~~ggrlV~na  135 (187)
T COG2242         105 AIFIGGGGNIEEILEAAWERLKPGGRLVANA  135 (187)
T ss_pred             EEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence            8876544 3    489999999999998543

>PRK12742 oxidoreductase; Provisional

Probab=97.22  E-value=0.0042  Score=51.78  Aligned_cols=73  Identities=26%  Similarity=0.414  Sum_probs=47.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH-HHcCCcEE-eeCCCc-cccc---CCCcccEEEeCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL-RSLGADLA-IDYTKE-NIED---LPEKFDVVFDAV  222 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~-~~~g~~~~-~~~~~~-~~~~---~~~~~d~vid~~  222 (284)
                      .+++++|+|++|++|...++.+... |++++++.+ ++++.+.+ .+.+...+ .|..+. .+.+   ..+.+|++|+++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a   83 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTD-GANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA   83 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence            5789999999999999999888874 888887765 44444443 34443322 222111 1111   124689999998


Q ss_pred             C
Q 023273          223 G  223 (284)
Q Consensus       223 g  223 (284)
                      |
T Consensus        84 g   84 (237)
T PRK12742         84 G   84 (237)
T ss_pred             C
Confidence            7

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.18  E-value=0.0092  Score=49.32  Aligned_cols=100  Identities=19%  Similarity=0.203  Sum_probs=66.3

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCcE--EeeCCCcccccCCCc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPEK  214 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~  214 (284)
                      .++...++++++||-+|  ++.|..++.+++..+ +.+++.++.+++-.+.+++    .+..+  ++..+..........
T Consensus        68 ~~~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~~~~~  145 (212)
T PRK13942         68 MCELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYEENAP  145 (212)
T ss_pred             HHHHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCcCCC
Confidence            34566789999999998  356777777777641 2689999999888776653    34322  222221111111357


Q ss_pred             ccEEEeCCC--C-cHHHHHhhccCCEEEEEcC
Q 023273          215 FDVVFDAVG--Q-CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       215 ~d~vid~~g--~-~~~~~~~l~~~G~~v~~g~  243 (284)
                      ||+|+-...  . +...++.|+++|+++..-+
T Consensus       146 fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~~~  177 (212)
T PRK13942        146 YDRIYVTAAGPDIPKPLIEQLKDGGIMVIPVG  177 (212)
T ss_pred             cCEEEECCCcccchHHHHHhhCCCcEEEEEEc
Confidence            999876543  2 4788999999999987643

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.14  E-value=0.0057  Score=53.77  Aligned_cols=97  Identities=25%  Similarity=0.342  Sum_probs=66.8

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC--CeEEEEeCChhhHHHHH----HcCCcEEeeCCCcc--cccCCC
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLR----SLGADLAIDYTKEN--IEDLPE  213 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~--~~~~~~  213 (284)
                      .++...++++++||.+| +| .|..++.+++.. +  ..|+.++.+++..+.++    ..+.+.+.....+.  ......
T Consensus        72 ll~~L~i~~g~~VLDIG-~G-tG~~a~~LA~~~-~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~~~  148 (322)
T PRK13943         72 FMEWVGLDKGMRVLEIG-GG-TGYNAAVMSRVV-GEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPEFA  148 (322)
T ss_pred             HHHhcCCCCCCEEEEEe-CC-ccHHHHHHHHhc-CCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccccC
Confidence            33556788999999999 55 699999999874 4  36899999988776654    35544322111111  111124


Q ss_pred             cccEEEeCCCC---cHHHHHhhccCCEEEEE
Q 023273          214 KFDVVFDAVGQ---CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       214 ~~d~vid~~g~---~~~~~~~l~~~G~~v~~  241 (284)
                      .+|+|+.+.+.   +...++.|+++|+++..
T Consensus       149 ~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        149 PYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             CccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            69999998773   46788999999998874

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.14  E-value=0.0033  Score=56.73  Aligned_cols=101  Identities=23%  Similarity=0.373  Sum_probs=69.8

Q ss_pred             HHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccE
Q 023273          139 AYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDV  217 (284)
Q Consensus       139 a~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~  217 (284)
                      .+..+ +..+++++++||.+| + +.|..+..+++. .+++|+.++.+++..+.+++......++....++....+.+|.
T Consensus       155 k~~~l~~~l~l~~g~rVLDIG-c-G~G~~a~~la~~-~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~~l~~~fD~  231 (383)
T PRK11705        155 KLDLICRKLQLKPGMRVLDIG-C-GWGGLARYAAEH-YGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYRDLNGQFDR  231 (383)
T ss_pred             HHHHHHHHhCCCCCCEEEEeC-C-CccHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhccCeEEEEECchhhcCCCCCE
Confidence            33333 567889999999999 4 577788888887 4899999999999999887643221121111122233457998


Q ss_pred             EEeC-----CCC------cHHHHHhhccCCEEEEEc
Q 023273          218 VFDA-----VGQ------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       218 vid~-----~g~------~~~~~~~l~~~G~~v~~g  242 (284)
                      |+..     +|.      ++.+.+.|+++|++++..
T Consensus       232 Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        232 IVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             EEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            8753     332      267888999999998753

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.08  E-value=0.0024  Score=52.57  Aligned_cols=98  Identities=27%  Similarity=0.364  Sum_probs=64.6

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC--eEEEEeCChhhHHHHH----HcCCcEE--eeCCCc-ccccCC
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLR----SLGADLA--IDYTKE-NIEDLP  212 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~--~vi~~~~~~~~~~~~~----~~g~~~~--~~~~~~-~~~~~~  212 (284)
                      +++...+++|++||.+|  ++.|+.++.+++.. +.  +|+.++..++-.+.++    .++...+  +..+.. .++. .
T Consensus        64 ~l~~L~l~pg~~VLeIG--tGsGY~aAlla~lv-g~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~-~  139 (209)
T PF01135_consen   64 MLEALDLKPGDRVLEIG--TGSGYQAALLAHLV-GPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPE-E  139 (209)
T ss_dssp             HHHHTTC-TT-EEEEES---TTSHHHHHHHHHH-STTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGG-G
T ss_pred             HHHHHhcCCCCEEEEec--CCCcHHHHHHHHhc-CccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcccc-C
Confidence            45667799999999998  46788888888875 43  5888888877665553    3454322  221111 1212 3


Q ss_pred             CcccEEEeCCCC---cHHHHHhhccCCEEEEEcC
Q 023273          213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       213 ~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~  243 (284)
                      ..||.|+-+.+.   +...++.|+++|++|..-.
T Consensus       140 apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi~  173 (209)
T PF01135_consen  140 APFDRIIVTAAVPEIPEALLEQLKPGGRLVAPIG  173 (209)
T ss_dssp             -SEEEEEESSBBSS--HHHHHTEEEEEEEEEEES
T ss_pred             CCcCEEEEeeccchHHHHHHHhcCCCcEEEEEEc
Confidence            479999988763   6889999999999998543

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.03  E-value=0.0047  Score=49.58  Aligned_cols=108  Identities=21%  Similarity=0.258  Sum_probs=74.3

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---  224 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---  224 (284)
                      .-.|.+|.|+| .|.+|...++.++. +|++|++.+++.+........+.. .     .++.+.....|+|+.+...   
T Consensus        33 ~l~g~tvgIiG-~G~IG~~vA~~l~~-fG~~V~~~d~~~~~~~~~~~~~~~-~-----~~l~ell~~aDiv~~~~plt~~  104 (178)
T PF02826_consen   33 ELRGKTVGIIG-YGRIGRAVARRLKA-FGMRVIGYDRSPKPEEGADEFGVE-Y-----VSLDELLAQADIVSLHLPLTPE  104 (178)
T ss_dssp             -STTSEEEEES-TSHHHHHHHHHHHH-TT-EEEEEESSCHHHHHHHHTTEE-E-----SSHHHHHHH-SEEEE-SSSSTT
T ss_pred             ccCCCEEEEEE-EcCCcCeEeeeeec-CCceeEEecccCChhhhcccccce-e-----eehhhhcchhhhhhhhhccccc
Confidence            34689999999 99999999999999 599999999987766644454431 1     1233444578999887651   


Q ss_pred             -----cHHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHHHHHHHHHHCCCeeE
Q 023273          225 -----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA  275 (284)
Q Consensus       225 -----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~  275 (284)
                           -...+..|+++..+|-++-..            -=+-+.+++.+++|++.-
T Consensus       105 T~~li~~~~l~~mk~ga~lvN~aRG~------------~vde~aL~~aL~~g~i~g  148 (178)
T PF02826_consen  105 TRGLINAEFLAKMKPGAVLVNVARGE------------LVDEDALLDALESGKIAG  148 (178)
T ss_dssp             TTTSBSHHHHHTSTTTEEEEESSSGG------------GB-HHHHHHHHHTTSEEE
T ss_pred             cceeeeeeeeeccccceEEEeccchh------------hhhhhHHHHHHhhccCce
Confidence                 178899999999888765211            112346677778888763

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.02  E-value=0.005  Score=49.24  Aligned_cols=88  Identities=26%  Similarity=0.278  Sum_probs=61.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCc---ccccCCCcccEEEeCCCC------
Q 023273          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE---NIEDLPEKFDVVFDAVGQ------  224 (284)
Q Consensus       154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~d~vid~~g~------  224 (284)
                      |+|+||+|.+|...++.+... +.+|+++.+++++...  ..+. +++.-+-.   .+.+...++|.||.+.|.      
T Consensus         1 I~V~GatG~vG~~l~~~L~~~-~~~V~~~~R~~~~~~~--~~~~-~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~   76 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRR-GHEVTALVRSPSKAED--SPGV-EIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVD   76 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHT-TSEEEEEESSGGGHHH--CTTE-EEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHH
T ss_pred             eEEECCCChHHHHHHHHHHHC-CCEEEEEecCchhccc--cccc-ccceeeehhhhhhhhhhhhcchhhhhhhhhccccc
Confidence            789999999999999999985 8999999999998876  3332 23332222   233334689999999983      


Q ss_pred             -cHHHHHhhccC--CEEEEEcCCC
Q 023273          225 -CDKALKAVKEG--GRVVSIIGSV  245 (284)
Q Consensus       225 -~~~~~~~l~~~--G~~v~~g~~~  245 (284)
                       ....++.++..  .+++.++...
T Consensus        77 ~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   77 AAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             HHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             ccccccccccccccccceeeeccc
Confidence             24455555444  4788776544

...

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.93  E-value=0.018  Score=47.37  Aligned_cols=98  Identities=16%  Similarity=0.111  Sum_probs=65.2

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCc---EEeeCCCcccccCCCc
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEK  214 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~  214 (284)
                      ++...++++++||-+|+  +.|..++.+++... +.+++.++.+++-.+.+++    .+..   .++..+..........
T Consensus        65 ~~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~~~~~  142 (205)
T PRK13944         65 CELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLEKHAP  142 (205)
T ss_pred             HHhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCccCCC
Confidence            45567889999999983  55777777777642 3689999999887666643    3421   2233222111112357


Q ss_pred             ccEEEeCCC--C-cHHHHHhhccCCEEEEEc
Q 023273          215 FDVVFDAVG--Q-CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       215 ~d~vid~~g--~-~~~~~~~l~~~G~~v~~g  242 (284)
                      ||+|+-+..  . ++.+++.|+++|+++..-
T Consensus       143 fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~  173 (205)
T PRK13944        143 FDAIIVTAAASTIPSALVRQLKDGGVLVIPV  173 (205)
T ss_pred             ccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence            999887654  2 478889999999998753

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.91  E-value=0.01  Score=49.70  Aligned_cols=99  Identities=24%  Similarity=0.263  Sum_probs=73.1

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC----Cc--EEeeCCCcccccCCCcccEE
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG----AD--LAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g----~~--~~~~~~~~~~~~~~~~~d~v  218 (284)
                      ..+..+|++||-++  +++|-.+..+++..+..+|++++.+++-++.+++--    ..  ..+..+.+.++=....||++
T Consensus        46 ~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~v  123 (238)
T COG2226          46 LLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAV  123 (238)
T ss_pred             hhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCEE
Confidence            45666999999986  678999999999865579999999999888886422    11  12333333444335679999


Q ss_pred             EeCCC-----C----cHHHHHhhccCCEEEEEcCCC
Q 023273          219 FDAVG-----Q----CDKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       219 id~~g-----~----~~~~~~~l~~~G~~v~~g~~~  245 (284)
                      ..+.|     +    +..+.|.|+|+|+++.+....
T Consensus       124 t~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~  159 (238)
T COG2226         124 TISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK  159 (238)
T ss_pred             EeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence            88777     2    378999999999999886543

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.83  E-value=0.015  Score=46.99  Aligned_cols=94  Identities=29%  Similarity=0.397  Sum_probs=62.4

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcE--EeeCCCcccccCCCcccEEEeC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~d~vid~  221 (284)
                      ++++.+||-+|+  +.|..++.+++...+.+++.++.+++..+.++    +.+.+.  ++..+...+.. .+.+|+|+..
T Consensus        43 l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~~  119 (187)
T PRK00107         43 LPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTSR  119 (187)
T ss_pred             cCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEEc
Confidence            445899999984  44566666666435789999999988776664    344322  22222222222 4579999875


Q ss_pred             C-CC----cHHHHHhhccCCEEEEEcCC
Q 023273          222 V-GQ----CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       222 ~-g~----~~~~~~~l~~~G~~v~~g~~  244 (284)
                      . +.    ++.+.+.|+++|+++.+-+.
T Consensus       120 ~~~~~~~~l~~~~~~LkpGG~lv~~~~~  147 (187)
T PRK00107        120 AVASLSDLVELCLPLLKPGGRFLALKGR  147 (187)
T ss_pred             cccCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence            3 33    36788999999999988544

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.80  E-value=0.016  Score=45.38  Aligned_cols=91  Identities=19%  Similarity=0.266  Sum_probs=63.6

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc-
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC-  225 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~-  225 (284)
                      ..-.|++++|.| -|.+|...++.++.+ |++|++++.++-+.-++..-|....      .+.+..+..|+++.++|.. 
T Consensus        19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~-Ga~V~V~e~DPi~alqA~~dGf~v~------~~~~a~~~adi~vtaTG~~~   90 (162)
T PF00670_consen   19 LMLAGKRVVVIG-YGKVGKGIARALRGL-GARVTVTEIDPIRALQAAMDGFEVM------TLEEALRDADIFVTATGNKD   90 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHT-T-EEEEE-SSHHHHHHHHHTT-EEE-------HHHHTTT-SEEEE-SSSSS
T ss_pred             eeeCCCEEEEeC-CCcccHHHHHHHhhC-CCEEEEEECChHHHHHhhhcCcEec------CHHHHHhhCCEEEECCCCcc
Confidence            346899999999 999999999999996 9999999999988887777675422      1233356789999999952 


Q ss_pred             ---HHHHHhhccCCEEEEEcCCC
Q 023273          226 ---DKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       226 ---~~~~~~l~~~G~~v~~g~~~  245 (284)
                         ..-++.|+++.-+..+|...
T Consensus        91 vi~~e~~~~mkdgail~n~Gh~d  113 (162)
T PF00670_consen   91 VITGEHFRQMKDGAILANAGHFD  113 (162)
T ss_dssp             SB-HHHHHHS-TTEEEEESSSST
T ss_pred             ccCHHHHHHhcCCeEEeccCcCc
Confidence               57788888887777666554

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.79  E-value=0.0069  Score=50.71  Aligned_cols=74  Identities=31%  Similarity=0.460  Sum_probs=51.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEE-eeCCCc-cccc---CCCcccEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLA-IDYTKE-NIED---LPEKFDVVFDAV  222 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~-~~~~~~-~~~~---~~~~~d~vid~~  222 (284)
                      ..+.+++|+|++|.+|...++.+... |.+|+++.+++++.+.+.+ .+...+ .|..+. ....   ..+++|++|++.
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~a   85 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQR-GARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCA   85 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECC
Confidence            35689999999999999999998884 8999999998877765543 333221 222221 1111   134689999988


Q ss_pred             C
Q 023273          223 G  223 (284)
Q Consensus       223 g  223 (284)
                      |
T Consensus        86 g   86 (245)
T PRK07060         86 G   86 (245)
T ss_pred             C
Confidence            7

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.78  E-value=0.034  Score=46.01  Aligned_cols=100  Identities=21%  Similarity=0.207  Sum_probs=64.9

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCcE--EeeCCCcccccCCCc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPEK  214 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~  214 (284)
                      .++...++++++||-+|  ++.|..++.+++... ..+|+.++.+++..+.+++    .+.+.  ++..+..........
T Consensus        69 ~~~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~~~  146 (215)
T TIGR00080        69 MTELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPLAP  146 (215)
T ss_pred             HHHHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCcccCC
Confidence            34556789999999998  356777777887631 2359999999887776643    44322  222221111112357


Q ss_pred             ccEEEeCCC---CcHHHHHhhccCCEEEEEcC
Q 023273          215 FDVVFDAVG---QCDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       215 ~d~vid~~g---~~~~~~~~l~~~G~~v~~g~  243 (284)
                      ||+|+-...   -++.+.+.|+++|+++..-+
T Consensus       147 fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~~  178 (215)
T TIGR00080       147 YDRIYVTAAGPKIPEALIDQLKEGGILVMPVG  178 (215)
T ss_pred             CCEEEEcCCcccccHHHHHhcCcCcEEEEEEc
Confidence            998875433   25788899999999987643

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK08317 hypothetical protein; Provisional

Probab=96.78  E-value=0.019  Score=47.83  Aligned_cols=97  Identities=25%  Similarity=0.295  Sum_probs=66.1

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChhhHHHHHHc----CCc-EEeeCCCcccccCCCcccE
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSL----GAD-LAIDYTKENIEDLPEKFDV  217 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~d~  217 (284)
                      +...+.++++||.+| +|. |..+..++... ...+++.++.+++..+.+++.    +.. .+...+....+...+.+|+
T Consensus        13 ~~~~~~~~~~vLdiG-~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~   90 (241)
T PRK08317         13 ELLAVQPGDRVLDVG-CGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFDA   90 (241)
T ss_pred             HHcCCCCCCEEEEeC-CCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCceE
Confidence            567788999999999 554 88888888874 246899999999988877654    111 1222221112222457998


Q ss_pred             EEeCCC-----C----cHHHHHhhccCCEEEEEc
Q 023273          218 VFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       218 vid~~g-----~----~~~~~~~l~~~G~~v~~g  242 (284)
                      |+....     +    +..+.++|+++|++++..
T Consensus        91 v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         91 VRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             EEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence            876422     2    378889999999998765

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.77  E-value=0.015  Score=53.16  Aligned_cols=148  Identities=20%  Similarity=0.291  Sum_probs=93.1

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEE-EecC-------ccccCCCCCCCceeeEEeeecCceee---C-CCCCCHHhhh
Q 023273           63 IPGYDVAGVVEKVGSQVKKFKVGDEVY-GDIN-------EKALDHPKRNGSLAEYTAVEENLLAL---K-PKNLSFVEAA  130 (284)
Q Consensus        63 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~-~~~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~---i-p~~~~~~~aa  130 (284)
                      .-|.|+++.+.+|++++++.-.|+.-+ +.+.       .....+...++.|++++.++. .+..   | +..++...+|
T Consensus        89 ~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A  167 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSAA  167 (417)
T ss_pred             cCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH
Confidence            468889999999999988766666532 1111       112233445678888887765 2222   3 2223321111


Q ss_pred             cccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHH-HHHHcCCcEEeeCCCccc
Q 023273          131 SLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLD-LLRSLGADLAIDYTKENI  208 (284)
Q Consensus       131 ~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~-~~~~~g~~~~~~~~~~~~  208 (284)
                              .-.+.+..+..++++|+|+| +|.+|..+++.++.. | .+++++.++.++.. .+++++.. .++.+  +.
T Consensus       168 --------v~la~~~~~~l~~~~VlViG-aG~iG~~~a~~L~~~-G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~--~l  234 (417)
T TIGR01035       168 --------VELAERIFGSLKGKKALLIG-AGEMGELVAKHLLRK-GVGKILIANRTYERAEDLAKELGGE-AVKFE--DL  234 (417)
T ss_pred             --------HHHHHHHhCCccCCEEEEEC-ChHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHcCCe-EeeHH--HH
Confidence                    11122334456789999999 799999999999885 7 68889999888755 55667653 23221  22


Q ss_pred             ccCCCcccEEEeCCCC
Q 023273          209 EDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       209 ~~~~~~~d~vid~~g~  224 (284)
                      .+...++|+||+|+++
T Consensus       235 ~~~l~~aDvVi~aT~s  250 (417)
T TIGR01035       235 EEYLAEADIVISSTGA  250 (417)
T ss_pred             HHHHhhCCEEEECCCC
Confidence            3334589999999985

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.76  E-value=0.0097  Score=52.28  Aligned_cols=90  Identities=22%  Similarity=0.303  Sum_probs=60.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe-eCC-CcccccCCCcccEEEeCCCCc-----
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYT-KENIEDLPEKFDVVFDAVGQC-----  225 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~-~~~~~~~~~~~d~vid~~g~~-----  225 (284)
                      +|+|+||+|-+|...+..+... |.+|++++++.++.......+.+.+. |.. .+.+...-+++|+||++++..     
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~-g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~   80 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDE-GYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY   80 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence            7999999999999999888874 89999999987766555544543221 221 122333356899999986521     


Q ss_pred             ----------HHHHHhhccCC--EEEEEcC
Q 023273          226 ----------DKALKAVKEGG--RVVSIIG  243 (284)
Q Consensus       226 ----------~~~~~~l~~~G--~~v~~g~  243 (284)
                                ..+++.++..|  +++.++.
T Consensus        81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss  110 (317)
T CHL00194         81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSI  110 (317)
T ss_pred             chhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence                      13445444444  8888765

>PRK06182 short chain dehydrogenase; Validated

Probab=96.75  E-value=0.0084  Score=51.31  Aligned_cols=73  Identities=26%  Similarity=0.384  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-cccccC-------CCcccEEEe
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDL-------PEKFDVVFD  220 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~-------~~~~d~vid  220 (284)
                      .+++++|+|++|++|...++.+... |.+|+++++++++.+.+...+...+ .|-.+ +.+...       .+++|++|+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQ-GYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            4678999999999999999988874 9999999998888766655443221 23221 111111       347999999


Q ss_pred             CCC
Q 023273          221 AVG  223 (284)
Q Consensus       221 ~~g  223 (284)
                      ++|
T Consensus        81 ~ag   83 (273)
T PRK06182         81 NAG   83 (273)
T ss_pred             CCC
Confidence            987

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.0089  Score=50.57  Aligned_cols=74  Identities=23%  Similarity=0.372  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEE-eeCCCc-ccccC-------CCcccEE
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLA-IDYTKE-NIEDL-------PEKFDVV  218 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~-~~~~~~-~~~~~-------~~~~d~v  218 (284)
                      -.+++++|+|++|++|...++..... |++++++++++++.+... +++...+ .|..+. .....       .+.+|++
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   83 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAE-GATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIA   83 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            35789999999999999999988884 999999999877665443 3433211 222221 11111       2468999


Q ss_pred             EeCCC
Q 023273          219 FDAVG  223 (284)
Q Consensus       219 id~~g  223 (284)
                      +.++|
T Consensus        84 i~~ag   88 (255)
T PRK06057         84 FNNAG   88 (255)
T ss_pred             EECCC
Confidence            99876

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.011  Score=50.71  Aligned_cols=73  Identities=21%  Similarity=0.363  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCCc-ccc----c----CCCcccEEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKE-NIE----D----LPEKFDVVF  219 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~-~~~----~----~~~~~d~vi  219 (284)
                      .+++++|+|++|++|.+.++.+... |.+|+++++++++.+.+.+.+...+ .|..+. ...    .    ..+.+|+++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~-G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSD-GWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            4678999999999999998888774 9999999999888877766553322 232221 111    1    124689999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +++|
T Consensus        82 ~~Ag   85 (277)
T PRK05993         82 NNGA   85 (277)
T ss_pred             ECCC
Confidence            9876

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.0092  Score=51.88  Aligned_cols=73  Identities=30%  Similarity=0.376  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCC-cEE----eeCCCc-cccc-------CCCcc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA-DLA----IDYTKE-NIED-------LPEKF  215 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~-~~~----~~~~~~-~~~~-------~~~~~  215 (284)
                      .+++++|+|++|++|..+++.... .|++|+++.+++++.+.+ ++++. ..+    .|-.+. ....       ..+.+
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHA-RGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI   86 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999998887 499999999988877655 34442 111    222211 1111       12579


Q ss_pred             cEEEeCCC
Q 023273          216 DVVFDAVG  223 (284)
Q Consensus       216 d~vid~~g  223 (284)
                      |++|+++|
T Consensus        87 d~vI~nAG   94 (296)
T PRK05872         87 DVVVANAG   94 (296)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.0095  Score=51.00  Aligned_cols=71  Identities=18%  Similarity=0.329  Sum_probs=50.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-ccccc-------CCCcccEEEeCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIED-------LPEKFDVVFDAV  222 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~-------~~~~~d~vid~~  222 (284)
                      ++++|+|++|++|...++.+... |++|+++++++++.+.+.+.+...+ .|..+ +.+.+       ..+++|++|+++
T Consensus         2 k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAA-GYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            47999999999999999888874 9999999998887776665553322 23222 11111       125799999998


Q ss_pred             C
Q 023273          223 G  223 (284)
Q Consensus       223 g  223 (284)
                      |
T Consensus        81 g   81 (274)
T PRK05693         81 G   81 (274)
T ss_pred             C
Confidence            7

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.61  E-value=0.0053  Score=57.74  Aligned_cols=79  Identities=20%  Similarity=0.246  Sum_probs=55.0

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-c--------CC-----cEEe--eCCC-cc
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-L--------GA-----DLAI--DYTK-EN  207 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~--------g~-----~~~~--~~~~-~~  207 (284)
                      ..+.+.|++++|+||+|.+|..+++.+... |.+|++++++.++...+.+ +        |.     ..++  |-.+ +.
T Consensus        74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~-G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es  152 (576)
T PLN03209         74 ELDTKDEDLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ  152 (576)
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence            466778999999999999999999888874 9999999998887654421 1        11     1122  2211 22


Q ss_pred             cccCCCcccEEEeCCCC
Q 023273          208 IEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       208 ~~~~~~~~d~vid~~g~  224 (284)
                      +...-+++|+||+++|.
T Consensus       153 I~~aLggiDiVVn~AG~  169 (576)
T PLN03209        153 IGPALGNASVVICCIGA  169 (576)
T ss_pred             HHHHhcCCCEEEEcccc
Confidence            22334689999999873

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.61  E-value=0.01  Score=48.22  Aligned_cols=75  Identities=28%  Similarity=0.352  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-c----CCcE-EeeCC-CcccccCCCcccEEEeC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-L----GADL-AIDYT-KENIEDLPEKFDVVFDA  221 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~----g~~~-~~~~~-~~~~~~~~~~~d~vid~  221 (284)
                      ..+.+++|+|++|.+|..++..+... +.+++++.++.++.+.+.+ +    +... ..+.. .++....-.++|+||.+
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~-g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a  104 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLARE-GARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA  104 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence            35789999998999999888887774 8899999998887665532 2    2211 11111 11222334679999998


Q ss_pred             CCC
Q 023273          222 VGQ  224 (284)
Q Consensus       222 ~g~  224 (284)
                      +..
T Consensus       105 t~~  107 (194)
T cd01078         105 GAA  107 (194)
T ss_pred             CCC
Confidence            764

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.011  Score=52.42  Aligned_cols=74  Identities=26%  Similarity=0.484  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcE-Ee--eCCC-ccccc-------CCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI--DYTK-ENIED-------LPE  213 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-~~--~~~~-~~~~~-------~~~  213 (284)
                      ..+++++|+|++|++|.+.++.+... |++|+++.+++++++.+    ++.+.+. ++  |-.+ +...+       ..+
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~-G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARR-GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            35789999999999999999988884 99999999988877544    3345332 22  2221 11111       135


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        84 ~iD~lVnnAG   93 (330)
T PRK06139         84 RIDVWVNNVG   93 (330)
T ss_pred             CCCEEEECCC
Confidence            7999999987

>PRK14967 putative methyltransferase; Provisional

Probab=96.60  E-value=0.049  Score=45.33  Aligned_cols=95  Identities=22%  Similarity=0.246  Sum_probs=62.0

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-EEeeCCCcccccCCCcccEE
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~d~v  218 (284)
                      ....++++++||-.| +|. |..++.+++. +..+++.++.+++..+.+++    .+.. .+++.+.... ...+.+|+|
T Consensus        30 ~~~~~~~~~~vLDlG-cG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~-~~~~~fD~V  105 (223)
T PRK14967         30 AAEGLGPGRRVLDLC-TGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA-VEFRPFDVV  105 (223)
T ss_pred             HhcccCCCCeEEEec-CCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh-ccCCCeeEE
Confidence            445678899999999 565 8888888875 34489999999987776543    3322 2232221111 113579999


Q ss_pred             EeCCC---C---------------------------cHHHHHhhccCCEEEEEc
Q 023273          219 FDAVG---Q---------------------------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       219 id~~g---~---------------------------~~~~~~~l~~~G~~v~~g  242 (284)
                      +.+..   .                           +..+.+.|+++|+++++.
T Consensus       106 i~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~  159 (223)
T PRK14967        106 VSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ  159 (223)
T ss_pred             EECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            87521   0                           134678999999998753

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.57  E-value=0.011  Score=48.98  Aligned_cols=71  Identities=20%  Similarity=0.362  Sum_probs=48.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe--eCCC-ccccc----C-CCcccEEEeCCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTK-ENIED----L-PEKFDVVFDAVG  223 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~-~~~~~----~-~~~~d~vid~~g  223 (284)
                      ++++|+|++|++|...++..... |++|+++++++++.+.+++.+....+  |-.+ +...+    . .+++|++|.++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLER-GWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhC-CCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            47999999999999988887774 99999999988777666554422222  2111 11111    1 246999998875

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.56  E-value=0.013  Score=49.57  Aligned_cols=43  Identities=33%  Similarity=0.462  Sum_probs=37.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      ..+++++|+|++|.+|..++..+... |++|+++.+++++.+.+
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~   49 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQA-GAKVVLASRRVERLKEL   49 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            46789999999999999999988884 99999999988876555

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.54  E-value=0.014  Score=49.91  Aligned_cols=73  Identities=23%  Similarity=0.296  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcEEe--eCCC-cccc-------cCCCcccEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAI--DYTK-ENIE-------DLPEKFDVV  218 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~--~~~~-~~~~-------~~~~~~d~v  218 (284)
                      .+.+++|+||+|++|...++.+... |++++++++++++.+.+ ++++...++  |-.+ +.+.       +..+++|++
T Consensus         4 ~~~~ilVtGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   82 (273)
T PRK07825          4 RGKVVAITGGARGIGLATARALAAL-GARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVL   82 (273)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3679999999999999988887774 99999999988877654 334312222  2221 1111       113578999


Q ss_pred             EeCCC
Q 023273          219 FDAVG  223 (284)
Q Consensus       219 id~~g  223 (284)
                      |+++|
T Consensus        83 i~~ag   87 (273)
T PRK07825         83 VNNAG   87 (273)
T ss_pred             EECCC
Confidence            99987

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.54  E-value=0.011  Score=50.26  Aligned_cols=73  Identities=27%  Similarity=0.431  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCc-EEe--eCCC-ccccc-------CCCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-LAI--DYTK-ENIED-------LPEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~-~~~--~~~~-~~~~~-------~~~~~d~  217 (284)
                      .+++++|+|+++++|...++.+... |++|+++++++++.+.+.+ ++.. ..+  |-.+ +....       ..+.+|+
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAE-GARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5789999999999999999888884 9999999998887766643 3321 122  2111 11111       1246899


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|+++|
T Consensus        84 li~~ag   89 (263)
T PRK06200         84 FVGNAG   89 (263)
T ss_pred             EEECCC
Confidence            998876

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=96.53  E-value=0.011  Score=51.26  Aligned_cols=91  Identities=24%  Similarity=0.269  Sum_probs=59.9

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC-cEEeeCCCcccccCCCcccEEEeCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA-DLAIDYTKENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~~~~~d~vid~~  222 (284)
                      ..+|++||=+|  .++|.+++..++. +..+|++++.++.-.+.+++    .+. ..+.-....+.  ..+.||+|+-+.
T Consensus       159 ~~~g~~vLDvG--~GSGILaiaA~kl-GA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~~--~~~~~dlvvANI  233 (295)
T PF06325_consen  159 VKPGKRVLDVG--CGSGILAIAAAKL-GAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSEDL--VEGKFDLVVANI  233 (295)
T ss_dssp             SSTTSEEEEES---TTSHHHHHHHHT-TBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSCT--CCS-EEEEEEES
T ss_pred             ccCCCEEEEeC--CcHHHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEeccc--ccccCCEEEECC
Confidence            67889999998  3567788888886 56689999998887666543    221 22211111111  137899999876


Q ss_pred             CC------cHHHHHhhccCCEEEEEcC
Q 023273          223 GQ------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       223 g~------~~~~~~~l~~~G~~v~~g~  243 (284)
                      -.      .....++|+++|.+++.|.
T Consensus       234 ~~~vL~~l~~~~~~~l~~~G~lIlSGI  260 (295)
T PF06325_consen  234 LADVLLELAPDIASLLKPGGYLILSGI  260 (295)
T ss_dssp             -HHHHHHHHHHCHHHEEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHhhCCCCEEEEccc
Confidence            52      2667889999999997773

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

Probab=96.51  E-value=0.072  Score=41.39  Aligned_cols=108  Identities=19%  Similarity=0.257  Sum_probs=66.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC--ChhhHHHHHH----cCC---cE-------EeeC---------CCcc
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS--STAKLDLLRS----LGA---DL-------AIDY---------TKEN  207 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~--~~~~~~~~~~----~g~---~~-------~~~~---------~~~~  207 (284)
                      +|.|+| .|.+|...++.+.......++++..  +++-...+-+    .|.   +.       +++-         +...
T Consensus         2 kv~I~G-~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~   80 (149)
T smart00846        2 KVGING-FGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPAN   80 (149)
T ss_pred             EEEEEC-cCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHH
Confidence            578999 6999999888877544566665443  4444444422    221   10       0110         0011


Q ss_pred             cccCCCcccEEEeCCCCc---HHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHH
Q 023273          208 IEDLPEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSIL  261 (284)
Q Consensus       208 ~~~~~~~~d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  261 (284)
                      ++....++|+|+||+|.+   +.+...+..+.+-|+++.|......+|+++.+.+.+
T Consensus        81 ~~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~~~~~~t~V~GvN~~~~  137 (149)
T smart00846       81 LPWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPAKDADKTFVYGVNHDEY  137 (149)
T ss_pred             CcccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCCCCCCceEEEeechHHc
Confidence            111234799999999963   556678888888888988876544467777666544

GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.50  E-value=0.012  Score=49.91  Aligned_cols=44  Identities=32%  Similarity=0.469  Sum_probs=37.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS  194 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~  194 (284)
                      .+++++|+|++|++|...++.+... |++|+++.++.++.+.+++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~l~~   47 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAE-GARVAVLDKSAAGLQELEA   47 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh
Confidence            5789999999999999999888774 9999999998877766654

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=96.49  E-value=0.034  Score=47.07  Aligned_cols=93  Identities=20%  Similarity=0.205  Sum_probs=62.6

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-cEEeeCCCcccccCCCcccEEEeCCC-
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDAVG-  223 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~d~vid~~g-  223 (284)
                      ....++++||-+| +|. |..+..+++.  +.+++.++.+++.++.+++... ...+..+...++-..+.+|+|+.... 
T Consensus        38 l~~~~~~~vLDiG-cG~-G~~~~~l~~~--~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~~~~~~~~fD~V~s~~~l  113 (251)
T PRK10258         38 LPQRKFTHVLDAG-CGP-GWMSRYWRER--GSQVTALDLSPPMLAQARQKDAADHYLAGDIESLPLATATFDLAWSNLAV  113 (251)
T ss_pred             cCccCCCeEEEee-CCC-CHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCCCCCEEEcCcccCcCCCCcEEEEEECchh
Confidence            3445678999999 554 6666666653  7899999999999888876542 22232222222222356999987643 


Q ss_pred             ----C----cHHHHHhhccCCEEEEEc
Q 023273          224 ----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       224 ----~----~~~~~~~l~~~G~~v~~g  242 (284)
                          +    +..+.+.|+++|.+++..
T Consensus       114 ~~~~d~~~~l~~~~~~Lk~gG~l~~~~  140 (251)
T PRK10258        114 QWCGNLSTALRELYRVVRPGGVVAFTT  140 (251)
T ss_pred             hhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence                2    367888999999998764

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.018  Score=50.07  Aligned_cols=73  Identities=25%  Similarity=0.450  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-EEeeCC--C-ccccc-------CCCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYT--K-ENIED-------LPEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~--~-~~~~~-------~~~~  214 (284)
                      .+.+++|+|++|++|.+.++.+... |++|++++++.++.+.+.+    .+.. ..+..+  + +...+       ..+.
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~-G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  117 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARR-GATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG  117 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4578999999999999999888774 9999999998877655432    2321 122211  1 11111       1247


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++++++|
T Consensus       118 id~li~~AG  126 (293)
T PRK05866        118 VDILINNAG  126 (293)
T ss_pred             CCEEEECCC
Confidence            999999987

>PRK06196 oxidoreductase; Provisional

Probab=96.43  E-value=0.016  Score=50.81  Aligned_cols=73  Identities=18%  Similarity=0.342  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEe--eCCC-ccccc-------CCCcccEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAI--DYTK-ENIED-------LPEKFDVV  218 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~--~~~~-~~~~~-------~~~~~d~v  218 (284)
                      .+.+++|+|++|++|.+++...... |.+|+++.+++++.+.+. ++.....+  |-.+ +....       ..+++|++
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~-G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l  103 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQA-GAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL  103 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            4689999999999999988887774 999999999887765442 22211222  2211 11111       12579999


Q ss_pred             EeCCC
Q 023273          219 FDAVG  223 (284)
Q Consensus       219 id~~g  223 (284)
                      |+++|
T Consensus       104 i~nAg  108 (315)
T PRK06196        104 INNAG  108 (315)
T ss_pred             EECCC
Confidence            99887

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=96.42  E-value=0.041  Score=46.73  Aligned_cols=95  Identities=22%  Similarity=0.224  Sum_probs=66.1

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCC
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~  222 (284)
                      +......++++||-+|+ | .|..+..+++...+.+++.++.+++-.+.+++.+.+ ++..+...+. ..+.+|+|+...
T Consensus        22 l~~l~~~~~~~vLDlGc-G-~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~-~~~~d~~~~~-~~~~fD~v~~~~   97 (255)
T PRK14103         22 LARVGAERARRVVDLGC-G-PGNLTRYLARRWPGAVIEALDSSPEMVAAARERGVD-ARTGDVRDWK-PKPDTDVVVSNA   97 (255)
T ss_pred             HHhCCCCCCCEEEEEcC-C-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCc-EEEcChhhCC-CCCCceEEEEeh
Confidence            34566788899999993 3 367777787764367999999999988888776543 2222222222 235799998764


Q ss_pred             C-----C----cHHHHHhhccCCEEEEE
Q 023273          223 G-----Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       223 g-----~----~~~~~~~l~~~G~~v~~  241 (284)
                      .     +    ...+.+.|+++|++++.
T Consensus        98 ~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         98 ALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             hhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            3     2    25788889999999875

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.016  Score=49.01  Aligned_cols=72  Identities=22%  Similarity=0.318  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh-hhHHHHHHcCCcEEe--eCCC-cccccCCCcccEEEeCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLAI--DYTK-ENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~~~~~~~g~~~~~--~~~~-~~~~~~~~~~d~vid~~g  223 (284)
                      .+++++|+|++|++|.+.++..... |++|+++++++ ++.+.... +....+  |-.+ +...+.-+.+|++|+++|
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~-G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG   88 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAK-GAKVIGLTHSKINNSESNDE-SPNEWIKWECGKEESLDKQLASLDVLILNHG   88 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEECCchhhhhhhcc-CCCeEEEeeCCCHHHHHHhcCCCCEEEECCc
Confidence            3679999999999999988887774 99999998865 22222111 111222  2211 112223457999999987

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.39  E-value=0.029  Score=48.45  Aligned_cols=142  Identities=21%  Similarity=0.248  Sum_probs=84.6

Q ss_pred             CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH--hcccCCCCEEEEEcC
Q 023273           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE--RSAFSAGKSILVLGG  159 (284)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~--~~~~~~g~~vlI~ga  159 (284)
                      .+.|+|.+..+            +|.++..-....++++.+++-+    .......|++ +++  ....++|++|+=+| 
T Consensus       109 ~rig~~f~I~P------------sw~~~~~~~~~~~i~lDPGlAF----GTG~HpTT~l-cL~~Le~~~~~g~~vlDvG-  170 (300)
T COG2264         109 VRIGERFVIVP------------SWREYPEPSDELNIELDPGLAF----GTGTHPTTSL-CLEALEKLLKKGKTVLDVG-  170 (300)
T ss_pred             EEeeeeEEECC------------CCccCCCCCCceEEEEcccccc----CCCCChhHHH-HHHHHHHhhcCCCEEEEec-
Confidence            55677665543            3444332223455677666633    1223332322 332  23456999999999 


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcEEeeCCCcccc--cCCCcccEEEeCCC-C-----cHH
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIE--DLPEKFDVVFDAVG-Q-----CDK  227 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~--~~~~~~d~vid~~g-~-----~~~  227 (284)
                       .+.|.+++..++. +..+++.++.++--.+.+++    .+.............  ...+.+|+|+-+.= .     .++
T Consensus       171 -cGSGILaIAa~kL-GA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~  248 (300)
T COG2264         171 -CGSGILAIAAAKL-GAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPD  248 (300)
T ss_pred             -CChhHHHHHHHHc-CCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHH
Confidence             4568899988887 56679999998776665543    222210101111111  11358999998753 2     278


Q ss_pred             HHHhhccCCEEEEEcC
Q 023273          228 ALKAVKEGGRVVSIIG  243 (284)
Q Consensus       228 ~~~~l~~~G~~v~~g~  243 (284)
                      ..++++++|++++.|.
T Consensus       249 ~~~~lkpgg~lIlSGI  264 (300)
T COG2264         249 IKRLLKPGGRLILSGI  264 (300)
T ss_pred             HHHHcCCCceEEEEee
Confidence            8999999999998774

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.38  E-value=0.014  Score=50.10  Aligned_cols=96  Identities=26%  Similarity=0.413  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcE-Ee----eCCC-cccc-------cC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI----DYTK-ENIE-------DL  211 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-~~----~~~~-~~~~-------~~  211 (284)
                      -.++.|+|+||++++|.+++.-.... |++.+.+.+..++++.+    ++.++.. ++    |-.+ ++.+       ..
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~-G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~   88 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKR-GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH   88 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhC-CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence            36889999999999998866555553 99999999887777666    3444322 21    1111 1111       12


Q ss_pred             CCcccEEEeCCCC----c------------------------HHHHHhhccC--CEEEEEcCCC
Q 023273          212 PEKFDVVFDAVGQ----C------------------------DKALKAVKEG--GRVVSIIGSV  245 (284)
Q Consensus       212 ~~~~d~vid~~g~----~------------------------~~~~~~l~~~--G~~v~~g~~~  245 (284)
                      -+++|+.++++|-    +                        +.++..|++.  |+||.++...
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSia  152 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIA  152 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccc
Confidence            4689999999881    0                        2466666654  9999986543

>PRK04148 hypothetical protein; Provisional

Probab=96.38  E-value=0.026  Score=42.86  Aligned_cols=74  Identities=15%  Similarity=0.163  Sum_probs=52.3

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~  224 (284)
                      ...+.+++++| +| .|...+..+..+ |.+|++++.+++..+.+++.+...+.+.-...-.+..+++|+++..-..
T Consensus        14 ~~~~~kileIG-~G-fG~~vA~~L~~~-G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirpp   87 (134)
T PRK04148         14 KGKNKKIVELG-IG-FYFKVAKKLKES-GFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRPP   87 (134)
T ss_pred             cccCCEEEEEE-ec-CCHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCCC
Confidence            34568899999 77 887555555564 9999999999999999988876544432222223335688888887654

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.38  E-value=0.023  Score=44.13  Aligned_cols=100  Identities=24%  Similarity=0.305  Sum_probs=60.9

Q ss_pred             HHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcEEeeCCCcccccCCCcccEEE
Q 023273          142 GLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       142 al~~~~~-~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      +++..+. ..+.+++|+| +|.+|...++.....++.+++++++++++.+.+ ++++... +.....+..+..+++|+++
T Consensus         9 a~~~~~~~~~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dvvi   86 (155)
T cd01065           9 ALEEAGIELKGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAYLDLEELLAEADLII   86 (155)
T ss_pred             HHHhhCCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceeecchhhccccCCEEE
Confidence            4443333 5578999999 699999988888774236788889888776654 4444321 0011112223347899999


Q ss_pred             eCCCCcH-------HHHHhhccCCEEEEEcC
Q 023273          220 DAVGQCD-------KALKAVKEGGRVVSIIG  243 (284)
Q Consensus       220 d~~g~~~-------~~~~~l~~~G~~v~~g~  243 (284)
                      .|+....       .....++++..++.++.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~  117 (155)
T cd01065          87 NTTPVGMKPGDELPLPPSLLKPGGVVYDVVY  117 (155)
T ss_pred             eCcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence            9987421       12244566666665543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.33  E-value=0.025  Score=48.07  Aligned_cols=76  Identities=29%  Similarity=0.441  Sum_probs=50.5

Q ss_pred             ccCCCCEEEEEcCCc-hHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-----cCCcEE--e--eCCCc-cccc-----
Q 023273          147 AFSAGKSILVLGGAG-GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-----LGADLA--I--DYTKE-NIED-----  210 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g-~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-----~g~~~~--~--~~~~~-~~~~-----  210 (284)
                      .+..+++++|+|++| ++|.+.++.+... |++|+++++++++.+...+     ++...+  +  |..+. ....     
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   91 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEE-GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA   91 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            345678999999886 8999999998884 9999999888776654422     342222  2  22111 1111     


Q ss_pred             --CCCcccEEEeCCC
Q 023273          211 --LPEKFDVVFDAVG  223 (284)
Q Consensus       211 --~~~~~d~vid~~g  223 (284)
                        ..+.+|++|+++|
T Consensus        92 ~~~~g~id~li~~ag  106 (262)
T PRK07831         92 VERLGRLDVLVNNAG  106 (262)
T ss_pred             HHHcCCCCEEEECCC
Confidence              1247899999987

>PLN02244 tocopherol O-methyltransferase

Probab=96.30  E-value=0.057  Score=48.01  Aligned_cols=92  Identities=21%  Similarity=0.221  Sum_probs=61.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc---EEeeCCCcccccCCCcccEEEeC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~d~vid~  221 (284)
                      +++++||-+|+  +.|..+..+++.. +++++.++.+++..+.+++    .+..   .++..+....+-..+.||+|+..
T Consensus       117 ~~~~~VLDiGC--G~G~~~~~La~~~-g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~~~~~FD~V~s~  193 (340)
T PLN02244        117 KRPKRIVDVGC--GIGGSSRYLARKY-GANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSM  193 (340)
T ss_pred             CCCCeEEEecC--CCCHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCCCCCCccEEEEC
Confidence            78899999983  5567778888874 8999999999887766654    2321   12222211222224579999865


Q ss_pred             CC-----C----cHHHHHhhccCCEEEEEcC
Q 023273          222 VG-----Q----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       222 ~g-----~----~~~~~~~l~~~G~~v~~g~  243 (284)
                      ..     +    +..+.+.|+++|++++...
T Consensus       194 ~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        194 ESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             CchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            32     1    2678899999999998753

>PRK05854 short chain dehydrogenase; Provisional

Probab=96.30  E-value=0.023  Score=49.81  Aligned_cols=42  Identities=24%  Similarity=0.335  Sum_probs=35.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|+++++|.++++.+... |++|+++.+++++.+.+
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~-G~~Vil~~R~~~~~~~~   54 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAA-GAEVILPVRNRAKGEAA   54 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999988877774 89999999987765544

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.30  E-value=0.061  Score=45.11  Aligned_cols=36  Identities=28%  Similarity=0.436  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      .+++++|+|++|++|...+..+... |.+|+++.++.
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~-G~~V~~~~r~~   40 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGA-GAHVVVNYRQK   40 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHC-CCEEEEEeCCc
Confidence            4689999999999999999888774 89999888764

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=96.28  E-value=0.013  Score=40.91  Aligned_cols=78  Identities=28%  Similarity=0.304  Sum_probs=54.4

Q ss_pred             hHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE---EeeCCCcccccCCCcccEEEeCCC-----C----cHHHH
Q 023273          162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL---AIDYTKENIEDLPEKFDVVFDAVG-----Q----CDKAL  229 (284)
Q Consensus       162 ~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~d~vid~~g-----~----~~~~~  229 (284)
                      +.|..+..+++. .+.++++++.+++..+.+++.....   +...+...++-..+.+|+|+....     .    .+.+.
T Consensus         6 G~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~sfD~v~~~~~~~~~~~~~~~l~e~~   84 (95)
T PF08241_consen    6 GTGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAEDLPFPDNSFDVVFSNSVLHHLEDPEAALREIY   84 (95)
T ss_dssp             TTSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTSSSS-TT-EEEEEEESHGGGSSHHHHHHHHHH
T ss_pred             cCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchheeehHHhCccccccccccccccceeeccCHHHHHHHHH
Confidence            478888888887 5899999999999888887655322   333333333333568999987543     1    27899


Q ss_pred             HhhccCCEEEE
Q 023273          230 KAVKEGGRVVS  240 (284)
Q Consensus       230 ~~l~~~G~~v~  240 (284)
                      +.|+++|++++
T Consensus        85 rvLk~gG~l~~   95 (95)
T PF08241_consen   85 RVLKPGGRLVI   95 (95)
T ss_dssp             HHEEEEEEEEE
T ss_pred             HHcCcCeEEeC
Confidence            99999999974

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.26  E-value=0.0072  Score=48.01  Aligned_cols=91  Identities=29%  Similarity=0.390  Sum_probs=64.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC-CCc--------------------ccc
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY-TKE--------------------NIE  209 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~-~~~--------------------~~~  209 (284)
                      ..+|+|+| +|.+|..|+++++.+ |+++++.+..+++.+..+..+...+... ...                    .+.
T Consensus        20 p~~vvv~G-~G~vg~gA~~~~~~l-Ga~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   20 PAKVVVTG-AGRVGQGAAEIAKGL-GAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHT-T-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CeEEEEEC-CCHHHHHHHHHHhHC-CCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            47889999 899999999999997 9999999999999988888776543221 110                    011


Q ss_pred             cCCCcccEEEeCC---CC--c----HHHHHhhccCCEEEEEcC
Q 023273          210 DLPEKFDVVFDAV---GQ--C----DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       210 ~~~~~~d~vid~~---g~--~----~~~~~~l~~~G~~v~~g~  243 (284)
                      +.-..+|++|.+.   +.  +    +..++.|+++..++.++.
T Consensus        98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~  140 (168)
T PF01262_consen   98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC  140 (168)
T ss_dssp             HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred             HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence            1123689998653   21  2    788999998888888743

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.24  E-value=0.025  Score=48.08  Aligned_cols=43  Identities=21%  Similarity=0.338  Sum_probs=36.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .++.+++|+|++|++|...++.+... |++|+++++++++.+.+
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~   50 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEA-GADVLIAARTESQLDEV   50 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            35789999999999999999988874 99999999987766544

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.23  E-value=0.022  Score=48.84  Aligned_cols=73  Identities=29%  Similarity=0.328  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc--EEe--eCCCc-ccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAI--DYTKE-NIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~--~~~--~~~~~-~~~~~-------~~~~d~  217 (284)
                      .+++++|+|++|++|.+.++.+... |.+|+++++++++.+.+.+....  ..+  |..+. .+...       -+++|+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAA-GHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV   81 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhC-cCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4578999999999999999888774 99999999988877665543221  112  22111 11111       236899


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +++++|
T Consensus        82 vv~~ag   87 (277)
T PRK06180         82 LVNNAG   87 (277)
T ss_pred             EEECCC
Confidence            999987

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.23  E-value=0.051  Score=50.21  Aligned_cols=73  Identities=27%  Similarity=0.410  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh--hhHHHH-HHcCCcE-EeeCCCcc-ccc-------CCCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST--AKLDLL-RSLGADL-AIDYTKEN-IED-------LPEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~--~~~~~~-~~~g~~~-~~~~~~~~-~~~-------~~~~~d~  217 (284)
                      ++++++|+|++|++|...++.+... |++++++++++  ++.+.+ ++++... ..|-.+.. ...       ..+++|+
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~-Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARD-GAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            5789999999999999999988874 99999988743  233322 3444322 22322211 111       1236999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|+++|
T Consensus       288 vi~~AG  293 (450)
T PRK08261        288 VVHNAG  293 (450)
T ss_pred             EEECCC
Confidence            999987

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.023  Score=47.95  Aligned_cols=42  Identities=29%  Similarity=0.382  Sum_probs=36.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|+++++|.+.++.+... |++|+++.+++++.+.+
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   49 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEA-GAQVAIAARHLDALEKL   49 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHH
Confidence            4789999999999999999888874 99999999987766544

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.22  E-value=0.036  Score=40.11  Aligned_cols=86  Identities=22%  Similarity=0.337  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc---H
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---D  226 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~  226 (284)
                      .|.+|||+| .|.+|..-++.+... |++++++....   ...+  +.-....   ..+.+.-.++++|+-++++.   +
T Consensus         6 ~~~~vlVvG-gG~va~~k~~~Ll~~-gA~v~vis~~~---~~~~--~~i~~~~---~~~~~~l~~~~lV~~at~d~~~n~   75 (103)
T PF13241_consen    6 KGKRVLVVG-GGPVAARKARLLLEA-GAKVTVISPEI---EFSE--GLIQLIR---REFEEDLDGADLVFAATDDPELNE   75 (103)
T ss_dssp             TT-EEEEEE-ESHHHHHHHHHHCCC-TBEEEEEESSE---HHHH--TSCEEEE---SS-GGGCTTESEEEE-SS-HHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCch---hhhh--hHHHHHh---hhHHHHHhhheEEEecCCCHHHHH
Confidence            578999999 799999999988884 89999998875   2222  1111111   12233357899999999873   5


Q ss_pred             HHHHhhccCCEEEEEcCCC
Q 023273          227 KALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       227 ~~~~~l~~~G~~v~~g~~~  245 (284)
                      .+.+..+..|.++......
T Consensus        76 ~i~~~a~~~~i~vn~~D~p   94 (103)
T PF13241_consen   76 AIYADARARGILVNVVDDP   94 (103)
T ss_dssp             HHHHHHHHTTSEEEETT-C
T ss_pred             HHHHHHhhCCEEEEECCCc
Confidence            5566666688888776443

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.22  E-value=0.017  Score=47.98  Aligned_cols=89  Identities=28%  Similarity=0.387  Sum_probs=64.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc--EEeeCCCcccc---cCCCcccEEEeC--
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAIDYTKENIE---DLPEKFDVVFDA--  221 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~---~~~~~~d~vid~--  221 (284)
                      -+|.+||-+|+.|  |+++.-+|+.  |+.|...+.+++..+.++.....  ..+|+......   ..++.||+|+..  
T Consensus        58 l~g~~vLDvGCGg--G~Lse~mAr~--Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~~edl~~~~~~FDvV~cmEV  133 (243)
T COG2227          58 LPGLRVLDVGCGG--GILSEPLARL--GASVTGIDASEKPIEVAKLHALESGVNIDYRQATVEDLASAGGQFDVVTCMEV  133 (243)
T ss_pred             CCCCeEEEecCCc--cHhhHHHHHC--CCeeEEecCChHHHHHHHHhhhhccccccchhhhHHHHHhcCCCccEEEEhhH
Confidence            5899999999544  5788888886  89999999999999888743221  12455543333   334689999864  


Q ss_pred             ---CCCc----HHHHHhhccCCEEEEE
Q 023273          222 ---VGQC----DKALKAVKEGGRVVSI  241 (284)
Q Consensus       222 ---~g~~----~~~~~~l~~~G~~v~~  241 (284)
                         +.++    ..+.++++|+|.+++-
T Consensus       134 lEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         134 LEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             HHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence               3333    5788999999998754

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=96.21  E-value=0.074  Score=42.86  Aligned_cols=94  Identities=23%  Similarity=0.340  Sum_probs=61.5

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCcccccCCCcccE
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFDV  217 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~d~  217 (284)
                      ....+.++++||-+|+  +.|..++.+++...+.+++.++.+++..+.+++    .+..  .++..+.  .....+.+|+
T Consensus        25 ~~l~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d~--~~~~~~~~D~  100 (187)
T PRK08287         25 SKLELHRAKHLIDVGA--GTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGEA--PIELPGKADA  100 (187)
T ss_pred             HhcCCCCCCEEEEECC--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecCc--hhhcCcCCCE
Confidence            4556778999999983  346777777776335799999999987776643    3322  2222211  1122457999


Q ss_pred             EEeCCC--C----cHHHHHhhccCCEEEEE
Q 023273          218 VFDAVG--Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       218 vid~~g--~----~~~~~~~l~~~G~~v~~  241 (284)
                      ++....  .    ...+.+.|+++|+++..
T Consensus       101 v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287        101 IFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             EEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence            886432  2    26788999999999763

>PLN03139 formate dehydrogenase; Provisional

Probab=96.19  E-value=0.052  Score=48.98  Aligned_cols=106  Identities=21%  Similarity=0.290  Sum_probs=73.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~-----  224 (284)
                      .|++|.|+| .|.+|...++.++. +|.++++.+++....+..++.+....     .++.+.....|+|+.+...     
T Consensus       198 ~gktVGIVG-~G~IG~~vA~~L~a-fG~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~sDvV~l~lPlt~~T~  270 (386)
T PLN03139        198 EGKTVGTVG-AGRIGRLLLQRLKP-FNCNLLYHDRLKMDPELEKETGAKFE-----EDLDAMLPKCDVVVINTPLTEKTR  270 (386)
T ss_pred             CCCEEEEEe-ecHHHHHHHHHHHH-CCCEEEEECCCCcchhhHhhcCceec-----CCHHHHHhhCCEEEEeCCCCHHHH
Confidence            678999999 99999999999999 59999998876544444445553211     1244445678999887652     


Q ss_pred             ---cHHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHHHHHHHHHHCCCee
Q 023273          225 ---CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (284)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  274 (284)
                         -...+..|+++..+|.++-..            --+-+.+++.+++|+|.
T Consensus       271 ~li~~~~l~~mk~ga~lIN~aRG~------------iVDe~AL~~AL~sG~l~  311 (386)
T PLN03139        271 GMFNKERIAKMKKGVLIVNNARGA------------IMDTQAVADACSSGHIG  311 (386)
T ss_pred             HHhCHHHHhhCCCCeEEEECCCCc------------hhhHHHHHHHHHcCCce
Confidence               156888888888887665211            12345566666777764

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.03  Score=47.70  Aligned_cols=42  Identities=19%  Similarity=0.302  Sum_probs=36.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|+++++|.+.++.+... |++|+++++++++.+.+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~   48 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARA-GADVILLSRNEENLKKA   48 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5789999999999999999888874 99999999987776544

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.19  E-value=0.024  Score=45.13  Aligned_cols=91  Identities=21%  Similarity=0.303  Sum_probs=63.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC--CcEEeeCCCcccccCCCcccEEEeCCCCc----
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG--ADLAIDYTKENIEDLPEKFDVVFDAVGQC----  225 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~d~vid~~g~~----  225 (284)
                      ..|.|+||+|..|...++-|+. +|..|+++++++.|....+...  ...+++..  .+.+...|+|+||++.|..    
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~-RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~--~~a~~l~g~DaVIsA~~~~~~~~   77 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALK-RGHEVTAIVRNASKLAARQGVTILQKDIFDLT--SLASDLAGHDAVISAFGAGASDN   77 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHh-CCCeeEEEEeChHhccccccceeecccccChh--hhHhhhcCCceEEEeccCCCCCh
Confidence            3688999999999999999998 4999999999999886542211  11222221  1223357999999998731    


Q ss_pred             --------HHHHHhhccC--CEEEEEcCCC
Q 023273          226 --------DKALKAVKEG--GRVVSIIGSV  245 (284)
Q Consensus       226 --------~~~~~~l~~~--G~~v~~g~~~  245 (284)
                              +.++..|+..  -|+..+|+.+
T Consensus        78 ~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          78 DELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             hHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence                    3366677663  6888888764

>PLN03075 nicotianamine synthase; Provisional

Probab=96.19  E-value=0.092  Score=45.48  Aligned_cols=93  Identities=19%  Similarity=0.160  Sum_probs=63.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChhhHHHHHHcC-C----cEEee---CCCcccccCCCcccEEE
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSLG-A----DLAID---YTKENIEDLPEKFDVVF  219 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~~~g-~----~~~~~---~~~~~~~~~~~~~d~vi  219 (284)
                      .+.++|+-+| +|+.++.++.+++.+ .+.+++.++.+++..+.+++.- .    ..-+.   .+..+.....+.||+||
T Consensus       122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF  200 (296)
T PLN03075        122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVF  200 (296)
T ss_pred             CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEE
Confidence            3789999999 899999888888654 3567999999999888886533 1    11111   11111111236899998


Q ss_pred             eCCC------C----cHHHHHhhccCCEEEEEc
Q 023273          220 DAVG------Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       220 d~~g------~----~~~~~~~l~~~G~~v~~g  242 (284)
                      -.+-      .    ++...+.|+++|.++.=.
T Consensus       201 ~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        201 LAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             EecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            7742      2    267889999999997543

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.024  Score=48.01  Aligned_cols=76  Identities=26%  Similarity=0.326  Sum_probs=51.4

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCc--EEe--eCCCc-cccc-------CCC
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD--LAI--DYTKE-NIED-------LPE  213 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~--~~~--~~~~~-~~~~-------~~~  213 (284)
                      ...++.+++|+|++|.+|..+++.+.. .|++|+++.+++++.+.+.+ ....  .++  |..+. .+..       ...
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAE-AGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFG   85 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            345789999999999999999999888 49999999998776655543 2211  122  22111 1111       124


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|+||.++|
T Consensus        86 ~~d~vi~~ag   95 (264)
T PRK12829         86 GLDVLVNNAG   95 (264)
T ss_pred             CCCEEEECCC
Confidence            7999999876

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.17  E-value=0.034  Score=49.96  Aligned_cols=93  Identities=26%  Similarity=0.266  Sum_probs=64.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC--C--cEEeeCCCc-ccccCCCcccEEEeCCCCc-
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG--A--DLAIDYTKE-NIEDLPEKFDVVFDAVGQC-  225 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g--~--~~~~~~~~~-~~~~~~~~~d~vid~~g~~-  225 (284)
                      ++|||+| +|.+|..+++.+.+.+..+|++++++.++++.+....  .  ...+|-.+. ...+.-+++|+||++...+ 
T Consensus         2 ~~ilviG-aG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~   80 (389)
T COG1748           2 MKILVIG-AGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFV   80 (389)
T ss_pred             CcEEEEC-CchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchh
Confidence            5799999 6999999999977642389999999999999887653  1  223343222 2333356779999998852 


Q ss_pred             --HHHHHhhccCCEEEEEcCCC
Q 023273          226 --DKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       226 --~~~~~~l~~~G~~v~~g~~~  245 (284)
                        ..+-.|++.+=.++.++...
T Consensus        81 ~~~i~ka~i~~gv~yvDts~~~  102 (389)
T COG1748          81 DLTILKACIKTGVDYVDTSYYE  102 (389)
T ss_pred             hHHHHHHHHHhCCCEEEcccCC
Confidence              44445666666666665543

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.17  E-value=0.063  Score=45.88  Aligned_cols=71  Identities=27%  Similarity=0.375  Sum_probs=46.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCc--E--EeeCCCc-ccc----c---CCCcc
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD--L--AIDYTKE-NIE----D---LPEKF  215 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~--~--~~~~~~~-~~~----~---~~~~~  215 (284)
                      ++++|+|++|++|..+++.+... |++|+++.+++++.+..    +..+..  .  ..|-.+. ...    .   ..+++
T Consensus         1 k~vlItGas~giG~~la~~la~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQ-GAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            36899999999999998888774 89999988877665443    223322  1  1232211 111    1   13468


Q ss_pred             cEEEeCCC
Q 023273          216 DVVFDAVG  223 (284)
Q Consensus       216 d~vid~~g  223 (284)
                      |++|+++|
T Consensus        80 d~lv~~ag   87 (272)
T PRK07832         80 DVVMNIAG   87 (272)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.17  E-value=0.026  Score=48.01  Aligned_cols=42  Identities=26%  Similarity=0.461  Sum_probs=36.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|+++++|.+.++..... |++|+++.+++++.+.+
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   48 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEA-GASVAICGRDEERLASA   48 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH
Confidence            5789999999999999999888874 99999999988776544

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=96.16  E-value=0.071  Score=45.28  Aligned_cols=96  Identities=20%  Similarity=0.226  Sum_probs=65.7

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-cEEeeCCCcccccCCCcccEEEeC
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~d~vid~  221 (284)
                      +....+.++++||-+|+  +.|..+..+++...+.+++.++.+++..+.+++... ..++..+...+. ....+|+|+..
T Consensus        24 l~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~  100 (258)
T PRK01683         24 LARVPLENPRYVVDLGC--GPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADIASWQ-PPQALDLIFAN  100 (258)
T ss_pred             HhhCCCcCCCEEEEEcc--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECchhccC-CCCCccEEEEc
Confidence            34556788999999993  456777788876446899999999998888875432 223322222221 23579999865


Q ss_pred             CC-----C----cHHHHHhhccCCEEEEE
Q 023273          222 VG-----Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       222 ~g-----~----~~~~~~~l~~~G~~v~~  241 (284)
                      ..     +    +..+.+.|+++|++++.
T Consensus       101 ~~l~~~~d~~~~l~~~~~~LkpgG~~~~~  129 (258)
T PRK01683        101 ASLQWLPDHLELFPRLVSLLAPGGVLAVQ  129 (258)
T ss_pred             cChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence            43     2    36788899999999875

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.15  E-value=0.016  Score=49.83  Aligned_cols=89  Identities=30%  Similarity=0.402  Sum_probs=69.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC-Cc-EEeeCCCcccccCCCcccEEEeCC---CC--
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG-AD-LAIDYTKENIEDLPEKFDVVFDAV---GQ--  224 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g-~~-~~~~~~~~~~~~~~~~~d~vid~~---g~--  224 (284)
                      .+|.|+| .|.+|.-++.+|.-+ |++|.+++.+.+|++++..+- .. +++-++...+...-...|++|.++   |.  
T Consensus       169 ~kv~iiG-GGvvgtnaAkiA~gl-gA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgaka  246 (371)
T COG0686         169 AKVVVLG-GGVVGTNAAKIAIGL-GADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKA  246 (371)
T ss_pred             ccEEEEC-CccccchHHHHHhcc-CCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCC
Confidence            4567778 799999999999996 999999999999999987543 33 233334444555567899999875   32  


Q ss_pred             ----cHHHHHhhccCCEEEEEc
Q 023273          225 ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ----~~~~~~~l~~~G~~v~~g  242 (284)
                          .+++++.|.+++.+|.+.
T Consensus       247 PkLvt~e~vk~MkpGsVivDVA  268 (371)
T COG0686         247 PKLVTREMVKQMKPGSVIVDVA  268 (371)
T ss_pred             ceehhHHHHHhcCCCcEEEEEE
Confidence                378999999999999983

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.13  E-value=0.035  Score=47.02  Aligned_cols=41  Identities=22%  Similarity=0.256  Sum_probs=33.2

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      +..+.+++|+||+|++|.+.++.+...++++|+++++++++
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~   45 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDP   45 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcch
Confidence            34677999999999999998877555345899999987765

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.11  E-value=0.031  Score=47.14  Aligned_cols=72  Identities=24%  Similarity=0.369  Sum_probs=48.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-EE--eeCCCc-cccc-CCCcccEEEeC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LA--IDYTKE-NIED-LPEKFDVVFDA  221 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~--~~~~~~-~~~~-~~~~~d~vid~  221 (284)
                      +.++||+|++|++|...++.+... |++++++++++++.+.+++    .+.. .+  .|..+. .+.. ...++|++|++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~   80 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARK-GHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN   80 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence            458999999999999999988884 9999999998776555432    2221 11  122211 1211 13489999998


Q ss_pred             CC
Q 023273          222 VG  223 (284)
Q Consensus       222 ~g  223 (284)
                      +|
T Consensus        81 ag   82 (257)
T PRK09291         81 AG   82 (257)
T ss_pred             CC
Confidence            87

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.09  E-value=0.03  Score=48.00  Aligned_cols=73  Identities=26%  Similarity=0.316  Sum_probs=46.1

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHhcCCeEEEEeCChhhHH---HH-HHcCCcEEeeCCCcc---ccc-------CCC
Q 023273          150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTAKLD---LL-RSLGADLAIDYTKEN---IED-------LPE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g--~~G~~a~~~a~~~~g~~vi~~~~~~~~~~---~~-~~~g~~~~~~~~~~~---~~~-------~~~  213 (284)
                      .++++||+|+++  ++|.+.++.+... |++|+++.++++..+   .+ ++.+....+..+-.+   ...       ..+
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQ-GAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhC-CCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            578999999876  9999988888774 999998887653322   22 234432222211111   111       125


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      .+|++++++|
T Consensus        85 ~iD~lVnnAG   94 (271)
T PRK06505         85 KLDFVVHAIG   94 (271)
T ss_pred             CCCEEEECCc
Confidence            7999999876

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=96.09  E-value=0.024  Score=47.53  Aligned_cols=99  Identities=23%  Similarity=0.306  Sum_probs=60.4

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCcccccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~d  216 (284)
                      +....++|++||-++  +++|..+..+++..+ ..+|++++.+++-++.+++    .+..  +.+..+...++-..+.+|
T Consensus        41 ~~~~~~~g~~vLDv~--~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp~~d~sfD  118 (233)
T PF01209_consen   41 KLLGLRPGDRVLDVA--CGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLPFPDNSFD  118 (233)
T ss_dssp             HHHT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB--S-TT-EE
T ss_pred             hccCCCCCCEEEEeC--CChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhcCCCCcee
Confidence            345778999999987  466778888888742 3689999999998887754    2222  222223333333346799


Q ss_pred             EEEeCCC-----C----cHHHHHhhccCCEEEEEcCC
Q 023273          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       217 ~vid~~g-----~----~~~~~~~l~~~G~~v~~g~~  244 (284)
                      +|..+.|     +    ...+.+.|+|+|+++.+...
T Consensus       119 ~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~  155 (233)
T PF01209_consen  119 AVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFS  155 (233)
T ss_dssp             EEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             EEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeecc
Confidence            9998777     1    37899999999999987543

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.08  E-value=0.029  Score=48.45  Aligned_cols=92  Identities=25%  Similarity=0.349  Sum_probs=60.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHH-HcCCcEEeeCCCcccccCCCcccEEEeCCCCc-
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVGQC-  225 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~-  225 (284)
                      ..+.+++|+| +|++|.+++..+... | .+|+++.++.++.+.+. ++.....+.. ..+.......+|+||+|+... 
T Consensus       121 ~~~k~vlVlG-aGg~a~ai~~aL~~~-g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivInaTp~g~  197 (278)
T PRK00258        121 LKGKRILILG-AGGAARAVILPLLDL-GVAEITIVNRTVERAEELAKLFGALGKAEL-DLELQEELADFDLIINATSAGM  197 (278)
T ss_pred             CCCCEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhhhccceee-cccchhccccCCEEEECCcCCC
Confidence            4567899999 699999999988885 7 78999999988876664 3332110111 111122346799999997631 


Q ss_pred             -------HHHHHhhccCCEEEEEcC
Q 023273          226 -------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       226 -------~~~~~~l~~~G~~v~~g~  243 (284)
                             ....+++++...++.+-.
T Consensus       198 ~~~~~~~~~~~~~l~~~~~v~DivY  222 (278)
T PRK00258        198 SGELPLPPLPLSLLRPGTIVYDMIY  222 (278)
T ss_pred             CCCCCCCCCCHHHcCCCCEEEEeec
Confidence                   223467777777776644

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.08  E-value=0.035  Score=46.19  Aligned_cols=42  Identities=21%  Similarity=0.350  Sum_probs=35.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+.+++|+|++|.+|...++.+... |++|+++++++++.+.+
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~-g~~V~~~~r~~~~~~~~   46 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAE-GYKVAITARDQKELEEA   46 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEeeCCHHHHHHH
Confidence            4689999999999999999988874 99999999988776544

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.08  E-value=0.031  Score=47.10  Aligned_cols=73  Identities=23%  Similarity=0.402  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE--Ee--eCCCc-cccc----C---CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL--AI--DYTKE-NIED----L---PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~--~~--~~~~~-~~~~----~---~~~~d~  217 (284)
                      .+.+++|+|++|++|...++.+... |++|+++.++++..+...+.....  .+  |-.+. .+..    .   .+++|+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAK-GARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4779999999999999988888874 999999998876655444433211  22  21111 1111    1   246899


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|.++|
T Consensus        93 vi~~ag   98 (255)
T PRK06841         93 LVNSAG   98 (255)
T ss_pred             EEECCC
Confidence            999887

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.03  Score=47.21  Aligned_cols=41  Identities=24%  Similarity=0.420  Sum_probs=34.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      +++++|+|++|++|...++..... |.+|+++.+++++.+.+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~   41 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEE-GANVVITGRTKEKLEEA   41 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            478999999999999999888884 99999999887766544

>PRK07574 formate dehydrogenase; Provisional

Probab=96.06  E-value=0.074  Score=48.00  Aligned_cols=106  Identities=20%  Similarity=0.224  Sum_probs=71.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-c---
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-C---  225 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~-~---  225 (284)
                      .|.+|.|+| .|.+|...++.++. +|.+|++.++.....+..++.+...     ...+.+..+..|+|+-+... .   
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~-fG~~V~~~dr~~~~~~~~~~~g~~~-----~~~l~ell~~aDvV~l~lPlt~~T~  263 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKP-FDVKLHYTDRHRLPEEVEQELGLTY-----HVSFDSLVSVCDVVTIHCPLHPETE  263 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEECCCCCchhhHhhcCcee-----cCCHHHHhhcCCEEEEcCCCCHHHH
Confidence            578999999 89999999999998 5999999998754444344444321     11234445678999888762 1   


Q ss_pred             ----HHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHHHHHHHHHHCCCee
Q 023273          226 ----DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (284)
Q Consensus       226 ----~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  274 (284)
                          ...+..|+++..+|.++--.            --+-+.+++.+++|+|.
T Consensus       264 ~li~~~~l~~mk~ga~lIN~aRG~------------iVDe~AL~~AL~sG~i~  304 (385)
T PRK07574        264 HLFDADVLSRMKRGSYLVNTARGK------------IVDRDAVVRALESGHLA  304 (385)
T ss_pred             HHhCHHHHhcCCCCcEEEECCCCc------------hhhHHHHHHHHHhCCcc
Confidence                56888899988887665211            12334555666666664

>PRK08017 oxidoreductase; Provisional

Probab=96.05  E-value=0.033  Score=46.91  Aligned_cols=71  Identities=23%  Similarity=0.378  Sum_probs=50.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCCc-cc----ccC----CCcccEEEeC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKE-NI----EDL----PEKFDVVFDA  221 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~-~~----~~~----~~~~d~vid~  221 (284)
                      ++++|+|++|++|...++.+... |.+++++.+++++.+.+++.+...+ .|..+. ..    ...    .+.+|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRR-GYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            57999999999999999998884 8999999999888887776664332 222211 11    111    2467888888


Q ss_pred             CC
Q 023273          222 VG  223 (284)
Q Consensus       222 ~g  223 (284)
                      .|
T Consensus        82 ag   83 (256)
T PRK08017         82 AG   83 (256)
T ss_pred             CC
Confidence            76

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.04  E-value=0.12  Score=43.29  Aligned_cols=101  Identities=22%  Similarity=0.250  Sum_probs=68.1

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHH----HcCCcEEeeCCCcccccC--CCc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR----SLGADLAIDYTKENIEDL--PEK  214 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~--~~~  214 (284)
                      .+...++.||++|+-.|  .+.|.+++.+|+..+. .+++..+..++..+.++    +++....+.....+..+.  .+.
T Consensus        86 I~~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~  163 (256)
T COG2519          86 IVARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEED  163 (256)
T ss_pred             HHHHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccccccccccc
Confidence            33578999999999988  3567788888887644 68999999999887774    344333222211222221  347


Q ss_pred             ccEEEeCCCC----cHHHHHhhccCCEEEEEcCC
Q 023273          215 FDVVFDAVGQ----CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       215 ~d~vid~~g~----~~~~~~~l~~~G~~v~~g~~  244 (284)
                      +|.++==...    .+.+.+.|.++|.++.+..+
T Consensus       164 vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P~  197 (256)
T COG2519         164 VDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSPT  197 (256)
T ss_pred             cCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcCC
Confidence            8976543443    37888999999999987633

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.04  E-value=0.03  Score=46.97  Aligned_cols=42  Identities=21%  Similarity=0.342  Sum_probs=35.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+.+++|+|++|.+|...++.+... |.+|+++++++++.+.+
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~-G~~V~~~~r~~~~~~~~   45 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAE-GARVVVTDRNEEAAERV   45 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4679999999999999988888874 99999999988776554

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=96.03  E-value=0.081  Score=45.21  Aligned_cols=99  Identities=19%  Similarity=0.170  Sum_probs=64.7

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHcC-------Cc--EEeeCCCcccccCCC
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSLG-------AD--LAIDYTKENIEDLPE  213 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~g-------~~--~~~~~~~~~~~~~~~  213 (284)
                      +...+.++++||-+|+  +.|..+..+++..+ ..+++.++.+++-++.+++..       ..  ..+..+...++-..+
T Consensus        67 ~~~~~~~~~~VLDlGc--GtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~lp~~~~  144 (261)
T PLN02233         67 SWSGAKMGDRVLDLCC--GSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDLPFDDC  144 (261)
T ss_pred             HHhCCCCCCEEEEECC--cCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccCCCCCC
Confidence            3456788999999984  34556677777631 258999999999888775321       11  122222222222235


Q ss_pred             cccEEEeCCC-----C----cHHHHHhhccCCEEEEEcCC
Q 023273          214 KFDVVFDAVG-----Q----CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       214 ~~d~vid~~g-----~----~~~~~~~l~~~G~~v~~g~~  244 (284)
                      .+|+|+...+     +    +..+.+.|+++|+++++...
T Consensus       145 sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~  184 (261)
T PLN02233        145 YFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN  184 (261)
T ss_pred             CEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence            6999876543     2    36899999999999887544

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.02  E-value=0.1  Score=42.68  Aligned_cols=73  Identities=21%  Similarity=0.366  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEeeCCCc-cccc--------CCCcccE
Q 023273          150 AGKSILVLGG-AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAIDYTKE-NIED--------LPEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga-~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~~~~~~-~~~~--------~~~~~d~  217 (284)
                      ....|+|+|+ .|++|.+.+.-... .|+.|+++.++-+....+. ++|.. .-+|-..+ ...+        ..+..|+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~-~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFAR-NGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHh-CCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence            4567888876 79999987766666 4999999999988887776 67732 22332221 1111        1456899


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      .++++|
T Consensus        85 L~NNAG   90 (289)
T KOG1209|consen   85 LYNNAG   90 (289)
T ss_pred             EEcCCC
Confidence            998887

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.02  E-value=0.039  Score=46.56  Aligned_cols=42  Identities=31%  Similarity=0.504  Sum_probs=35.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|+++++|...++..... |++|+++.+++++.+.+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~   46 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFARE-GAKVVVGARRQAELDQL   46 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4679999999999999988887774 99999999988776554

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.01  E-value=0.036  Score=48.71  Aligned_cols=42  Identities=19%  Similarity=0.291  Sum_probs=35.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+.+++|+|++|++|..+++..... |.+|+++.+++++.+.+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~   46 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKR-GWHVIMACRNLKKAEAA   46 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5778999999999999988887774 89999999988776544

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.00  E-value=0.042  Score=48.72  Aligned_cols=74  Identities=20%  Similarity=0.318  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcE-Ee--eCCC-cccccC-------CC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-~~--~~~~-~~~~~~-------~~  213 (284)
                      ..+.+++|+|++|++|..+++.+... |++|+++.+++++.+.+    ++.+... .+  |..+ +.....       -+
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~-G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARR-GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            35679999999999999998888774 99999999988776544    2334322 12  2221 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      .+|++|+++|
T Consensus        85 ~iD~lInnAg   94 (334)
T PRK07109         85 PIDTWVNNAM   94 (334)
T ss_pred             CCCEEEECCC
Confidence            7999999987

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.00  E-value=0.038  Score=51.69  Aligned_cols=72  Identities=19%  Similarity=0.288  Sum_probs=53.1

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~  224 (284)
                      +.++++|+|+| .|.+|++++++++.. |++|++.+..+++.+.+++.|... +.... . ......+|+|+.+.|-
T Consensus         9 ~~~~~~v~V~G-~G~sG~aa~~~L~~~-G~~v~~~D~~~~~~~~l~~~g~~~-~~~~~-~-~~~l~~~D~VV~SpGi   80 (488)
T PRK03369          9 LLPGAPVLVAG-AGVTGRAVLAALTRF-GARPTVCDDDPDALRPHAERGVAT-VSTSD-A-VQQIADYALVVTSPGF   80 (488)
T ss_pred             ccCCCeEEEEc-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHhCCCEE-EcCcc-h-HhHhhcCCEEEECCCC
Confidence            45789999999 899999999999985 999999998776666667777633 32211 1 1112468999999884

>PRK08265 short chain dehydrogenase; Provisional

Probab=95.99  E-value=0.038  Score=46.97  Aligned_cols=73  Identities=27%  Similarity=0.323  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCc-EEe--eCCCc-ccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAI--DYTKE-NIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~--~~~~~-~~~~~-------~~~~d~  217 (284)
                      .+++++|+|++|++|...++.+... |++|+++++++++.+.+ ++++.. ..+  |-.+. .+.+.       .+.+|+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAA-GARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4689999999999999999888874 99999999987765544 344422 122  22111 11111       246899


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +++++|
T Consensus        84 lv~~ag   89 (261)
T PRK08265         84 LVNLAC   89 (261)
T ss_pred             EEECCC
Confidence            999877

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.98  E-value=0.039  Score=47.33  Aligned_cols=73  Identities=25%  Similarity=0.466  Sum_probs=47.4

Q ss_pred             CCCCEEEEEcCCchHHHHHH-HHHHHhcCCeEEEEeCChhh----HHHHHHcCCcE--EeeCCC-cccc-------cCCC
Q 023273          149 SAGKSILVLGGAGGVGTMVI-QLAKHVFGASKVAATSSTAK----LDLLRSLGADL--AIDYTK-ENIE-------DLPE  213 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~-~~a~~~~g~~vi~~~~~~~~----~~~~~~~g~~~--~~~~~~-~~~~-------~~~~  213 (284)
                      ..|+.|||+|+++++|++.+ ++|+.  |+++++.+.+++.    .+.+++.|..+  ..|-++ ++..       +.-+
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~r--g~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKR--GAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG  113 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHh--CCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            46999999999999998754 55553  8888888876553    34445555222  223221 1211       1245


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      .+|+++|++|
T Consensus       114 ~V~ILVNNAG  123 (300)
T KOG1201|consen  114 DVDILVNNAG  123 (300)
T ss_pred             CceEEEeccc
Confidence            7999999998

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.97  E-value=0.044  Score=46.43  Aligned_cols=70  Identities=20%  Similarity=0.301  Sum_probs=46.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcEEeeCC--C-ccccc-------CCCcccEE
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYT--K-ENIED-------LPEKFDVV  218 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~--~-~~~~~-------~~~~~d~v  218 (284)
                      +++|+|+++++|.+.++..... |++|+++.+++++.+.+.    +.+....+..+  + +...+       ..+++|++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKK-GARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            7899999999999988887774 999999999877654442    22322222211  1 11111       13579999


Q ss_pred             EeCCC
Q 023273          219 FDAVG  223 (284)
Q Consensus       219 id~~g  223 (284)
                      |+++|
T Consensus        81 i~naG   85 (259)
T PRK08340         81 VWNAG   85 (259)
T ss_pred             EECCC
Confidence            99877

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.95  E-value=0.041  Score=46.10  Aligned_cols=73  Identities=27%  Similarity=0.401  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCc-EEe--eCCC-cccc-------cCCCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAI--DYTK-ENIE-------DLPEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~--~~~~-~~~~-------~~~~~~d~  217 (284)
                      ++++++|+|++|++|...++.+... |++++++.+++++.+.. ++++.. ..+  |..+ ....       +..+++|+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAE-GARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5689999999999999999888874 99999999887766544 344432 122  2111 1111       11346899


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|+++|
T Consensus        84 vi~~ag   89 (249)
T PRK06500         84 VFINAG   89 (249)
T ss_pred             EEECCC
Confidence            999876

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.92  E-value=0.046  Score=46.43  Aligned_cols=38  Identities=24%  Similarity=0.196  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       150 ~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      .+++++|+|++  +++|.++++..... |++|+++.++++.
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~-G~~v~l~~r~~~~   48 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRAL-GAELAVTYLNDKA   48 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCChhh
Confidence            57899999987  49999988887774 8999998887543

>PRK06194 hypothetical protein; Provisional

Probab=95.91  E-value=0.048  Score=46.91  Aligned_cols=42  Identities=29%  Similarity=0.415  Sum_probs=34.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+.++||+|++|++|...++.+... |++|++++++.++.+..
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~   46 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAAL-GMKLVLADVQQDALDRA   46 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEeCChHHHHHH
Confidence            4678999999999999988888774 99999999877665443

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.043  Score=46.48  Aligned_cols=42  Identities=31%  Similarity=0.374  Sum_probs=35.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|+++++|.++++..... |++|+++++++++.+.+
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~-G~~vv~~~r~~~~~~~~   47 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFARE-GAAVALADLDAALAERA   47 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999998888774 99999999987766544

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.05  Score=46.04  Aligned_cols=42  Identities=17%  Similarity=0.278  Sum_probs=35.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~  193 (284)
                      +.+++|+|++|++|...++..... |++++++++++++.+...
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~-G~~v~~~~r~~~~~~~~~   43 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQ-GATLGLVARRTDALQAFA   43 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence            468999999999999988888774 999999999887766543

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.88  E-value=0.049  Score=46.25  Aligned_cols=43  Identities=26%  Similarity=0.463  Sum_probs=36.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~  193 (284)
                      ++.+++|+|++|++|...+..+... |.+|+++++++++.+.+.
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~   46 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAA-GARLLLVGRNAEKLEALA   46 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH
Confidence            4678999999999999988888774 999999999887765553

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.87  E-value=0.054  Score=49.42  Aligned_cols=75  Identities=19%  Similarity=0.300  Sum_probs=52.3

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHH-HcCCcEEeeCCCcccccCCCcccEEEeCCCC
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~  224 (284)
                      +--.+.+++|+| +|++|.+++..+... | .+++++.++.+|.+.+. +++....+..+  ++...-..+|+||+|+++
T Consensus       177 ~~l~~kkvlviG-aG~~a~~va~~L~~~-g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~--~l~~~l~~aDiVI~aT~a  252 (414)
T PRK13940        177 DNISSKNVLIIG-AGQTGELLFRHVTAL-APKQIMLANRTIEKAQKITSAFRNASAHYLS--ELPQLIKKADIIIAAVNV  252 (414)
T ss_pred             cCccCCEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHhcCCeEecHH--HHHHHhccCCEEEECcCC
Confidence            334678999999 799999999888875 6 57888888888765554 45422233221  223334679999999997


Q ss_pred             c
Q 023273          225 C  225 (284)
Q Consensus       225 ~  225 (284)
                      +
T Consensus       253 ~  253 (414)
T PRK13940        253 L  253 (414)
T ss_pred             C
Confidence            4

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.87  E-value=0.052  Score=45.28  Aligned_cols=42  Identities=14%  Similarity=0.179  Sum_probs=35.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+.+++|+|+++++|++.+...... |++|+++.+++++.+.+
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~~   45 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARL-GATLILCDQDQSALKDT   45 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHH
Confidence            4789999999999999988877774 99999999888776544

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.84  E-value=0.048  Score=46.00  Aligned_cols=41  Identities=27%  Similarity=0.410  Sum_probs=35.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL  191 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~  191 (284)
                      .+++++|+|++|.+|...++.+... |++|+++.+++++.+.
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~   49 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQA-GAEVILNGRDPAKLAA   49 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHH
Confidence            5789999999999999999888874 9999999988776543

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.84  E-value=0.061  Score=44.92  Aligned_cols=43  Identities=19%  Similarity=0.259  Sum_probs=35.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      ...++++|+|++|++|...+..+... |.+|+++++++++.+.+
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~   46 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKA-GWDLALVARSQDALEAL   46 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            34678999999999999999888874 89999999987765544

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.83  E-value=0.041  Score=46.54  Aligned_cols=74  Identities=27%  Similarity=0.337  Sum_probs=46.8

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc--EEe--eCCC-ccccc----C---CCc
Q 023273          149 SAGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAI--DYTK-ENIED----L---PEK  214 (284)
Q Consensus       149 ~~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~--~~~--~~~~-~~~~~----~---~~~  214 (284)
                      ..+++++|+|++  +++|.+.++..... |++|+++.++++..+.++++...  ..+  |-.+ +....    .   .+.
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   83 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQ-GATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGK   83 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            357899999988  79999988888774 99999988874433444443221  122  2111 11111    1   246


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++++++|
T Consensus        84 iD~lv~nAg   92 (252)
T PRK06079         84 IDGIVHAIA   92 (252)
T ss_pred             CCEEEEccc
Confidence            899998876

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.82  E-value=0.062  Score=45.05  Aligned_cols=73  Identities=27%  Similarity=0.404  Sum_probs=46.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh--hHHHHHHcCCc-EEe--eCCC-cccc----c---CCCccc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLGAD-LAI--DYTK-ENIE----D---LPEKFD  216 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~--~~~~~~~~g~~-~~~--~~~~-~~~~----~---~~~~~d  216 (284)
                      .+++++|+|++|++|...++.+... |++|+++.+++.  ..+.+++.+.. ..+  |-.+ +.+.    .   ..+++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~-G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEA-GADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999988888874 999999987642  12333444422 122  2111 1111    1   124699


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      ++|+++|
T Consensus        83 ~li~~ag   89 (248)
T TIGR01832        83 ILVNNAG   89 (248)
T ss_pred             EEEECCC
Confidence            9999876

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=95.82  E-value=0.21  Score=41.49  Aligned_cols=98  Identities=26%  Similarity=0.241  Sum_probs=63.4

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHcCC-------cEEeeCCCcccccCCCcc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSLGA-------DLAIDYTKENIEDLPEKF  215 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~~~~~~~  215 (284)
                      ......++.+|+.+| +|. |..+..+++... ..++++++.+++..+.+++.-.       ..++..+........+.+
T Consensus        45 ~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  122 (239)
T PRK00216         45 KWLGVRPGDKVLDLA-CGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDAEALPFPDNSF  122 (239)
T ss_pred             HHhCCCCCCeEEEeC-CCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecccccCCCCCCCc
Confidence            344566788999999 555 778888888731 3899999999888777765321       112222211122223569


Q ss_pred             cEEEeCCC-----C----cHHHHHhhccCCEEEEEcC
Q 023273          216 DVVFDAVG-----Q----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       216 d~vid~~g-----~----~~~~~~~l~~~G~~v~~g~  243 (284)
                      |+|+....     .    +..+.+.|+++|+++++..
T Consensus       123 D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~  159 (239)
T PRK00216        123 DAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEF  159 (239)
T ss_pred             cEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEe
Confidence            98875432     2    2678889999999987754

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.81  E-value=0.044  Score=45.97  Aligned_cols=42  Identities=29%  Similarity=0.387  Sum_probs=35.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+.+++|+|++|.+|...++..... |.+++++.+++++...+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~-g~~vi~~~r~~~~~~~~   46 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALARE-GASVVVADINAEGAERV   46 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5688999999999999999888874 99999999987655433

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.81  E-value=0.062  Score=45.03  Aligned_cols=42  Identities=26%  Similarity=0.385  Sum_probs=35.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      ++++++|+|++|++|..+++.+... |++++++++++++.+..
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~-G~~vi~~~r~~~~~~~~   45 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQK-GAKLALIDLNQEKLEEA   45 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5789999999999999999988884 89999999887665443

>PRK07576 short chain dehydrogenase; Provisional

Probab=95.80  E-value=0.056  Score=46.02  Aligned_cols=42  Identities=33%  Similarity=0.513  Sum_probs=35.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL  191 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~  191 (284)
                      .++.+++|+|++|++|...++.+... |++|+++++++++.+.
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~   48 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARA-GANVAVASRSQEKVDA   48 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence            36789999999999999999888874 9999999988776543

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.80  E-value=0.25  Score=40.64  Aligned_cols=96  Identities=20%  Similarity=0.205  Sum_probs=61.9

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcE--EeeCCC-cccccCCCcc
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL--AIDYTK-ENIEDLPEKF  215 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~-~~~~~~~~~~  215 (284)
                      +...+++++++||-+|+  +.|..+..+++.  ..+++.++.+++..+.+++    .+...  ++..+. ..+. ..+.|
T Consensus        71 ~~~l~~~~~~~VLeiG~--GsG~~t~~la~~--~~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~f  145 (212)
T PRK00312         71 TELLELKPGDRVLEIGT--GSGYQAAVLAHL--VRRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWP-AYAPF  145 (212)
T ss_pred             HHhcCCCCCCEEEEECC--CccHHHHHHHHH--hCEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCC-cCCCc
Confidence            35677889999999983  346666666665  3489999998887766643    33322  222211 1111 12579


Q ss_pred             cEEEeCCC--C-cHHHHHhhccCCEEEEEcC
Q 023273          216 DVVFDAVG--Q-CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       216 d~vid~~g--~-~~~~~~~l~~~G~~v~~g~  243 (284)
                      |+|+....  . +....+.|+++|+++..-.
T Consensus       146 D~I~~~~~~~~~~~~l~~~L~~gG~lv~~~~  176 (212)
T PRK00312        146 DRILVTAAAPEIPRALLEQLKEGGILVAPVG  176 (212)
T ss_pred             CEEEEccCchhhhHHHHHhcCCCcEEEEEEc
Confidence            98876543  2 4778899999999987644

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.80  E-value=0.045  Score=47.19  Aligned_cols=92  Identities=22%  Similarity=0.331  Sum_probs=57.4

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHH-cCCcE-EeeC-CCcccccCCCcccEEEeCCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRS-LGADL-AIDY-TKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~-~g~~~-~~~~-~~~~~~~~~~~~d~vid~~g  223 (284)
                      ..++++++|+| +|+.+.+++..++.. | .+++++.|+.+|.+.+.+ ++... .+.. ...++... ..+|++||++.
T Consensus       123 ~~~~~~vlilG-AGGAarAv~~aL~~~-g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~-~~~dliINaTp  199 (283)
T COG0169         123 DVTGKRVLILG-AGGAARAVAFALAEA-GAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGL-EEADLLINATP  199 (283)
T ss_pred             ccCCCEEEEEC-CcHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccccc-cccCEEEECCC
Confidence            34689999999 799999988888885 6 689999999988776653 33211 0011 00111111 15999999976


Q ss_pred             C---cH-----HHHHhhccCCEEEEEc
Q 023273          224 Q---CD-----KALKAVKEGGRVVSII  242 (284)
Q Consensus       224 ~---~~-----~~~~~l~~~G~~v~~g  242 (284)
                      .   ..     ....++++.-.+..+-
T Consensus       200 ~Gm~~~~~~~~~~~~~l~~~~~v~D~v  226 (283)
T COG0169         200 VGMAGPEGDSPVPAELLPKGAIVYDVV  226 (283)
T ss_pred             CCCCCCCCCCCCcHHhcCcCCEEEEec
Confidence            2   11     1145666666665553

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.049  Score=47.49  Aligned_cols=41  Identities=24%  Similarity=0.261  Sum_probs=34.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL  191 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~  191 (284)
                      .+++++|+|++|++|..+++..... |.+++++.++.++.+.
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~-G~~vi~~~r~~~~~~~   55 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAK-GAHVVLAVRNLDKGKA   55 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence            6789999999999999988877774 8999999988776543

>PRK12939 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.057  Score=45.20  Aligned_cols=43  Identities=30%  Similarity=0.356  Sum_probs=35.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .++.+++|+|++|++|...+...... |++++++.+++++....
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~   47 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEA-GATVAFNDGLAAEAREL   47 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            35789999999999999999888874 99999998887765543

>PRK08589 short chain dehydrogenase; Validated

Probab=95.75  E-value=0.053  Score=46.41  Aligned_cols=36  Identities=19%  Similarity=0.278  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      .++++||+|+++++|.+.++..... |++|+++.+++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~-G~~vi~~~r~~   40 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQE-GAYVLAVDIAE   40 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCcH
Confidence            5789999999999999988887774 99999999883

>PRK05717 oxidoreductase; Validated

Probab=95.75  E-value=0.058  Score=45.56  Aligned_cols=73  Identities=21%  Similarity=0.303  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCc-EEe--eCCC-ccc----ccC---CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAI--DYTK-ENI----EDL---PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~--~~~~-~~~----~~~---~~~~d~  217 (284)
                      .|++++|+|++|.+|...+...... |++|++++++.++.... ++++.. ..+  |-.+ +..    .+.   .+.+|+
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAE-GWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4789999999999999988888774 89999998876655443 334422 112  2111 111    111   236899


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|.++|
T Consensus        88 li~~ag   93 (255)
T PRK05717         88 LVCNAA   93 (255)
T ss_pred             EEECCC
Confidence            999876

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.75  E-value=0.053  Score=45.80  Aligned_cols=73  Identities=22%  Similarity=0.299  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH---cCCc-EEee--CCC-cccccC-------CCcc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS---LGAD-LAID--YTK-ENIEDL-------PEKF  215 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~---~g~~-~~~~--~~~-~~~~~~-------~~~~  215 (284)
                      .+.+++|+|++|++|...++..... |++++++.+++++.+..++   .+.. ..+.  ..+ +.....       .+++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEE-GAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc-CCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4679999999999999988887774 8999999887776543333   3322 1222  111 111111       2478


Q ss_pred             cEEEeCCC
Q 023273          216 DVVFDAVG  223 (284)
Q Consensus       216 d~vid~~g  223 (284)
                      |++|.++|
T Consensus        85 d~vi~~ag   92 (258)
T PRK08628         85 DGLVNNAG   92 (258)
T ss_pred             CEEEECCc
Confidence            99999987

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.74  E-value=0.062  Score=46.18  Aligned_cols=93  Identities=20%  Similarity=0.294  Sum_probs=59.2

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCChh---hHHHH-HHcCCcEEe--eCCCc-cccc-------CCC
Q 023273          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTA---KLDLL-RSLGADLAI--DYTKE-NIED-------LPE  213 (284)
Q Consensus       150 ~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~~---~~~~~-~~~g~~~~~--~~~~~-~~~~-------~~~  213 (284)
                      .+++++|+|++  +++|+++++..... |++|+++.++++   +.+.+ ++++....+  |-.+. ....       ..+
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g   82 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQ-GAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG   82 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            47899999986  79999988887774 999999888743   33333 334432222  22111 1111       135


Q ss_pred             cccEEEeCCCC--------c------------------------HHHHHhhccCCEEEEEcC
Q 023273          214 KFDVVFDAVGQ--------C------------------------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       214 ~~d~vid~~g~--------~------------------------~~~~~~l~~~G~~v~~g~  243 (284)
                      .+|++++++|.        +                        +.++..|.++|+++.++.
T Consensus        83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS  144 (274)
T PRK08415         83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSY  144 (274)
T ss_pred             CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEec
Confidence            78999998762        0                        235566777899998754

>PRK08643 acetoin reductase; Validated

Probab=95.71  E-value=0.06  Score=45.44  Aligned_cols=41  Identities=17%  Similarity=0.185  Sum_probs=34.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      +++++|+|++|++|...++.+... |++|+++++++++.+.+
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~-G~~v~~~~r~~~~~~~~   42 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVED-GFKVAIVDYNEETAQAA   42 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            568999999999999999888874 99999999887765444

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.069  Score=45.19  Aligned_cols=42  Identities=24%  Similarity=0.403  Sum_probs=35.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|+++++|...++..... |++|+++.+++++.+.+
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   47 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAE-GCHLHLVARDADALEAL   47 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999988888774 89999999987766543

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.066  Score=45.97  Aligned_cols=43  Identities=23%  Similarity=0.299  Sum_probs=35.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      -.+++++|+|++|++|.+.++.+... |++|+++++++++.+.+
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~-G~~Vv~~~r~~~~l~~~   46 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARR-GARVVLGDVDKPGLRQA   46 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            35789999999999999988888774 99999999887765543

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.02  Score=48.84  Aligned_cols=71  Identities=21%  Similarity=0.407  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE-EeeCCC-ccccc-------CCCcccEEEe
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL-AIDYTK-ENIED-------LPEKFDVVFD  220 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~-~~~~~~-~~~~~-------~~~~~d~vid  220 (284)
                      .+++++|+|++|++|...++.+... |++|+++++++++.+...  +... ..|..+ +.+..       ..+.+|++|+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARA-GYRVFGTSRNPARAAPIP--GVELLELDVTDDASVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCChhhccccC--CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            3568999999999999988887774 999999998766543221  1111 122211 11111       1346899999


Q ss_pred             CCC
Q 023273          221 AVG  223 (284)
Q Consensus       221 ~~g  223 (284)
                      ++|
T Consensus        80 ~ag   82 (270)
T PRK06179         80 NAG   82 (270)
T ss_pred             CCC
Confidence            987

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.069  Score=44.78  Aligned_cols=41  Identities=22%  Similarity=0.344  Sum_probs=34.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      +.+++|+|++|++|...++..... |++++++++++++.+.+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~-g~~v~~~~r~~~~~~~~   42 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAK-GRDLALCARRTDRLEEL   42 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            468999999999999988877774 89999999988776554

>PRK12828 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.033  Score=46.26  Aligned_cols=39  Identities=28%  Similarity=0.416  Sum_probs=33.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL  189 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~  189 (284)
                      ++++++|+|++|.+|..+++.+... |++|+++++++++.
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~-G~~v~~~~r~~~~~   44 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAAR-GARVALIGRGAAPL   44 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHC-CCeEEEEeCChHhH
Confidence            4789999999999999999888874 99999999976654

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.69  E-value=0.063  Score=45.19  Aligned_cols=42  Identities=24%  Similarity=0.419  Sum_probs=35.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+.+++|+|++|++|.+.++.+... |.+|+++++++++.+.+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~-G~~Vi~~~r~~~~~~~~   48 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQ-GAHVIVSSRKLDGCQAV   48 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4678999999999999999988884 99999999887765444

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.68  E-value=0.07  Score=44.43  Aligned_cols=71  Identities=18%  Similarity=0.297  Sum_probs=46.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh-HHHHHHcCCcEEe--eCCC-ccccc-------CCCcccEEE
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGADLAI--DYTK-ENIED-------LPEKFDVVF  219 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~-~~~~~~~g~~~~~--~~~~-~~~~~-------~~~~~d~vi  219 (284)
                      +++++|+|+++++|...++..... |++|+++++++++ .+.+++.+.. .+  |-.+ +....       ..+++|+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~lv   79 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQ-GQPVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQHTDGLRAII   79 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhhCCCccEEE
Confidence            468999999999999999887774 9999999886653 2333444422 22  2111 11111       124689999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +++|
T Consensus        80 ~~ag   83 (236)
T PRK06483         80 HNAS   83 (236)
T ss_pred             ECCc
Confidence            9887

>PRK04266 fibrillarin; Provisional

Probab=95.68  E-value=0.18  Score=42.15  Aligned_cols=126  Identities=20%  Similarity=0.210  Sum_probs=70.7

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcEEeeCCCcc---cccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKEN---IEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~---~~~~~~~~d  216 (284)
                      +..++++|++|+-+|+  +.|..+..+++.....+|++++.+++.++.+.+    ......+..+...   .....+.+|
T Consensus        66 ~~l~i~~g~~VlD~G~--G~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~~~~~l~~~~D  143 (226)
T PRK04266         66 KNFPIKKGSKVLYLGA--ASGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPERYAHVVEKVD  143 (226)
T ss_pred             hhCCCCCCCEEEEEcc--CCCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcchhhhccccCC
Confidence            3578899999999984  334456666665423589999999976664432    2111222211111   112234699


Q ss_pred             EEEeCCCC-------cHHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHHHHHHHHHHCCCeeE
Q 023273          217 VVFDAVGQ-------CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA  275 (284)
Q Consensus       217 ~vid~~g~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~  275 (284)
                      +++.....       .+.+.+.|+++|+++++ .+..  ..++.. ...+.+++.++++++..++.
T Consensus       144 ~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~-v~~~--~~d~~~-~~~~~~~~~~~~l~~aGF~~  205 (226)
T PRK04266        144 VIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA-IKAR--SIDVTK-DPKEIFKEEIRKLEEGGFEI  205 (226)
T ss_pred             EEEECCCChhHHHHHHHHHHHhcCCCcEEEEE-Eecc--cccCcC-CHHHHHHHHHHHHHHcCCeE
Confidence            99854432       25677799999999984 2211  111111 11233455567776544544

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.67  E-value=0.12  Score=42.77  Aligned_cols=91  Identities=18%  Similarity=0.133  Sum_probs=60.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCc-----------------EEeeCCCccccc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-----------------LAIDYTKENIED  210 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-----------------~~~~~~~~~~~~  210 (284)
                      .++.+||+.|  .+.|.-++.+|..  |.+|+.++.++.-++.+ ++.+..                 .++..+-..+..
T Consensus        33 ~~~~rvLd~G--CG~G~da~~LA~~--G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  108 (213)
T TIGR03840        33 PAGARVFVPL--CGKSLDLAWLAEQ--GHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA  108 (213)
T ss_pred             CCCCeEEEeC--CCchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence            5778999998  3678889999874  99999999999987765 333211                 001111111111


Q ss_pred             -CCCcccEEEeCCC--C---------cHHHHHhhccCCEEEEEcC
Q 023273          211 -LPEKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       211 -~~~~~d~vid~~g--~---------~~~~~~~l~~~G~~v~~g~  243 (284)
                       ..+.+|.++|+..  .         ...+.++|+++|++++.+.
T Consensus       109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence             1246899999753  1         2578999999998766644

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.66  E-value=0.07  Score=44.98  Aligned_cols=43  Identities=30%  Similarity=0.421  Sum_probs=36.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      ..+.+++|+|++|++|...+..+... |++|+++++++++.+.+
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~   45 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARA-GADVVLAARTAERLDEV   45 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            45789999999999999998888874 99999999987765544

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.65  E-value=0.047  Score=47.21  Aligned_cols=73  Identities=19%  Similarity=0.169  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHH-HcCCc-EEeeCCC-cccccCCCcccEEEeCCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLR-SLGAD-LAIDYTK-ENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~-~~g~~-~~~~~~~-~~~~~~~~~~d~vid~~g~  224 (284)
                      .+.+++|+| +|+.+.+++..+..+ |+ +++++.++.+|.+.+. +++.. .+..... +........+|+||+|+..
T Consensus       124 ~~k~vlvlG-aGGaarai~~aL~~~-G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~  200 (282)
T TIGR01809       124 AGFRGLVIG-AGGTSRAAVYALASL-GVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPA  200 (282)
T ss_pred             CCceEEEEc-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCC
Confidence            578999999 799999988888775 65 7889999988876664 33321 1111110 1122223579999999863

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.64  E-value=0.064  Score=45.42  Aligned_cols=71  Identities=30%  Similarity=0.425  Sum_probs=48.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cC-C-cEE--eeCCC-ccccc----C----CCcccE
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LG-A-DLA--IDYTK-ENIED----L----PEKFDV  217 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g-~-~~~--~~~~~-~~~~~----~----~~~~d~  217 (284)
                      ++++|+|++|++|...++.+... |.+|+++++++++.+.+.+ .+ . ..+  .|-.+ +.+.+    .    .+.+|+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAE-GWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            47999999999999998887774 9999999998887766643 22 1 112  22221 11111    1    346899


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      ++.++|
T Consensus        81 vi~~ag   86 (260)
T PRK08267         81 LFNNAG   86 (260)
T ss_pred             EEECCC
Confidence            999987

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=95.63  E-value=0.032  Score=50.76  Aligned_cols=73  Identities=26%  Similarity=0.377  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCC-cEEe--eCCC-cccccCCCcccEEEeCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGA-DLAI--DYTK-ENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~-~~~~--~~~~-~~~~~~~~~~d~vid~~g  223 (284)
                      .+++++|+||+|++|.+.++..... |.+|+++++++++.+... +... ...+  |-.+ +...+.-+++|++|+++|
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~-G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAG  254 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQ-GAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHG  254 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCC
Confidence            4789999999999999988877774 999999998776654322 1111 1122  2211 122223457999998876

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=95.61  E-value=0.17  Score=42.17  Aligned_cols=98  Identities=24%  Similarity=0.241  Sum_probs=63.3

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHc----CCc--EEeeCCCcccccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL----GAD--LAIDYTKENIEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~----g~~--~~~~~~~~~~~~~~~~~d  216 (284)
                      ....++++++||-+|+  +.|..+..+++..+ +.+++.++.+++..+.+++.    +..  .++..+...+.-..+.+|
T Consensus        39 ~~l~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD  116 (231)
T TIGR02752        39 KRMNVQAGTSALDVCC--GTADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNAMELPFDDNSFD  116 (231)
T ss_pred             HhcCCCCCCEEEEeCC--CcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEechhcCCCCCCCcc
Confidence            4567788999999984  45667777777632 46899999998887766532    222  222222222221235799


Q ss_pred             EEEeCCC-----C----cHHHHHhhccCCEEEEEcC
Q 023273          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       217 ~vid~~g-----~----~~~~~~~l~~~G~~v~~g~  243 (284)
                      +|+.+..     .    ++.+.+.|+++|+++....
T Consensus       117 ~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  152 (231)
T TIGR02752       117 YVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET  152 (231)
T ss_pred             EEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence            9876432     1    2567889999999987643

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.61  E-value=0.068  Score=45.76  Aligned_cols=42  Identities=21%  Similarity=0.358  Sum_probs=35.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|++|++|.+.+..+... |++|+++++++++.+.+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   50 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARA-GAKVAILDRNQEKAEAV   50 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5789999999999999999888774 99999999887655433

>PRK08263 short chain dehydrogenase; Provisional

Probab=95.60  E-value=0.076  Score=45.46  Aligned_cols=72  Identities=24%  Similarity=0.310  Sum_probs=48.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCc-EEeeCCCc---cccc-------CCCcccEE
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-LAIDYTKE---NIED-------LPEKFDVV  218 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~-~~~~~~~~---~~~~-------~~~~~d~v  218 (284)
                      +.+++|+|++|++|..+++.+... |.+|+++++++++.+.+.+ .+.. ..+..+-.   .+..       ..+++|++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALER-GDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            568999999999999988888774 8999999998877665543 2211 12221111   1111       12478999


Q ss_pred             EeCCC
Q 023273          219 FDAVG  223 (284)
Q Consensus       219 id~~g  223 (284)
                      |.++|
T Consensus        82 i~~ag   86 (275)
T PRK08263         82 VNNAG   86 (275)
T ss_pred             EECCC
Confidence            99987

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.59  E-value=0.079  Score=44.67  Aligned_cols=42  Identities=29%  Similarity=0.468  Sum_probs=35.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .++++||+|++|++|.+.++..... |++++++++++++.+.+
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~-G~~vvl~~r~~~~~~~~   49 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEY-GAEIIINDITAERAELA   49 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcCCHHHHHHH
Confidence            5779999999999999998888874 99999999887765443

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=95.59  E-value=0.075  Score=44.68  Aligned_cols=71  Identities=24%  Similarity=0.389  Sum_probs=48.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCc-EEe--eCCC-ccccc-------CCCcccEEE
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-LAI--DYTK-ENIED-------LPEKFDVVF  219 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~-~~~--~~~~-~~~~~-------~~~~~d~vi  219 (284)
                      ++++|+|++|++|.+.++.+... |++|+++++++++.+.+.. ++.. ..+  |-.+ +.+.+       ..+++|+++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi   79 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLV   79 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            36899999999999999988884 9999999998887765543 3322 122  2111 11111       124799999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      .++|
T Consensus        80 ~~ag   83 (248)
T PRK10538         80 NNAG   83 (248)
T ss_pred             ECCC
Confidence            8876

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=95.59  E-value=0.11  Score=45.96  Aligned_cols=93  Identities=18%  Similarity=0.184  Sum_probs=60.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC---cEEeeCCCcccccCCCcccEEEeCCC--
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA---DLAIDYTKENIEDLPEKFDVVFDAVG--  223 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~d~vid~~g--  223 (284)
                      .++.+||-+| +|. |..+..+++...+.+++.++.+++-.+.+++...   ..++..+.....-..+.+|+|+.+..  
T Consensus       112 ~~~~~VLDLG-cGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~gD~e~lp~~~~sFDvVIs~~~L~  189 (340)
T PLN02490        112 DRNLKVVDVG-GGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFPTDYADRYVSAGSIE  189 (340)
T ss_pred             CCCCEEEEEe-cCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEeccHHhCCCCCCceeEEEEcChhh
Confidence            4688999998 444 7677777776445789999999887777765321   11222211111112346999887532  


Q ss_pred             ---C----cHHHHHhhccCCEEEEEcC
Q 023273          224 ---Q----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       224 ---~----~~~~~~~l~~~G~~v~~g~  243 (284)
                         +    ++.+.+.|+++|++++++.
T Consensus       190 ~~~d~~~~L~e~~rvLkPGG~LvIi~~  216 (340)
T PLN02490        190 YWPDPQRGIKEAYRVLKIGGKACLIGP  216 (340)
T ss_pred             hCCCHHHHHHHHHHhcCCCcEEEEEEe
Confidence               1    2678899999999987753

>PLN02253 xanthoxin dehydrogenase

Probab=95.59  E-value=0.066  Score=45.90  Aligned_cols=42  Identities=29%  Similarity=0.386  Sum_probs=34.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|++|++|.+.++..... |++|+++++++++.+.+
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~-G~~v~~~~~~~~~~~~~   58 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKH-GAKVCIVDLQDDLGQNV   58 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999988877774 99999998876655443

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.58  E-value=0.072  Score=45.00  Aligned_cols=42  Identities=24%  Similarity=0.355  Sum_probs=35.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+.+++|+|++|.+|..+++.+... |.+|+++.+++++.+.+
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~   47 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARA-GAAVAIADLNQDGANAV   47 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHH
Confidence            4789999999999999998888874 99999999987665443

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.58  E-value=0.074  Score=45.21  Aligned_cols=37  Identities=32%  Similarity=0.271  Sum_probs=29.7

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          149 SAGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       149 ~~g~~vlI~ga~g--~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      ..+++++|+|+++  ++|.+.++.+... |++|++..+++
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~-G~~v~~~~r~~   44 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKH-GAELWFTYQSE   44 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHc-CCEEEEEeCch
Confidence            4578999999886  8999988777663 89998887764

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=95.58  E-value=0.21  Score=42.73  Aligned_cols=99  Identities=13%  Similarity=0.172  Sum_probs=65.2

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC--cE--EeeCCCcccccCCCcccE
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA--DL--AIDYTKENIEDLPEKFDV  217 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~--~~--~~~~~~~~~~~~~~~~d~  217 (284)
                      ++...++.++.+||-+| +| .|..+..+++. .+++++.++.+++..+.+++...  ..  +...+....+-..+.||+
T Consensus        44 ~l~~l~l~~~~~VLDiG-cG-~G~~a~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~  120 (263)
T PTZ00098         44 ILSDIELNENSKVLDIG-SG-LGGGCKYINEK-YGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDM  120 (263)
T ss_pred             HHHhCCCCCCCEEEEEc-CC-CChhhHHHHhh-cCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEE
Confidence            44667889999999998 44 46566777776 48899999999988887765321  11  111111111111356999


Q ss_pred             EEeCC-----C--C----cHHHHHhhccCCEEEEEcC
Q 023273          218 VFDAV-----G--Q----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       218 vid~~-----g--~----~~~~~~~l~~~G~~v~~g~  243 (284)
                      |+...     .  .    ++.+.+.|+|+|++++...
T Consensus       121 V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        121 IYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             EEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            98631     1  1    2577899999999998754

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.58  E-value=0.059  Score=45.56  Aligned_cols=73  Identities=29%  Similarity=0.364  Sum_probs=46.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH---cCCcE-E--eeCCCc-cccc-------CCCcc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS---LGADL-A--IDYTKE-NIED-------LPEKF  215 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~---~g~~~-~--~~~~~~-~~~~-------~~~~~  215 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++...+..++   .+.+. .  .|..+. ....       ..+.+
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAE-GARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999988888774 9999999887543333222   23221 1  222211 1111       12479


Q ss_pred             cEEEeCCC
Q 023273          216 DVVFDAVG  223 (284)
Q Consensus       216 d~vid~~g  223 (284)
                      |++++++|
T Consensus        86 d~lv~nAg   93 (260)
T PRK12823         86 DVLINNVG   93 (260)
T ss_pred             eEEEECCc
Confidence            99999886

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.57  E-value=0.075  Score=44.96  Aligned_cols=42  Identities=29%  Similarity=0.478  Sum_probs=36.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+.+++|+|++|++|...++..... |++|++++++.++.+..
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~   52 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEA-GARVVLSARKAEELEEA   52 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            5789999999999999999888874 99999999987766544

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.56  E-value=0.062  Score=44.59  Aligned_cols=70  Identities=20%  Similarity=0.385  Sum_probs=46.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEE-eeCCC-ccccc----CCCcccEEEeCCC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLA-IDYTK-ENIED----LPEKFDVVFDAVG  223 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~-~~~~~-~~~~~----~~~~~d~vid~~g  223 (284)
                      +++|+|++|++|.+.++..... |++++++.+++++.+.+. +.+...+ .|-.+ +.+.+    ..+.+|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRND-GHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence            5899999999999998888774 999999999888776553 3333211 22211 11111    1236898888754

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=95.56  E-value=0.073  Score=44.01  Aligned_cols=95  Identities=22%  Similarity=0.307  Sum_probs=67.3

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCcE-E--eeC-C-Cccccc-CCC
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADL-A--IDY-T-KENIED-LPE  213 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~-~--~~~-~-~~~~~~-~~~  213 (284)
                      ..+.+..+++|-+|  +.+|+.++.+|..+. ..+++.++.++++.+.+++    .|... +  +.. + .+.+.+ ..+
T Consensus        54 L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~  131 (219)
T COG4122          54 LARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDG  131 (219)
T ss_pred             HHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCC
Confidence            45566889999998  678999999999875 4689999999999888864    45433 2  221 1 111222 256


Q ss_pred             cccEE-EeCCCC-----cHHHHHhhccCCEEEEE
Q 023273          214 KFDVV-FDAVGQ-----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       214 ~~d~v-id~~g~-----~~~~~~~l~~~G~~v~~  241 (284)
                      .||+| ||+.-.     ++.++++|+++|.++.=
T Consensus       132 ~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D  165 (219)
T COG4122         132 SFDLVFIDADKADYPEYLERALPLLRPGGLIVAD  165 (219)
T ss_pred             CccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence            89986 576542     38999999999999854

>PRK08264 short chain dehydrogenase; Validated

Probab=95.56  E-value=0.062  Score=44.75  Aligned_cols=71  Identities=23%  Similarity=0.393  Sum_probs=47.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCc-EEe--eCCC-cccccC---CCcccEEEeC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD-LAI--DYTK-ENIEDL---PEKFDVVFDA  221 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~-~~~--~~~~-~~~~~~---~~~~d~vid~  221 (284)
                      .+.+++|+|++|.+|...++.+... |. +|+++++++++.+.   .+.. .++  |..+ +.+...   .+.+|++|.+
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~-G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   80 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLAR-GAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN   80 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            5678999999999999999888874 88 99999988766543   2211 122  2211 111111   2358999998


Q ss_pred             CCC
Q 023273          222 VGQ  224 (284)
Q Consensus       222 ~g~  224 (284)
                      +|.
T Consensus        81 ag~   83 (238)
T PRK08264         81 AGI   83 (238)
T ss_pred             CCc
Confidence            764

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.55  E-value=0.074  Score=45.61  Aligned_cols=76  Identities=26%  Similarity=0.316  Sum_probs=46.7

Q ss_pred             ccCCCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCCh---hhHHHH-HHcCCcEEeeCCCcc---ccc-------
Q 023273          147 AFSAGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSST---AKLDLL-RSLGADLAIDYTKEN---IED-------  210 (284)
Q Consensus       147 ~~~~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~---~~~~~~-~~~g~~~~~~~~~~~---~~~-------  210 (284)
                      +...+++++|+|++  +++|++.++..... |++|+++.+++   ++.+.+ ++++....+..+-.+   ...       
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~-G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAA-GAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHH
Confidence            34567899999986  79999988887774 99998877653   333333 234432222211111   111       


Q ss_pred             CCCcccEEEeCCC
Q 023273          211 LPEKFDVVFDAVG  223 (284)
Q Consensus       211 ~~~~~d~vid~~g  223 (284)
                      .-+.+|++++++|
T Consensus        85 ~~g~iD~lv~nAG   97 (272)
T PRK08159         85 KWGKLDFVVHAIG   97 (272)
T ss_pred             hcCCCcEEEECCc
Confidence            1246899998875

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.077  Score=44.66  Aligned_cols=41  Identities=34%  Similarity=0.409  Sum_probs=34.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL  191 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~  191 (284)
                      .+++++|+|++|++|...+..+... |++|+++.+++++.+.
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~   46 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFARE-GAKVVVADRDAAGGEE   46 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHH
Confidence            4789999999999999988877774 8999999998776543

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.52  E-value=0.072  Score=45.32  Aligned_cols=37  Identities=19%  Similarity=0.222  Sum_probs=29.5

Q ss_pred             CCCCEEEEEcC--CchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          149 SAGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       149 ~~g~~vlI~ga--~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      ..+++++|+|+  ++++|.+.++..... |++|++..+.+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~-G~~v~~~~~~~   42 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQ-GAELAFTYVVD   42 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCcH
Confidence            35789999996  679999988887774 99998876654

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.52  E-value=0.075  Score=44.91  Aligned_cols=41  Identities=17%  Similarity=0.253  Sum_probs=34.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      +++++|+|++|.+|...+...... |+++++++++.++.+..
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~-g~~vi~~~r~~~~~~~~   42 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEE-GYRVAVADINSEKAANV   42 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            568999999999999998888874 99999999877655433

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.52  E-value=0.078  Score=45.30  Aligned_cols=42  Identities=26%  Similarity=0.351  Sum_probs=35.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      ++++++|+|++|.+|...++.+... |++|+++.+++++.+..
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~   47 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAA-GAAVMIVGRNPDKLAAA   47 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH
Confidence            4789999999999999999988884 99999999887665433

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.50  E-value=0.097  Score=42.90  Aligned_cols=89  Identities=16%  Similarity=0.109  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh-hHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc--H
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC--D  226 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~--~  226 (284)
                      .|.+|+|+| +|.+|...+...... |++|+++..... .+..+.+.+.- .+...... ...-.++|+||-++++.  +
T Consensus         9 ~~k~vLVIG-gG~va~~ka~~Ll~~-ga~V~VIs~~~~~~l~~l~~~~~i-~~~~~~~~-~~~l~~adlViaaT~d~elN   84 (202)
T PRK06718          9 SNKRVVIVG-GGKVAGRRAITLLKY-GAHIVVISPELTENLVKLVEEGKI-RWKQKEFE-PSDIVDAFLVIAATNDPRVN   84 (202)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEcCCCCHHHHHHHhCCCE-EEEecCCC-hhhcCCceEEEEcCCCHHHH
Confidence            578999999 799999888877774 888888865321 22222222211 11111111 11135799999999873  4


Q ss_pred             HHHHhhccCCEEEEEc
Q 023273          227 KALKAVKEGGRVVSII  242 (284)
Q Consensus       227 ~~~~~l~~~G~~v~~g  242 (284)
                      ..+...+..+.++.+.
T Consensus        85 ~~i~~~a~~~~lvn~~  100 (202)
T PRK06718         85 EQVKEDLPENALFNVI  100 (202)
T ss_pred             HHHHHHHHhCCcEEEC
Confidence            4444444445555553

>PLN00203 glutamyl-tRNA reductase

Probab=95.50  E-value=0.22  Score=46.80  Aligned_cols=92  Identities=22%  Similarity=0.338  Sum_probs=60.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHH-HcC-Cc-EEeeCCCcccccCCCcccEEEeCCCCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLR-SLG-AD-LAIDYTKENIEDLPEKFDVVFDAVGQC  225 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~-~~g-~~-~~~~~~~~~~~~~~~~~d~vid~~g~~  225 (284)
                      .+.+|+|+| +|.+|.+++..+... |. +++++.++.++.+.+. +++ .. .+...  ++......+.|+||.|+++.
T Consensus       265 ~~kkVlVIG-AG~mG~~~a~~L~~~-G~~~V~V~nRs~era~~La~~~~g~~i~~~~~--~dl~~al~~aDVVIsAT~s~  340 (519)
T PLN00203        265 ASARVLVIG-AGKMGKLLVKHLVSK-GCTKMVVVNRSEERVAALREEFPDVEIIYKPL--DEMLACAAEADVVFTSTSSE  340 (519)
T ss_pred             CCCEEEEEe-CHHHHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHhCCCceEeecH--hhHHHHHhcCCEEEEccCCC
Confidence            368999999 799999999988885 75 7889999988876665 443 21 11111  12223346799999998752


Q ss_pred             -----HHHHHhhcc----CC---EEEEEcCCC
Q 023273          226 -----DKALKAVKE----GG---RVVSIIGSV  245 (284)
Q Consensus       226 -----~~~~~~l~~----~G---~~v~~g~~~  245 (284)
                           ...++.+.+    .|   .++.++.|.
T Consensus       341 ~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPR  372 (519)
T PLN00203        341 TPLFLKEHVEALPPASDTVGGKRLFVDISVPR  372 (519)
T ss_pred             CCeeCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence                 444444422    12   366667664

>PRK06720 hypothetical protein; Provisional

Probab=95.49  E-value=0.12  Score=41.14  Aligned_cols=40  Identities=28%  Similarity=0.368  Sum_probs=33.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD  190 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~  190 (284)
                      .+..++|+|+++++|...+...... |.+++++++++++.+
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~-G~~V~l~~r~~~~~~   54 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQ-GAKVIVTDIDQESGQ   54 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEECCHHHHH
Confidence            5789999999999999988877774 899999998766543

>PRK12937 short chain dehydrogenase; Provisional

Probab=95.46  E-value=0.21  Score=41.58  Aligned_cols=36  Identities=17%  Similarity=0.300  Sum_probs=30.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      ++.+++|+|++|++|...++..... |.+++++.++.
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~-g~~v~~~~~~~   39 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAAD-GFAVAVNYAGS   39 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCCC
Confidence            5689999999999999999888874 88888776643

>PRK09242 tropinone reductase; Provisional

Probab=95.45  E-value=0.095  Score=44.24  Aligned_cols=42  Identities=19%  Similarity=0.345  Sum_probs=35.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|++|++|...+..+... |++++++.+++++.+..
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~   49 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGL-GADVLIVARDADALAQA   49 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999999888874 99999999987766544

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.45  E-value=0.075  Score=44.88  Aligned_cols=43  Identities=33%  Similarity=0.382  Sum_probs=36.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~  193 (284)
                      .+.+++|+|++|++|...++.+... |.+|++++++.++.+.+.
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~   47 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAE-GARVVIADIKPARARLAA   47 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHH
Confidence            4678999999999999999888874 999999999887765554

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.45  E-value=0.12  Score=45.40  Aligned_cols=85  Identities=18%  Similarity=0.270  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-c--
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-C--  225 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~-~--  225 (284)
                      ..|.+|.|+| .|.+|...++.++. +|.+|++.++..++..     +.....  ....+.+.....|+|+.+... .  
T Consensus       134 l~g~tvgIvG-~G~IG~~vA~~l~a-fG~~V~~~~~~~~~~~-----~~~~~~--~~~~l~e~l~~aDvvv~~lPlt~~T  204 (312)
T PRK15469        134 REDFTIGILG-AGVLGSKVAQSLQT-WGFPLRCWSRSRKSWP-----GVQSFA--GREELSAFLSQTRVLINLLPNTPET  204 (312)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEeCCCCCCC-----Cceeec--ccccHHHHHhcCCEEEECCCCCHHH
Confidence            3678999999 99999999999998 5999999987554321     111111  122344445778999988762 1  


Q ss_pred             -----HHHHHhhccCCEEEEEc
Q 023273          226 -----DKALKAVKEGGRVVSII  242 (284)
Q Consensus       226 -----~~~~~~l~~~G~~v~~g  242 (284)
                           ...+++|+++..+|.++
T Consensus       205 ~~li~~~~l~~mk~ga~lIN~a  226 (312)
T PRK15469        205 VGIINQQLLEQLPDGAYLLNLA  226 (312)
T ss_pred             HHHhHHHHHhcCCCCcEEEECC
Confidence                 46788999998888776

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.074  Score=45.56  Aligned_cols=42  Identities=21%  Similarity=0.256  Sum_probs=35.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+.+++|+|++|.+|...+..+... |++|+++++++++.+..
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~   43 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKK-GYLVIATMRNPEKQENL   43 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhC-CCEEEEEeCCHHHHHHH
Confidence            3578999999999999999888874 99999999887766544

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=95.44  E-value=0.048  Score=42.66  Aligned_cols=72  Identities=18%  Similarity=0.312  Sum_probs=44.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC--hhhHHHH----HHcCCc-EEeeCCCcc---ccc-------CCCc
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS--TAKLDLL----RSLGAD-LAIDYTKEN---IED-------LPEK  214 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~--~~~~~~~----~~~g~~-~~~~~~~~~---~~~-------~~~~  214 (284)
                      ++++|+|+++++|+..++.....++.+++++.++  .++.+.+    ++.+.. .++..+-.+   ...       ....
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4789999999999998887776434567777777  3444333    334422 222211111   111       1357


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++|.++|
T Consensus        81 ld~li~~ag   89 (167)
T PF00106_consen   81 LDILINNAG   89 (167)
T ss_dssp             ESEEEEECS
T ss_pred             ccccccccc
Confidence            999999988

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.43  E-value=0.089  Score=44.98  Aligned_cols=71  Identities=23%  Similarity=0.339  Sum_probs=47.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc-CCc-EE--eeCCCc-cccc-------CCCcccEEE
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-GAD-LA--IDYTKE-NIED-------LPEKFDVVF  219 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~-g~~-~~--~~~~~~-~~~~-------~~~~~d~vi  219 (284)
                      .++||+|++|.+|...++.+... |.+|+++.+++++.+.+++. +.. .+  .|..+. .+.+       ..+++|++|
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLAR-GDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            57999999999999988887774 89999999988877665432 221 11  122111 1111       124689999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      .++|
T Consensus        82 ~~ag   85 (276)
T PRK06482         82 SNAG   85 (276)
T ss_pred             ECCC
Confidence            9887

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.43  E-value=0.098  Score=44.29  Aligned_cols=41  Identities=27%  Similarity=0.468  Sum_probs=33.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      +.+++|+|++|++|..+++.+... |++|+++++++++.+.+
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~-g~~Vi~~~r~~~~~~~~   41 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARA-GAQLVLAARNETRLASL   41 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            357999999999999999888874 89999999987665433

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.42  E-value=0.084  Score=44.19  Aligned_cols=43  Identities=21%  Similarity=0.330  Sum_probs=35.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL  195 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~  195 (284)
                      .+++|+|++|++|...++..... |++|+++++++++.+.+.+.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~   44 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQ-GWQVIACGRNQSVLDELHTQ   44 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHh
Confidence            47899999999999877777774 99999999998887766543

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.41  E-value=0.054  Score=52.43  Aligned_cols=73  Identities=21%  Similarity=0.407  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh---------------------hHHHHHHcCCcEEeeCCC---
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA---------------------KLDLLRSLGADLAIDYTK---  205 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~---------------------~~~~~~~~g~~~~~~~~~---  205 (284)
                      .+++|+|+| +|+.|+.++..++.. |.+|++++..+.                     +.+.++++|.+..++..-   
T Consensus       309 ~~kkVaIIG-~GpaGl~aA~~L~~~-G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  386 (639)
T PRK12809        309 RSEKVAVIG-AGPAGLGCADILARA-GVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRD  386 (639)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHc-CCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCc
Confidence            489999999 899999999999985 999999987653                     445667778665555431   


Q ss_pred             cccccCCCcccEEEeCCCC
Q 023273          206 ENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       206 ~~~~~~~~~~d~vid~~g~  224 (284)
                      ..+.+...++|.+|.++|.
T Consensus       387 ~~~~~l~~~~DaV~latGa  405 (639)
T PRK12809        387 ITFSDLTSEYDAVFIGVGT  405 (639)
T ss_pred             CCHHHHHhcCCEEEEeCCC
Confidence            1222334579999999885

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.40  E-value=0.1  Score=43.99  Aligned_cols=37  Identities=22%  Similarity=0.296  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      .+.+++|+|+++++|.+.++..... |+++++++++++
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~-G~~v~~~~r~~~   43 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQA-GADVALFDLRTD   43 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCcc
Confidence            5779999999999999999988874 999999988643

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=95.39  E-value=0.093  Score=43.96  Aligned_cols=42  Identities=21%  Similarity=0.319  Sum_probs=35.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      ++.++||+|++|.+|...++.+.. .|.+|++++++.++...+
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~-~g~~v~~~~r~~~~~~~~   43 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAE-EGAKVAVFDLNREAAEKV   43 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEecCCHHHHHHH
Confidence            468899999999999999988887 489999998877765444

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.39  E-value=0.075  Score=44.77  Aligned_cols=38  Identities=26%  Similarity=0.485  Sum_probs=33.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      .+++++|+|++|++|...++.+... |++++++++++++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~-g~~v~~~~r~~~~   42 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAA-GATVVVCGRRAPE   42 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCChhh
Confidence            5789999999999999988888774 9999999987654

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.37  E-value=0.094  Score=44.41  Aligned_cols=41  Identities=24%  Similarity=0.364  Sum_probs=34.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL  191 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~  191 (284)
                      .+.+++|+|++|++|.+.++.+... |++|+++.++++..+.
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~-G~~Vv~~~r~~~~~~~   45 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARH-GANLILLDISPEIEKL   45 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHHH
Confidence            5789999999999999999988874 9999999887654333

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.36  E-value=0.13  Score=45.51  Aligned_cols=104  Identities=25%  Similarity=0.288  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~-----  224 (284)
                      .|++|.|+| .|.+|...++.++. +|.+|++.+++.+.. .....+..    .  .++.+.....|+|+-+...     
T Consensus       149 ~gktvgIiG-~G~IG~~vA~~l~~-~G~~V~~~d~~~~~~-~~~~~~~~----~--~~l~ell~~aDiV~l~lP~t~~T~  219 (333)
T PRK13243        149 YGKTIGIIG-FGRIGQAVARRAKG-FGMRILYYSRTRKPE-AEKELGAE----Y--RPLEELLRESDFVSLHVPLTKETY  219 (333)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHH-CCCEEEEECCCCChh-hHHHcCCE----e--cCHHHHHhhCCEEEEeCCCChHHh
Confidence            578999999 89999999999998 599999998865433 23333321    1  1233445678999887652     


Q ss_pred             ---cHHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHHHHHHHHHHCCCee
Q 023273          225 ---CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (284)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  274 (284)
                         ....+..|+++..++.++-..            --+-+.+++.+++|+|.
T Consensus       220 ~~i~~~~~~~mk~ga~lIN~aRg~------------~vd~~aL~~aL~~g~i~  260 (333)
T PRK13243        220 HMINEERLKLMKPTAILVNTARGK------------VVDTKALVKALKEGWIA  260 (333)
T ss_pred             hccCHHHHhcCCCCeEEEECcCch------------hcCHHHHHHHHHcCCeE
Confidence               156788888888888765211            11234556666777764

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.35  E-value=0.11  Score=45.34  Aligned_cols=88  Identities=18%  Similarity=0.219  Sum_probs=57.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcC--CeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc---
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---  225 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~---  225 (284)
                      ..+|.|+| .|.+|.+.+..++.. |  .+|++.++++++.+.+++.|.......   +..+..+..|+||.|+...   
T Consensus         6 ~~~I~IIG-~G~mG~sla~~l~~~-g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~---~~~~~~~~aDvViiavp~~~~~   80 (307)
T PRK07502          6 FDRVALIG-IGLIGSSLARAIRRL-GLAGEIVGADRSAETRARARELGLGDRVTT---SAAEAVKGADLVILCVPVGASG   80 (307)
T ss_pred             CcEEEEEe-eCHHHHHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhCCCCceecC---CHHHHhcCCCEEEECCCHHHHH
Confidence            36799999 899999988888774 6  378999999988888887774211111   1122235688888888641   


Q ss_pred             ---HHHHHhhccCCEEEEEcC
Q 023273          226 ---DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       226 ---~~~~~~l~~~G~~v~~g~  243 (284)
                         ......++++..++.++.
T Consensus        81 ~v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         81 AVAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             HHHHHHHhhCCCCCEEEeCcc
Confidence               223334555555555543

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=95.32  E-value=0.22  Score=43.70  Aligned_cols=90  Identities=17%  Similarity=0.248  Sum_probs=65.3

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc-
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC-  225 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~-  225 (284)
                      ..-.|++|.|+| .|.+|.+.++.++. .|.+|++..+.....+.++..|.. +.     +..+..+..|+|+-+..+. 
T Consensus        12 ~~LkgKtVGIIG-~GsIG~amA~nL~d-~G~~ViV~~r~~~s~~~A~~~G~~-v~-----sl~Eaak~ADVV~llLPd~~   83 (335)
T PRK13403         12 ELLQGKTVAVIG-YGSQGHAQAQNLRD-SGVEVVVGVRPGKSFEVAKADGFE-VM-----SVSEAVRTAQVVQMLLPDEQ   83 (335)
T ss_pred             hhhCcCEEEEEe-EcHHHHHHHHHHHH-CcCEEEEEECcchhhHHHHHcCCE-EC-----CHHHHHhcCCEEEEeCCChH
Confidence            345789999999 99999999999999 499999887765555566666653 11     2344456789998877531 


Q ss_pred             ------HHHHHhhccCCEEEEEcCC
Q 023273          226 ------DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       226 ------~~~~~~l~~~G~~v~~g~~  244 (284)
                            ...+..|+++..+++..+.
T Consensus        84 t~~V~~~eil~~MK~GaiL~f~hgf  108 (335)
T PRK13403         84 QAHVYKAEVEENLREGQMLLFSHGF  108 (335)
T ss_pred             HHHHHHHHHHhcCCCCCEEEECCCc
Confidence                  4577788888877766544

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.31  E-value=0.099  Score=44.14  Aligned_cols=73  Identities=22%  Similarity=0.377  Sum_probs=46.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh--HHHHHHcCCcE-Ee--eCCC-ccccc-------CCCccc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK--LDLLRSLGADL-AI--DYTK-ENIED-------LPEKFD  216 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~--~~~~~~~g~~~-~~--~~~~-~~~~~-------~~~~~d  216 (284)
                      .+++++|+|+++++|.+.++.+... |++|+++.+++..  .+.+++.+... .+  |-.+ +....       ..+++|
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD   85 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKA-GADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID   85 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999888774 9999888765321  22333444321 22  2211 11111       134699


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      ++++++|
T Consensus        86 ~lv~~ag   92 (251)
T PRK12481         86 ILINNAG   92 (251)
T ss_pred             EEEECCC
Confidence            9999887

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.30  E-value=0.097  Score=43.90  Aligned_cols=42  Identities=26%  Similarity=0.426  Sum_probs=34.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+.+++|+|++|.+|...++..... |++++++.++.++....
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~   45 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFARE-GARVVVADRDAEAAERV   45 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHC-CCeEEEecCCHHHHHHH
Confidence            4679999999999999988877774 89999999887665443

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.30  E-value=0.072  Score=44.97  Aligned_cols=41  Identities=27%  Similarity=0.396  Sum_probs=34.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      +++++|+|++|.+|...+..+... |++++++++++++.+.+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~-g~~v~~~~r~~~~~~~~   42 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAA-GDRVLALDIDAAALAAF   42 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            468999999999999988887774 89999999987776544

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=95.30  E-value=0.065  Score=49.84  Aligned_cols=74  Identities=24%  Similarity=0.505  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh---------------------hhHHHHHHcCCcEEeeCCCc-
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST---------------------AKLDLLRSLGADLAIDYTKE-  206 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~---------------------~~~~~~~~~g~~~~~~~~~~-  206 (284)
                      ..+++|+|+| +|+.|+.++..++.. |.+|++++..+                     ...+.++++|.+..++..-. 
T Consensus       139 ~~~~~V~IIG-~GpaGl~aA~~l~~~-G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~  216 (467)
T TIGR01318       139 PTGKRVAVIG-AGPAGLACADILARA-GVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR  216 (467)
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHHc-CCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC
Confidence            3678999999 899999999999985 99998887654                     23466677886655443211 


Q ss_pred             --ccccCCCcccEEEeCCCC
Q 023273          207 --NIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       207 --~~~~~~~~~d~vid~~g~  224 (284)
                        .......++|.+|.++|.
T Consensus       217 ~~~~~~~~~~~D~vilAtGa  236 (467)
T TIGR01318       217 DISLDDLLEDYDAVFLGVGT  236 (467)
T ss_pred             ccCHHHHHhcCCEEEEEeCC
Confidence              111223479999999985

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK06484 short chain dehydrogenase; Validated

Probab=95.30  E-value=0.073  Score=50.05  Aligned_cols=73  Identities=22%  Similarity=0.381  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcE-Ee--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADL-AI--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~-~~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .++++||+|+++++|++.++..... |++|+++.+++++.+.+.+ .+... .+  |-.+ +.....       .+.+|+
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAA-GDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988887774 8999999998887766643 44321 12  2221 111111       246999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|+++|
T Consensus       347 li~nAg  352 (520)
T PRK06484        347 LVNNAG  352 (520)
T ss_pred             EEECCC
Confidence            999876

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.28  E-value=0.086  Score=42.97  Aligned_cols=93  Identities=18%  Similarity=0.225  Sum_probs=59.3

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCcccccCCCcccEE
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~d~v  218 (284)
                      ..+..++.+||-+| + +.|..+..+++.  +.+|++++.+++-.+.+++    .+..  .....+-..+ ...+.+|+|
T Consensus        25 ~l~~~~~~~vLDiG-c-G~G~~a~~La~~--g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I   99 (197)
T PRK11207         25 AVKVVKPGKTLDLG-C-GNGRNSLYLAAN--GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNL-TFDGEYDFI   99 (197)
T ss_pred             hcccCCCCcEEEEC-C-CCCHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhC-CcCCCcCEE
Confidence            34556778999998 3 447788888875  7899999999887666543    2221  1111111111 124569999


Q ss_pred             EeCCC----C-------cHHHHHhhccCCEEEEEc
Q 023273          219 FDAVG----Q-------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       219 id~~g----~-------~~~~~~~l~~~G~~v~~g  242 (284)
                      +.+..    .       ...+.+.|+++|+++.+.
T Consensus       100 ~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207        100 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             EEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            87633    1       257788899999965543

>PLN02928 oxidoreductase family protein

Probab=95.28  E-value=0.12  Score=46.10  Aligned_cols=91  Identities=25%  Similarity=0.340  Sum_probs=61.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC----C-cEEee--CCCcccccCCCcccEEEeC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG----A-DLAID--YTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g----~-~~~~~--~~~~~~~~~~~~~d~vid~  221 (284)
                      -.|.++.|+| .|.+|..+++.++. +|++|++.+++..+... ..++    . ....+  ....++.+.-...|+|+.+
T Consensus       157 l~gktvGIiG-~G~IG~~vA~~l~a-fG~~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~  233 (347)
T PLN02928        157 LFGKTVFILG-YGAIGIELAKRLRP-FGVKLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC  233 (347)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHhh-CCCEEEEECCCCChhhh-hhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence            3578999999 89999999999999 49999999876332111 1110    0 00000  0112344445678999988


Q ss_pred             CCC--------cHHHHHhhccCCEEEEEc
Q 023273          222 VGQ--------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       222 ~g~--------~~~~~~~l~~~G~~v~~g  242 (284)
                      ...        -...+..|+++..+|-++
T Consensus       234 lPlt~~T~~li~~~~l~~Mk~ga~lINva  262 (347)
T PLN02928        234 CTLTKETAGIVNDEFLSSMKKGALLVNIA  262 (347)
T ss_pred             CCCChHhhcccCHHHHhcCCCCeEEEECC
Confidence            652        168899999999888776

>PRK06398 aldose dehydrogenase; Validated

Probab=95.25  E-value=0.065  Score=45.45  Aligned_cols=38  Identities=24%  Similarity=0.409  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      .+++++|+|+++++|.+.+...... |++|+++.+++++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~-G~~Vi~~~r~~~~   42 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEE-GSNVINFDIKEPS   42 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCccc
Confidence            4789999999999999999888874 9999999887554

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.23  E-value=0.21  Score=39.18  Aligned_cols=84  Identities=13%  Similarity=0.118  Sum_probs=51.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-CCCcccEEEeCCCCc--
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-LPEKFDVVFDAVGQC--  225 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~d~vid~~g~~--  225 (284)
                      -.|.+|+|+| +|.+|..-++.... .|++|.++.  ++..+.+++++... +..  ..+.+ --.++|+|+-++++.  
T Consensus        11 l~~~~vlVvG-GG~va~rka~~Ll~-~ga~V~VIs--p~~~~~l~~l~~i~-~~~--~~~~~~dl~~a~lViaaT~d~e~   83 (157)
T PRK06719         11 LHNKVVVIIG-GGKIAYRKASGLKD-TGAFVTVVS--PEICKEMKELPYIT-WKQ--KTFSNDDIKDAHLIYAATNQHAV   83 (157)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEEc--CccCHHHHhccCcE-EEe--cccChhcCCCceEEEECCCCHHH
Confidence            3678999999 79999988887777 488888774  44444455554211 111  11111 136799999999863  


Q ss_pred             HHHHHhhccCCEEE
Q 023273          226 DKALKAVKEGGRVV  239 (284)
Q Consensus       226 ~~~~~~l~~~G~~v  239 (284)
                      +..+...++.+.++
T Consensus        84 N~~i~~~a~~~~~v   97 (157)
T PRK06719         84 NMMVKQAAHDFQWV   97 (157)
T ss_pred             HHHHHHHHHHCCcE
Confidence            44444444333333

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.22  E-value=0.066  Score=45.97  Aligned_cols=44  Identities=34%  Similarity=0.491  Sum_probs=37.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~  193 (284)
                      -.|+.++|+|++.++|.+.+...... |++|+++.+++++.+..+
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~-Ga~v~i~~r~~~~~~~~~   49 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKA-GAKVVITGRSEERLEETA   49 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence            46889999999999999887777774 999999999988876553

>PRK07102 short chain dehydrogenase; Provisional

Probab=95.21  E-value=0.11  Score=43.50  Aligned_cols=40  Identities=23%  Similarity=0.353  Sum_probs=33.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      ++++|+|++|++|...++..... |++|+++++++++.+..
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~   41 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAA-GARLYLAARDVERLERL   41 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHH
Confidence            57999999999999998888874 99999999988766443

>PRK06953 short chain dehydrogenase; Provisional

Probab=95.21  E-value=0.1  Score=43.06  Aligned_cols=71  Identities=27%  Similarity=0.476  Sum_probs=48.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE-EeeCCC-ccccc----C-CCcccEEEeCCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL-AIDYTK-ENIED----L-PEKFDVVFDAVG  223 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~-~~~~~~-~~~~~----~-~~~~d~vid~~g  223 (284)
                      ++++|+|++|.+|...++.... .|++++++++++++.+.++..+... ..|-.+ +.+..    . ...+|+++.+.|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRA-DGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHh-CCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCC
Confidence            4789999999999998887776 4999999999888777666554321 122211 11111    1 236899998876

>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases

Probab=95.20  E-value=0.29  Score=40.17  Aligned_cols=98  Identities=23%  Similarity=0.278  Sum_probs=63.3

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC--CeEEEEeCChhhHHHHHHcCC----cEEeeCCCcccccCCCcccE
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSLGA----DLAIDYTKENIEDLPEKFDV  217 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~d~  217 (284)
                      ......++.+|+-+| +|. |..+..+++.. +  .++++++.+++..+.+++...    ..++..+........+.+|+
T Consensus        33 ~~~~~~~~~~vldiG-~G~-G~~~~~~~~~~-~~~~~~~~iD~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~  109 (223)
T TIGR01934        33 KLIGVFKGQKVLDVA-CGT-GDLAIELAKSA-PDRGKVTGVDFSSEMLEVAKKKSELPLNIEFIQADAEALPFEDNSFDA  109 (223)
T ss_pred             HHhccCCCCeEEEeC-CCC-ChhHHHHHHhc-CCCceEEEEECCHHHHHHHHHHhccCCCceEEecchhcCCCCCCcEEE
Confidence            344455889999998 444 77777888774 5  589999999888777765321    12222111111112356999


Q ss_pred             EEeCCC-----C----cHHHHHhhccCCEEEEEcCC
Q 023273          218 VFDAVG-----Q----CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       218 vid~~g-----~----~~~~~~~l~~~G~~v~~g~~  244 (284)
                      ++...+     .    .+.+.+.|+++|++++++..
T Consensus       110 i~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  145 (223)
T TIGR01934       110 VTIAFGLRNVTDIQKALREMYRVLKPGGRLVILEFS  145 (223)
T ss_pred             EEEeeeeCCcccHHHHHHHHHHHcCCCcEEEEEEec
Confidence            876433     1    26788899999999987643

Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.19  E-value=0.4  Score=39.35  Aligned_cols=89  Identities=22%  Similarity=0.282  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh-hHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc---
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---  225 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~---  225 (284)
                      .|.+|+|+| .|.+|...++.+.. .|++|++++.... .+..+.+.+.-..+..+. . .....++++||-++++.   
T Consensus         8 ~gk~vlVvG-gG~va~rk~~~Ll~-~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~-~-~~dl~~~~lVi~at~d~~ln   83 (205)
T TIGR01470         8 EGRAVLVVG-GGDVALRKARLLLK-AGAQLRVIAEELESELTLLAEQGGITWLARCF-D-ADILEGAFLVIAATDDEELN   83 (205)
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHH-CCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCC-C-HHHhCCcEEEEECCCCHHHH
Confidence            477999999 89999998888888 4999998876433 333333444222222211 1 11236899999999974   


Q ss_pred             HHHHHhhccCCEEEEEc
Q 023273          226 DKALKAVKEGGRVVSII  242 (284)
Q Consensus       226 ~~~~~~l~~~G~~v~~g  242 (284)
                      .......+..|.+|.+.
T Consensus        84 ~~i~~~a~~~~ilvn~~  100 (205)
T TIGR01470        84 RRVAHAARARGVPVNVV  100 (205)
T ss_pred             HHHHHHHHHcCCEEEEC
Confidence            34455555667776554

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK07402 precorrin-6B methylase; Provisional

Probab=95.19  E-value=0.32  Score=39.44  Aligned_cols=97  Identities=18%  Similarity=0.278  Sum_probs=60.2

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCc-ccccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKE-NIEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~-~~~~~~~~~d  216 (284)
                      ...++.++++|+-+|+  +.|..++.+++...+.+++.++.+++..+.+++    ++..  .++..+.. .+......+|
T Consensus        34 ~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d  111 (196)
T PRK07402         34 SQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPD  111 (196)
T ss_pred             HhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCC
Confidence            4567788999999884  445566666665346799999999988777653    4432  22322211 1222222345


Q ss_pred             EE-EeCCCC----cHHHHHhhccCCEEEEEc
Q 023273          217 VV-FDAVGQ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       217 ~v-id~~g~----~~~~~~~l~~~G~~v~~g  242 (284)
                      .+ ++....    ++.+.+.|+++|+++...
T Consensus       112 ~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        112 RVCIEGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             EEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence            44 443222    378888999999998764

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.19  E-value=0.13  Score=43.16  Aligned_cols=42  Identities=29%  Similarity=0.320  Sum_probs=35.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+.+++|+|++|.+|...++..... |.+++++++++++.+..
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~   44 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKE-GAKVVIADLNDEAAAAA   44 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH
Confidence            4679999999999999999988874 99999999987765444

>TIGR00438 rrmJ cell division protein FtsJ

Probab=95.19  E-value=0.18  Score=40.59  Aligned_cols=92  Identities=26%  Similarity=0.305  Sum_probs=53.5

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe--eCCCcc-c----ccC-CCccc
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTKEN-I----EDL-PEKFD  216 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~~~-~----~~~-~~~~d  216 (284)
                      ...++++++||.+| +|+-+++.....+.....++++++.++++    +..+.. .+  +..+.. .    ... .+++|
T Consensus        27 ~~~i~~g~~VLDiG-~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~~~~~~~D  100 (188)
T TIGR00438        27 FKLIKPGDTVLDLG-AAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRERVGDDKVD  100 (188)
T ss_pred             hcccCCCCEEEEec-CCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHHhCCCCcc
Confidence            35678999999999 55555443333332124579999998764    111222 22  221111 0    011 34799


Q ss_pred             EEEeC-----CCC---------------cHHHHHhhccCCEEEEEc
Q 023273          217 VVFDA-----VGQ---------------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       217 ~vid~-----~g~---------------~~~~~~~l~~~G~~v~~g  242 (284)
                      +|+..     .|.               ...+.++|+++|+++...
T Consensus       101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438       101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            99952     221               145788999999999754

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=95.18  E-value=0.08  Score=39.48  Aligned_cols=89  Identities=25%  Similarity=0.327  Sum_probs=52.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh-hHHHHHHc-C----C-cEEeeCCCcccccCCCcccEEEeCCCC-
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSL-G----A-DLAIDYTKENIEDLPEKFDVVFDAVGQ-  224 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~~~~~-g----~-~~~~~~~~~~~~~~~~~~d~vid~~g~-  224 (284)
                      +|.|+|++|-+|...+++......+.++.+..+++ .-..+... .    . +..+..  .+... ..++|++|.|.++ 
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~Dvvf~a~~~~   77 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPEE-LSDVDVVFLALPHG   77 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGHH-HTTESEEEE-SCHH
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchhH-hhcCCEEEecCchh
Confidence            58899999999999999988765677666555444 22222221 1    1 111211  11222 2789999999985 


Q ss_pred             -cHHHHH-hhccCCEEEEEcCC
Q 023273          225 -CDKALK-AVKEGGRVVSIIGS  244 (284)
Q Consensus       225 -~~~~~~-~l~~~G~~v~~g~~  244 (284)
                       ...... .+.++-+++..+..
T Consensus        78 ~~~~~~~~~~~~g~~ViD~s~~   99 (121)
T PF01118_consen   78 ASKELAPKLLKAGIKVIDLSGD   99 (121)
T ss_dssp             HHHHHHHHHHHTTSEEEESSST
T ss_pred             HHHHHHHHHhhCCcEEEeCCHH
Confidence             244444 45556667766543

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.16  E-value=0.11  Score=43.84  Aligned_cols=74  Identities=27%  Similarity=0.406  Sum_probs=48.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHH----HHHcCCcE-E--eeCCCc-ccccC-------C
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDL----LRSLGADL-A--IDYTKE-NIEDL-------P  212 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~----~~~~g~~~-~--~~~~~~-~~~~~-------~  212 (284)
                      ..+++++|+|++|++|...++.+... |++ |+++.+++++...    ++..+... .  .|..+. .+.+.       .
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~-G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAER-GAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999888874 888 8888887665542    22333321 1  222211 11111       2


Q ss_pred             CcccEEEeCCC
Q 023273          213 EKFDVVFDAVG  223 (284)
Q Consensus       213 ~~~d~vid~~g  223 (284)
                      +++|++|++.|
T Consensus        83 g~id~li~~ag   93 (260)
T PRK06198         83 GRLDALVNAAG   93 (260)
T ss_pred             CCCCEEEECCC
Confidence            46999999987

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.16  E-value=0.12  Score=43.60  Aligned_cols=73  Identities=19%  Similarity=0.291  Sum_probs=46.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh--hHHHHHHcCCc-EEeeCCCc---cccc-------CCCccc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLGAD-LAIDYTKE---NIED-------LPEKFD  216 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~--~~~~~~~~g~~-~~~~~~~~---~~~~-------~~~~~d  216 (284)
                      .+.+++|+|++|++|.+.++..... |++|+.+++++.  ..+.+++.+.. ..+..+-.   ....       ..+.+|
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEA-GCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999988774 999988765432  22333444422 12221111   1111       124799


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      ++|+++|
T Consensus        88 ~li~~Ag   94 (253)
T PRK08993         88 ILVNNAG   94 (253)
T ss_pred             EEEECCC
Confidence            9999887

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.15  E-value=0.14  Score=45.14  Aligned_cols=84  Identities=24%  Similarity=0.362  Sum_probs=62.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC-C----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g-~----  224 (284)
                      .|+++-|+| .|.+|.+.++.++. +|++|+..++++. .+..++.+..++ +     +.+..+..|++.-+.. +    
T Consensus       145 ~gktvGIiG-~GrIG~avA~r~~~-Fgm~v~y~~~~~~-~~~~~~~~~~y~-~-----l~ell~~sDii~l~~Plt~~T~  215 (324)
T COG1052         145 RGKTLGIIG-LGRIGQAVARRLKG-FGMKVLYYDRSPN-PEAEKELGARYV-D-----LDELLAESDIISLHCPLTPETR  215 (324)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhc-CCCEEEEECCCCC-hHHHhhcCceec-c-----HHHHHHhCCEEEEeCCCChHHh
Confidence            489999999 99999999999997 7999999998765 333334433321 1     3444567888765544 2    


Q ss_pred             ---cHHHHHhhccCCEEEEEc
Q 023273          225 ---CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g  242 (284)
                         -...+..|++++.+|-++
T Consensus       216 hLin~~~l~~mk~ga~lVNta  236 (324)
T COG1052         216 HLINAEELAKMKPGAILVNTA  236 (324)
T ss_pred             hhcCHHHHHhCCCCeEEEECC
Confidence               168899999999998776

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=95.15  E-value=0.026  Score=48.54  Aligned_cols=66  Identities=23%  Similarity=0.218  Sum_probs=44.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC
Q 023273          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      |||+|++|.+|...++.+... |.+|+++++++++.......+   +.+...........++|+||.+++
T Consensus         1 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~D~Vvh~a~   66 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKD-GHEVTILTRSPPAGANTKWEG---YKPWAPLAESEALEGADAVINLAG   66 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHc-CCEEEEEeCCCCCCCccccee---eecccccchhhhcCCCCEEEECCC
Confidence            689999999999999888874 899999999776643322111   111111122223467999999886

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.14  E-value=0.13  Score=43.31  Aligned_cols=73  Identities=23%  Similarity=0.343  Sum_probs=46.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC-hhhHHHHHHcCCcEE-eeCCC-ccccc-------CCCcccEEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-TAKLDLLRSLGADLA-IDYTK-ENIED-------LPEKFDVVF  219 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~-~~~~~~~~~~g~~~~-~~~~~-~~~~~-------~~~~~d~vi  219 (284)
                      .+++++|+|++|++|.+.++..... |++|+++.+. ++..+.+++.+...+ .|-.+ +....       ..+++|++|
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLRE-GAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999998888774 8998877654 334444444332111 12211 11111       124689999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      .++|
T Consensus        85 ~~ag   88 (255)
T PRK06463         85 NNAG   88 (255)
T ss_pred             ECCC
Confidence            9886

>PRK08303 short chain dehydrogenase; Provisional

Probab=95.14  E-value=0.11  Score=45.39  Aligned_cols=35  Identities=29%  Similarity=0.327  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      .+++++|+|+++++|+++++..... |++|+++.++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~-G~~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAA-GATVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecc
Confidence            5789999999999999999888874 9999998876

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.13  E-value=0.23  Score=42.68  Aligned_cols=73  Identities=12%  Similarity=0.208  Sum_probs=49.1

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHH-cCCcEEeeCCCcccccCCCcccEEE
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-LGADLAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      +++..+...+++++|+| +|+.+++++..++.+ |+ ++.++.++++|.+.+.+ ++..    .. ... . ...+|++|
T Consensus       113 ~L~~~~~~~~~~vlilG-aGGaarAi~~aL~~~-g~~~i~i~nR~~~~a~~la~~~~~~----~~-~~~-~-~~~~dlvI  183 (272)
T PRK12550        113 LLASYQVPPDLVVALRG-SGGMAKAVAAALRDA-GFTDGTIVARNEKTGKALAELYGYE----WR-PDL-G-GIEADILV  183 (272)
T ss_pred             HHHhcCCCCCCeEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHhCCc----ch-hhc-c-cccCCEEE
Confidence            44433444567999999 799999988888875 65 69999999888776643 3311    11 011 1 24589999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +|+.
T Consensus       184 NaTp  187 (272)
T PRK12550        184 NVTP  187 (272)
T ss_pred             ECCc
Confidence            9974

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.11  E-value=0.15  Score=42.90  Aligned_cols=41  Identities=29%  Similarity=0.413  Sum_probs=34.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL  191 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~  191 (284)
                      ++++++|+|++|.+|...+...... |++++++.+++++.+.
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~-G~~v~~~~r~~~~~~~   50 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGA-GAHVLVNGRNAATLEA   50 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeCCHHHHHH
Confidence            5889999999999999988877774 9999999998776544

>PRK07985 oxidoreductase; Provisional

Probab=95.10  E-value=0.23  Score=43.07  Aligned_cols=36  Identities=22%  Similarity=0.291  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      ..+++++|+|+++++|.+.++.+... |++|+++.++
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~-G~~Vi~~~~~   82 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYARE-GADVAISYLP   82 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEecCC
Confidence            36679999999999999988888874 9999887653

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.10  E-value=0.23  Score=42.58  Aligned_cols=90  Identities=19%  Similarity=0.279  Sum_probs=58.4

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-Hc---CCcEEeeCCCcccccCCCcccEEEeCCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL---GADLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~---g~~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      ...+++++|+| +|++|.+++..+... |++++++.+++++.+.+. .+   +.........    .....+|++|+|++
T Consensus       114 ~~~~k~vliiG-aGg~g~aia~~L~~~-g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~----~~~~~~DivInatp  187 (270)
T TIGR00507       114 LRPNQRVLIIG-AGGAARAVALPLLKA-DCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE----LPLHRVDLIINATS  187 (270)
T ss_pred             CccCCEEEEEc-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh----hcccCccEEEECCC
Confidence            34578999999 589999988887774 889999999887765443 32   2212221111    11246999999987


Q ss_pred             Cc--------HHHHHhhccCCEEEEEcC
Q 023273          224 QC--------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       224 ~~--------~~~~~~l~~~G~~v~~g~  243 (284)
                      ..        ......++++..++.+..
T Consensus       188 ~gm~~~~~~~~~~~~~l~~~~~v~D~~y  215 (270)
T TIGR00507       188 AGMSGNIDEPPVPAEKLKEGMVVYDMVY  215 (270)
T ss_pred             CCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence            31        112456777777776654

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=95.10  E-value=0.13  Score=43.36  Aligned_cols=42  Identities=21%  Similarity=0.367  Sum_probs=35.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|+++++|...+...... |++++++.+++++.+.+
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~-G~~vv~~~r~~~~~~~~   51 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHV   51 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH
Confidence            4789999999999999998887774 99999998877765443

>PRK07791 short chain dehydrogenase; Provisional

Probab=95.09  E-value=0.16  Score=43.89  Aligned_cols=37  Identities=24%  Similarity=0.374  Sum_probs=31.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      ..+++++|+|+++++|.+.++..... |+++++++++.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~-G~~vii~~~~~   40 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAE-GARVVVNDIGV   40 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEeeCCc
Confidence            46789999999999999988877774 89999887654

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.09  E-value=0.13  Score=43.44  Aligned_cols=36  Identities=28%  Similarity=0.384  Sum_probs=31.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      ..+.++||+|+++++|.+.++..... |++++++.++
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~~~   48 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKA-GADIIITTHG   48 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCC
Confidence            35789999999999999999888874 9999999887

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=95.07  E-value=0.12  Score=45.25  Aligned_cols=41  Identities=15%  Similarity=0.254  Sum_probs=34.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHH
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL  192 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~  192 (284)
                      +.+++|+|+++++|.+.++..... | .+|+++.+++++.+.+
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~-G~~~V~l~~r~~~~~~~~   44 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAAT-GEWHVIMACRDFLKAEQA   44 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHH
Confidence            568999999999999988777764 8 8999999887776544

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.06  E-value=0.13  Score=43.79  Aligned_cols=37  Identities=27%  Similarity=0.276  Sum_probs=29.6

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          149 SAGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       149 ~~g~~vlI~ga~g--~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      ..+++++|+|+++  ++|.+.++..... |++|++..+++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~-G~~vil~~r~~   42 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQND   42 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHC-CCEEEEEecch
Confidence            3578999999875  8999988777764 89998887763

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.05  E-value=0.15  Score=42.39  Aligned_cols=42  Identities=29%  Similarity=0.374  Sum_probs=35.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      ++++++|+|++|.+|...++..... |.+|+++.+++++.+..
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~   45 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAAD-GAKVVIYDSNEEAAEAL   45 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChhHHHHH
Confidence            4578999999999999999888874 99999999987775443

>TIGR00452 methyltransferase, putative

Probab=95.04  E-value=0.29  Score=42.99  Aligned_cols=94  Identities=20%  Similarity=0.204  Sum_probs=58.5

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH---HHc-C---CcEEeeCCCcccccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL---RSL-G---ADLAIDYTKENIEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~---~~~-g---~~~~~~~~~~~~~~~~~~~d  216 (284)
                      ......+|++|+-+| ||. |..+..++.. +...++.++.++.-...+   +.. +   ...+....-+++.. ...||
T Consensus       115 ~~l~~~~g~~VLDvG-CG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~~ie~lp~-~~~FD  190 (314)
T TIGR00452       115 PHLSPLKGRTILDVG-CGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPLGIEQLHE-LYAFD  190 (314)
T ss_pred             HhcCCCCCCEEEEec-cCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEECCHHHCCC-CCCcC
Confidence            345667889999999 444 7777777765 345788999887654432   222 2   11222222222222 24699


Q ss_pred             EEEeCCC-----C----cHHHHHhhccCCEEEEE
Q 023273          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       217 ~vid~~g-----~----~~~~~~~l~~~G~~v~~  241 (284)
                      +|+...-     +    +..+.++|+++|++++.
T Consensus       191 ~V~s~gvL~H~~dp~~~L~el~r~LkpGG~Lvle  224 (314)
T TIGR00452       191 TVFSMGVLYHRKSPLEHLKQLKHQLVIKGELVLE  224 (314)
T ss_pred             EEEEcchhhccCCHHHHHHHHHHhcCCCCEEEEE
Confidence            9986531     2    36788999999999964

Known examples to date are restricted to the proteobacteria.

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.00  E-value=0.35  Score=40.48  Aligned_cols=34  Identities=21%  Similarity=0.338  Sum_probs=27.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~  184 (284)
                      .+.++||+|++|.+|...++..... |+++++..+
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~-g~~v~~~~~   38 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKE-GSLVVVNAK   38 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeC
Confidence            3679999999999999988877764 888877664

>PRK06484 short chain dehydrogenase; Validated

Probab=95.00  E-value=0.11  Score=48.83  Aligned_cols=73  Identities=30%  Similarity=0.473  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcE-E--eeCCC-ccccc----C---CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-A--IDYTK-ENIED----L---PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~--~~~~~-~~~~~----~---~~~~d~  217 (284)
                      .+++++|+|+++++|.+.++.+... |++|+++.++.++.+.+ ++++... .  .|-.+ +.+..    .   .+.+|+
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARA-GDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            5789999999999999999988874 99999999988876554 4454321 1  22221 11111    1   246999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|+++|
T Consensus        83 li~nag   88 (520)
T PRK06484         83 LVNNAG   88 (520)
T ss_pred             EEECCC
Confidence            999876

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=94.98  E-value=0.15  Score=43.31  Aligned_cols=42  Identities=24%  Similarity=0.296  Sum_probs=35.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+.+++|+|+++++|...+...... |++++++.+++++.+.+
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~-G~~vv~~~~~~~~~~~~   50 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKA-GATIVFNDINQELVDKG   50 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH
Confidence            5689999999999999988877774 99999998887765443

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=94.98  E-value=0.61  Score=42.35  Aligned_cols=95  Identities=23%  Similarity=0.311  Sum_probs=63.5

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHH-HHHcCCcEEeeCCCcccccCCCcccEEEeCCC
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDL-LRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      .+--.+.+++++| +|-+|..++...... | .+++++.+..+|... +++++.. ++..+  ...+....+|+||.+++
T Consensus       173 ~~~L~~~~vlvIG-AGem~~lva~~L~~~-g~~~i~IaNRT~erA~~La~~~~~~-~~~l~--el~~~l~~~DvVissTs  247 (414)
T COG0373         173 FGSLKDKKVLVIG-AGEMGELVAKHLAEK-GVKKITIANRTLERAEELAKKLGAE-AVALE--ELLEALAEADVVISSTS  247 (414)
T ss_pred             hcccccCeEEEEc-ccHHHHHHHHHHHhC-CCCEEEEEcCCHHHHHHHHHHhCCe-eecHH--HHHHhhhhCCEEEEecC
Confidence            3334788999999 899998888887774 6 678888888887654 4678843 22221  22333567999999998


Q ss_pred             Cc------HHHHHhhccCCE--EEEEcCCC
Q 023273          224 QC------DKALKAVKEGGR--VVSIIGSV  245 (284)
Q Consensus       224 ~~------~~~~~~l~~~G~--~v~~g~~~  245 (284)
                      ++      ....+.++..-+  ++.++.|.
T Consensus       248 a~~~ii~~~~ve~a~~~r~~~livDiavPR  277 (414)
T COG0373         248 APHPIITREMVERALKIRKRLLIVDIAVPR  277 (414)
T ss_pred             CCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence            63      455556665544  44556664

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=94.98  E-value=0.25  Score=38.87  Aligned_cols=66  Identities=26%  Similarity=0.316  Sum_probs=44.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~  224 (284)
                      .+|-++| .|.+|...+.-+... |.++++.++++++.+.+.+.|.... ++    ..+..+..|+||-|..+
T Consensus         2 ~~Ig~IG-lG~mG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~g~~~~-~s----~~e~~~~~dvvi~~v~~   67 (163)
T PF03446_consen    2 MKIGFIG-LGNMGSAMARNLAKA-GYEVTVYDRSPEKAEALAEAGAEVA-DS----PAEAAEQADVVILCVPD   67 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHT-TTEEEEEESSHHHHHHHHHTTEEEE-SS----HHHHHHHBSEEEE-SSS
T ss_pred             CEEEEEc-hHHHHHHHHHHHHhc-CCeEEeeccchhhhhhhHHhhhhhh-hh----hhhHhhcccceEeeccc
Confidence            3688999 899999988887774 9999999999999988887774321 11    11112345666666553

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=94.98  E-value=0.46  Score=39.65  Aligned_cols=98  Identities=15%  Similarity=0.225  Sum_probs=60.7

Q ss_pred             HHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCC---eEEEEeCC----hhh--------HHHHHHcCCcEEeeCC
Q 023273          141 EGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGA---SKVAATSS----TAK--------LDLLRSLGADLAIDYT  204 (284)
Q Consensus       141 ~al~~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~---~vi~~~~~----~~~--------~~~~~~~g~~~~~~~~  204 (284)
                      .+++..+ --.+.+++|+| +|+.|.+++..+... |.   ++++++++    .++        .++++.++... .+  
T Consensus        14 ~al~~~g~~l~~~rvlvlG-AGgAg~aiA~~L~~~-G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~--   88 (226)
T cd05311          14 NALKLVGKKIEEVKIVING-AGAAGIAIARLLLAA-GAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG--   88 (226)
T ss_pred             HHHHHhCCCccCCEEEEEC-chHHHHHHHHHHHHc-CcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc--
Confidence            3444433 24567999999 799999998888775 75   58888887    444        22334443211 11  


Q ss_pred             CcccccCCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCC
Q 023273          205 KENIEDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       205 ~~~~~~~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~  244 (284)
                       ..+.+.-+++|++|++++.   ....++.|.++..+..+..|
T Consensus        89 -~~l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~lsnP  130 (226)
T cd05311          89 -GTLKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALANP  130 (226)
T ss_pred             -CCHHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeCCC
Confidence             1222223468999999862   25667777777666655544

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=94.96  E-value=0.16  Score=42.34  Aligned_cols=73  Identities=25%  Similarity=0.417  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEeeCC--C-ccccc-------CCCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAIDYT--K-ENIED-------LPEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~~~~--~-~~~~~-------~~~~~d~  217 (284)
                      ++.+++|+|++|.+|...++..... |..|+...++.++.+... +.+.. ..+..+  + +.+..       ..+++|.
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQ-GAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4679999999999999988888774 888888888777665543 33321 122211  1 11111       1246899


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|.++|
T Consensus        84 vi~~ag   89 (245)
T PRK12936         84 LVNNAG   89 (245)
T ss_pred             EEECCC
Confidence            999987

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=94.96  E-value=0.55  Score=41.41  Aligned_cols=93  Identities=19%  Similarity=0.250  Sum_probs=57.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhc---CCeEEEEeC--ChhhHHHHHHcCCc--------------EEeeC---------C
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVF---GASKVAATS--STAKLDLLRSLGAD--------------LAIDY---------T  204 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~---g~~vi~~~~--~~~~~~~~~~~g~~--------------~~~~~---------~  204 (284)
                      +|.|.| .|.+|+..++.+....   ...++.+..  +++-+.++-++...              .+++.         +
T Consensus         1 ~IaInG-fGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAING-FGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEEC-CCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            478999 5999999999877631   255555433  33334444332210              01110         1


Q ss_pred             CcccccCCCcccEEEeCCCCc---HHHHHhhccCCEEEEEcCCCC
Q 023273          205 KENIEDLPEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVT  246 (284)
Q Consensus       205 ~~~~~~~~~~~d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~  246 (284)
                      ...++....++|+||+|+|.+   +.+...+..|++.|.++.+..
T Consensus        80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP~~  124 (325)
T TIGR01532        80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHPGA  124 (325)
T ss_pred             hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCCCc
Confidence            111222235899999999963   677889999999999998743

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=94.94  E-value=0.27  Score=39.54  Aligned_cols=90  Identities=26%  Similarity=0.355  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc--EEeeCCCcccccCCCcccEEEeCC-
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD--LAIDYTKENIEDLPEKFDVVFDAV-  222 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~--~~~~~~~~~~~~~~~~~d~vid~~-  222 (284)
                      ++++|+-+|+  +.|..++.+++...+.+++.++.+++..+.++    +.+..  .++..+...+. ..+.+|+|+... 
T Consensus        42 ~~~~vLDiGc--GtG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d~~~~~-~~~~fD~I~s~~~  118 (181)
T TIGR00138        42 DGKKVIDIGS--GAGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGRAEDFQ-HEEQFDVITSRAL  118 (181)
T ss_pred             CCCeEEEecC--CCCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecchhhcc-ccCCccEEEehhh
Confidence            4889999984  34556666665533578999999988665553    34432  22333222221 245799987653 


Q ss_pred             CC----cHHHHHhhccCCEEEEEc
Q 023273          223 GQ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       223 g~----~~~~~~~l~~~G~~v~~g  242 (284)
                      ..    .+.+.++|+++|+++..-
T Consensus       119 ~~~~~~~~~~~~~LkpgG~lvi~~  142 (181)
T TIGR00138       119 ASLNVLLELTLNLLKVGGYFLAYK  142 (181)
T ss_pred             hCHHHHHHHHHHhcCCCCEEEEEc
Confidence            23    266788999999999764

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=94.93  E-value=0.15  Score=43.23  Aligned_cols=89  Identities=19%  Similarity=0.302  Sum_probs=60.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CCc---EEeeCCCcccc-cCCCcccEEEe
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD---LAIDYTKENIE-DLPEKFDVVFD  220 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~-~~~~~~d~vid  220 (284)
                      .++.+||-+|  ++.|..+..+++.  +.++++++.+++.++.+++.    +..   .++..+..++. ...+.+|+|+.
T Consensus        43 ~~~~~vLDiG--cG~G~~a~~la~~--g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~~~~~~fD~V~~  118 (255)
T PRK11036         43 PRPLRVLDAG--GGEGQTAIKLAEL--GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLETPVDLILF  118 (255)
T ss_pred             CCCCEEEEeC--CCchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhhhcCCCCCEEEe
Confidence            5567899888  4667788888875  78999999999988877642    211   22322222222 12457999985


Q ss_pred             CCC-----C----cHHHHHhhccCCEEEEE
Q 023273          221 AVG-----Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       221 ~~g-----~----~~~~~~~l~~~G~~v~~  241 (284)
                      ...     +    +..+.+.|+++|+++++
T Consensus       119 ~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~  148 (255)
T PRK11036        119 HAVLEWVADPKSVLQTLWSVLRPGGALSLM  148 (255)
T ss_pred             hhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence            432     2    36788999999999876

>PLN02780 ketoreductase/ oxidoreductase

Probab=94.93  E-value=0.066  Score=47.19  Aligned_cols=42  Identities=24%  Similarity=0.245  Sum_probs=36.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .|.+++|+||++++|.+.+...... |++|+++++++++.+.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~-G~~Vil~~R~~~~l~~~   93 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARK-GLNLVLVARNPDKLKDV   93 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHC-CCCEEEEECCHHHHHHH
Confidence            5889999999999999988777664 99999999998887655

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=94.93  E-value=0.11  Score=47.12  Aligned_cols=88  Identities=27%  Similarity=0.378  Sum_probs=57.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHH--cCCc---EEeeCCC-cccccCCCcccEEEeCCCCc-
Q 023273          154 ILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS--LGAD---LAIDYTK-ENIEDLPEKFDVVFDAVGQC-  225 (284)
Q Consensus       154 vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~--~g~~---~~~~~~~-~~~~~~~~~~d~vid~~g~~-  225 (284)
                      |+|+|+ |.+|..+++.+...... ++++.+++.++.+.+.+  .+..   ..+|..+ +.+.+.-++.|+||+|+|.+ 
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~   79 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF   79 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence            789997 99999999998875334 89999999999877754  2211   1233322 12344456789999999853 


Q ss_pred             --HHHHHhhccCCEEEEEc
Q 023273          226 --DKALKAVKEGGRVVSII  242 (284)
Q Consensus       226 --~~~~~~l~~~G~~v~~g  242 (284)
                        ..+..|+..+-.++..+
T Consensus        80 ~~~v~~~~i~~g~~yvD~~   98 (386)
T PF03435_consen   80 GEPVARACIEAGVHYVDTS   98 (386)
T ss_dssp             HHHHHHHHHHHT-EEEESS
T ss_pred             hHHHHHHHHHhCCCeeccc
Confidence              55666777788887743

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=94.91  E-value=0.09  Score=44.42  Aligned_cols=74  Identities=19%  Similarity=0.229  Sum_probs=48.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-cEEe--eCCC--cccccCC-CcccEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAI--DYTK--ENIEDLP-EKFDVVFDAV  222 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~--~~~~--~~~~~~~-~~~d~vid~~  222 (284)
                      ..+.+|+|+|++|.+|...+..+.. .|.+|+++.+++++.......+. ..++  |..+  ..+.+.. .++|++|.+.
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~   93 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLA-KGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT   93 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence            3467999999999999999988877 48999999988776543322111 1122  3222  1222222 5799999887


Q ss_pred             C
Q 023273          223 G  223 (284)
Q Consensus       223 g  223 (284)
                      |
T Consensus        94 g   94 (251)
T PLN00141         94 G   94 (251)
T ss_pred             C
Confidence            6

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=94.88  E-value=0.16  Score=42.37  Aligned_cols=40  Identities=23%  Similarity=0.314  Sum_probs=33.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD  190 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~  190 (284)
                      .+.+++|+|++|.+|...+...... |.+|++++++.++..
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~-g~~V~~~~r~~~~~~   44 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAAD-GAEVIVVDICGDDAA   44 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHH
Confidence            4678999999999999988888774 899999999866543

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=94.87  E-value=0.13  Score=44.58  Aligned_cols=90  Identities=20%  Similarity=0.216  Sum_probs=55.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHH-HcC----CcEEeeCCCcccccCCCcccEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLR-SLG----ADLAIDYTKENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~-~~g----~~~~~~~~~~~~~~~~~~~d~vid~~  222 (284)
                      ..+.+++|+| +|+.|.+++..+... |+ +++++.++.+|.+.+. ++.    ...+...+  ........+|+||+|+
T Consensus       125 ~~~k~vlIlG-aGGaaraia~aL~~~-G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~--~~~~~~~~aDiVInaT  200 (284)
T PRK12549        125 ASLERVVQLG-AGGAGAAVAHALLTL-GVERLTIFDVDPARAAALADELNARFPAARATAGS--DLAAALAAADGLVHAT  200 (284)
T ss_pred             ccCCEEEEEC-CcHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc--chHhhhCCCCEEEECC
Confidence            3568999999 899999998888875 65 7889999888876653 332    11222211  1122235799999996


Q ss_pred             CC-----c--HHHHHhhccCCEEEEEc
Q 023273          223 GQ-----C--DKALKAVKEGGRVVSII  242 (284)
Q Consensus       223 g~-----~--~~~~~~l~~~G~~v~~g  242 (284)
                      ..     .  ....+.+++...++.+-
T Consensus       201 p~Gm~~~~~~~~~~~~l~~~~~v~Div  227 (284)
T PRK12549        201 PTGMAKHPGLPLPAELLRPGLWVADIV  227 (284)
T ss_pred             cCCCCCCCCCCCCHHHcCCCcEEEEee
Confidence            31     1  11234566655554443

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=94.87  E-value=0.11  Score=44.82  Aligned_cols=73  Identities=29%  Similarity=0.452  Sum_probs=50.3

Q ss_pred             CCCCEEEEEcCCchHHHH-HHHHHHHhcCCeEEEEeCChhhHHHHH-H----cCC---cEEeeCCCcc--cccC---CCc
Q 023273          149 SAGKSILVLGGAGGVGTM-VIQLAKHVFGASKVAATSSTAKLDLLR-S----LGA---DLAIDYTKEN--IEDL---PEK  214 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~-a~~~a~~~~g~~vi~~~~~~~~~~~~~-~----~g~---~~~~~~~~~~--~~~~---~~~  214 (284)
                      +-|++.+|+||+.++|.+ |-++|+.  |.+++.+.|+.+|++..+ +    .+.   ..++|...++  ++++   ..+
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkr--G~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~  124 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKR--GFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG  124 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC
Confidence            457899999999999987 5566663  999999999999997773 2    221   1235554444  3332   233


Q ss_pred             --ccEEEeCCC
Q 023273          215 --FDVVFDAVG  223 (284)
Q Consensus       215 --~d~vid~~g  223 (284)
                        +-+.+|++|
T Consensus       125 ~~VgILVNNvG  135 (312)
T KOG1014|consen  125 LDVGILVNNVG  135 (312)
T ss_pred             CceEEEEeccc
Confidence              446788887

>PRK05650 short chain dehydrogenase; Provisional

Probab=94.85  E-value=0.17  Score=43.10  Aligned_cols=39  Identities=15%  Similarity=0.170  Sum_probs=32.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL  191 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~  191 (284)
                      ++++|+|++|++|...+..... .|.+|++++++.++.+.
T Consensus         1 ~~vlVtGasggIG~~la~~l~~-~g~~V~~~~r~~~~~~~   39 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAR-EGWRLALADVNEEGGEE   39 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHH
Confidence            3789999999999998888777 49999999988776543

>PRK07775 short chain dehydrogenase; Provisional

Probab=94.83  E-value=0.18  Score=43.18  Aligned_cols=41  Identities=17%  Similarity=0.233  Sum_probs=33.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL  191 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~  191 (284)
                      +..+++|+|++|.+|...++.+... |++|+++.++.++.+.
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~-G~~V~~~~r~~~~~~~   49 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAA-GFPVALGARRVEKCEE   49 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence            4568999999999999999888774 8999988887765543

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.81  E-value=0.095  Score=50.91  Aligned_cols=74  Identities=20%  Similarity=0.438  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh---------------------hHHHHHHcCCcEEeeCCC--
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA---------------------KLDLLRSLGADLAIDYTK--  205 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~---------------------~~~~~~~~g~~~~~~~~~--  205 (284)
                      ..+++|+|+| +|+.|++++..++.. |.+|++++..+.                     +.+.++++|.+...+..-  
T Consensus       325 ~~~~~VaIIG-aGpAGLsaA~~L~~~-G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~  402 (654)
T PRK12769        325 KSDKRVAIIG-AGPAGLACADVLARN-GVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGK  402 (654)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCC
Confidence            3588999999 899999999999985 999999987543                     244556667543333211  


Q ss_pred             -cccccCCCcccEEEeCCCC
Q 023273          206 -ENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       206 -~~~~~~~~~~d~vid~~g~  224 (284)
                       ..+.....++|.+|.++|.
T Consensus       403 ~i~~~~~~~~~DavilAtGa  422 (654)
T PRK12769        403 DISLESLLEDYDAVFVGVGT  422 (654)
T ss_pred             cCCHHHHHhcCCEEEEeCCC
Confidence             1112223579999998884

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=94.79  E-value=0.12  Score=44.73  Aligned_cols=73  Identities=26%  Similarity=0.335  Sum_probs=46.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHH-c----CCcEEeeCCCcccccCCCcccEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-L----GADLAIDYTKENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~-~----g~~~~~~~~~~~~~~~~~~~d~vid~~  222 (284)
                      ..+++++|+| +|+.+.+++..+... |+ +++++.++.+|.+.+.+ +    +...+...+..........+|+++|++
T Consensus       125 ~~~k~vlilG-aGGaarAi~~aL~~~-g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaT  202 (283)
T PRK14027        125 AKLDSVVQVG-AGGVGNAVAYALVTH-GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT  202 (283)
T ss_pred             cCCCeEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcC
Confidence            3478999999 799999888777765 64 78888898888766642 2    111111111011111234689999997


Q ss_pred             C
Q 023273          223 G  223 (284)
Q Consensus       223 g  223 (284)
                      .
T Consensus       203 p  203 (283)
T PRK14027        203 P  203 (283)
T ss_pred             C
Confidence            5

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.79  E-value=0.22  Score=39.57  Aligned_cols=95  Identities=25%  Similarity=0.274  Sum_probs=58.1

Q ss_pred             hcccchHHHHHHHHH-hcccCCCCEEEEEcCCch-HHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc
Q 023273          130 ASLPLATETAYEGLE-RSAFSAGKSILVLGGAGG-VGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN  207 (284)
Q Consensus       130 a~~~~~~~ta~~al~-~~~~~~g~~vlI~ga~g~-~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~  207 (284)
                      ...|+....+...++ ...--.+.+++|+| +|. +|..++..++.. |++++++.+..+.+                  
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG-~G~~~G~~~a~~L~~~-g~~V~v~~r~~~~l------------------   81 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVG-RSNIVGKPLAALLLNR-NATVTVCHSKTKNL------------------   81 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHHHhhC-CCEEEEEECCchhH------------------
Confidence            334544434444443 23346889999999 565 599888888874 88888777653211                  


Q ss_pred             cccCCCcccEEEeCCCCcHH-HHHhhccCCEEEEEcCCC
Q 023273          208 IEDLPEKFDVVFDAVGQCDK-ALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       208 ~~~~~~~~d~vid~~g~~~~-~~~~l~~~G~~v~~g~~~  245 (284)
                       .+.-..+|+||.+++.++. -.+.++++-.++.++.+.
T Consensus        82 -~~~l~~aDiVIsat~~~~ii~~~~~~~~~viIDla~pr  119 (168)
T cd01080          82 -KEHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINR  119 (168)
T ss_pred             -HHHHhhCCEEEEcCCCCceecHHHccCCeEEEEccCCC
Confidence             1223568899999886431 112455555566666554

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.79  E-value=0.27  Score=42.46  Aligned_cols=95  Identities=24%  Similarity=0.265  Sum_probs=65.1

Q ss_pred             cccchHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc
Q 023273          131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (284)
Q Consensus       131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (284)
                      ..||+.......++..+ --.|.+++|+|.+..+|.-++.++... +++|+++.+....                   +.
T Consensus       137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~-gatVtv~~s~t~~-------------------l~  196 (286)
T PRK14175        137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQK-NASVTILHSRSKD-------------------MA  196 (286)
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCCchh-------------------HH
Confidence            45665555555555444 357999999996666999999999984 8999988764321                   22


Q ss_pred             cCCCcccEEEeCCCCcH-HHHHhhccCCEEEEEcCCC
Q 023273          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       210 ~~~~~~d~vid~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (284)
                      +..+..|++|.++|.++ -.-+.++++..++.+|.+.
T Consensus       197 ~~~~~ADIVIsAvg~p~~i~~~~vk~gavVIDvGi~~  233 (286)
T PRK14175        197 SYLKDADVIVSAVGKPGLVTKDVVKEGAVIIDVGNTP  233 (286)
T ss_pred             HHHhhCCEEEECCCCCcccCHHHcCCCcEEEEcCCCc
Confidence            22467899999998641 1124678888788787654

>PLN02427 UDP-apiose/xylose synthase

Probab=94.77  E-value=0.13  Score=46.36  Aligned_cols=78  Identities=13%  Similarity=0.076  Sum_probs=50.2

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC------cEEeeCC---CcccccCCCccc
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA------DLAIDYT---KENIEDLPEKFD  216 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~------~~~~~~~---~~~~~~~~~~~d  216 (284)
                      ++..+..+|+|+||+|-+|...++.+...++.+|++++++.++...+...+.      ..++.-+   ...+.+.-+++|
T Consensus         9 ~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d   88 (386)
T PLN02427          9 GKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD   88 (386)
T ss_pred             CCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence            4445567899999999999988888776335889999887666554433221      1122111   112233345799


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      +||.+++
T Consensus        89 ~ViHlAa   95 (386)
T PLN02427         89 LTINLAA   95 (386)
T ss_pred             EEEEccc
Confidence            9999876

>PLN02396 hexaprenyldihydroxybenzoate methyltransferase

Probab=94.76  E-value=0.18  Score=44.49  Aligned_cols=91  Identities=21%  Similarity=0.238  Sum_probs=58.9

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC----C---cEEeeCCCcccccCCCcccEEEe
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG----A---DLAIDYTKENIEDLPEKFDVVFD  220 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g----~---~~~~~~~~~~~~~~~~~~d~vid  220 (284)
                      ..++.+||-+|+  +.|..+..+++.  +++|+.++.+++..+.++...    .   ..++..+.+++....+.||+|+.
T Consensus       129 ~~~g~~ILDIGC--G~G~~s~~La~~--g~~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~~dae~l~~~~~~FD~Vi~  204 (322)
T PLN02396        129 PFEGLKFIDIGC--GGGLLSEPLARM--GATVTGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLS  204 (322)
T ss_pred             CCCCCEEEEeeC--CCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCcccceeEEecCHHHhhhccCCCCEEEE
Confidence            356789999984  334456666653  889999999999888886421    1   11222222222222457999985


Q ss_pred             CC-----CC----cHHHHHhhccCCEEEEEc
Q 023273          221 AV-----GQ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       221 ~~-----g~----~~~~~~~l~~~G~~v~~g  242 (284)
                      ..     .+    .+.+.++|+++|.+++..
T Consensus       205 ~~vLeHv~d~~~~L~~l~r~LkPGG~liist  235 (322)
T PLN02396        205 LEVIEHVANPAEFCKSLSALTIPNGATVLST  235 (322)
T ss_pred             hhHHHhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            42     23    367888999999998764

>PRK08618 ornithine cyclodeaminase; Validated

Probab=94.76  E-value=0.5  Score=41.72  Aligned_cols=96  Identities=11%  Similarity=0.125  Sum_probs=61.3

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHH-Hc----CCcEEeeCCCcccccCCCcccE
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR-SL----GADLAIDYTKENIEDLPEKFDV  217 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~-~~----g~~~~~~~~~~~~~~~~~~~d~  217 (284)
                      +........++.|+| +|..|.+.+.......+ .++.++.+++++.+.+. ++    +.. +...  .+..+.-...|+
T Consensus       120 ~~la~~~~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~--~~~~~~~~~aDi  195 (325)
T PRK08618        120 KYLAREDAKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV--NSADEAIEEADI  195 (325)
T ss_pred             HHhcCCCCcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe--CCHHHHHhcCCE
Confidence            333345677899999 89999877655433235 46778888888765553 22    322 1111  122333467999


Q ss_pred             EEeCCCC--cHHHHHhhccCCEEEEEcCC
Q 023273          218 VFDAVGQ--CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       218 vid~~g~--~~~~~~~l~~~G~~v~~g~~  244 (284)
                      |+.|+++  +-.. ++++++-.++.+|.+
T Consensus       196 Vi~aT~s~~p~i~-~~l~~G~hV~~iGs~  223 (325)
T PRK08618        196 IVTVTNAKTPVFS-EKLKKGVHINAVGSF  223 (325)
T ss_pred             EEEccCCCCcchH-HhcCCCcEEEecCCC
Confidence            9999885  3344 888888888778764

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=94.73  E-value=0.19  Score=44.16  Aligned_cols=81  Identities=25%  Similarity=0.357  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC-C----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g-~----  224 (284)
                      .|+++.|+| .|.+|...+++++. +|.+|++.++.....    ..+.      ...++.+.....|+|.-+.. +    
T Consensus       144 ~gktvGIiG-~G~IG~~vA~~~~~-fgm~V~~~d~~~~~~----~~~~------~~~~l~ell~~sDvv~lh~Plt~~T~  211 (311)
T PRK08410        144 KGKKWGIIG-LGTIGKRVAKIAQA-FGAKVVYYSTSGKNK----NEEY------ERVSLEELLKTSDIISIHAPLNEKTK  211 (311)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhh-cCCEEEEECCCcccc----ccCc------eeecHHHHhhcCCEEEEeCCCCchhh
Confidence            688999999 99999999999999 599999998753211    1111      11134444566888876654 1    


Q ss_pred             ---cHHHHHhhccCCEEEEEc
Q 023273          225 ---CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g  242 (284)
                         -...+..|+++..+|-++
T Consensus       212 ~li~~~~~~~Mk~~a~lIN~a  232 (311)
T PRK08410        212 NLIAYKELKLLKDGAILINVG  232 (311)
T ss_pred             cccCHHHHHhCCCCeEEEECC
Confidence               178899999999888775

>PRK06523 short chain dehydrogenase; Provisional

Probab=94.73  E-value=0.13  Score=43.37  Aligned_cols=38  Identities=34%  Similarity=0.518  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      .+++++|+|++|++|...++..... |++|+++.+++++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~r~~~~   45 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEA-GARVVTTARSRPD   45 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHC-CCEEEEEeCChhh
Confidence            5789999999999999998888874 9999999887543

>PLN02336 phosphoethanolamine N-methyltransferase

Probab=94.71  E-value=0.41  Score=44.60  Aligned_cols=95  Identities=18%  Similarity=0.188  Sum_probs=62.2

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc--CCc---EEeeCCCcccccCCCcccEEE
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL--GAD---LAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~--g~~---~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      ...++++++||-+| +|. |..+..+++.. +++++.++.+++..+.+++.  +..   .+...+.....-..+.||+|+
T Consensus       261 ~~~~~~~~~vLDiG-cG~-G~~~~~la~~~-~~~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~  337 (475)
T PLN02336        261 KLDLKPGQKVLDVG-CGI-GGGDFYMAENF-DVHVVGIDLSVNMISFALERAIGRKCSVEFEVADCTKKTYPDNSFDVIY  337 (475)
T ss_pred             hcCCCCCCEEEEEe-ccC-CHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhhcCCCceEEEEcCcccCCCCCCCEEEEE
Confidence            34567889999999 443 66677788874 88999999998888777542  211   111111111111134699998


Q ss_pred             eCCC-----C----cHHHHHhhccCCEEEEEc
Q 023273          220 DAVG-----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       220 d~~g-----~----~~~~~~~l~~~G~~v~~g  242 (284)
                      ....     +    +..+.+.|+++|++++..
T Consensus       338 s~~~l~h~~d~~~~l~~~~r~LkpgG~l~i~~  369 (475)
T PLN02336        338 SRDTILHIQDKPALFRSFFKWLKPGGKVLISD  369 (475)
T ss_pred             ECCcccccCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            7422     2    268889999999998764

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=94.70  E-value=0.11  Score=43.17  Aligned_cols=68  Identities=25%  Similarity=0.361  Sum_probs=51.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh--hHHHHHHcCCcEEeeCCCc---ccccCCCcccEEEeCCC
Q 023273          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLGADLAIDYTKE---NIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~--~~~~~~~~g~~~~~~~~~~---~~~~~~~~~d~vid~~g  223 (284)
                      |+|+|++|.+|...++.+.. .+.+|.++.+++.  +...++..|...+ .-+-+   .+.+.-+|+|.||.+.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~-~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~~~~l~~al~g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLS-AGFSVRALVRDPSSDRAQQLQALGAEVV-EADYDDPESLVAALKGVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHH-TTGCEEEEESSSHHHHHHHHHHTTTEEE-ES-TT-HHHHHHHHTTCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHh-CCCCcEEEEeccchhhhhhhhcccceEe-ecccCCHHHHHHHHcCCceEEeecC
Confidence            78999999999999999998 5999999999764  3556677887533 32222   23333579999999887

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.69  E-value=0.11  Score=44.84  Aligned_cols=79  Identities=24%  Similarity=0.318  Sum_probs=56.0

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEE---eeCCCccc------------
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLA---IDYTKENI------------  208 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~------------  208 (284)
                      ..+.++-.+++|+|++.++|++.+..++.. |.+|.++.++.+|+..++ +++....   +.+...+.            
T Consensus        27 ~~~~k~~~hi~itggS~glgl~la~e~~~~-ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~  105 (331)
T KOG1210|consen   27 IVKPKPRRHILITGGSSGLGLALALECKRE-GADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEE  105 (331)
T ss_pred             hcccCccceEEEecCcchhhHHHHHHHHHc-cCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhh
Confidence            345566689999999999999999999984 999999999999988774 4442111   11211111            


Q ss_pred             -ccCCCcccEEEeCCCC
Q 023273          209 -EDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       209 -~~~~~~~d~vid~~g~  224 (284)
                       ++....+|.+|.|+|.
T Consensus       106 l~~~~~~~d~l~~cAG~  122 (331)
T KOG1210|consen  106 LRDLEGPIDNLFCCAGV  122 (331)
T ss_pred             hhhccCCcceEEEecCc
Confidence             1113468999999883

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=94.69  E-value=0.16  Score=44.52  Aligned_cols=73  Identities=22%  Similarity=0.273  Sum_probs=47.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CC---cEEeeCC---CcccccCCCcccEEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA---DLAIDYT---KENIEDLPEKFDVVF  219 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~---~~~~~~~---~~~~~~~~~~~d~vi  219 (284)
                      .|++|+|+|++|.+|...+..+... |.+|+++.++.++.+.+..+    +.   -.++..+   ...+.+.-+++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   82 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLR-GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF   82 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence            5789999999999999988888774 89999888876543332221    11   1122111   112223345799999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      .+++
T Consensus        83 h~A~   86 (322)
T PLN02986         83 HTAS   86 (322)
T ss_pred             EeCC
Confidence            9876

>PRK12743 oxidoreductase; Provisional

Probab=94.68  E-value=0.21  Score=42.20  Aligned_cols=72  Identities=17%  Similarity=0.175  Sum_probs=45.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH----HHcCCc-EEe--eCCC-ccccc-------CCCc
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGAD-LAI--DYTK-ENIED-------LPEK  214 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~----~~~g~~-~~~--~~~~-~~~~~-------~~~~  214 (284)
                      +++++|+|+++++|..+++.+... |++|+++.+ +.++.+.+    +..+.. ..+  |-.+ +....       ..+.
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQ-GFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999988884 999988765 43333322    334432 222  2211 11111       1246


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++|.++|
T Consensus        81 id~li~~ag   89 (256)
T PRK12743         81 IDVLVNNAG   89 (256)
T ss_pred             CCEEEECCC
Confidence            899999887

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.63  E-value=0.25  Score=40.42  Aligned_cols=67  Identities=22%  Similarity=0.256  Sum_probs=47.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeCCCcccccCCCcccEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~d~vid~~  222 (284)
                      -.|++++|.| .|.+|..+++.+... |.+|++.+.++++.+.+++ ++.. .++..+  +.  ...+|+++-|+
T Consensus        26 l~gk~v~I~G-~G~vG~~~A~~L~~~-G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~--l~--~~~~Dv~vp~A   93 (200)
T cd01075          26 LEGKTVAVQG-LGKVGYKLAEHLLEE-GAKLIVADINEEAVARAAELFGAT-VVAPEE--IY--SVDADVFAPCA   93 (200)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHcCCE-EEcchh--hc--cccCCEEEecc
Confidence            4678999999 799999999999984 9999999998888776654 3543 333211  11  12577777554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK08219 short chain dehydrogenase; Provisional

Probab=94.62  E-value=0.21  Score=41.09  Aligned_cols=71  Identities=17%  Similarity=0.265  Sum_probs=47.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeCCCc---ccccC---CCcccEEEeCCC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKE---NIEDL---PEKFDVVFDAVG  223 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~---~~~~~---~~~~d~vid~~g  223 (284)
                      .++++|+|++|.+|...+..+.. . .+|++++++.++.+.+.+ ....+++..+-.   .+...   -+++|.+|.++|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~-~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   80 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAP-T-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG   80 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHh-h-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            36899999999999999888877 4 889999998777655543 211222222111   11111   136999999887

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.59  E-value=0.17  Score=39.93  Aligned_cols=73  Identities=22%  Similarity=0.367  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh-hhHHHHHHcCCcEEeeCCC----ccccc----C---CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLAIDYTK----ENIED----L---PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~~~~~~~g~~~~~~~~~----~~~~~----~---~~~~d~  217 (284)
                      .|-.-+|+|+++++|.++++..... |+.++.++... ...+.++++|...++...+    .+...    .   -+..|+
T Consensus         8 kglvalvtggasglg~ataerlakq-gasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQ-GASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhc-CceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            4555689999999999988877764 89999999744 4567778999765554322    11111    1   346899


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      .++|+|
T Consensus        87 ~vncag   92 (260)
T KOG1199|consen   87 LVNCAG   92 (260)
T ss_pred             eeeccc
Confidence            999988

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=94.58  E-value=0.19  Score=44.69  Aligned_cols=76  Identities=21%  Similarity=0.193  Sum_probs=49.2

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-Hc--CC-cEEeeCC---CcccccCCCcccEEE
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL--GA-DLAIDYT---KENIEDLPEKFDVVF  219 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~--g~-~~~~~~~---~~~~~~~~~~~d~vi  219 (284)
                      +-..+.+|||+|++|.+|...++.+... |.+|++++++.++...+. .+  +. -.++..+   .+.+.+..+++|+||
T Consensus         6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (353)
T PLN02896          6 RESATGTYCVTGATGYIGSWLVKLLLQR-GYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVF   84 (353)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence            3456789999999999999999988874 999999888766544332 22  11 1122211   111222234689999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      .+++
T Consensus        85 h~A~   88 (353)
T PLN02896         85 HVAA   88 (353)
T ss_pred             ECCc
Confidence            8875

>PRK13256 thiopurine S-methyltransferase; Reviewed

Probab=94.57  E-value=1  Score=37.59  Aligned_cols=94  Identities=11%  Similarity=0.073  Sum_probs=61.6

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCc-----------------EEeeCCCcc
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-----------------LAIDYTKEN  207 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~-----------------~~~~~~~~~  207 (284)
                      ....++.+|+|.| | +-|.-+..+|..  |.+|+.++.++.-.+.+.+ .+..                 .++.-+--.
T Consensus        39 l~~~~~~rvLvPg-C-Gkg~D~~~LA~~--G~~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~  114 (226)
T PRK13256         39 LNINDSSVCLIPM-C-GCSIDMLFFLSK--GVKVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFN  114 (226)
T ss_pred             cCCCCCCeEEEeC-C-CChHHHHHHHhC--CCcEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcC
Confidence            3445678999998 4 457778888875  9999999999988777633 2211                 111111111


Q ss_pred             cc---cCCCcccEEEeCCC--C--c-------HHHHHhhccCCEEEEEcC
Q 023273          208 IE---DLPEKFDVVFDAVG--Q--C-------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       208 ~~---~~~~~~d~vid~~g--~--~-------~~~~~~l~~~G~~v~~g~  243 (284)
                      +.   +..+.+|.|+|.+-  .  +       +.+.++|+++|+++.+..
T Consensus       115 l~~~~~~~~~fD~VyDra~~~Alpp~~R~~Y~~~l~~lL~pgg~llll~~  164 (226)
T PRK13256        115 LPKIANNLPVFDIWYDRGAYIALPNDLRTNYAKMMLEVCSNNTQILLLVM  164 (226)
T ss_pred             CCccccccCCcCeeeeehhHhcCCHHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence            11   11246999999754  2  1       578889999999988754

>TIGR00477 tehB tellurite resistance protein TehB

Probab=94.55  E-value=0.3  Score=39.72  Aligned_cols=91  Identities=21%  Similarity=0.202  Sum_probs=56.9

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-EEeeCCCcccccCCCcccEEEe
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVVFD  220 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~d~vid  220 (284)
                      ....++.+||-+|+  +.|..+..+++.  +.+|++++.+++-.+.+++    .+.. .....+.... ...+.+|+|+.
T Consensus        26 ~~~~~~~~vLDiGc--G~G~~a~~la~~--g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~  100 (195)
T TIGR00477        26 VKTVAPCKTLDLGC--GQGRNSLYLSLA--GYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINAA-ALNEDYDFIFS  100 (195)
T ss_pred             hccCCCCcEEEeCC--CCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchhc-cccCCCCEEEE
Confidence            34455678999983  667788888874  7899999999887766543    2221 1111111111 12356999986


Q ss_pred             CCC----C-------cHHHHHhhccCCEEEEE
Q 023273          221 AVG----Q-------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       221 ~~g----~-------~~~~~~~l~~~G~~v~~  241 (284)
                      +.-    +       ...+.+.|+++|+++.+
T Consensus       101 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~  132 (195)
T TIGR00477       101 TVVFMFLQAGRVPEIIANMQAHTRPGGYNLIV  132 (195)
T ss_pred             ecccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence            521    1       25778889999996555

Part of a tellurite-reducing operon tehA and tehB

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.54  E-value=0.18  Score=42.71  Aligned_cols=35  Identities=23%  Similarity=0.297  Sum_probs=29.0

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       150 ~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      .+++++|+|++  +++|.+.++..... |++|+++.++
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~-G~~v~~~~r~   42 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNA-GAKLVFTYAG   42 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEecCc
Confidence            57899999986  79999988877774 9999988654

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=94.52  E-value=0.13  Score=46.63  Aligned_cols=42  Identities=24%  Similarity=0.342  Sum_probs=35.4

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      .+...+.+|+|+|++|.+|..+++.+... |.+|++++++..+
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~-G~~V~~l~R~~~~   96 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRR-GYNVVAVAREKSG   96 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEEechhh
Confidence            44566789999999999999999888874 9999999987654

>PRK06128 oxidoreductase; Provisional

Probab=94.51  E-value=0.21  Score=43.42  Aligned_cols=36  Identities=19%  Similarity=0.272  Sum_probs=30.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      ..++++||+|++|++|.+.++..... |++|+++.++
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~-G~~V~i~~~~   88 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFARE-GADIALNYLP   88 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHc-CCEEEEEeCC
Confidence            35789999999999999988888874 9998887654

>PRK07340 ornithine cyclodeaminase; Validated

Probab=94.51  E-value=0.22  Score=43.53  Aligned_cols=97  Identities=16%  Similarity=0.090  Sum_probs=60.5

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHH-HcCCcEEeeCCCcccccCCCcccEEEeCCC
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      .......+++|+| +|..|.+.+......++ .++.+..+++++.+.+. ++... .+.....+..+.-.+.|+|+.|+.
T Consensus       120 La~~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~-~~~~~~~~~~~av~~aDiVitaT~  197 (304)
T PRK07340        120 LAPAPPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARAL-GPTAEPLDGEAIPEAVDLVVTATT  197 (304)
T ss_pred             hCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc-CCeeEECCHHHHhhcCCEEEEccC
Confidence            3335677999999 89999998888765345 46888888888766553 33211 000001223333468999999988


Q ss_pred             CcH-HHHHhhccCCEEEEEcCC
Q 023273          224 QCD-KALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       224 ~~~-~~~~~l~~~G~~v~~g~~  244 (284)
                      +.+ ..-..++++-.+..+|.+
T Consensus       198 s~~Pl~~~~~~~g~hi~~iGs~  219 (304)
T PRK07340        198 SRTPVYPEAARAGRLVVAVGAF  219 (304)
T ss_pred             CCCceeCccCCCCCEEEecCCC
Confidence            521 111136777777777754

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=94.48  E-value=0.46  Score=39.40  Aligned_cols=91  Identities=18%  Similarity=0.161  Sum_probs=58.7

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcE-----------------EeeCCCccc
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-----------------AIDYTKENI  208 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-----------------~~~~~~~~~  208 (284)
                      ...++.+||+.|  .+.|.-++.+|..  |++|++++.++.-++.+ ++.+...                 ++..+-..+
T Consensus        34 ~~~~~~rvL~~g--CG~G~da~~LA~~--G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l  109 (218)
T PRK13255         34 ALPAGSRVLVPL--CGKSLDMLWLAEQ--GHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL  109 (218)
T ss_pred             CCCCCCeEEEeC--CCChHhHHHHHhC--CCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC
Confidence            445678999998  4678888888874  99999999999877765 2332110                 011111111


Q ss_pred             cc-CCCcccEEEeCCC--C---------cHHHHHhhccCCEEEEE
Q 023273          209 ED-LPEKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       209 ~~-~~~~~d~vid~~g--~---------~~~~~~~l~~~G~~v~~  241 (284)
                      .. ....+|.|+|...  .         ...+.++|+++|++.++
T Consensus       110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~  154 (218)
T PRK13255        110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV  154 (218)
T ss_pred             CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence            11 1246899999653  1         26788999999975543

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.47  E-value=0.17  Score=44.37  Aligned_cols=94  Identities=19%  Similarity=0.270  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcC----CcEEe--eCCCcccc----------cC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLG----ADLAI--DYTKENIE----------DL  211 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g----~~~~~--~~~~~~~~----------~~  211 (284)
                      ..+.+++|+|+++++|..+++-.... |++|+...++.++.+.++ ++.    ...+.  .-+-.+..          ..
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~-Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~  111 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALR-GAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK  111 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence            45689999999999999988887774 899999999987766553 222    22221  11111111          12


Q ss_pred             CCcccEEEeCCCCc--------------------------HHHHHhhccC--CEEEEEcC
Q 023273          212 PEKFDVVFDAVGQC--------------------------DKALKAVKEG--GRVVSIIG  243 (284)
Q Consensus       212 ~~~~d~vid~~g~~--------------------------~~~~~~l~~~--G~~v~~g~  243 (284)
                      ....|+.|+++|-.                          +.++..|+..  +|+|.++.
T Consensus       112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS  171 (314)
T KOG1208|consen  112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSS  171 (314)
T ss_pred             CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcC
Confidence            45789999888720                          3456666655  89999865

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=94.46  E-value=0.18  Score=44.22  Aligned_cols=73  Identities=21%  Similarity=0.263  Sum_probs=47.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH---c-CC---cEEe--eCC-CcccccCCCcccEEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS---L-GA---DLAI--DYT-KENIEDLPEKFDVVF  219 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~---~-g~---~~~~--~~~-~~~~~~~~~~~d~vi  219 (284)
                      .++++||+|++|.+|...+..+... |++|++++++.++......   . +.   ...+  |-. .+.+.+.-+++|++|
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   82 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFR-GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF   82 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence            4789999999999999999888874 9999888876654332211   1 11   1122  211 112223334689999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      .+++
T Consensus        83 h~A~   86 (325)
T PLN02989         83 HTAS   86 (325)
T ss_pred             EeCC
Confidence            9886

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=94.42  E-value=0.2  Score=43.89  Aligned_cols=73  Identities=21%  Similarity=0.324  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH---HHHHHcC-C-c--EEeeCC---CcccccCCCcccEEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL---DLLRSLG-A-D--LAIDYT---KENIEDLPEKFDVVF  219 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~---~~~~~~g-~-~--~~~~~~---~~~~~~~~~~~d~vi  219 (284)
                      .+..|+|+||+|-+|.+.+..+... |+.|..++|++++.   +.++++. + +  .++..+   .+.+.+.-.|+|.||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~r-GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf   83 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSR-GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF   83 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhC-CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence            6789999999999999999999994 99999999987763   3455554 1 1  122211   222444456899999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      .++.
T Consensus        84 H~As   87 (327)
T KOG1502|consen   84 HTAS   87 (327)
T ss_pred             EeCc
Confidence            8764

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=94.40  E-value=0.3  Score=41.26  Aligned_cols=100  Identities=26%  Similarity=0.356  Sum_probs=61.0

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHH----HcCCcE---EeeCC--Ccccc-cC
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGADL---AIDYT--KENIE-DL  211 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~----~~g~~~---~~~~~--~~~~~-~~  211 (284)
                      +...++.||++|+-.|  .+.|.++..+++..+ ..+|+..+..+++.+.++    .+|...   +.+.+  .+.+. ..
T Consensus        33 ~~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~~  110 (247)
T PF08704_consen   33 LMRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEEL  110 (247)
T ss_dssp             HHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT-
T ss_pred             HHHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccccccc
Confidence            3568999999999988  355667777777652 358999999999887774    455322   12221  11121 12


Q ss_pred             CCcccEEE-eCCCC---cHHHHHhh-ccCCEEEEEcCC
Q 023273          212 PEKFDVVF-DAVGQ---CDKALKAV-KEGGRVVSIIGS  244 (284)
Q Consensus       212 ~~~~d~vi-d~~g~---~~~~~~~l-~~~G~~v~~g~~  244 (284)
                      ...+|.|| |--.-   ...+.+.| +++|+++.+.-+
T Consensus       111 ~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP~  148 (247)
T PF08704_consen  111 ESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSPC  148 (247)
T ss_dssp             TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEESS
T ss_pred             cCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCC
Confidence            35688764 54332   37888999 899999988643

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.40  E-value=0.23  Score=41.57  Aligned_cols=39  Identities=23%  Similarity=0.313  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEE-eCChhhH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKL  189 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~  189 (284)
                      ++.+++|+|++|.+|...+...... |+++++. .++.++.
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~-g~~v~~~~~r~~~~~   42 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEE-GYDIAVNYARSRKAA   42 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHH
Confidence            4679999999999999999888884 8888764 5555554

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.37  E-value=0.43  Score=42.25  Aligned_cols=82  Identities=20%  Similarity=0.308  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC----  225 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~----  225 (284)
                      .|.+|.|+| .|.+|...++.++. +|.+|++.++++++......        . ..++.+..+..|+|+-+....    
T Consensus       145 ~g~~VgIIG-~G~IG~~vA~~L~~-~G~~V~~~d~~~~~~~~~~~--------~-~~~l~ell~~aDiVil~lP~t~~t~  213 (330)
T PRK12480        145 KNMTVAIIG-TGRIGAATAKIYAG-FGATITAYDAYPNKDLDFLT--------Y-KDSVKEAIKDADIISLHVPANKESY  213 (330)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEEeCChhHhhhhhh--------c-cCCHHHHHhcCCEEEEeCCCcHHHH
Confidence            577999999 89999999999998 49999999987654321100        1 112334456789998887631    


Q ss_pred             ----HHHHHhhccCCEEEEEc
Q 023273          226 ----DKALKAVKEGGRVVSII  242 (284)
Q Consensus       226 ----~~~~~~l~~~G~~v~~g  242 (284)
                          ...+..|+++..+|.++
T Consensus       214 ~li~~~~l~~mk~gavlIN~a  234 (330)
T PRK12480        214 HLFDKAMFDHVKKGAILVNAA  234 (330)
T ss_pred             HHHhHHHHhcCCCCcEEEEcC
Confidence                46677888888777665

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=94.35  E-value=0.27  Score=41.61  Aligned_cols=41  Identities=17%  Similarity=0.398  Sum_probs=32.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLD  190 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~  190 (284)
                      ..+++++|+|+++++|.+.+...... |++|+++.+ ++++.+
T Consensus         6 l~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~~~~~~~~~   47 (260)
T PRK08416          6 MKGKTLVISGGTRGIGKAIVYEFAQS-GVNIAFTYNSNVEEAN   47 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHH
Confidence            35789999999999999988887774 999887754 444443

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.35  E-value=0.17  Score=42.25  Aligned_cols=41  Identities=32%  Similarity=0.490  Sum_probs=33.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEE-eCChhhHHHH
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL  192 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~~~~  192 (284)
                      +++++|+|++|.+|...+..+... |++++++ .+++++.+.+
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~-g~~v~~~~~r~~~~~~~~   46 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKE-GAKVVIAYDINEEAAQEL   46 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHH
Confidence            568999999999999988877774 8999988 8877665443

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=94.35  E-value=0.2  Score=42.53  Aligned_cols=34  Identities=26%  Similarity=0.179  Sum_probs=27.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeC
Q 023273          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATS  184 (284)
Q Consensus       150 ~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~  184 (284)
                      .+++++|+|++  +++|.+.++..... |++|++..+
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~-G~~v~~~~~   40 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAA-GAELGITYL   40 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEEec
Confidence            47899999975  79999988887774 999887754

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.32  E-value=0.023  Score=52.51  Aligned_cols=82  Identities=26%  Similarity=0.424  Sum_probs=58.6

Q ss_pred             HhcccCCCCEEE----EEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCccc-EE
Q 023273          144 ERSAFSAGKSIL----VLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFD-VV  218 (284)
Q Consensus       144 ~~~~~~~g~~vl----I~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d-~v  218 (284)
                      ...+.++|+.++    ++|++|++|.+++++++.. |..|+.+...+++....+.                  .+++ ++
T Consensus        27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~------------------~~~~~~~   87 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGL-GYDVVANNDGGLTWAAGWG------------------DRFGALV   87 (450)
T ss_pred             cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhC-CCeeeecCccccccccCcC------------------CcccEEE
Confidence            346778888888    8888999999999999996 9999987765552221111                  2344 45


Q ss_pred             EeCCCC------------cHHHHHhhccCCEEEEEcCC
Q 023273          219 FDAVGQ------------CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       219 id~~g~------------~~~~~~~l~~~G~~v~~g~~  244 (284)
                      +|..+-            ....++.|.++|+++.++..
T Consensus        88 ~d~~~~~~~~~l~~~~~~~~~~l~~l~~~griv~i~s~  125 (450)
T PRK08261         88 FDATGITDPADLKALYEFFHPVLRSLAPCGRVVVLGRP  125 (450)
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEEccc
Confidence            555441            15678888999999998754

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.31  E-value=0.23  Score=42.21  Aligned_cols=73  Identities=25%  Similarity=0.389  Sum_probs=44.0

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHhcCCeEEEEeCC---hhhHHHH-HHcCCcEEe--eCCC-cccccC-------CC
Q 023273          150 AGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATSS---TAKLDLL-RSLGADLAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga--~g~~G~~a~~~a~~~~g~~vi~~~~~---~~~~~~~-~~~g~~~~~--~~~~-~~~~~~-------~~  213 (284)
                      .+++++|+|+  ++++|++.++..... |++|+++.+.   +++.+.+ ++++....+  |-.+ +...+.       .+
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKRE-GAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHC-CCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            5789999996  579999988777764 8999887543   3333333 334432222  2111 111111       25


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      .+|++++++|
T Consensus        84 ~iD~lvnnAG   93 (260)
T PRK06997         84 GLDGLVHSIG   93 (260)
T ss_pred             CCcEEEEccc
Confidence            7999998875

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=94.31  E-value=0.13  Score=45.70  Aligned_cols=72  Identities=22%  Similarity=0.146  Sum_probs=45.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC----cccccCCCcccEEEeCCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK----ENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~d~vid~~g  223 (284)
                      ++|+|+|++|-+|...+..+....+.+|++++++.++...+.....-+++..+-    ..+.+..+++|+||.+++
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa   77 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVA   77 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcc
Confidence            479999999999999888877633689999988665544332211112222111    112223457999998764

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=94.31  E-value=0.15  Score=39.40  Aligned_cols=85  Identities=19%  Similarity=0.286  Sum_probs=53.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC-------CCccc--ccCCCcccEEEeCCCC
Q 023273          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY-------TKENI--EDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~-------~~~~~--~~~~~~~d~vid~~g~  224 (284)
                      |+|+| +|.+|...+..++.. +.+|..+.+++ +.+..++.|.......       .....  ....+.+|++|-|+-+
T Consensus         1 I~I~G-~GaiG~~~a~~L~~~-g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa   77 (151)
T PF02558_consen    1 ILIIG-AGAIGSLYAARLAQA-GHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKA   77 (151)
T ss_dssp             EEEES-TSHHHHHHHHHHHHT-TCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSG
T ss_pred             CEEEC-cCHHHHHHHHHHHHC-CCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEecc
Confidence            68899 899998877777664 99999999988 7777776653211111       00000  1124679999999864


Q ss_pred             --cHH----HHHhhccCCEEEEE
Q 023273          225 --CDK----ALKAVKEGGRVVSI  241 (284)
Q Consensus       225 --~~~----~~~~l~~~G~~v~~  241 (284)
                        ...    +...+.++..++.+
T Consensus        78 ~~~~~~l~~l~~~~~~~t~iv~~  100 (151)
T PF02558_consen   78 YQLEQALQSLKPYLDPNTTIVSL  100 (151)
T ss_dssp             GGHHHHHHHHCTGEETTEEEEEE
T ss_pred             cchHHHHHHHhhccCCCcEEEEE
Confidence              233    44444555566655

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.31  E-value=0.28  Score=42.22  Aligned_cols=94  Identities=26%  Similarity=0.273  Sum_probs=64.5

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc
Q 023273          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (284)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (284)
                      ..||+.......++..++ -.|.+|+|+|.+..+|.-.+.++... ++.|.++-.....+                   .
T Consensus       136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~-gAtVtv~hs~t~~l-------------------~  195 (285)
T PRK14191        136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNA-GASVSVCHILTKDL-------------------S  195 (285)
T ss_pred             CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCEEEEEeCCcHHH-------------------H
Confidence            346665555555555444 47999999997779999999999884 88888774432221                   2


Q ss_pred             cCCCcccEEEeCCCCcH-HHHHhhccCCEEEEEcCC
Q 023273          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       210 ~~~~~~d~vid~~g~~~-~~~~~l~~~G~~v~~g~~  244 (284)
                      +..+..|+++.++|.++ ---+.++++..++.+|..
T Consensus       196 ~~~~~ADIvV~AvG~p~~i~~~~vk~GavVIDvGi~  231 (285)
T PRK14191        196 FYTQNADIVCVGVGKPDLIKASMVKKGAVVVDIGIN  231 (285)
T ss_pred             HHHHhCCEEEEecCCCCcCCHHHcCCCcEEEEeecc
Confidence            22356899999998642 223567888888888854

>PRK08703 short chain dehydrogenase; Provisional

Probab=94.31  E-value=0.13  Score=42.89  Aligned_cols=42  Identities=29%  Similarity=0.453  Sum_probs=35.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+.+++|+|++|++|...++..... |.+|+++.+++++.+.+
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~-g~~V~~~~r~~~~~~~~   46 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAA-GATVILVARHQKKLEKV   46 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCChHHHHHH
Confidence            5679999999999999998888874 99999999988766544

>PRK05599 hypothetical protein; Provisional

Probab=94.30  E-value=0.25  Score=41.54  Aligned_cols=70  Identities=24%  Similarity=0.370  Sum_probs=45.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCc--EEeeCC--C-ccccc-------CCCcc
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD--LAIDYT--K-ENIED-------LPEKF  215 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~--~~~~~~--~-~~~~~-------~~~~~  215 (284)
                      ++++|+|+++++|.+.++... . |.+|+++.+++++.+.+    ++.+..  ..+..+  + +....       ..+.+
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~-g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-H-GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            368999999999999888765 3 89999999988776544    233322  222211  1 11111       13579


Q ss_pred             cEEEeCCC
Q 023273          216 DVVFDAVG  223 (284)
Q Consensus       216 d~vid~~g  223 (284)
                      |++++++|
T Consensus        79 d~lv~nag   86 (246)
T PRK05599         79 SLAVVAFG   86 (246)
T ss_pred             CEEEEecC
Confidence            99998877

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=94.30  E-value=0.13  Score=43.08  Aligned_cols=45  Identities=22%  Similarity=0.332  Sum_probs=37.3

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      ...++.+++|+|++|.+|...++..... |++|++++++.++.+.+
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~-G~~Vi~~~r~~~~~~~~   52 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARH-GATVILLGRTEEKLEAV   52 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHC-CCcEEEEeCCHHHHHHH
Confidence            3557899999999999999999888874 89999999987665443

>PRK05855 short chain dehydrogenase; Validated

Probab=94.28  E-value=0.2  Score=47.49  Aligned_cols=73  Identities=26%  Similarity=0.318  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCCc-cccc-------CCCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTKE-NIED-------LPEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~~-~~~~-------~~~~  214 (284)
                      .+.+++|+||+|++|...++.+... |.+|+++.++.++.+.+.    ..|.. ..+  |-.+. ....       ..+.
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFARE-GAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999999999999988887774 999999999877765442    23321 122  21111 1111       1346


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++++++|
T Consensus       393 id~lv~~Ag  401 (582)
T PRK05855        393 PDIVVNNAG  401 (582)
T ss_pred             CcEEEECCc
Confidence            999999987

>PRK00811 spermidine synthase; Provisional

Probab=94.26  E-value=0.25  Score=42.77  Aligned_cols=92  Identities=20%  Similarity=0.259  Sum_probs=57.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC--------c---EEeeCCCcc-cccCCCccc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA--------D---LAIDYTKEN-IEDLPEKFD  216 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~--------~---~~~~~~~~~-~~~~~~~~d  216 (284)
                      .+.++||++|+  +.|..+..+++.....+|.+++.+++-.+.+++.-.        +   +++..+... +....+.+|
T Consensus        75 ~~p~~VL~iG~--G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yD  152 (283)
T PRK00811         75 PNPKRVLIIGG--GDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFD  152 (283)
T ss_pred             CCCCEEEEEec--CchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCccc
Confidence            35678999993  446677777776224589999999998888875321        0   111111111 122245799


Q ss_pred             EEEeCCCC-------------cHHHHHhhccCCEEEEEc
Q 023273          217 VVFDAVGQ-------------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       217 ~vid~~g~-------------~~~~~~~l~~~G~~v~~g  242 (284)
                      +||.-...             ++.+.++|+++|.++.-.
T Consensus       153 vIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~  191 (283)
T PRK00811        153 VIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS  191 (283)
T ss_pred             EEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence            98753211             157789999999998753

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=94.20  E-value=0.22  Score=48.55  Aligned_cols=42  Identities=29%  Similarity=0.381  Sum_probs=35.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|++|++|.+.++..... |++|++++++.++.+..
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~-Ga~Vvi~~r~~~~~~~~  454 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAE-GAHVVLADLNLEAAEAV  454 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999998888874 99999999987766544

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=94.20  E-value=0.17  Score=44.63  Aligned_cols=74  Identities=22%  Similarity=0.231  Sum_probs=46.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHH-HcCC--cEEe--eCCC-cccccCCCcccEEEeCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR-SLGA--DLAI--DYTK-ENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~-~~g~--~~~~--~~~~-~~~~~~~~~~d~vid~~  222 (284)
                      .+.+|+|+|++|.+|...++.+...+ +.+|+++++++.+...+. .+..  ...+  |-.+ +.+.+.-+++|+||.++
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A   82 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA   82 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence            46899999999999999888877642 267888887665543332 2221  1122  2111 12222235699999987


Q ss_pred             C
Q 023273          223 G  223 (284)
Q Consensus       223 g  223 (284)
                      |
T Consensus        83 g   83 (324)
T TIGR03589        83 A   83 (324)
T ss_pred             c
Confidence            6

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=94.18  E-value=0.16  Score=43.05  Aligned_cols=39  Identities=31%  Similarity=0.441  Sum_probs=32.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL  189 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~  189 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~-G~~v~~~~~~~~~~   46 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLAN-GANVVNADIHGGDG   46 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCcccc
Confidence            4689999999999999988888774 99999998876543

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=94.16  E-value=0.22  Score=37.52  Aligned_cols=87  Identities=23%  Similarity=0.389  Sum_probs=55.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCC--hhh-HHHHHHcCCcEEeeCCCccccc-----------C-------
Q 023273          154 ILVLGGAGGVGTMVIQLAKHVF-GASKVAATSS--TAK-LDLLRSLGADLAIDYTKENIED-----------L-------  211 (284)
Q Consensus       154 vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~--~~~-~~~~~~~g~~~~~~~~~~~~~~-----------~-------  211 (284)
                      |.|+|++|.+|..+.++.+... .++++.+...  -++ .++++++.+..+.-.+......           .       
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~   80 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE   80 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence            5799999999999999999852 2678777653  233 3555778877655443221110           0       


Q ss_pred             -------CCcccEEEeCC-C--CcHHHHHhhccCCEEEE
Q 023273          212 -------PEKFDVVFDAV-G--QCDKALKAVKEGGRVVS  240 (284)
Q Consensus       212 -------~~~~d~vid~~-g--~~~~~~~~l~~~G~~v~  240 (284)
                             ...+|+++.+. |  +..-.+..++.+-++.+
T Consensus        81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL  119 (129)
T PF02670_consen   81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL  119 (129)
T ss_dssp             HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred             HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence                   24799999985 4  25778888887766653

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A

Probab=94.15  E-value=0.21  Score=38.68  Aligned_cols=93  Identities=30%  Similarity=0.440  Sum_probs=62.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCccccc-CCCcccEEEe
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIED-LPEKFDVVFD  220 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~-~~~~~d~vid  220 (284)
                      +.+.+||-+|  .+.|..+..++... .+.+++.++.+++..+.+++    .+..  .++..+-.+++. ..+.+|+|+.
T Consensus         2 ~~~~~iLDlG--cG~G~~~~~l~~~~~~~~~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~~d~~~l~~~~~~~~D~I~~   79 (152)
T PF13847_consen    2 KSNKKILDLG--CGTGRLLIQLAKELNPGAKIIGVDISEEMIEYAKKRAKELGLDNIEFIQGDIEDLPQELEEKFDIIIS   79 (152)
T ss_dssp             TTTSEEEEET---TTSHHHHHHHHHSTTTSEEEEEESSHHHHHHHHHHHHHTTSTTEEEEESBTTCGCGCSSTTEEEEEE
T ss_pred             CCCCEEEEec--CcCcHHHHHHHHhcCCCCEEEEEECcHHHHHHhhcccccccccccceEEeehhccccccCCCeeEEEE
Confidence            4678899888  35667777777432 36899999999998888865    4543  333333222322 1268999998


Q ss_pred             CCC-----C----cHHHHHhhccCCEEEEEcC
Q 023273          221 AVG-----Q----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       221 ~~g-----~----~~~~~~~l~~~G~~v~~g~  243 (284)
                      ...     .    ++.+.+.|+++|+++....
T Consensus        80 ~~~l~~~~~~~~~l~~~~~~lk~~G~~i~~~~  111 (152)
T PF13847_consen   80 NGVLHHFPDPEKVLKNIIRLLKPGGILIISDP  111 (152)
T ss_dssp             ESTGGGTSHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cCchhhccCHHHHHHHHHHHcCCCcEEEEEEC
Confidence            643     1    2678899999999986653

...

>PRK08278 short chain dehydrogenase; Provisional

Probab=94.13  E-value=0.3  Score=41.77  Aligned_cols=37  Identities=27%  Similarity=0.490  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      .+.+++|+|++|++|...++.+... |++++++.++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~   41 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARD-GANIVIAAKTAE   41 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecccc
Confidence            4679999999999999988887774 999999988654

>PRK09186 flagellin modification protein A; Provisional

Probab=94.13  E-value=0.14  Score=43.01  Aligned_cols=42  Identities=29%  Similarity=0.486  Sum_probs=35.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|++|++|...+..+... |++++++.+++++.+.+
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~   44 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEA-GGIVIAADIDKEALNEL   44 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecChHHHHHH
Confidence            5789999999999999988888874 99999999887776544

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.12  E-value=0.27  Score=41.63  Aligned_cols=35  Identities=31%  Similarity=0.374  Sum_probs=29.6

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          150 AGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       150 ~g~~vlI~ga--~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      .+++++|+|+  ++++|.+.++..... |++|+++.++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~-G~~v~l~~r~   42 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQ-GAEVVLTGFG   42 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHC-CCEEEEecCc
Confidence            5789999998  799999988877774 9999988765

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.08  E-value=0.34  Score=45.22  Aligned_cols=70  Identities=24%  Similarity=0.329  Sum_probs=49.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh-----hHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-----KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      ..+++|+|+| .|.+|+.++.+++.. |.+|++++.+++     ..+.+++.|.....+....    ....+|+|+.+.|
T Consensus        14 ~~~~~v~viG-~G~~G~~~A~~L~~~-G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~----~~~~~D~Vv~s~G   87 (480)
T PRK01438         14 WQGLRVVVAG-LGVSGFAAADALLEL-GARVTVVDDGDDERHRALAAILEALGATVRLGPGPT----LPEDTDLVVTSPG   87 (480)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc----ccCCCCEEEECCC
Confidence            3567999999 799999999999885 999999886542     2234556675544333221    2356899998888


Q ss_pred             C
Q 023273          224 Q  224 (284)
Q Consensus       224 ~  224 (284)
                      .
T Consensus        88 i   88 (480)
T PRK01438         88 W   88 (480)
T ss_pred             c
Confidence            3

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=94.07  E-value=0.54  Score=39.44  Aligned_cols=94  Identities=20%  Similarity=0.217  Sum_probs=60.3

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCcE---EeeCCCcc-cccC----
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADL---AIDYTKEN-IEDL----  211 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~---~~~~~~~~-~~~~----  211 (284)
                      ..+..+.++||-+|  .+.|..++.+++.+. +.+++.++.+++..+.+++    .|...   ++..+... +...    
T Consensus        63 l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~~  140 (234)
T PLN02781         63 LVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNND  140 (234)
T ss_pred             HHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhCC
Confidence            45667788999998  356666666766543 4689999999998877754    34221   22211111 1111    


Q ss_pred             -CCcccEEEeCCC--C----cHHHHHhhccCCEEEE
Q 023273          212 -PEKFDVVFDAVG--Q----CDKALKAVKEGGRVVS  240 (284)
Q Consensus       212 -~~~~d~vid~~g--~----~~~~~~~l~~~G~~v~  240 (284)
                       .+.||+||--..  .    ++.++++|+++|.++.
T Consensus       141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~  176 (234)
T PLN02781        141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAF  176 (234)
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence             357998864332  2    3788999999998875

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.98  E-value=0.88  Score=39.33  Aligned_cols=77  Identities=25%  Similarity=0.278  Sum_probs=53.1

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCcH-
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCD-  226 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~~-  226 (284)
                      .-.|++++|+|+++-+|...+.++... +++|+++.+..+.+.                   +..+.+|++++++|.+. 
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~-gatVtv~~~~t~~L~-------------------~~~~~aDIvI~AtG~~~~  215 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNA-NATVTICHSRTQNLP-------------------ELVKQADIIVGAVGKPEL  215 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhC-CCEEEEEeCCchhHH-------------------HHhccCCEEEEccCCCCc
Confidence            457899999995445999999988875 887777765322111                   11257899999998532 


Q ss_pred             HHHHhhccCCEEEEEcCC
Q 023273          227 KALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       227 ~~~~~l~~~G~~v~~g~~  244 (284)
                      --.+.++++..++.++..
T Consensus       216 v~~~~lk~gavViDvg~n  233 (283)
T PRK14192        216 IKKDWIKQGAVVVDAGFH  233 (283)
T ss_pred             CCHHHcCCCCEEEEEEEe
Confidence            223568888888777754

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=93.98  E-value=0.17  Score=49.19  Aligned_cols=78  Identities=15%  Similarity=0.081  Sum_probs=49.2

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCC--C-cc-cccCCCcccEEEeC
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYT--K-EN-IEDLPEKFDVVFDA  221 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~--~-~~-~~~~~~~~d~vid~  221 (284)
                      ....++++|+|+||+|-+|...++.+...++.+|+++++.+.+.........-+++.-+  + .. ....-.++|+||.+
T Consensus       310 ~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHl  389 (660)
T PRK08125        310 CSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPL  389 (660)
T ss_pred             hhhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEEC
Confidence            34567889999999999999999877753368999999866543322111111222211  1 11 22223579999997


Q ss_pred             CC
Q 023273          222 VG  223 (284)
Q Consensus       222 ~g  223 (284)
                      ++
T Consensus       390 Aa  391 (660)
T PRK08125        390 VA  391 (660)
T ss_pred             cc
Confidence            75

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=93.98  E-value=0.28  Score=42.79  Aligned_cols=58  Identities=28%  Similarity=0.391  Sum_probs=49.8

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcCCcEEee
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAID  202 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~  202 (284)
                      ..+.+.||.++||-.-+|.+|...+-++... |++.+++..   +.||...++.+|+..+..
T Consensus        96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~-Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~t  156 (362)
T KOG1252|consen   96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALR-GYKCIITMPEKMSKEKRILLRALGAEIILT  156 (362)
T ss_pred             HcCCccCCceEEEecCCCchHHHHHHHHHHc-CceEEEEechhhhHHHHHHHHHcCCEEEec
Confidence            3578999999999999999999999999984 999998865   778888999999876543

>PRK07577 short chain dehydrogenase; Provisional

Probab=93.93  E-value=0.23  Score=41.09  Aligned_cols=38  Identities=18%  Similarity=0.382  Sum_probs=32.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      .+++++|+|++|++|...++.+... |.+|+++.+++++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~-G~~v~~~~r~~~~   39 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANL-GHQVIGIARSAID   39 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEEeCCccc
Confidence            4678999999999999988888874 9999999887654

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=93.91  E-value=0.66  Score=40.26  Aligned_cols=86  Identities=26%  Similarity=0.328  Sum_probs=54.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE---Eee---CCCcccccCCCcccEEEeCCCC--
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL---AID---YTKENIEDLPEKFDVVFDAVGQ--  224 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~---~~~---~~~~~~~~~~~~~d~vid~~g~--  224 (284)
                      +|.|+| +|.+|...+..+... |.+|+++++++++.+.+++.|...   ...   ....+.... +.+|++|-++..  
T Consensus         2 ~I~IiG-~G~~G~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~   78 (304)
T PRK06522          2 KIAILG-AGAIGGLFGAALAQA-GHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ   78 (304)
T ss_pred             EEEEEC-CCHHHHHHHHHHHhC-CCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc
Confidence            689999 799998877777663 889999999888877777655321   000   001111222 679999988764  


Q ss_pred             cHHHHHhhc----cCCEEEEE
Q 023273          225 CDKALKAVK----EGGRVVSI  241 (284)
Q Consensus       225 ~~~~~~~l~----~~G~~v~~  241 (284)
                      ...+++.++    ++..++.+
T Consensus        79 ~~~~~~~l~~~l~~~~~iv~~   99 (304)
T PRK06522         79 LPAALPSLAPLLGPDTPVLFL   99 (304)
T ss_pred             HHHHHHHHhhhcCCCCEEEEe
Confidence            344444443    34456554

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=93.90  E-value=0.17  Score=45.04  Aligned_cols=38  Identities=24%  Similarity=0.293  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      .+++|||+|++|.+|..+++.+... |.+|+++++++..
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~-G~~V~~~~r~~~~   40 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLEL-GAEVYGYSLDPPT   40 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHC-CCEEEEEeCCCcc
Confidence            4689999999999999999988884 8999999876554

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK01581 speE spermidine synthase; Validated

Probab=93.86  E-value=0.88  Score=40.66  Aligned_cols=93  Identities=15%  Similarity=0.184  Sum_probs=58.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-----------c--EEeeCCCcc-cccCCCc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-----------D--LAIDYTKEN-IEDLPEK  214 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-----------~--~~~~~~~~~-~~~~~~~  214 (284)
                      ...++||++|  |+.|.++..+++.-...++++++.+++-.+.++++..           .  +++..+... +....+.
T Consensus       149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~~~~  226 (374)
T PRK01581        149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSSPSSL  226 (374)
T ss_pred             CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHhcCCC
Confidence            4456999999  4567677777776223689999999998888886210           0  111111111 1222457


Q ss_pred             ccEEEeCC----CC----------cHHHHHhhccCCEEEEEcC
Q 023273          215 FDVVFDAV----GQ----------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       215 ~d~vid~~----g~----------~~~~~~~l~~~G~~v~~g~  243 (284)
                      +|+||--.    +.          ++.+.++|+++|.++.-..
T Consensus       227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~  269 (374)
T PRK01581        227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN  269 (374)
T ss_pred             ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence            99976432    11          2578889999999987644

>PRK07201 short chain dehydrogenase; Provisional

Probab=93.83  E-value=0.27  Score=47.68  Aligned_cols=41  Identities=27%  Similarity=0.445  Sum_probs=35.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      +++++|+|++|++|...+...... |++|+++++++++.+.+
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~  411 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEA-GATVFLVARNGEALDEL  411 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            678999999999999988887774 99999999988776554

>PRK14904 16S rRNA methyltransferase B; Provisional

Probab=93.81  E-value=1.4  Score=40.66  Aligned_cols=96  Identities=22%  Similarity=0.249  Sum_probs=57.7

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChhhHHHHH----HcCCcE--EeeCCCcccccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~d  216 (284)
                      ....+.+|++||-+|+ | .|..+..++..+ .+.+++.++.++++.+.++    ..|...  ++..+...+. ....||
T Consensus       244 ~~l~~~~g~~VLDlga-G-~G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da~~~~-~~~~fD  320 (445)
T PRK14904        244 LLLNPQPGSTVLDLCA-A-PGGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITIIETIEGDARSFS-PEEQPD  320 (445)
T ss_pred             HhcCCCCCCEEEEECC-C-CCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCcccccc-cCCCCC
Confidence            4556788999998884 2 233333333332 1458999999999887764    345432  2222222221 134699


Q ss_pred             EEEe---CCCC----------------------------cHHHHHhhccCCEEEEEc
Q 023273          217 VVFD---AVGQ----------------------------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       217 ~vid---~~g~----------------------------~~~~~~~l~~~G~~v~~g  242 (284)
                      .|+-   |+|.                            +..++++|+++|+++...
T Consensus       321 ~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvyst  377 (445)
T PRK14904        321 AILLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAELLDHAASLLKPGGVLVYAT  377 (445)
T ss_pred             EEEEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            8873   4441                            135677899999998654

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=93.80  E-value=0.38  Score=41.66  Aligned_cols=57  Identities=25%  Similarity=0.430  Sum_probs=46.5

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcCCcEEee
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAID  202 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~  202 (284)
                      ..+.++||++|+- +.+|.+|.+.+.+|+.+ |++.+++..   +.+|.+.++.+|++.++.
T Consensus        55 ~~G~l~pG~tIVE-~TSGNTGI~LA~vaa~~-Gy~~iivmP~~~S~er~~~l~a~GAevi~t  114 (300)
T COG0031          55 KRGLLKPGGTIVE-ATSGNTGIALAMVAAAK-GYRLIIVMPETMSQERRKLLRALGAEVILT  114 (300)
T ss_pred             HcCCCCCCCEEEE-cCCChHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence            4577999996555 55999999999999995 999888764   788999999999876543

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=93.78  E-value=0.082  Score=46.21  Aligned_cols=70  Identities=20%  Similarity=0.297  Sum_probs=46.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-cccccCCCcccEEEeCCC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~d~vid~~g  223 (284)
                      +++|+|++|.+|...++.+... |.+|+++++++++.....+.+...+ .|..+ +.+.+.-+++|+||++++
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~   73 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQ-GEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAA   73 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHC-CCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence            6899999999999999888874 8999999987765443333332211 12211 123333457899998875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=93.77  E-value=1.1  Score=32.78  Aligned_cols=85  Identities=19%  Similarity=0.250  Sum_probs=58.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCc---ccccC-CCcccEEEeCCCCc----
Q 023273          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE---NIEDL-PEKFDVVFDAVGQC----  225 (284)
Q Consensus       154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~-~~~~d~vid~~g~~----  225 (284)
                      |+|.| .|.+|...++.++. .+.++++++.++++.+.+++.+.. ++.-+..   .+.+. .+.++.++-++++.    
T Consensus         1 vvI~G-~g~~~~~i~~~L~~-~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~   77 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKE-GGIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERAGIEKADAVVILTDDDEENL   77 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHH-TTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHTTGGCESEEEEESSSHHHHH
T ss_pred             eEEEc-CCHHHHHHHHHHHh-CCCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhcCccccCEEEEccCCHHHHH
Confidence            57888 79999999999998 477999999999999999988854 3332221   12222 35788888887752    


Q ss_pred             --HHHHHhhccCCEEEEE
Q 023273          226 --DKALKAVKEGGRVVSI  241 (284)
Q Consensus       226 --~~~~~~l~~~G~~v~~  241 (284)
                        -..++.+.+..+++..
T Consensus        78 ~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   78 LIALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHHHCCCCeEEEE
Confidence              2344445566666644

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=93.76  E-value=0.15  Score=43.38  Aligned_cols=64  Identities=22%  Similarity=0.241  Sum_probs=46.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCC-cccEEEeCCC
Q 023273          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPE-KFDVVFDAVG  223 (284)
Q Consensus       154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~d~vid~~g  223 (284)
                      |+|+|++|-+|...+..... .|..|+++++++.+.+........   +  -+.+.+... ++|+|||-+|
T Consensus         1 IliTGgTGlIG~~L~~~L~~-~gh~v~iltR~~~~~~~~~~~~v~---~--~~~~~~~~~~~~DavINLAG   65 (297)
T COG1090           1 ILITGGTGLIGRALTARLRK-GGHQVTILTRRPPKASQNLHPNVT---L--WEGLADALTLGIDAVINLAG   65 (297)
T ss_pred             CeEeccccchhHHHHHHHHh-CCCeEEEEEcCCcchhhhcCcccc---c--cchhhhcccCCCCEEEECCC
Confidence            58999999999999999888 489999999988776643332211   1  111222223 7999999988

>PF00044 Gp_dh_N: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; InterPro: IPR020828 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) plays an important role in glycolysis and gluconeogenesis [] by reversibly catalysing the oxidation and phosphorylation of D-glyceraldehyde-3-phosphate to 1,3-diphospho-glycerate

Probab=93.75  E-value=0.38  Score=37.41  Aligned_cols=105  Identities=20%  Similarity=0.243  Sum_probs=63.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcC-------Cc------E-EeeCC---------Cc
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLG-------AD------L-AIDYT---------KE  206 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g-------~~------~-~~~~~---------~~  206 (284)
                      +|.|.| -|.+|+.+++.+.......++++..   +.+....+-+..       ..      . .++-.         ..
T Consensus         2 kVgING-fGRIGR~v~r~~~~~~~~evvaInd~~~~~~~~a~LlkyDs~~G~~~~~v~~~~~~l~v~G~~I~~~~~~dp~   80 (151)
T PF00044_consen    2 KVGING-FGRIGRLVLRAALDQPDIEVVAINDPAPDPEYLAYLLKYDSVHGRFPGDVEVDDDGLIVNGKKIKVTEERDPE   80 (151)
T ss_dssp             EEEEES-TSHHHHHHHHHHHTSTTEEEEEEEESSSSHHHHHHHHHEETTTESGSSHEEEETTEEEETTEEEEEEHTSSGG
T ss_pred             EEEEEC-CCcccHHHHHhhcccceEEEEEEecccccchhhhhhhhccccccceecccccccceeEeecccccchhhhhhc
Confidence            578989 9999999999998644556665542   244444443321       00      0 01100         01


Q ss_pred             ccccCCCcccEEEeCCCCc---HHHHHhhccCCEEEEEcCCCCCC-ceeEEEeccH
Q 023273          207 NIEDLPEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTPP-ASSFVLTSDG  258 (284)
Q Consensus       207 ~~~~~~~~~d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~  258 (284)
                      .++....++|+|+||+|.+   ..+...+..+-+=|+++.+.... ..+++++.+.
T Consensus        81 ~i~W~~~gvDiVvEcTG~f~~~~~~~~hl~~GakkViisap~~~~~~~t~V~GvN~  136 (151)
T PF00044_consen   81 EIPWGELGVDIVVECTGKFRTRENAEAHLDAGAKKVIISAPSKDDADPTFVMGVNH  136 (151)
T ss_dssp             GSTHHHHTESEEEETSSSTHSHHHHTHHHHTTESEEEESSS-SSSSSEEE-TTTSG
T ss_pred             ccccccccccEEEeccccceecccccccccccccceeeccccccccCCeEEeeccH
Confidence            1111124899999999964   56667888998888898887665 6666665443

The enzyme exists as a tetramer of identical subunits, each containing 2 conserved functional domains: an NAD-binding domain, and a highly conserved catalytic domain []. The enzyme has been found to bind to actin and tropomyosin, and may thus have a role in cytoskeleton assembly. Alternatively, the cytoskeleton may provide a framework for precise positioning of the glycolytic enzymes, thus permitting efficient passage of metabolites from enzyme to enzyme []. GAPDH displays diverse non-glycolytic functions as well, its role depending upon its subcellular location. For instance, the translocation of GAPDH to the nucleus acts as a signalling mechanism for programmed cell death, or apoptosis []. The accumulation of GAPDH within the nucleus is involved in the induction of apoptosis, where GAPDH functions in the activation of transcription. The presence of GAPDH is associated with the synthesis of pro-apoptotic proteins like BAX, c-JUN and GAPDH itself. GAPDH has been implicated in certain neurological diseases: GAPDH is able to bind to the gene products from neurodegenerative disorders such as Huntington's disease, Alzheimer's disease, Parkinson's disease and Machado-Joseph disease through stretches encoded by their CAG repeats. Abnormal neuronal apoptosis is associated with these diseases. Propargylamines such as deprenyl increase neuronal survival by interfering with apoptosis signalling pathways via their binding to GAPDH, which decreases the synthesis of pro-apoptotic proteins []. This entry represents the N-terminal domain which is a Rossmann NAD(P) binding fold.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 2G82_Q 1CER_R 1ZNQ_Q 3GPD_G 1U8F_R 3DOC_B 2YYY_A 1GPD_G 4GPD_1 2I5P_O ....

>PRK09135 pteridine reductase; Provisional

Probab=93.70  E-value=0.4  Score=39.95  Aligned_cols=36  Identities=19%  Similarity=0.311  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      .+.+++|+|++|.+|...++..... |++|+++.++.
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~-g~~v~~~~r~~   40 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAA-GYRVAIHYHRS   40 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCC
Confidence            4578999999999999988888774 99999998753

>PLN00016 RNA-binding protein; Provisional

Probab=93.69  E-value=0.38  Score=43.35  Aligned_cols=92  Identities=17%  Similarity=0.216  Sum_probs=57.9

Q ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-----------HHcCCcEEeeCCCcccccC--C
Q 023273          150 AGKSILVL----GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-----------RSLGADLAIDYTKENIEDL--P  212 (284)
Q Consensus       150 ~g~~vlI~----ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~~~~~--~  212 (284)
                      ...+|||+    |++|.+|...+..+... |.+|+++++++++...+           ...+...+ ..+..++...  .
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v-~~D~~d~~~~~~~  128 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKA-GHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTV-WGDPADVKSKVAG  128 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHC-CCEEEEEecCCcchhhhccCchhhhhHhhhcCceEE-EecHHHHHhhhcc
Confidence            44689999    99999999999888874 89999999876543211           12232222 1111112222  3


Q ss_pred             CcccEEEeCCCC----cHHHHHhhccC--CEEEEEcC
Q 023273          213 EKFDVVFDAVGQ----CDKALKAVKEG--GRVVSIIG  243 (284)
Q Consensus       213 ~~~d~vid~~g~----~~~~~~~l~~~--G~~v~~g~  243 (284)
                      .++|+||++.+.    ...+++.++..  .++|.++.
T Consensus       129 ~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS  165 (378)
T PLN00016        129 AGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS  165 (378)
T ss_pred             CCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            579999999874    23455555433  47887754

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=93.68  E-value=0.25  Score=43.13  Aligned_cols=73  Identities=16%  Similarity=0.247  Sum_probs=46.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH---HHc-C---CcEEeeCC---CcccccCCCcccEEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL---RSL-G---ADLAIDYT---KENIEDLPEKFDVVF  219 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~---~~~-g---~~~~~~~~---~~~~~~~~~~~d~vi  219 (284)
                      .+.+|||+|++|.+|...+..+... |.+|++++++.++....   ... +   ....+..+   ...+...-+++|.||
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   81 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQR-GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF   81 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHC-CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence            3578999999999999999888884 99999888865543222   111 1   11122111   112333345789999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      .+++
T Consensus        82 h~A~   85 (322)
T PLN02662         82 HTAS   85 (322)
T ss_pred             EeCC
Confidence            9875

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=93.66  E-value=0.43  Score=40.31  Aligned_cols=36  Identities=25%  Similarity=0.327  Sum_probs=30.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      ..+++++|+|++|++|...++..... |++++++.++
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~-G~~vvi~~~~   40 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKE-KAKVVINYRS   40 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCC
Confidence            35789999999999999999888874 8888887764

>PRK06701 short chain dehydrogenase; Provisional

Probab=93.64  E-value=0.44  Score=41.21  Aligned_cols=39  Identities=28%  Similarity=0.356  Sum_probs=32.4

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      ....+.++||+|++|++|...+...... |++|+++.+++
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~-G~~V~l~~r~~   80 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKE-GADIAIVYLDE   80 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCc
Confidence            3445789999999999999988887774 99999888764

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=93.59  E-value=0.56  Score=44.34  Aligned_cols=84  Identities=24%  Similarity=0.394  Sum_probs=60.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~-----  224 (284)
                      .|++|.|+| .|.+|...++.++. +|.+|++.++.... +.....+....      ++.+..+..|+|+.+...     
T Consensus       139 ~gktvgIiG-~G~IG~~vA~~l~~-fG~~V~~~d~~~~~-~~~~~~g~~~~------~l~ell~~aDiV~l~lP~t~~t~  209 (526)
T PRK13581        139 YGKTLGIIG-LGRIGSEVAKRAKA-FGMKVIAYDPYISP-ERAAQLGVELV------SLDELLARADFITLHTPLTPETR  209 (526)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEECCCCCh-hHHHhcCCEEE------cHHHHHhhCCEEEEccCCChHhh
Confidence            588999999 89999999999998 59999999875322 22344554321      233445678998887652     


Q ss_pred             --c-HHHHHhhccCCEEEEEc
Q 023273          225 --C-DKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g  242 (284)
                        . ...+.+|+++..+|.++
T Consensus       210 ~li~~~~l~~mk~ga~lIN~a  230 (526)
T PRK13581        210 GLIGAEELAKMKPGVRIINCA  230 (526)
T ss_pred             cCcCHHHHhcCCCCeEEEECC
Confidence              1 57888999998888775

>PRK14982 acyl-ACP reductase; Provisional

Probab=93.59  E-value=0.29  Score=43.42  Aligned_cols=91  Identities=16%  Similarity=0.210  Sum_probs=58.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHH-HcCCcEEeeCCCcccccCCCcccEEEeCCCCcH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVGQCD  226 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  226 (284)
                      -.+.+|+|+||+|.+|..+++......+ .+++++.++.++...+. +++...+.     ++.+.....|+|+.+++.++
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~-----~l~~~l~~aDiVv~~ts~~~  227 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL-----SLEEALPEADIVVWVASMPK  227 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH-----hHHHHHccCCEEEECCcCCc
Confidence            4678999999999999998888764224 57888888877776653 34321111     12333457899999887532


Q ss_pred             ---HHHHhhccCCEEEEEcCC
Q 023273          227 ---KALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       227 ---~~~~~l~~~G~~v~~g~~  244 (284)
                         .-.+.+++.-.++.++.|
T Consensus       228 ~~~I~~~~l~~~~~viDiAvP  248 (340)
T PRK14982        228 GVEIDPETLKKPCLMIDGGYP  248 (340)
T ss_pred             CCcCCHHHhCCCeEEEEecCC
Confidence               112455666666666665

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=93.59  E-value=0.64  Score=37.99  Aligned_cols=91  Identities=14%  Similarity=0.135  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCC-ccccc-C-CCcccEEEe
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTK-ENIED-L-PEKFDVVFD  220 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~-~~~~~-~-~~~~d~vid  220 (284)
                      ++.+||-+|+  +.|..+..+++...+.+++.++.+++..+.+++    .+..  .++..+. ..+.. . ...+|.++-
T Consensus        40 ~~~~VLDiGc--GtG~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~D~V~~  117 (202)
T PRK00121         40 DAPIHLEIGF--GKGEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLCGDAVEVLLDMFPDGSLDRIYL  117 (202)
T ss_pred             CCCeEEEEcc--CCCHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEecCHHHHHHHHcCccccceEEE
Confidence            6788999983  447777777776445789999999998877753    2222  2233332 22221 2 346898875


Q ss_pred             CCCC-----------------cHHHHHhhccCCEEEEEc
Q 023273          221 AVGQ-----------------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       221 ~~g~-----------------~~~~~~~l~~~G~~v~~g  242 (284)
                      ....                 ++.+.+.|+++|.+++..
T Consensus       118 ~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~~  156 (202)
T PRK00121        118 NFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFAT  156 (202)
T ss_pred             ECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEEc
Confidence            3221                 367788999999998754

>PRK15068 tRNA mo(5)U34 methyltransferase; Provisional

Probab=93.58  E-value=1  Score=39.73  Aligned_cols=93  Identities=19%  Similarity=0.198  Sum_probs=58.4

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH---H-cCC---cEEeeCCCcccccCCCcccE
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR---S-LGA---DLAIDYTKENIEDLPEKFDV  217 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~---~-~g~---~~~~~~~~~~~~~~~~~~d~  217 (284)
                      .....+|++||-+|  ++.|..+..++.. +...|+.++.++.-....+   . .+.   ..++..+-..++. .+.||+
T Consensus       117 ~l~~l~g~~VLDIG--CG~G~~~~~la~~-g~~~V~GiD~S~~~l~q~~a~~~~~~~~~~i~~~~~d~e~lp~-~~~FD~  192 (322)
T PRK15068        117 HLSPLKGRTVLDVG--CGNGYHMWRMLGA-GAKLVVGIDPSQLFLCQFEAVRKLLGNDQRAHLLPLGIEQLPA-LKAFDT  192 (322)
T ss_pred             hhCCCCCCEEEEec--cCCcHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEeCCHHHCCC-cCCcCE
Confidence            34445788999998  3567788888887 4567999998876443321   2 111   1222222222222 467999


Q ss_pred             EEeCCC-----C----cHHHHHhhccCCEEEEE
Q 023273          218 VFDAVG-----Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       218 vid~~g-----~----~~~~~~~l~~~G~~v~~  241 (284)
                      |+...-     +    +..+.+.|+++|++++-
T Consensus       193 V~s~~vl~H~~dp~~~L~~l~~~LkpGG~lvl~  225 (322)
T PRK15068        193 VFSMGVLYHRRSPLDHLKQLKDQLVPGGELVLE  225 (322)
T ss_pred             EEECChhhccCCHHHHHHHHHHhcCCCcEEEEE
Confidence            987421     2    36888999999999864

>PLN02366 spermidine synthase

Probab=93.56  E-value=0.46  Score=41.60  Aligned_cols=93  Identities=17%  Similarity=0.274  Sum_probs=57.2

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHHcCCc----------EEeeCCCcc-cccC-CCc
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGAD----------LAIDYTKEN-IEDL-PEK  214 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~g~~----------~~~~~~~~~-~~~~-~~~  214 (284)
                      ..+.++||++|+ | -|..+..+++. .. .++.+++.+++-.+.+++.-..          .++..+... +.+. .+.
T Consensus        89 ~~~pkrVLiIGg-G-~G~~~rellk~-~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~  165 (308)
T PLN02366         89 IPNPKKVLVVGG-G-DGGVLREIARH-SSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGT  165 (308)
T ss_pred             CCCCCeEEEEcC-C-ccHHHHHHHhC-CCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCC
Confidence            345789999993 3 36667777776 44 5788889988877777663210          111111111 1222 356


Q ss_pred             ccEEEe-CCCC------------cHHHHHhhccCCEEEEEcC
Q 023273          215 FDVVFD-AVGQ------------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       215 ~d~vid-~~g~------------~~~~~~~l~~~G~~v~~g~  243 (284)
                      +|+||. ....            ++.+.++|+++|.++.-++
T Consensus       166 yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~~  207 (308)
T PLN02366        166 YDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQAE  207 (308)
T ss_pred             CCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECcC
Confidence            999864 3210            2578899999999986543

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=93.55  E-value=0.38  Score=44.35  Aligned_cols=72  Identities=19%  Similarity=0.200  Sum_probs=45.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh-HHHHHH-cC--CcEEeeCCCcccccCCCcccEEEeCCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRS-LG--ADLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~-~~~~~~-~g--~~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      ++..+|+|+|++|-+|...+..+... |.+|+++++.... ...... .+  ....++.+  .......++|+||.+++
T Consensus       118 ~~~mkILVTGatGFIGs~Lv~~Ll~~-G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~D--i~~~~~~~~D~ViHlAa  193 (436)
T PLN02166        118 RKRLRIVVTGGAGFVGSHLVDKLIGR-GDEVIVIDNFFTGRKENLVHLFGNPRFELIRHD--VVEPILLEVDQIYHLAC  193 (436)
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCCCccHhHhhhhccCCceEEEECc--cccccccCCCEEEECce
Confidence            45679999999999999999988884 9999998864321 111111 11  11122211  11222357999999875

>PRK14901 16S rRNA methyltransferase B; Provisional

Probab=93.51  E-value=1.4  Score=40.62  Aligned_cols=95  Identities=21%  Similarity=0.240  Sum_probs=58.2

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHH----HcCCcE--EeeCCCcccc----cCCC
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIE----DLPE  213 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~----~~~~  213 (284)
                      ..++++|++||-.|+  +.|.-+..++..+. ..++++++.++++.+.++    .+|.+.  ++..+...+.    ...+
T Consensus       247 ~l~~~~g~~VLDl~a--g~G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~  324 (434)
T PRK14901        247 LLDPQPGEVILDACA--APGGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSRNLLELKPQWRG  324 (434)
T ss_pred             HhCCCCcCEEEEeCC--CCchhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhcccccccccc
Confidence            456788999988874  23334444555432 358999999999887764    455443  2332222222    1134


Q ss_pred             cccEEE-e--CCC--C--------------------------cHHHHHhhccCCEEEEE
Q 023273          214 KFDVVF-D--AVG--Q--------------------------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       214 ~~d~vi-d--~~g--~--------------------------~~~~~~~l~~~G~~v~~  241 (284)
                      .||.|+ |  |+|  .                          +..+++.|+++|+++..
T Consensus       325 ~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvys  383 (434)
T PRK14901        325 YFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYA  383 (434)
T ss_pred             cCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            699876 4  444  1                          13578899999999854

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=93.48  E-value=0.31  Score=40.72  Aligned_cols=34  Identities=32%  Similarity=0.465  Sum_probs=28.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~  184 (284)
                      ++++++|+|++|++|...++.+... |+++++...
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~-G~~vv~~~~   35 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKD-GFKVVAGCG   35 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcC
Confidence            4678999999999999999888885 888877543

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=93.48  E-value=1.1  Score=41.14  Aligned_cols=96  Identities=17%  Similarity=0.193  Sum_probs=59.2

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChhhHHHHH----HcCCcE--EeeCCCcccc-cCCCccc
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIE-DLPEKFD  216 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~-~~~~~~d  216 (284)
                      ..++++|++||-.++  +.|.-++.++..+ .+.+|++++.++++++.++    ..|...  ++..+...+. ...+.||
T Consensus       232 ~l~~~~g~~VLD~ca--gpGgkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da~~l~~~~~~~fD  309 (431)
T PRK14903        232 LMELEPGLRVLDTCA--APGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADAERLTEYVQDTFD  309 (431)
T ss_pred             HhCCCCCCEEEEeCC--CccHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECchhhhhhhhhccCC
Confidence            457789999988873  2333444444443 2468999999999988775    345432  2222222222 1235699


Q ss_pred             EEEe---CCC--C--------------------------cHHHHHhhccCCEEEEEc
Q 023273          217 VVFD---AVG--Q--------------------------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       217 ~vid---~~g--~--------------------------~~~~~~~l~~~G~~v~~g  242 (284)
                      .|+-   |+|  .                          +..+++.|+++|+++...
T Consensus       310 ~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT  366 (431)
T PRK14903        310 RILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYST  366 (431)
T ss_pred             EEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence            8873   333  1                          125788999999987554

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.46  E-value=0.53  Score=39.10  Aligned_cols=37  Identities=30%  Similarity=0.434  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      .+.+++|+|++|.+|...+..+... |++|+++.++++
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~-G~~v~~~~~~~~   40 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQ-GANVVINYASSE   40 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCch
Confidence            4578999999999999999998884 999987777544

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=93.46  E-value=1.6  Score=37.35  Aligned_cols=95  Identities=20%  Similarity=0.236  Sum_probs=57.3

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHH----HcCCcE--EeeCCCcccccCCCcccE
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEKFDV  217 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~d~  217 (284)
                      ...+++|++||-.++ | .|..++.++..+. ...|+.++.++++.+.++    ..+...  ++..+...+....+.+|.
T Consensus        66 ~l~~~~g~~VLDl~a-g-~G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~~~~~~fD~  143 (264)
T TIGR00446        66 ALEPDPPERVLDMAA-A-PGGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGRVFGAAVPKFDA  143 (264)
T ss_pred             HhCCCCcCEEEEECC-C-chHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHHHhhhhccCCCE
Confidence            346789999988874 3 3444444454432 248999999999987774    345432  222222222222345998


Q ss_pred             EEe---CCCC----------------------------cHHHHHhhccCCEEEEE
Q 023273          218 VFD---AVGQ----------------------------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       218 vid---~~g~----------------------------~~~~~~~l~~~G~~v~~  241 (284)
                      ||-   |+|.                            +..++++|+++|+++..
T Consensus       144 Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYs  198 (264)
T TIGR00446       144 ILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYS  198 (264)
T ss_pred             EEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            863   3441                            13577889999999744

>PLN02206 UDP-glucuronate decarboxylase

Probab=93.46  E-value=0.31  Score=45.01  Aligned_cols=72  Identities=18%  Similarity=0.254  Sum_probs=44.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh-hHHHH-HHcCC--cEEeeCCCcccccCCCcccEEEeCCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLL-RSLGA--DLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~~-~~~g~--~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      ..+++|+|+|++|-+|...++.+... |.+|+++++... +.+.. ..+..  -..++.  +.......++|+||.+++
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~-G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~--D~~~~~l~~~D~ViHlAa  192 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMAR-GDSVIVVDNFFTGRKENVMHHFSNPNFELIRH--DVVEPILLEVDQIYHLAC  192 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHC-cCEEEEEeCCCccchhhhhhhccCCceEEEEC--CccChhhcCCCEEEEeee
Confidence            35689999999999999999998884 999998875321 11111 11111  112211  112222357999999875

>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional

Probab=93.44  E-value=0.39  Score=40.60  Aligned_cols=94  Identities=20%  Similarity=0.304  Sum_probs=58.9

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHh--cCCeEEEEeCChhhHHHHHHc----CCcEEeeCCCcccccC-CCcccEEEe
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHV--FGASKVAATSSTAKLDLLRSL----GADLAIDYTKENIEDL-PEKFDVVFD  220 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~--~g~~vi~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~-~~~~d~vid  220 (284)
                      +.++.+||-+|+ | .|..+..+++..  .+.+++.++.+++-++.+++.    +...-++....+..+. ...+|+++.
T Consensus        54 ~~~~~~vLDlGc-G-tG~~~~~l~~~~~~~~~~v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~vv~  131 (247)
T PRK15451         54 VQPGTQVYDLGC-S-LGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVL  131 (247)
T ss_pred             CCCCCEEEEEcc-c-CCHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEeCChhhCCCCCCCEEeh
Confidence            568899999994 3 366666666531  368999999999988777542    2111111111111111 235788775


Q ss_pred             CCC----C-------cHHHHHhhccCCEEEEEcC
Q 023273          221 AVG----Q-------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       221 ~~g----~-------~~~~~~~l~~~G~~v~~g~  243 (284)
                      +..    .       ++.+.+.|+++|.+++...
T Consensus       132 ~~~l~~l~~~~~~~~l~~i~~~LkpGG~l~l~e~  165 (247)
T PRK15451        132 NFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK  165 (247)
T ss_pred             hhHHHhCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence            432    1       2678899999999998764

>PRK04457 spermidine synthase; Provisional

Probab=93.44  E-value=0.82  Score=39.06  Aligned_cols=90  Identities=18%  Similarity=0.223  Sum_probs=59.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc-CC----c--EEeeCCCcc-cccCCCcccEEE-
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-GA----D--LAIDYTKEN-IEDLPEKFDVVF-  219 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~-g~----~--~~~~~~~~~-~~~~~~~~d~vi-  219 (284)
                      .+..+||++|+  +.|..+..+++...+.++++++.+++-.+.+++. +.    .  +++..+... +....+.+|+|+ 
T Consensus        65 ~~~~~vL~IG~--G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~  142 (262)
T PRK04457         65 PRPQHILQIGL--GGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILV  142 (262)
T ss_pred             CCCCEEEEECC--CHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEE
Confidence            45678999993  3466777777765568999999999999888763 21    1  222222111 222345799876 


Q ss_pred             eCCC-C-----------cHHHHHhhccCCEEEE
Q 023273          220 DAVG-Q-----------CDKALKAVKEGGRVVS  240 (284)
Q Consensus       220 d~~g-~-----------~~~~~~~l~~~G~~v~  240 (284)
                      |... .           ++.+.++|+++|.++.
T Consensus       143 D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi  175 (262)
T PRK04457        143 DGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV  175 (262)
T ss_pred             eCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence            4322 1           2678889999999986

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=93.44  E-value=0.31  Score=42.34  Aligned_cols=93  Identities=16%  Similarity=0.193  Sum_probs=53.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCCh---hhHHHH-HHcC---Cc-EE--eeCCC-cccccCCCccc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSST---AKLDLL-RSLG---AD-LA--IDYTK-ENIEDLPEKFD  216 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~---~~~~~~-~~~g---~~-~~--~~~~~-~~~~~~~~~~d  216 (284)
                      ..+++++|+| +|++|.+++..+... |++ ++++.+++   ++.+.+ +++.   .. .+  .+..+ +.+...-..+|
T Consensus       124 ~~~k~vlI~G-AGGagrAia~~La~~-G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~D  201 (289)
T PRK12548        124 VKGKKLTVIG-AGGAATAIQVQCALD-GAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSD  201 (289)
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCC
Confidence            3578999999 589999988777664 775 88888875   444333 2232   11 11  22211 11222234679


Q ss_pred             EEEeCCCC---c--H---H-HHHhhccCCEEEEEcC
Q 023273          217 VVFDAVGQ---C--D---K-ALKAVKEGGRVVSIIG  243 (284)
Q Consensus       217 ~vid~~g~---~--~---~-~~~~l~~~G~~v~~g~  243 (284)
                      ++|+|+..   +  .   . ....+++...++.+-.
T Consensus       202 ilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY  237 (289)
T PRK12548        202 ILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVY  237 (289)
T ss_pred             EEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecC
Confidence            99998741   1  1   1 2345666666655543

>PRK09134 short chain dehydrogenase; Provisional

Probab=93.44  E-value=0.56  Score=39.53  Aligned_cols=35  Identities=20%  Similarity=0.190  Sum_probs=29.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      .+.+++|+|++|++|...++.+... |++++++.+.
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~-g~~v~~~~~~   42 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAH-GFDVAVHYNR   42 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCC
Confidence            4678999999999999988877774 8888877653

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.44  E-value=0.52  Score=43.54  Aligned_cols=70  Identities=30%  Similarity=0.474  Sum_probs=46.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh-hhH----HHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKL----DLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~  224 (284)
                      .+++++|+| .|.+|+.++..+... |++|++.+..+ +..    +.+...+.........+   ...+++|+|+.++|.
T Consensus         4 ~~k~v~iiG-~g~~G~~~A~~l~~~-G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~d~vv~~~g~   78 (450)
T PRK14106          4 KGKKVLVVG-AGVSGLALAKFLKKL-GAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE---EFLEGVDLVVVSPGV   78 (450)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch---hHhhcCCEEEECCCC
Confidence            478999999 666999999888884 99999998864 222    22334454322211111   223579999998883

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.43  E-value=0.7  Score=39.88  Aligned_cols=94  Identities=18%  Similarity=0.220  Sum_probs=65.6

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc
Q 023273          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (284)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (284)
                      ..||+.......++..++ -.|++++|+|.+..+|.-.+.++... ++.|.++....+.                   +.
T Consensus       143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~-~atVtv~hs~T~~-------------------l~  202 (287)
T PRK14176        143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNR-NATVSVCHVFTDD-------------------LK  202 (287)
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHC-CCEEEEEeccCCC-------------------HH
Confidence            456665555555555554 48999999998888999999999884 8888777643221                   22


Q ss_pred             cCCCcccEEEeCCCCcH-HHHHhhccCCEEEEEcCC
Q 023273          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       210 ~~~~~~d~vid~~g~~~-~~~~~l~~~G~~v~~g~~  244 (284)
                      +..+..|+++.++|-++ ---+.++++..++.+|..
T Consensus       203 ~~~~~ADIvv~AvG~p~~i~~~~vk~gavVIDvGin  238 (287)
T PRK14176        203 KYTLDADILVVATGVKHLIKADMVKEGAVIFDVGIT  238 (287)
T ss_pred             HHHhhCCEEEEccCCccccCHHHcCCCcEEEEeccc
Confidence            23467899999998642 233578888888888763

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.39  E-value=0.65  Score=40.05  Aligned_cols=95  Identities=23%  Similarity=0.272  Sum_probs=64.9

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc
Q 023273          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (284)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (284)
                      ..||+.......++..++ -.|.+++|+|.+..+|.-.+.++... +++|+++....                   .++.
T Consensus       137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~-~atVt~~hs~t-------------------~~l~  196 (285)
T PRK14189        137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQA-GATVTICHSKT-------------------RDLA  196 (285)
T ss_pred             CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEecCCC-------------------CCHH
Confidence            346555444444554443 47999999998777799999999884 88888754321                   1233


Q ss_pred             cCCCcccEEEeCCCCcH-HHHHhhccCCEEEEEcCCC
Q 023273          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       210 ~~~~~~d~vid~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (284)
                      +..+..|+++.++|.++ ---+.++++..++.+|...
T Consensus       197 ~~~~~ADIVV~avG~~~~i~~~~ik~gavVIDVGin~  233 (285)
T PRK14189        197 AHTRQADIVVAAVGKRNVLTADMVKPGATVIDVGMNR  233 (285)
T ss_pred             HHhhhCCEEEEcCCCcCccCHHHcCCCCEEEEccccc
Confidence            33467899999998631 1227889998888888653

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=93.37  E-value=0.4  Score=40.16  Aligned_cols=36  Identities=28%  Similarity=0.401  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      .+++++|+|++|.+|...++..... |.++++++++.
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~-G~~v~~~~~~~   42 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEA-GAKVIGFDQAF   42 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecch
Confidence            5689999999999999999888774 99999998865

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=93.37  E-value=0.65  Score=43.91  Aligned_cols=85  Identities=25%  Similarity=0.413  Sum_probs=60.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~-----  224 (284)
                      .|++|.|+| .|.+|...++.++. +|.+|++.++... .+...+++... .    +++.+.....|+|+-+...     
T Consensus       137 ~gktvgIiG-~G~IG~~vA~~l~~-fG~~V~~~d~~~~-~~~~~~~g~~~-~----~~l~ell~~aDvV~l~lPlt~~T~  208 (525)
T TIGR01327       137 YGKTLGVIG-LGRIGSIVAKRAKA-FGMKVLAYDPYIS-PERAEQLGVEL-V----DDLDELLARADFITVHTPLTPETR  208 (525)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEECCCCC-hhHHHhcCCEE-c----CCHHHHHhhCCEEEEccCCChhhc
Confidence            578999999 99999999999998 5999999987422 22334455321 1    1234445678998877652     


Q ss_pred             --c-HHHHHhhccCCEEEEEc
Q 023273          225 --C-DKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g  242 (284)
                        . ...+..|+++..+|.++
T Consensus       209 ~li~~~~l~~mk~ga~lIN~a  229 (525)
T TIGR01327       209 GLIGAEELAKMKKGVIIVNCA  229 (525)
T ss_pred             cCcCHHHHhcCCCCeEEEEcC
Confidence              1 56788899988888775

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.35  E-value=0.26  Score=41.04  Aligned_cols=42  Identities=21%  Similarity=0.335  Sum_probs=34.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+.+++|+|++|++|...+..+... |++|+++++++++.+..
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~-G~~Vi~~~r~~~~~~~~   47 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKE-GVNVGLLARTEENLKAV   47 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4678999999999999988887774 89999999987765443

>PRK06436 glycerate dehydrogenase; Provisional

Probab=93.34  E-value=0.81  Score=40.01  Aligned_cols=82  Identities=30%  Similarity=0.355  Sum_probs=57.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC----
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~----  224 (284)
                      -.|++|.|+| .|.+|...++.++. +|++|++.+++...      .+.....    .++.+.....|+++.+...    
T Consensus       120 L~gktvgIiG-~G~IG~~vA~~l~a-fG~~V~~~~r~~~~------~~~~~~~----~~l~ell~~aDiv~~~lp~t~~T  187 (303)
T PRK06436        120 LYNKSLGILG-YGGIGRRVALLAKA-FGMNIYAYTRSYVN------DGISSIY----MEPEDIMKKSDFVLISLPLTDET  187 (303)
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHH-CCCEEEEECCCCcc------cCccccc----CCHHHHHhhCCEEEECCCCCchh
Confidence            3589999999 99999999999998 49999999876321      1211111    1233445678988887652    


Q ss_pred             ----cHHHHHhhccCCEEEEEc
Q 023273          225 ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ----~~~~~~~l~~~G~~v~~g  242 (284)
                          ....+..|+++..+|.++
T Consensus       188 ~~li~~~~l~~mk~ga~lIN~s  209 (303)
T PRK06436        188 RGMINSKMLSLFRKGLAIINVA  209 (303)
T ss_pred             hcCcCHHHHhcCCCCeEEEECC
Confidence                156788888888777665

>PRK06141 ornithine cyclodeaminase; Validated

Probab=93.33  E-value=1  Score=39.63  Aligned_cols=94  Identities=17%  Similarity=0.140  Sum_probs=57.7

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHH-hcCCeEEEEeCChhhHHHHH-Hc---CCcEEeeCCCcccccCCCcccEEEe
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKH-VFGASKVAATSSTAKLDLLR-SL---GADLAIDYTKENIEDLPEKFDVVFD  220 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~-~~g~~vi~~~~~~~~~~~~~-~~---g~~~~~~~~~~~~~~~~~~~d~vid  220 (284)
                      .......+++|+| +|.+|.+.+..... .+..++.+..+++++.+.+. ++   +..... .  .+..+.-.+.|+|+.
T Consensus       120 La~~~~~~v~iiG-~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-~--~~~~~av~~aDIVi~  195 (314)
T PRK06141        120 LARKDASRLLVVG-TGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-V--TDLEAAVRQADIISC  195 (314)
T ss_pred             hCCCCCceEEEEC-CcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-e--CCHHHHHhcCCEEEE
Confidence            3345678999999 89999998864443 23467889999988866553 33   311111 1  112223468999999


Q ss_pred             CCCCcHH--HHHhhccCCEEEEEcC
Q 023273          221 AVGQCDK--ALKAVKEGGRVVSIIG  243 (284)
Q Consensus       221 ~~g~~~~--~~~~l~~~G~~v~~g~  243 (284)
                      ++.+..-  --+.++++-.+..+|.
T Consensus       196 aT~s~~pvl~~~~l~~g~~i~~ig~  220 (314)
T PRK06141        196 ATLSTEPLVRGEWLKPGTHLDLVGN  220 (314)
T ss_pred             eeCCCCCEecHHHcCCCCEEEeeCC
Confidence            8875321  1256777665544443

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=93.32  E-value=0.22  Score=41.76  Aligned_cols=42  Identities=29%  Similarity=0.378  Sum_probs=34.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~  193 (284)
                      +.++||+|++|.+|...+...... |.+|+++++++++.+.+.
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~   42 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAA-GANVVVNDLGEAGAEAAA   42 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence            357999999999999999888774 889999999877665553

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=93.32  E-value=0.16  Score=45.61  Aligned_cols=74  Identities=18%  Similarity=0.188  Sum_probs=45.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-cccccCCCcccEEEeCCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~d~vid~~g  223 (284)
                      ..+++|+|+|++|-+|...+..+... |.+|+++++..........+..... .|-.+ ..+.....++|+||++++
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~-G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa   94 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAE-GHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA   94 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhC-CCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence            46789999999999999999999884 9999999875322110001111111 11111 112222357899999874

>COG2521 Predicted archaeal methyltransferase [General function prediction only]

Probab=93.29  E-value=0.31  Score=40.47  Aligned_cols=103  Identities=20%  Similarity=0.323  Sum_probs=65.4

Q ss_pred             HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH--cC------CcEEeeCCC-cccc
Q 023273          139 AYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS--LG------ADLAIDYTK-ENIE  209 (284)
Q Consensus       139 a~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~--~g------~~~~~~~~~-~~~~  209 (284)
                      +..=+...+++.|++||-+  |+++|..|+..++. ++.+|+.+..++.-+++++-  +.      +-.++.-+. +-.+
T Consensus       123 t~~Kv~~V~~~~G~rVLDt--C~GLGYtAi~a~~r-GA~~VitvEkdp~VLeLa~lNPwSr~l~~~~i~iilGD~~e~V~  199 (287)
T COG2521         123 TLAKVELVKVKRGERVLDT--CTGLGYTAIEALER-GAIHVITVEKDPNVLELAKLNPWSRELFEIAIKIILGDAYEVVK  199 (287)
T ss_pred             HHhhhheeccccCCEeeee--ccCccHHHHHHHHc-CCcEEEEEeeCCCeEEeeccCCCCccccccccEEecccHHHHHh
Confidence            4333445677889999886  89999999999987 45588888877765554421  11      111221111 1122


Q ss_pred             cC-CCcccEEEe------CCCC------cHHHHHhhccCCEEEEEcCC
Q 023273          210 DL-PEKFDVVFD------AVGQ------CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       210 ~~-~~~~d~vid------~~g~------~~~~~~~l~~~G~~v~~g~~  244 (284)
                      +. .+.||++|.      -+|.      +.+..+.|+++|++..+-+.
T Consensus       200 ~~~D~sfDaIiHDPPRfS~AgeLYseefY~El~RiLkrgGrlFHYvG~  247 (287)
T COG2521         200 DFDDESFDAIIHDPPRFSLAGELYSEEFYRELYRILKRGGRLFHYVGN  247 (287)
T ss_pred             cCCccccceEeeCCCccchhhhHhHHHHHHHHHHHcCcCCcEEEEeCC
Confidence            22 345888874      2343      27899999999999987443

>PRK08655 prephenate dehydrogenase; Provisional

Probab=93.28  E-value=0.53  Score=43.42  Aligned_cols=44  Identities=25%  Similarity=0.509  Sum_probs=35.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH-HHHHHcCC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-DLLRSLGA  197 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~-~~~~~~g~  197 (284)
                      +|.|+|+.|.+|.+.+..++.. |.+|++.++++++. +.+.+.|.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~-G~~V~v~~r~~~~~~~~a~~~gv   46 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEK-GFEVIVTGRDPKKGKEVAKELGV   46 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHC-CCEEEEEECChHHHHHHHHHcCC
Confidence            6889987899999999988884 88999999887774 44556664

>PLN02214 cinnamoyl-CoA reductase

Probab=93.27  E-value=0.3  Score=43.40  Aligned_cols=74  Identities=19%  Similarity=0.275  Sum_probs=47.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHH--HHHHcC---C-cEEeeCC---CcccccCCCcccEEE
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD--LLRSLG---A-DLAIDYT---KENIEDLPEKFDVVF  219 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~--~~~~~g---~-~~~~~~~---~~~~~~~~~~~d~vi  219 (284)
                      ..+++|+|+|++|.+|...+..+... |.+|++++++.++..  ..+.+.   . ..++..+   ...+.+.-+++|+||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   86 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLER-GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVF   86 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence            35679999999999999998888874 899999988765422  122221   1 1122111   112223345799999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      .+++
T Consensus        87 h~A~   90 (342)
T PLN02214         87 HTAS   90 (342)
T ss_pred             EecC
Confidence            9986

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.24  E-value=0.79  Score=39.55  Aligned_cols=94  Identities=20%  Similarity=0.180  Sum_probs=66.2

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc
Q 023273          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (284)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (284)
                      ..||+....+..++..++ -.|++++|+|.+..+|.-.+.++... ++.|+++-+...                   ++.
T Consensus       138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~-~atVtv~hs~T~-------------------~l~  197 (285)
T PRK10792        138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLA-GCTVTVCHRFTK-------------------NLR  197 (285)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHC-CCeEEEEECCCC-------------------CHH
Confidence            346666555556655544 46999999997777999999999884 888887765322                   122


Q ss_pred             cCCCcccEEEeCCCCcH-HHHHhhccCCEEEEEcCC
Q 023273          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       210 ~~~~~~d~vid~~g~~~-~~~~~l~~~G~~v~~g~~  244 (284)
                      +..+..|+++.++|.++ -.-+.++++..++.+|..
T Consensus       198 ~~~~~ADIvi~avG~p~~v~~~~vk~gavVIDvGin  233 (285)
T PRK10792        198 HHVRNADLLVVAVGKPGFIPGEWIKPGAIVIDVGIN  233 (285)
T ss_pred             HHHhhCCEEEEcCCCcccccHHHcCCCcEEEEcccc
Confidence            33467899999999642 223678888888888844

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.22  E-value=0.46  Score=39.74  Aligned_cols=42  Identities=26%  Similarity=0.423  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~  192 (284)
                      .+.+++|+|++|++|...+...... |+++++..+ ++++.+.+
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~-G~~vv~~~~~~~~~~~~~   46 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFARE-GARVVVNYHQSEDAAEAL   46 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHH
Confidence            3578999999999999988887774 889887654 44444333

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.19  E-value=0.57  Score=40.86  Aligned_cols=35  Identities=29%  Similarity=0.395  Sum_probs=29.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      .+.+++|+|+++++|...++..... |++|++.++.
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~-Ga~Vv~~~~~   45 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARL-GATVVVNDVA   45 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCC
Confidence            5789999999999999988877774 8999988764

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=93.19  E-value=1.7  Score=34.53  Aligned_cols=90  Identities=23%  Similarity=0.290  Sum_probs=56.2

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-EEeeCCCcccccCCCcccEEEeC
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~d~vid~  221 (284)
                      ...++++|+-+|+  +.|..+..+++.  +.+++.++.+++..+.+++    .+.. .++..+.  .....+.+|+|+.+
T Consensus        16 ~~~~~~~vLdlG~--G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~--~~~~~~~fD~Vi~n   89 (179)
T TIGR00537        16 RELKPDDVLEIGA--GTGLVAIRLKGK--GKCILTTDINPFAVKELRENAKLNNVGLDVVMTDL--FKGVRGKFDVILFN   89 (179)
T ss_pred             HhcCCCeEEEeCC--ChhHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCceEEEEccc--ccccCCcccEEEEC
Confidence            3455678999883  556666677765  3489999999988777654    2221 2222221  11123478988754


Q ss_pred             CC-----------------------C-------cHHHHHhhccCCEEEEEc
Q 023273          222 VG-----------------------Q-------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       222 ~g-----------------------~-------~~~~~~~l~~~G~~v~~g  242 (284)
                      ..                       +       .+.+.+.|+++|+++++.
T Consensus        90 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~~~~~~  140 (179)
T TIGR00537        90 PPYLPLEDDLRRGDWLDVAIDGGKDGRKVIDRFLDELPEILKEGGRVQLIQ  140 (179)
T ss_pred             CCCCCCcchhcccchhhhhhhcCCchHHHHHHHHHhHHHhhCCCCEEEEEE
Confidence            21                       0       245678999999998775

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=93.15  E-value=0.64  Score=40.05  Aligned_cols=65  Identities=15%  Similarity=0.148  Sum_probs=46.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      +|.|+| .|.+|...+..++.. |.+|++.++++++.+.+.+.|.......   +.. .....|+||-|+.
T Consensus         2 ~I~IIG-~G~mG~sla~~L~~~-g~~V~~~d~~~~~~~~a~~~g~~~~~~~---~~~-~~~~aDlVilavp   66 (279)
T PRK07417          2 KIGIVG-LGLIGGSLGLDLRSL-GHTVYGVSRRESTCERAIERGLVDEAST---DLS-LLKDCDLVILALP   66 (279)
T ss_pred             eEEEEe-ecHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCCcccccC---CHh-HhcCCCEEEEcCC
Confidence            688999 899999888877774 8899999999998888877764211111   111 2356788888776

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=93.13  E-value=0.83  Score=40.27  Aligned_cols=86  Identities=22%  Similarity=0.306  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC-C---
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q---  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g-~---  224 (284)
                      ..|++|.|+| .|.+|...++-++. +++.+....+...+.+...+.++.      ..++.+.....|+++-|.. +   
T Consensus       160 ~~gK~vgilG-~G~IG~~ia~rL~~-Fg~~i~y~~r~~~~~~~~~~~~~~------~~d~~~~~~~sD~ivv~~pLt~~T  231 (336)
T KOG0069|consen  160 LEGKTVGILG-LGRIGKAIAKRLKP-FGCVILYHSRTQLPPEEAYEYYAE------FVDIEELLANSDVIVVNCPLTKET  231 (336)
T ss_pred             ccCCEEEEec-CcHHHHHHHHhhhh-ccceeeeecccCCchhhHHHhccc------ccCHHHHHhhCCEEEEecCCCHHH
Confidence            3588999999 89999999999999 686566666666666666665554      2334555667888765543 2   


Q ss_pred             --c--HHHHHhhccCCEEEEEc
Q 023273          225 --C--DKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 --~--~~~~~~l~~~G~~v~~g  242 (284)
                        .  ...+..|++++.+|-++
T Consensus       232 ~~liNk~~~~~mk~g~vlVN~a  253 (336)
T KOG0069|consen  232 RHLINKKFIEKMKDGAVLVNTA  253 (336)
T ss_pred             HHHhhHHHHHhcCCCeEEEecc
Confidence              1  68999999999998775

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=93.12  E-value=1.6  Score=40.06  Aligned_cols=97  Identities=21%  Similarity=0.150  Sum_probs=59.6

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EE--eeCCCccccc--CCCc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LA--IDYTKENIED--LPEK  214 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~--~~~~~~~~~~--~~~~  214 (284)
                      ....+.+|++||-+|+  +.|..+..+++.+++.++++++.++++++.++    .+|.. .+  .+.+......  ..+.
T Consensus       232 ~~L~~~~g~~VLDlca--g~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~~~~~~~  309 (426)
T TIGR00563       232 TWLAPQNEETILDACA--APGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQWAENEQ  309 (426)
T ss_pred             HHhCCCCCCeEEEeCC--CccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccccccccccc
Confidence            4456789999998874  33444555555543478999999999887664    35543 22  2211111111  1346


Q ss_pred             ccEEEe---CCC--Cc--------------------------HHHHHhhccCCEEEEEc
Q 023273          215 FDVVFD---AVG--QC--------------------------DKALKAVKEGGRVVSII  242 (284)
Q Consensus       215 ~d~vid---~~g--~~--------------------------~~~~~~l~~~G~~v~~g  242 (284)
                      ||.||-   |+|  ..                          ..+++.|+++|+++...
T Consensus       310 fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvyst  368 (426)
T TIGR00563       310 FDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYAT  368 (426)
T ss_pred             cCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            998863   444  11                          24788899999998653

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PLN00198 anthocyanidin reductase; Provisional

Probab=93.12  E-value=0.46  Score=41.97  Aligned_cols=74  Identities=23%  Similarity=0.325  Sum_probs=47.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH---HHc---CCcEEeeC--CC-cccccCCCcccEEE
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL---RSL---GADLAIDY--TK-ENIEDLPEKFDVVF  219 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~---~~~---g~~~~~~~--~~-~~~~~~~~~~d~vi  219 (284)
                      ..+.+|+|+|++|.+|...+..+... |.+|+++.++.++....   ..+   +.-.++.-  .+ +.+.+.-+++|.||
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   85 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQK-GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVF   85 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHC-CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence            34789999999999999999988884 89998888765443322   111   11122221  11 12223335789999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      .+++
T Consensus        86 h~A~   89 (338)
T PLN00198         86 HVAT   89 (338)
T ss_pred             EeCC
Confidence            9876

>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional

Probab=93.12  E-value=1.1  Score=38.52  Aligned_cols=92  Identities=14%  Similarity=0.181  Sum_probs=59.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhc---CCeEEEEeCChhhHHHHHHcCCc-EEeeCCCcccccCCCcccEEEeCCC-
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVF---GASKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPEKFDVVFDAVG-  223 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~---g~~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~d~vid~~g-  223 (284)
                      .+.++||-+|+  +.|..+..+++...   +..++.++.+++-.+.+++.... ..+..+...++-..+.+|+|+.... 
T Consensus        84 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~~~v~giD~s~~~l~~A~~~~~~~~~~~~d~~~lp~~~~sfD~I~~~~~~  161 (272)
T PRK11088         84 EKATALLDIGC--GEGYYTHALADALPEITTMQLFGLDISKVAIKYAAKRYPQVTFCVASSHRLPFADQSLDAIIRIYAP  161 (272)
T ss_pred             CCCCeEEEECC--cCCHHHHHHHHhcccccCCeEEEECCCHHHHHHHHHhCCCCeEEEeecccCCCcCCceeEEEEecCC
Confidence            35578888883  45666666666531   24789999999888888654321 2222221222222356999987643 


Q ss_pred             -CcHHHHHhhccCCEEEEEc
Q 023273          224 -QCDKALKAVKEGGRVVSII  242 (284)
Q Consensus       224 -~~~~~~~~l~~~G~~v~~g  242 (284)
                       ....+.+.|+++|+++.+.
T Consensus       162 ~~~~e~~rvLkpgG~li~~~  181 (272)
T PRK11088        162 CKAEELARVVKPGGIVITVT  181 (272)
T ss_pred             CCHHHHHhhccCCCEEEEEe
Confidence             2578899999999999874

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=93.09  E-value=0.62  Score=38.62  Aligned_cols=37  Identities=30%  Similarity=0.442  Sum_probs=30.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhH
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKL  189 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~  189 (284)
                      +++||+|++|++|...++.+... |++++++.+ ++++.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~   38 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKD-GYRVAANCGPNEERA   38 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHH
Confidence            46899999999999988888874 899988887 44433

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PLN02686 cinnamoyl-CoA reductase

Probab=93.09  E-value=0.38  Score=43.24  Aligned_cols=45  Identities=20%  Similarity=0.229  Sum_probs=36.0

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~  193 (284)
                      ...+++|||+|++|.+|...+..+... |.+|+++.++.++.+.++
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~-G~~V~~~~r~~~~~~~l~   94 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRH-GYSVRIAVDTQEDKEKLR   94 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence            355789999999999999999988874 999988887766554443

>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism]

Probab=93.08  E-value=0.39  Score=40.55  Aligned_cols=89  Identities=25%  Similarity=0.344  Sum_probs=62.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC---------cEEeeCCCcccccCCCcccEEEeC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA---------DLAIDYTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~---------~~~~~~~~~~~~~~~~~~d~vid~  221 (284)
                      |.+||-+| | +-|++..-+|+.  |+.|..++.+++..+.+++.-.         .+.+++...+.+...+.||.|+..
T Consensus        90 g~~ilDvG-C-GgGLLSepLArl--ga~V~GID~s~~~V~vA~~h~~~dP~~~~~~~y~l~~~~~~~E~~~~~fDaVvcs  165 (282)
T KOG1270|consen   90 GMKILDVG-C-GGGLLSEPLARL--GAQVTGIDASDDMVEVANEHKKMDPVLEGAIAYRLEYEDTDVEGLTGKFDAVVCS  165 (282)
T ss_pred             CceEEEec-c-CccccchhhHhh--CCeeEeecccHHHHHHHHHhhhcCchhccccceeeehhhcchhhcccccceeeeH
Confidence            47888888 3 348899999996  8999999999998888865321         112444444444555669988754


Q ss_pred             -----CCCc----HHHHHhhccCCEEEEEcC
Q 023273          222 -----VGQC----DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       222 -----~g~~----~~~~~~l~~~G~~v~~g~  243 (284)
                           +-++    +.+++.|+|+|++++...
T Consensus       166 evleHV~dp~~~l~~l~~~lkP~G~lfitti  196 (282)
T KOG1270|consen  166 EVLEHVKDPQEFLNCLSALLKPNGRLFITTI  196 (282)
T ss_pred             HHHHHHhCHHHHHHHHHHHhCCCCceEeeeh
Confidence                 2232    678899999999987643

>PRK00536 speE spermidine synthase; Provisional

Probab=93.06  E-value=0.55  Score=40.05  Aligned_cols=92  Identities=20%  Similarity=0.163  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc--EEeeCCC----cccccC-CCcccEEE-e
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAIDYTK----ENIEDL-PEKFDVVF-D  220 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~--~~~~~~~----~~~~~~-~~~~d~vi-d  220 (284)
                      ...++|||+|  |+=|.++-+++|+ . .+|..++.+++-.+.++++-+.  ..++...    ..+.+. .+.+|+|| |
T Consensus        71 ~~pk~VLIiG--GGDGg~~REvLkh-~-~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvD  146 (262)
T PRK00536         71 KELKEVLIVD--GFDLELAHQLFKY-D-THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICL  146 (262)
T ss_pred             CCCCeEEEEc--CCchHHHHHHHCc-C-CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEc
Confidence            4458999998  5667788899998 3 4899999999888888773321  0011000    011121 35799876 5


Q ss_pred             CCCC---cHHHHHhhccCCEEEEEcCC
Q 023273          221 AVGQ---CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       221 ~~g~---~~~~~~~l~~~G~~v~~g~~  244 (284)
                      .+-+   ++.+.++|+++|.++.=+++
T Consensus       147 s~~~~~fy~~~~~~L~~~Gi~v~Qs~s  173 (262)
T PRK00536        147 QEPDIHKIDGLKRMLKEDGVFISVAKH  173 (262)
T ss_pred             CCCChHHHHHHHHhcCCCcEEEECCCC
Confidence            3332   37899999999999976554

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=93.04  E-value=1.1  Score=39.10  Aligned_cols=87  Identities=14%  Similarity=0.206  Sum_probs=53.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc-CCcEEeeCCCc-------ccccCCCcccEEEeCCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-GADLAIDYTKE-------NIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~-g~~~~~~~~~~-------~~~~~~~~~d~vid~~g  223 (284)
                      .+|+|+| +|++|...+..+... |.+|..+.++.++.+.+++- |.. +.+....       ......+.+|++|-|+-
T Consensus         3 m~I~IiG-aGaiG~~~a~~L~~~-G~~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~~~~~~~~~~~~~~~~~~D~viv~vK   79 (305)
T PRK05708          3 MTWHILG-AGSLGSLWACRLARA-GLPVRLILRDRQRLAAYQQAGGLT-LVEQGQASLYAIPAETADAAEPIHRLLLACK   79 (305)
T ss_pred             ceEEEEC-CCHHHHHHHHHHHhC-CCCeEEEEechHHHHHHhhcCCeE-EeeCCcceeeccCCCCcccccccCEEEEECC
Confidence            4799999 899997655555553 88999999988777777643 321 1111100       00111347899998875


Q ss_pred             Cc------HHHHHhhccCCEEEEE
Q 023273          224 QC------DKALKAVKEGGRVVSI  241 (284)
Q Consensus       224 ~~------~~~~~~l~~~G~~v~~  241 (284)
                      ++      ..+...+.++..++.+
T Consensus        80 ~~~~~~al~~l~~~l~~~t~vv~l  103 (305)
T PRK05708         80 AYDAEPAVASLAHRLAPGAELLLL  103 (305)
T ss_pred             HHhHHHHHHHHHhhCCCCCEEEEE
Confidence            42      3344455667766665

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=93.02  E-value=0.79  Score=39.75  Aligned_cols=73  Identities=15%  Similarity=0.176  Sum_probs=42.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh---hHHHH-HHcCCc-----EEeeCCCc-ccccCCCcccEEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA---KLDLL-RSLGAD-----LAIDYTKE-NIEDLPEKFDVVF  219 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~---~~~~~-~~~g~~-----~~~~~~~~-~~~~~~~~~d~vi  219 (284)
                      .+++++|+| +|+.+.+++..+...+..+++++.++++   |.+.+ +.++..     .+...... .+......+|+++
T Consensus       123 ~~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI  201 (288)
T PRK12749        123 KGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT  201 (288)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence            567999999 6888888666555542347888888743   44433 333211     11111110 1122235789999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +|+.
T Consensus       202 NaTp  205 (288)
T PRK12749        202 NGTK  205 (288)
T ss_pred             ECCC
Confidence            9874

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=92.99  E-value=0.73  Score=40.67  Aligned_cols=103  Identities=19%  Similarity=0.257  Sum_probs=64.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~-----  224 (284)
                      |++|-|+| .|.+|..+++.++. +|.+|++.++ .++....  ..+..     ..+.+.+.....|++...+.-     
T Consensus       142 gkTvGIiG-~G~IG~~va~~l~a-fgm~v~~~d~~~~~~~~~--~~~~~-----~~~~Ld~lL~~sDiv~lh~PlT~eT~  212 (324)
T COG0111         142 GKTVGIIG-LGRIGRAVAKRLKA-FGMKVIGYDPYSPRERAG--VDGVV-----GVDSLDELLAEADILTLHLPLTPETR  212 (324)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHh-CCCeEEEECCCCchhhhc--cccce-----ecccHHHHHhhCCEEEEcCCCCcchh
Confidence            88999999 99999999999999 5999999998 3322221  11110     011233344556776655431     


Q ss_pred             ---cHHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHHHHHHHHHHCCCee
Q 023273          225 ---CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (284)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  274 (284)
                         -...+..|+++..+|-++--.            -=+-+.+++.+++|+|.
T Consensus       213 g~i~~~~~a~MK~gailIN~aRG~------------vVde~aL~~AL~~G~i~  253 (324)
T COG0111         213 GLINAEELAKMKPGAILINAARGG------------VVDEDALLAALDSGKIA  253 (324)
T ss_pred             cccCHHHHhhCCCCeEEEECCCcc------------eecHHHHHHHHHcCCcc
Confidence               157777888777666554111            11334566667777765

>PRK07023 short chain dehydrogenase; Provisional

Probab=92.94  E-value=0.28  Score=40.96  Aligned_cols=36  Identities=17%  Similarity=0.263  Sum_probs=30.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      .+++|+|++|++|...++..... |+++++++++.++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~-G~~v~~~~r~~~~   37 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQP-GIAVLGVARSRHP   37 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhC-CCEEEEEecCcch
Confidence            37999999999999999888774 9999999886554

>PRK03612 spermidine synthase; Provisional

Probab=92.93  E-value=0.46  Score=44.85  Aligned_cols=91  Identities=22%  Similarity=0.265  Sum_probs=58.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHHcC------------C-cEEeeCCCcc-cccCCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLG------------A-DLAIDYTKEN-IEDLPE  213 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~g------------~-~~~~~~~~~~-~~~~~~  213 (284)
                      ++.++||++|+  +.|..+.++++. .. .++++++.+++-.+.+++.-            + .+++..+... .....+
T Consensus       296 ~~~~rVL~IG~--G~G~~~~~ll~~-~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~~~~  372 (521)
T PRK03612        296 ARPRRVLVLGG--GDGLALREVLKY-PDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRKLAE  372 (521)
T ss_pred             CCCCeEEEEcC--CccHHHHHHHhC-CCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHHHHHHhCCC
Confidence            45678999984  456677777775 45 69999999999888887621            0 0122221111 122246


Q ss_pred             cccEEEeCCCC--------------cHHHHHhhccCCEEEEEc
Q 023273          214 KFDVVFDAVGQ--------------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       214 ~~d~vid~~g~--------------~~~~~~~l~~~G~~v~~g  242 (284)
                      .+|+|+.....              .+.+.++|+++|.++.-.
T Consensus       373 ~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~  415 (521)
T PRK03612        373 KFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS  415 (521)
T ss_pred             CCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence            89998743221              157788999999998654

>PRK10901 16S rRNA methyltransferase B; Provisional

Probab=92.88  E-value=1.9  Score=39.59  Aligned_cols=98  Identities=19%  Similarity=0.211  Sum_probs=60.0

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-EEeeCCCccccc-C-CCcc
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIED-L-PEKF  215 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~-~-~~~~  215 (284)
                      ....++.+|++||-+|+  +.|..+..++....+.+++.++.++++.+.+++    .|.. .++..+...... . .+.+
T Consensus       237 ~~~l~~~~g~~VLDlga--G~G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~~~~~~~~~~~~f  314 (427)
T PRK10901        237 ATLLAPQNGERVLDACA--APGGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGDARDPAQWWDGQPF  314 (427)
T ss_pred             HHHcCCCCCCEEEEeCC--CCChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCcccchhhcccCCC
Confidence            34556789999999874  334445566665324689999999998877743    4432 233322221111 1 3469


Q ss_pred             cEEE-e--CCCC----------------------------cHHHHHhhccCCEEEEEc
Q 023273          216 DVVF-D--AVGQ----------------------------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       216 d~vi-d--~~g~----------------------------~~~~~~~l~~~G~~v~~g  242 (284)
                      |.|+ |  |+|.                            +..+++.|+++|+++...
T Consensus       315 D~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvyst  372 (427)
T PRK10901        315 DRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYAT  372 (427)
T ss_pred             CEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            9887 2  3331                            136778899999998544

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.87  E-value=1.4  Score=38.36  Aligned_cols=94  Identities=20%  Similarity=0.209  Sum_probs=64.2

Q ss_pred             cccchHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEe-CChhhHHHHHHcCCcEEeeCCCccc
Q 023273          131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENI  208 (284)
Q Consensus       131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~-~~~~~~~~~~~~g~~~~~~~~~~~~  208 (284)
                      .+||+....+..++..+ --.|++|+|+|.++.+|.-.+.++... |+.|+++. ++.+                    .
T Consensus       137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~-g~tVtv~~~rT~~--------------------l  195 (296)
T PRK14188        137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAA-NATVTIAHSRTRD--------------------L  195 (296)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhC-CCEEEEECCCCCC--------------------H
Confidence            35666544555555444 357999999999999999999888874 89888884 3321                    1


Q ss_pred             ccCCCcccEEEeCCCCcHHHHH-hhccCCEEEEEcCCC
Q 023273          209 EDLPEKFDVVFDAVGQCDKALK-AVKEGGRVVSIIGSV  245 (284)
Q Consensus       209 ~~~~~~~d~vid~~g~~~~~~~-~l~~~G~~v~~g~~~  245 (284)
                      .+..+..|+++.++|..+..-. .++++..++.+|...
T Consensus       196 ~e~~~~ADIVIsavg~~~~v~~~~lk~GavVIDvGin~  233 (296)
T PRK14188        196 PAVCRRADILVAAVGRPEMVKGDWIKPGATVIDVGINR  233 (296)
T ss_pred             HHHHhcCCEEEEecCChhhcchheecCCCEEEEcCCcc
Confidence            2223568999999987533222 377888888887643

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.85  E-value=0.73  Score=38.20  Aligned_cols=37  Identities=30%  Similarity=0.395  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      +.+++||+|++|.+|...+..+... |.+++++.++.+
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~-g~~v~~~~~~~~   41 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARA-GADVVVHYRSDE   41 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCCH
Confidence            4568999999999999999988874 888877666443

>KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism]

Probab=92.83  E-value=1.7  Score=36.67  Aligned_cols=100  Identities=20%  Similarity=0.246  Sum_probs=63.3

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcC------CeEEEEeCChhhHHHHHHc----C--Cc---EEeeCCCccccc
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFG------ASKVAATSSTAKLDLLRSL----G--AD---LAIDYTKENIED  210 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g------~~vi~~~~~~~~~~~~~~~----g--~~---~~~~~~~~~~~~  210 (284)
                      .++..++++|-++  |++|-.|-.+.++...      .+|++++.+++.++..++.    +  +.   ..+..+.++++-
T Consensus        96 L~p~~~m~~lDva--GGTGDiaFril~~v~s~~~~~~~~V~v~Dinp~mL~vgkqRa~~~~l~~~~~~~w~~~dAE~LpF  173 (296)
T KOG1540|consen   96 LGPGKGMKVLDVA--GGTGDIAFRILRHVKSQFGDRESKVTVLDINPHMLAVGKQRAKKRPLKASSRVEWVEGDAEDLPF  173 (296)
T ss_pred             cCCCCCCeEEEec--CCcchhHHHHHHhhccccCCCCceEEEEeCCHHHHHHHHHHHhhcCCCcCCceEEEeCCcccCCC
Confidence            4556677777664  6667777777776533      6899999999977666432    2  22   112223333332


Q ss_pred             CCCcccEEEeCCC-----C----cHHHHHhhccCCEEEEEcCCCCC
Q 023273          211 LPEKFDVVFDAVG-----Q----CDKALKAVKEGGRVVSIIGSVTP  247 (284)
Q Consensus       211 ~~~~~d~vid~~g-----~----~~~~~~~l~~~G~~v~~g~~~~~  247 (284)
                      -...+|.+--+.|     +    .+.+.+.|+++|||..+..+..+
T Consensus       174 dd~s~D~yTiafGIRN~th~~k~l~EAYRVLKpGGrf~cLeFskv~  219 (296)
T KOG1540|consen  174 DDDSFDAYTIAFGIRNVTHIQKALREAYRVLKPGGRFSCLEFSKVE  219 (296)
T ss_pred             CCCcceeEEEecceecCCCHHHHHHHHHHhcCCCcEEEEEEccccc
Confidence            1345777655555     2    37899999999999988776533

>PRK08309 short chain dehydrogenase; Provisional

Probab=92.79  E-value=4.2  Score=32.50  Aligned_cols=129  Identities=19%  Similarity=0.245  Sum_probs=70.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCC---cEE--eeCCCc-cccc-------CCCcccEE
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGA---DLA--IDYTKE-NIED-------LPEKFDVV  218 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~---~~~--~~~~~~-~~~~-------~~~~~d~v  218 (284)
                      +++|+|++| +|...++.... .|++|+++.+++++.+.+.. +..   ...  .|..+. ....       ..+.+|.+
T Consensus         2 ~vlVtGGtG-~gg~la~~L~~-~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          2 HALVIGGTG-MLKRVSLWLCE-KGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             EEEEECcCH-HHHHHHHHHHH-CcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            689999875 44444444444 38999999998877665543 321   111  132221 1111       13578999


Q ss_pred             EeCCCC--cHHHHHhhccCC------EEEEEcCCCCC-C----------c---ee----EEEec-------cHHHHHHHH
Q 023273          219 FDAVGQ--CDKALKAVKEGG------RVVSIIGSVTP-P----------A---SS----FVLTS-------DGSILEKLN  265 (284)
Q Consensus       219 id~~g~--~~~~~~~l~~~G------~~v~~g~~~~~-~----------~---~~----~~~~~-------~~~~~~~~~  265 (284)
                      |+....  ++......+..|      +++.+-++... .          .   ..    |....       -.|.-+-++
T Consensus        80 v~~vh~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~~~~~~~~~~~~~~~~~i~lgf~~~~~~~rwlt~~ei~~gv~  159 (177)
T PRK08309         80 VAWIHSSAKDALSVVCRELDGSSETYRLFHVLGSAASDPRIPSEKIGPARCSYRRVILGFVLEDTYSRWLTHEEISDGVI  159 (177)
T ss_pred             EEeccccchhhHHHHHHHHccCCCCceEEEEeCCcCCchhhhhhhhhhcCCceEEEEEeEEEeCCccccCchHHHHHHHH
Confidence            988763  344444444444      46666443321 1          0   01    11111       246778899


Q ss_pred             HHHHCCCeeEeecccccC
Q 023273          266 PYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       266 ~~~~~g~i~~~i~~~~~~  283 (284)
                      +.++.+.=...+..+=||
T Consensus       160 ~~~~~~~~~~~~g~~~pw  177 (177)
T PRK08309        160 KAIESDADEHVVGTVEPW  177 (177)
T ss_pred             HHHhcCCCeEEEEEecCC
Confidence            999887666666555443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	284
2vn8_A	375	Crystal Structure Of Human Reticulon 4 Interacting		9e-28
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		1e-25
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		1e-24
4dvj_A	363	Crystal Structure Of A Putative Zinc-Dependent Alco		3e-21
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		5e-21
3gaz_A	343	Crystal Structure Of An Alcohol Dehydrogenase Super		8e-21
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		1e-19
3b6z_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Comple		4e-17
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		5e-17
3gqv_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant		1e-16
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		6e-16
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		2e-15
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		3e-15
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		4e-15
3goh_A	315	Crystal Structure Of Alcohol Dehydrogenase Superfam		4e-15
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		1e-14
4a0s_A	447	Structure Of The 2-Octenoyl-Coa Carboxylase Reducta		2e-14
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		9e-14
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		1e-13
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		1e-13
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		2e-13
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		3e-13
2cf2_D	295	Architecture Of Mammalian Fatty Acid Synthase Lengt		7e-13
1iyz_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		7e-13
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		1e-12
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		3e-11
3hzz_A	467	2.4 Angstrom Crystal Structure Of Streptomyces Coll		4e-11
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		4e-11
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		1e-10
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		1e-10
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		1e-10
3gms_A	340	Crystal Structure Of Putative Nadph:quinone Reducta		1e-10
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-10
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		6e-10
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		6e-10
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		7e-10
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		1e-09
3slk_A	795	Structure Of Ketoreductase And Enoylreductase Didom		3e-09
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		5e-09
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		9e-09
1xa0_A	328	Crystal Structure Of Mcsg Target Apc35536 From Baci		1e-08
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		2e-08
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		4e-08
1zsy_A	357	The Structure Of Human Mitochondrial 2-Enoyl Thioes		4e-08
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		5e-08
2vcy_A	344	Crystal Structure Of 2-Enoyl Thioester Reductase Of		5e-08
1iz0_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		1e-07
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		2e-07
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		3e-07
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		5e-07
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		7e-07
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		1e-06
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		1e-06
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		4e-06
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		1e-05
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		5e-05
1tt7_A	330	Crystal Structure Of Bacillus Subtilis Protein Yhfp		8e-05
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		8e-05
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		8e-05
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		9e-05
4eye_A	342	Crystal Structure Of A Probable Oxidoreductase From		1e-04
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		2e-04
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		2e-04
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		2e-04
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		3e-04
2oui_A	360	D275p Mutant Of Alcohol Dehydrogenase From Protozoa		3e-04
1y9a_A	360	Alcohol Dehydrogenase From Entamoeba Histolotica In		3e-04
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		5e-04
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		6e-04
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		6e-04
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		6e-04
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		7e-04
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		7e-04
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		8e-04
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		9e-04

>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein 1 In Complex With Nadph Length = 375

Iteration: 1
 Score =  120 bits (301), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 127/247 (51%), Gaps = 39/247 (15%)
Query: 3   AWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLG----AFSATD 57
           AWV  +YG ++ VL+F  N+ +P +   ++V++KV AA++NPID     G    A +   
Sbjct: 24  AWVIDKYGKNE-VLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82
Query: 58  SPL---------PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAE 108
            PL         P   G DV+GVV + G  VK FK GDEV+  +       P + G+L+E
Sbjct: 83  DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP------PWKQGTLSE 136
Query: 109 YTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAGGV 163
           +  V  N ++ KPK+L+  +AASLP    TA+  + +          GK +L+LG +GGV
Sbjct: 137 FVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGV 196
Query: 164 GTMVIQLAK----HVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK---FD 216
           GT  IQ+ K    HV               +L+R LGAD  IDY   ++E+  +    FD
Sbjct: 197 GTFAIQVMKAWDAHVTAVCSQDAS------ELVRKLGADDVIDYKSGSVEEQLKSLKPFD 250
Query: 217 VVFDAVG 223
            + D VG
Sbjct: 251 FILDNVG 257

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 126/241 (52%), Gaps = 26/241 (10%)
Query: 18  FET-NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVG 76
           F+T N+++P  +  ++L+K+ + ++NP+D K+ L   S      P + G+D  GVVE VG
Sbjct: 20  FKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSKA----PRVLGFDAIGVVESVG 75
Query: 77  SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT 136
           ++V  F  GD VY          P +NGS AEY  + E L+A  PKN+S  +A SLPL  
Sbjct: 76  NEVTMFNQGDIVYYS------GSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTG 129
Query: 137 ETAYE------GLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXL 189
            TAYE      G+ R+   + GK++L++ GAGGVG++  Q+AK  +G            +
Sbjct: 130 ITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAK-AYGLRVITTASRNETI 188
Query: 190 DLLRSLGADLAIDYTKENIEDLP----EKFDVVFDAVGQ---CDKALKAVKEGGRVVSII 242
           +  + +GAD+ +++ +  +        E  D VF         D  ++ VK  G + +I+
Sbjct: 189 EWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIV 248
Query: 243 G 243
Sbjct: 249 A 249

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 129/246 (52%), Gaps = 15/246 (6%)
Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGA-FSATD--S 58
           KA  + ++G  + VLK   +   P  R++Q LIKV AA+LNPID+K   G+ F A    +
Sbjct: 8   KAIQFDQFGPPK-VLKL-VDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKN 65
Query: 59  PLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLA 118
            LP+  GYD +G V ++GS V    +GD+V G       DHP      AEY     + + 
Sbjct: 66  NLPSGLGYDFSGEVIELGSDVNNVNIGDKVXGIAGFP--DHP---CCYAEYVCASPDTII 120
Query: 119 LKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXX 178
            K + LSF++AASLP A  TA + L ++    G  +L+  GAGGVG + IQLAK      
Sbjct: 121 QKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQ--KGT 178
Query: 179 XXXXXXXXXXLDLLRSLGADLAIDYTKEN-IEDLPEKFDVVFDAVGQ--CDKALKAVKEG 235
                        L++LGA+  I+Y +E+ +  +    D V D VG     +++  +KE 
Sbjct: 179 TVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQSIDCLKET 238
Query: 236 GRVVSI 241
           G +VS+
Sbjct: 239 GCIVSV 244

>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol Dehydrogenase Protein From Rhizobium Etli Cfn 42 Length = 363

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 101/190 (53%), Gaps = 20/190 (10%)
Query: 25  PSLREDQVLIKVVAAALNPIDFK-RMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83
           P+     +L++V A ++NP+D+K R       TD     + GYD AG+V  VG  V  F+
Sbjct: 48  PAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDW---KVIGYDAAGIVSAVGPDVTLFR 104
Query: 84  VGDEVY--GDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141
            GDEV+  G I         R G+ AE+  V+E ++  KPK L + EAA+LPL + TA+E
Sbjct: 105 PGDEVFYAGSI--------IRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWE 156
Query: 142 G------LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSL 195
                  + +    A  +IL++GGAGGVG++ +Q+A+                 + ++SL
Sbjct: 157 AFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL 216
Query: 196 GADLAIDYTK 205
           GA   ID++K
Sbjct: 217 GAHHVIDHSK 226

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 123/253 (48%), Gaps = 21/253 (8%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A    E+G  + VLK  +++ VP  ++ QVLIKV A  +NP++     G +S     L
Sbjct: 30  MRAVRVFEFGGPE-VLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS-RKPLL 87
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P  PG DVAGV+E VG     FK GD V+             +G  AEY    ++ +   
Sbjct: 88  PYTPGSDVAGVIEAVGDNASAFKKGDRVF--------TSSTISGGYAEYALAADHTVYKL 139
Query: 121 PKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGXXX 179
           P+ L F + A++ +   TAY  L  SA   AG+S+LV G +GGVG    Q+A+  +G   
Sbjct: 140 PEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIAR-AYGLKI 198
Query: 180 XXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVGQCD--KALKA 231
                      ++   GA    ++ + N  D  +K+      D++ + +   +  K L  
Sbjct: 199 LGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSL 258
Query: 232 VKEGGRVVSIIGS 244
           +  GGRV+ ++GS
Sbjct: 259 LSHGGRVI-VVGS 270

>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily Protein From Novosphingobium Aromaticivorans Length = 343

Iteration: 1
 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 119/231 (51%), Gaps = 23/231 (9%)
Query: 25  PSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKV 84
           P     QVL+++ A+  NP+D K   G       PLP I G D+AG V  VG +V  F+V
Sbjct: 28  PQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGXDLAGTVVAVGPEVDSFRV 87
Query: 85  GDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL- 143
           GD V+G             G+ A++ AV+  LLA KP  L+  +A+ LPL   TA+EGL 
Sbjct: 88  GDAVFGLTGGVG----GLQGTHAQFAAVDARLLASKPAALTXRQASVLPLVFITAWEGLV 143
Query: 144 ERSAFSAGKSILVLGGAGGVGTMVIQLA----KHVFGXXXXXXXXXXXXLDLLRSLGADL 199
           +R+    G+++L+ GG GGVG + IQ+A      VF             L+ +R LGA  
Sbjct: 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVF------ATARGSDLEYVRDLGAT- 196
Query: 200 AIDYTKENIEDLPEK-----FDVVFDAVGQ--CDKALKAVKEGGRVVSIIG 243
            ID ++E  +   E      FD+V+D +G    D +  AVK  G VVS +G
Sbjct: 197 PIDASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLG 247

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 152/325 (46%), Gaps = 60/325 (18%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A V +  G  + VL+   ++ VP     +V +++ AAALN +D     G  S    PL
Sbjct: 1   MRAVVMRARGGPE-VLEV-ADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVAS-PKLPL 57
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN--------EKAL--------------D 98
           P + G D +GVV+ VG  V+ F  GDEV   IN        E+ L              +
Sbjct: 58  PHVLGADGSGVVDAVGPGVEGFAPGDEVV--INPGLSCGRCERCLAGEDNLCPRYQILGE 115
Query: 99  HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG-LERSAFSAGKSILVL 157
           H  R+G+ AEY  + E  LA KPKNLSF EAA++PL   TA++  +++     G  +LV+
Sbjct: 116 H--RHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVM 173
Query: 158 GGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKF-- 215
               GV    IQ+AK +FG            L   ++LGAD  ++YT     D P++   
Sbjct: 174 AAGSGVSVAAIQIAK-LFGARVIATAGSEDKLRRAKALGADETVNYTH---PDWPKEVRR 229
Query: 216 -------DVVFDAVGQC--DKALKAVKEGGRVVSIIGSVT------PPASSF-----VLT 255
                  D V D  G    +  +KA   GGR ++I G+ +      P A  F     +L 
Sbjct: 230 LTGGKGADKVVDHTGALYFEGVIKATANGGR-IAIAGASSGYEGTLPFAHVFYRQLSILG 288
Query: 256 SDGSILEKLNP---YFESGKVKAII 277
           S  +   +L P   + E GK+K ++
Sbjct: 289 STMASKSRLFPILRFVEEGKLKPVV 313

>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa Length = 371

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 24  VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83
            P L  DQV ++V A A+NP D K M G F+   + L    G D AG V  VGS V   +
Sbjct: 31  CPMLPRDQVYVRVEAVAINPSDTK-MRGQFATPWAFL----GTDYAGTVVAVGSDVTHIQ 85
Query: 84  VGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETA---- 139
           VGD VYG  NE     P + G+ ++YT     + A  PK LSF +AA+LP    TA    
Sbjct: 86  VGDRVYGAQNEMCPRTPDQ-GAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAM 144
Query: 140 -YEGLERSAFSAGKS--------ILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLD 190
              GL   + SA +         +LV GG+    T+ +Q+ +                 D
Sbjct: 145 KLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLR--LSGYIPIATCSPHNFD 202
Query: 191 LLRSLGADLAIDYTKENI 208
           L +S GA+   DY   N+
Sbjct: 203 LAKSRGAEEVFDYRAPNL 220

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 16  LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD------SPLPTIPGYDVA 69
           LK E ++ +P  +  QVLIK+ AA +   D     G F            LP   G+++A
Sbjct: 13  LKLE-DIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIA 71
Query: 70  GVVEKVGSQVKKFKVGDEV------------YGDINEKAL-DHPK-----RNGSLAEYTA 111
           G +E+VG +V  +  GD V            Y  I E+ L D P+      +G+ AEY  
Sbjct: 72  GRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGINYDGAYAEYVL 131
Query: 112 VEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLA 171
           V       K + LS VEAA L  +  T Y  + +++    K+++V+G  GG+GTM IQ+A
Sbjct: 132 VPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIA 191
Query: 172 KHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKEN 207
           K V G            L+  +  GAD  I+ + ++
Sbjct: 192 KAVSGATIIGVDVREEALEAAKRAGADYVINASSQD 227

>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s With Bound Nadp Length = 371

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 90/198 (45%), Gaps = 21/198 (10%)
Query: 24  VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83
            P L  DQV ++V A A+NP D   M G F+   + L    G D AG V  VGS V   +
Sbjct: 31  CPMLPRDQVYVRVEAVAINPSD-TSMRGQFATPWAFL----GTDYAGTVVAVGSDVTHIQ 85
Query: 84  VGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETA---- 139
           VGD VYG  NE     P + G+ ++YT     + A  PK LSF +AA+LP    TA    
Sbjct: 86  VGDRVYGAQNEMCPRTPDQ-GAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAM 144
Query: 140 -YEGLERSAFSAGKS--------ILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLD 190
              GL   + SA +         +LV GG+    T+ +Q+ +                 D
Sbjct: 145 KLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLR--LSGYIPIATCSPHNFD 202
Query: 191 LLRSLGADLAIDYTKENI 208
           L +S GA+   DY   N+
Sbjct: 203 LAKSRGAEEVFDYRAPNL 220

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 26/226 (11%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V   YG   + L+ E  V+VP     QVL+K+ A+ +   D     G +     PL
Sbjct: 7   MKAAVVHAYG---APLRIE-EVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWP-VKPPL 61
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------YGDINEKALDHPKRN---- 103
           P IPG++  G V  VGS V + K GD V             +     + L   ++N    
Sbjct: 62  PFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYS 121
Query: 104 --GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
             G  AEY   + N + + PKN+ F E A +  A  T Y+GL+++    G+ +  + G G
Sbjct: 122 VNGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQTNARPGQWV-AISGIG 180
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKEN 207
           G+G + +Q A+   G            L+L R LGA L ++  +E+
Sbjct: 181 GLGHVAVQYAR-AMGLHVAAIDIDDAKLELARKLGASLTVNARQED 225

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 26/226 (11%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V +++   +  LK +  VE P++   +VL+++ A  +   D     G +      L
Sbjct: 1   MKAAVVEQF---KEPLKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPK-L 55
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV----------YGDI----NEKALDHPKR---- 102
           P IPG++  G+VE+VG  V   KVGD V          + D      E   +H K     
Sbjct: 56  PLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYS 115
Query: 103 -NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
            +G  AEY     + +   P NLSF EAA +  A  T Y+ L+ +    G+ + +  G G
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIY-GIG 174
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKEN 207
           G+G + +Q AK   G            L+L + LGADL ++  KE+
Sbjct: 175 GLGHVAVQYAK-AMGLNVVAVDIGDEKLELAKELGADLVVNPLKED 219

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 115/268 (42%), Gaps = 45/268 (16%)
Query: 24  VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83
           VP   E  ++++ +A +LN  D K +L      D   P +P  D +GVVE VG  V +F+
Sbjct: 48  VPEAGEHDIIVRTLAVSLNYRD-KLVLETGXGLDLAFPFVPASDXSGVVEAVGKSVTRFR 106
Query: 84  VGDEVYGDINEKALD------------------HPKRNGSLAEYTAVEENLLALKPKNLS 125
            GD V        LD                  HP   G L+EY  + E      PK+L 
Sbjct: 107 PGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHP---GVLSEYVVLPEGWFVAAPKSLD 163
Query: 126 FVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXX 184
             EA++LP A  TA+  L E+    AG  ++V  G GGV    +Q+AK   G        
Sbjct: 164 AAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQ-GTGGVALFGLQIAKAT-GAEVIVTSS 221
Query: 185 XXXXLDLLRSLGADLAIDYTKENIEDLPEKF---------DVVFDAVGQC--DKALKAVK 233
               LD   +LGAD  I+  +   ED  E+          D + +  G     ++LKAV 
Sbjct: 222 SREKLDRAFALGADHGINRLE---EDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVA 278
Query: 234 EGGRVVSIIG-----SVTPPASSFVLTS 256
             GR +S+IG      V+ P    +L S
Sbjct: 279 PDGR-ISVIGVLEGFEVSGPVGPLLLKS 305

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 26/226 (11%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V +++   +  LK +  VE P++   +VL+++ A  +   D     G +      L
Sbjct: 1   MKAAVVEQF---KEPLKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPK-L 55
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV----------YGDI----NEKALDHPKR---- 102
           P IPG++  G+VE+VG  V   KVGD V          + D      E   +H K     
Sbjct: 56  PLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYS 115
Query: 103 -NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
            +G  AEY     + +   P NLSF EAA +  A  T Y+ L+ +    G+ + +  G G
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIY-GIG 174
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKEN 207
           G G + +Q AK   G            L+L + LGADL ++  KE+
Sbjct: 175 GFGHVAVQYAK-AMGLNVVAVDIGDEKLELAKELGADLVVNPLKED 219

>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily Protein (np_718042.1) From Shewanella Oneidensis At 1.55 A Resolution Length = 315

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 118/251 (47%), Gaps = 25/251 (9%)
Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLP 61
           + W Y+   +S ++     +V++P+L  D +L++  A  +NP+D+K +    +  +    
Sbjct: 6   QVWAYQTKTHSVTL----NSVDIPALAADDILVQNQAIGINPVDWKFIKA--NPINWSNG 59
Query: 62  TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKP 121
            +PG D AGV+ KVG++V    +G  V    + K      R+GS AE+T +  + +   P
Sbjct: 60  HVPGVDGAGVIVKVGAKVDSKXLGRRVAYHTSLK------RHGSFAEFTVLNTDRVXTLP 113
Query: 122 KNLSFVEAASLPLATETAYEGLERSAFSAGKSILVL--GGAGGVGTMVIQLAKHVFGXXX 179
            NLSF  AA+LP    TA++  E+   +  + +L++  G    + T  +  A +V     
Sbjct: 114 DNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQXLNNAGYVVDLVS 173
Query: 180 XXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKA--LKAVKEGGR 237
                      L ++L A   + +       + +K+  +FDAV   + A  + ++K  G 
Sbjct: 174 A---------SLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNSQNAAALVPSLKANGH 224
Query: 238 VVSIIGSVTPP 248
           ++ I   +  P
Sbjct: 225 IICIQDRIPAP 235

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 93/221 (42%), Gaps = 26/221 (11%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V + +G   ++      V +P     Q+ + + A+ +   D     G +    +P 
Sbjct: 26  MKAAVVRAFGKPLTI----DEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNP- 80
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKR------------------ 102
           P IPG++  G V  VGS VK  K GD V       A  H +                   
Sbjct: 81  PFIPGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQLNTGYS 140
Query: 103 -NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
            NG  AEY   + N +   PKN+ F E A +  A  T Y+GL+ +    G  + V+ G G
Sbjct: 141 VNGGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVYKGLKVTDTKPGDWV-VISGIG 199
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID 202
           G+G M +Q A+   G            LDL R LGA + ++
Sbjct: 200 GLGHMAVQYAR-AMGLNVAAVDIDDRKLDLARRLGATVTVN 239

>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf In Complex With Nadp And 2-Octenoyl-Coa Length = 447

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 137/329 (41%), Gaps = 80/329 (24%)
Query: 22  VEVPSLREDQVLIKVVAAALN----------PI-------DFKRMLGAFSATDSPLPTIP 64
           V +P L  D+VL+ V+A+++N          PI          R  G  +  D P   + 
Sbjct: 55  VPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVL- 113
Query: 65  GYDVAGVVEKVGSQVKKFKVGDEV--------------YGD----INEKALDHPKRNGSL 106
           G D +GVV + G  V+++K GD V              +GD      ++A       G L
Sbjct: 114 GSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGL 173
Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL--ERSA-FSAGKSILVLGGAGGV 163
           AEY  V  + L  KP +L++ EAA  PL   TAY  L  +R A    G  +L+ G +GG+
Sbjct: 174 AEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGL 233
Query: 164 GTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTK----ENIEDLPEKF---- 215
           G+  IQ  K+  G               +R+LG DL I+  +    ++I D P +     
Sbjct: 234 GSYAIQFVKNGGGIPVAVVSSAQKEA-AVRALGCDLVINRAELGITDDIADDPRRVVETG 292
Query: 216 ---------------DVVFDAVGQCDKALKAV--KEGGRVVSIIGSVTPPASSF------ 252
                          D+VF+  G+    L  +  + GG VV+  GS +    +F      
Sbjct: 293 RKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVT-CGSSSGYLHTFDNRYLW 351
Query: 253 -----VLTSDGSILEK---LNPYFESGKV 273
                ++ S G+  E+    N  FESG V
Sbjct: 352 MKLKKIVGSHGANHEEQQATNRLFESGAV 380

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 123/291 (42%), Gaps = 34/291 (11%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP- 59
           M+A V   +G    +  F     +P  ++ ++ I+V A  LN ID     G     D+P 
Sbjct: 4   MRAVVLAGFGGLNKLRLFRK--AMPEPQDGELKIRVKACGLNFIDLMVRQGNI---DNPP 58
Query: 60  -LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLA 118
             P +PG++ +G+VE +G  VK +++GD V   +N  A          AE        + 
Sbjct: 59  KTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNA---------WAEVVCTPVEFVY 109
Query: 119 LKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAK----- 172
             P ++SF EAA+ P+   TAY  L E +    G S+LV    GGVG  V QL       
Sbjct: 110 KIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNV 169
Query: 173 HVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG--QCDKALK 230
            VFG             D +  L  D   DY +E      E  D+V D +      K L 
Sbjct: 170 TVFGTASTFKHEAIK--DSVTHL-FDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLS 226
Query: 231 AVKEGGRVVSIIGS---VTPPASSFV-LTSDGSILEKLNP--YFESGKVKA 275
            +K  G  + + GS   VT    SF         +EK+NP   +E  KV A
Sbjct: 227 LLKPLGTYI-LYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIA 276

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 116/259 (44%), Gaps = 29/259 (11%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP--LPTIPGYDVAGVVEKVGSQV 79
           V  PS  E +VL+KV A+ALN  D  +  G +   D P     I G + +G V ++G   
Sbjct: 26  VAKPSPGEGEVLLKVAASALNRADLMQRQGQY---DPPPGASNILGLEASGHVAELGPGC 82
Query: 80  K-KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATET 138
           +  +K+GD     +           G  A+Y  V E LL   P+ L+  +AA++P A  T
Sbjct: 83  QGHWKIGDTAMALL---------PGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLT 133
Query: 139 AYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGA 197
           A++ L       AG  +L+  G  GVGT  IQL + + G            L +   LGA
Sbjct: 134 AFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTR-MAGAIPLVTAGSQKKLQMAEKLGA 192
Query: 198 DLAIDYTKENIEDLPEKF------DVVFDAVG--QCDKALKAVKEGGRVV--SIIGS--V 245
               +Y KE+  +   KF      +++ D +G    +K +  +   GR V   ++G   +
Sbjct: 193 AAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDI 252
Query: 246 TPPASSFVLTSDGSILEKL 264
             P  S +L   GS++  L
Sbjct: 253 NGPLFSKLLFKRGSLITSL 271

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 116/259 (44%), Gaps = 29/259 (11%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP--LPTIPGYDVAGVVEKVGSQV 79
           V  PS  E +VL+KV A+ALN  D  +  G +   D P     I G + +G V ++G   
Sbjct: 42  VAKPSPGEGEVLLKVAASALNRADLMQRQGQY---DPPPGASNILGLEASGHVAELGPGC 98
Query: 80  K-KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATET 138
           +  +K+GD     +           G  A+Y  V E LL   P+ L+  +AA++P A  T
Sbjct: 99  QGHWKIGDTAMALL---------PGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLT 149
Query: 139 AYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGA 197
           A++ L       AG  +L+  G  GVGT  IQL + + G            L +   LGA
Sbjct: 150 AFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTR-MAGAIPLVTAGSQKKLQMAEKLGA 208
Query: 198 DLAIDYTKENIEDLPEKF------DVVFDAVG--QCDKALKAVKEGGRVV--SIIGS--V 245
               +Y KE+  +   KF      +++ D +G    +K +  +   GR V   ++G   +
Sbjct: 209 AAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDI 268
Query: 246 TPPASSFVLTSDGSILEKL 264
             P  S +L   GS++  L
Sbjct: 269 NGPLFSKLLFKRGSLITSL 287

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 24  VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83
           +P   E +VL++  A  +N  D  +  G++       P + G +++G +  VG  V  + 
Sbjct: 50  LPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPIL-GLELSGEIVGVGPGVSGYA 108
Query: 84  VGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL 143
           VGD+V G  N          G+ AEY  +    +   PK    V+AA+LP    T +  L
Sbjct: 109 VGDKVCGLAN---------GGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANL 159
Query: 144 -ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID 202
            + +  + G+S+L+ GG  G+GT  IQLA+  FG             +    LGA   I+
Sbjct: 160 FQXAGLTEGESVLIHGGTSGIGTTAIQLAR-AFGAEVYATAGSTGKCEACERLGAKRGIN 218
Query: 203 YTKENI-----EDLPEKFDVVFDAVG 223
           Y  E+       +  +  D++ D +G
Sbjct: 219 YRSEDFAAVIKAETGQGVDIILDXIG 244

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V + +G   ++      V VP     QV +K+ A+ +   D     G +    + L
Sbjct: 3   MKAAVVRAFGAPLTI----DEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPT-L 57
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV------------------YGDINEKALDHPKR 102
           P IPG++  G V  VGS V + K GD V                  +  + EK  +    
Sbjct: 58  PFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYS 117
Query: 103 -NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
            NG   EY   + N + L P  + FVE A +  A  T Y+GL+ +    G+ + V+ G G
Sbjct: 118 VNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTDTRPGQWV-VISGIG 176
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID 202
           G+G + +Q A+   G            L+L R LGA++A++
Sbjct: 177 GLGHVAVQYAR-AMGLRVAAVDIDDAKLNLARRLGAEVAVN 216

>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase Length = 295

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 113/248 (45%), Gaps = 38/248 (15%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWV K  G    +     ++  P   E +V+++V A  LN  D    LGA+     P 
Sbjct: 1   MKAWVLKRLGGPLEL----VDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP- 55
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P IPG +V GVVE               Y  +  +        G LAE  AV +  L   
Sbjct: 56  PFIPGMEVVGVVE------------GRRYAALVPQ--------GGLAERVAVPKGALLPL 95
Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXX 180
           P+ LS  EAA+ P++  TAY  L+R+    G+ +LV   AG +GT  +Q+A+   G    
Sbjct: 96  PEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVAR-AMGLRVL 154
Query: 181 XXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK------FDVVFDAVG-QCDKALKAVK 233
                   L L  +LGA+ A  Y      ++PE+       D+V +  G + +++L  + 
Sbjct: 155 AAASRPEKLALPLALGAEEAATYA-----EVPERAKAWGGLDLVLEVRGKEVEESLGLLA 209
Query: 234 EGGRVVSI 241
            GGR+V I
Sbjct: 210 HGGRLVYI 217

>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 113/248 (45%), Gaps = 38/248 (15%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWV K  G    +     ++  P   E +V+++V A  LN  D    LGA+     P 
Sbjct: 1   MKAWVLKRLGGPLEL----VDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP- 55
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P IPG +V GVVE               Y  +  +        G LAE  AV +  L   
Sbjct: 56  PFIPGMEVVGVVE------------GRRYAALVPQ--------GGLAERVAVPKGALLPL 95
Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXX 180
           P+ LS  EAA+ P++  TAY  L+R+    G+ +LV   AG +GT  +Q+A+   G    
Sbjct: 96  PEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVAR-AMGLRVL 154
Query: 181 XXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK------FDVVFDAVG-QCDKALKAVK 233
                   L L  +LGA+ A  Y      ++PE+       D+V +  G + +++L  + 
Sbjct: 155 AAASRPEKLALPLALGAEEAATYA-----EVPERAKAWGGLDLVLEVRGKEVEESLGLLA 209
Query: 234 EGGRVVSI 241
            GGR+V I
Sbjct: 210 HGGRLVYI 217

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 12  SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPT----IPGYD 67
           S   L+++ ++ VP  + +++LI V  + +   D     G     D PLP     + G++
Sbjct: 14  SHGKLEYK-DIPVPKPKANELLINVKYSGVCHTDLHAWHG-----DWPLPVKLPLVGGHE 67
Query: 68  VAGVVEKVGSQVKKFKVGDEV-------------YGDI-NEKALDHP-----KRNGSLAE 108
            AGVV  +G  VK +K+GD               Y ++ NE    H        +GS  +
Sbjct: 68  GAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQ 127
Query: 109 YTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVI 168
           Y   +    A  P+     + A +  A  T Y+ L+ +   AG  + + G AGG+G++ +
Sbjct: 128 YATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAV 187
Query: 169 QLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKE 206
           Q AK   G             +L RS+G ++ ID+TKE
Sbjct: 188 QYAK-AMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKE 224

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 110/241 (45%), Gaps = 39/241 (16%)
Query: 32  VLIKVVAAALNPIDFKRMLGAFSATDSPLPTIP---GYDVAGVVEKVGSQVKKFKVGDEV 88
           V+++  A  LN ID     G +     P P +P   G + AGVVE VG +V +FKVGD V
Sbjct: 31  VVVRNKAIGLNFIDTYYRSGLY-----PAPFLPSGLGAEGAGVVEAVGDEVTRFKVGDRV 85
Query: 89  -YGDINEKALDHPKRNGSLAEYTAV----EENLLALKPKNLSFVEAASLPLATETAYEGL 143
            YG             G L  Y+ V    E NL+ L   ++SF +AA+L L   T  + L
Sbjct: 86  AYG------------TGPLGAYSEVHVLPEANLVKLA-DSVSFEQAAALMLKGLTV-QYL 131
Query: 144 ERSAFSA--GKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI 201
            R  +    G+ IL    AGGVG++  Q AK   G                ++LGA   I
Sbjct: 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAK-ALGAKLIGTVSSPEKAAHAKALGAWETI 190
Query: 202 DYTKENIEDL------PEKFDVVFDAVGQCD--KALKAVKEGGRVVSIIGSVTPPASSFV 253
           DY+ E++          +K  VV+D VGQ     +L +V   G VVS  G+ + P S   
Sbjct: 191 DYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVS-FGNASGPVSGVN 249
Query: 254 L 254
           L
Sbjct: 250 L 250

>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus Crotonyl Coa CarboxylaseREDUCTASE Length = 467

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 94/223 (42%), Gaps = 40/223 (17%)
Query: 22  VEVPSLREDQVLIKVVAAALN----------PID---FKRMLGAFS----ATDSPLPTIP 64
           V VP L   + L+ V+A+++N          P+    F    G  S      D P   I 
Sbjct: 81  VPVPELGPGEALVAVMASSVNYNSVWTSIFEPVSTFAFLERYGKLSPLTKRHDLPYHII- 139
Query: 65  GYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRN------------------GSL 106
           G D+AGVV + G  V  ++ GDEV        L+ P  +                  G L
Sbjct: 140 GSDLAGVVLRTGPGVNAWQPGDEVVAHCLSVELESPDGHDDTMLDPEQRIWGFETNFGGL 199
Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL---ERSAFSAGKSILVLGGAGGV 163
           AE   V+ N L  KPK+L++ EAA+  L   TAY  L     +A   G ++L+ G +GG+
Sbjct: 200 AEIALVKTNQLMPKPKHLTWEEAAAPGLVNSTAYRQLVSRNGAAMKQGDNVLIWGASGGL 259
Query: 164 GTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKE 206
           G+   Q A    G             ++ RS+GA+  ID   E
Sbjct: 260 GSYATQFAL-AGGANPICVVSSPQKAEICRSMGAEAIIDRNAE 301

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 63/291 (21%)
Query: 21  NVEVPSLREDQVLIKVVAAALN----------PID---FKRMLGAFS--ATDSPLP-TIP 64
           +V VP L   + L+ V+A+++N          P+    F    G  S  A    LP  + 
Sbjct: 62  DVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVI 121
Query: 65  GYDVAGVVEKVGSQVKKFKVGDEVYGDI-----------NEKALDHPKR-------NGSL 106
           G D+AGVV + G  V  ++ GDEV               N+  LD  +R        G L
Sbjct: 122 GSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGL 181
Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL---ERSAFSAGKSILVLGGAGGV 163
           AE   V+ N L  KP +LS+ EAA+  L   TAY  L     +    G ++L+ G +GG+
Sbjct: 182 AEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGL 241
Query: 164 GTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID--------YTKENIEDLPEKF 215
           G+   Q A    G             ++ R++GA+  ID        +  EN +D P+++
Sbjct: 242 GSYATQFAL-AGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQD-PKEW 299
Query: 216 DVVFDAVGQCDKALKAVKE--GGRVVSII----GSVTPPASSFVLTSDGSI 260
                      +  K ++E  GG  + I+    G  T  AS FV    G+I
Sbjct: 300 ----------KRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTI 340

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 11  NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAG 70
           N +  +    +  VP   +  +L++     +N  D     G +  +  P P   G++  G
Sbjct: 35  NFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP-PFDIGFEGIG 93
Query: 71  VVEKVG-SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL----ALKPKNLS 125
            V  +G S   ++ VG  V       A   P   GS AEYT V  ++     ++KP+ L+
Sbjct: 94  EVVALGLSASARYTVGQAV-------AYMAP---GSFAEYTVVPASIATPVPSVKPEYLT 143
Query: 126 FVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAK----HVFGXXXX 180
            + + +      TAY  L E    S GK +LV   AGG G   +QL+K    HV G    
Sbjct: 144 LLVSGT------TAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS 197
Query: 181 XXXXXXXXLDLLRSLGADLAIDYTKENI-----EDLPEKFDVVFDAVG--QCDKALKAVK 233
                      L+SLG D  I+Y  E +     ++ PE  DVV+++VG    D A+ A+ 
Sbjct: 198 DEKSA-----FLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALA 252
Query: 234 EGGRVVSI 241
             GR++ I
Sbjct: 253 TKGRLIVI 260

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 102/253 (40%), Gaps = 44/253 (17%)
Query: 21  NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
           NV +P    D +L+KV A  +   D   + G F +T    P   G++  G+V + GS V+
Sbjct: 39  NVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTP---PVTLGHEFCGIVVEAGSAVR 95
Query: 81  KFKVGDEVYGDINEKALDHPK------------------RNGSLAEYTAVE-----ENLL 117
               G  + GD N      P+                  R+G  AEY  V      E  L
Sbjct: 96  DIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPL 155
Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGX 177
            L P + +F E    PLA      G++ S   AG ++ +LGG G +G + +QLA+     
Sbjct: 156 TLDPVHGAFCE----PLA--CCLHGVDLSGIKAGSTVAILGG-GVIGLLTVQLARLAGAT 208
Query: 178 XXXXXXXXXXXLDLLRSLGADLAIDYTKENIED--------LPEKFDVVFDAVGQCD--- 226
                        L   +GA   +D +  ++ +        +P   DVV +  G  +   
Sbjct: 209 TVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVK 268
Query: 227 KALKAVKEGGRVV 239
           ++ +  K GG VV
Sbjct: 269 QSTRLAKAGGTVV 281

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 11  NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAG 70
           N +  +    +  VP   +  +L++     +N  D     G +  +  P P   G++  G
Sbjct: 14  NFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP-PFDIGFEGIG 72
Query: 71  VVEKVG-SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL----ALKPKNLS 125
            V  +G S   ++ VG  V       A   P   GS AEYT V  ++     ++KP+ L+
Sbjct: 73  EVVALGLSASARYTVGQAV-------AYMAP---GSFAEYTVVPASIATPVPSVKPEYLT 122
Query: 126 FVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAK----HVFGXXXX 180
            + + +      TAY  L E    S GK +LV   AGG G   +QL+K    HV G    
Sbjct: 123 LLVSGT------TAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS 176
Query: 181 XXXXXXXXLDLLRSLGADLAIDYTKENI-----EDLPEKFDVVFDAVG--QCDKALKAVK 233
                      L+SLG D  I+Y  E +     ++ PE  DVV+++VG    D A+ A+ 
Sbjct: 177 DEKSA-----FLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALA 231
Query: 234 EGGRVVSI 241
             GR++ I
Sbjct: 232 TKGRLIVI 239

>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From Bacillus Thuringiensis Length = 340

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 23/230 (10%)
Query: 6   YKEYGNSQSVLKFE-TNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIP 64
           + ++GN + VL+ E  N+E   L++++V ++++   +NP D   + GA+ A   PLP IP
Sbjct: 10  FHKFGNPKDVLQVEYKNIE--PLKDNEVFVRMLVRPINPSDLIPITGAY-AHRIPLPNIP 66
Query: 65  GYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKR-NGSLAEYTAVEENLLALKPKN 123
           GY+  G+VE VG+ V +  +G  V           P R  G+  EY     + +   P +
Sbjct: 67  GYEGVGIVENVGAFVSRELIGKRVL----------PLRGEGTWQEYVKTSADFVVPIPDS 116
Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG-GVGTMVIQLAKHVFGXXXXXX 182
           +    AA + +   TA+     +       +L++   G  +G +  QL++ +        
Sbjct: 117 IDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVT 176
Query: 183 XXXXXXLDLLRSLGADLAIDYTK----ENIEDLPEKF--DVVFDAVGQCD 226
                  +LLR LGA   ID +     E + +L      D   D++G  D
Sbjct: 177 RNNKHTEELLR-LGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPD 225

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 11  NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAG 70
           N +  +    +  VP   +  +L++     +N  D     G +  +  P P   G++  G
Sbjct: 43  NFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP-PFDIGFEGIG 101
Query: 71  VVEKVG-SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL----ALKPKNLS 125
            V  +G S   ++ VG  V       A   P   GS AEYT V  ++     ++KP+ L+
Sbjct: 102 EVVALGLSASARYTVGQAV-------AYMAP---GSFAEYTVVPASIATPVPSVKPEYLT 151
Query: 126 FVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAK----HVFGXXXX 180
            + + +      TAY  L E    S GK +LV   AGG G   +QL+K    HV G    
Sbjct: 152 LLVSGT------TAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS 205
Query: 181 XXXXXXXXLDLLRSLGADLAIDYTKENI-----EDLPEKFDVVFDAVGQC--DKALKAVK 233
                      L+SLG D  I+Y  E +     ++ PE  DVV+++VG    D A+ A+ 
Sbjct: 206 DEKSA-----FLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALA 260
Query: 234 EGGRVVSI 241
             GR++ I
Sbjct: 261 TKGRLIVI 268

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 24  VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD------SPLPTIPGYDVAGVVEKVGS 77
           VP  +  QVLIKV AA +   D     G F            LP   G+++AG +E+VG 
Sbjct: 20  VPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGD 79
Query: 78  QVKKFKVGDEV------------YGDINEKAL-DHPKR-----NGSLAEYTAVEENLLAL 119
           +V  +  GD V            Y  I E+ L D P+      +G+ AEY  V       
Sbjct: 80  EVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMY 139
Query: 120 KPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXX 179
           K + L+ VEAA L  +  T Y  + +++    K++LV+G  GG+GTM +Q+AK V G   
Sbjct: 140 KLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATI 199
Query: 180 XXXXXXXXXLDLLRSLGADLAIDYTKEN 207
                    ++  +  GAD  I+ + ++
Sbjct: 200 IGVDVREEAVEAAKRAGADYVINASMQD 227

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 24  VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD------SPLPTIPGYDVAGVVEKVGS 77
           VP  +  QVLIKV AA +   D     G F            LP   G+++AG +E+VG 
Sbjct: 20  VPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGD 79
Query: 78  QVKKFKVGDEV------------YGDINEKAL-DHPKR-----NGSLAEYTAVEENLLAL 119
           +V  +  GD V            Y  I E+ L D P+      +G+ AEY  V       
Sbjct: 80  EVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMY 139
Query: 120 KPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXX 179
           K + L+ VEAA L  +  T Y  + +++    K++LV+G  GG+GTM +Q+AK V G   
Sbjct: 140 KLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATI 199
Query: 180 XXXXXXXXXLDLLRSLGADLAIDYTKEN 207
                    ++  +  GAD  I+ + ++
Sbjct: 200 IGVDVREEAVEAAKRAGADYVINASMQD 227

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 24  VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD------SPLPTIPGYDVAGVVEKVGS 77
           VP  +  QVLIKV AA +   D     G F            LP   G+++AG +E+VG 
Sbjct: 20  VPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGD 79
Query: 78  QVKKFKVGDEV------------YGDINEKAL-DHPKR-----NGSLAEYTAVEENLLAL 119
           +V  +  GD V            Y  I E+ L D P+      +G+ AEY  V       
Sbjct: 80  EVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMY 139
Query: 120 KPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXX 179
           K + L+ VEAA L  +  T Y  + +++    K++LV+G  GG+GTM +Q+AK V G   
Sbjct: 140 KLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATI 199
Query: 180 XXXXXXXXXLDLLRSLGADLAIDYTKEN 207
                    ++  +  GAD  I+ + ++
Sbjct: 200 IGVDVREEAVEAAKRAGADYVINASMQD 227

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 23  EVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
           E+ +++ ++ L+ +    +   D     G F    +   T+ G++  G+V+++G+ V   
Sbjct: 20  ELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG---NKAGTVLGHEGIGIVKEIGADVSSL 76
Query: 83  KVGDEV--------YGDI------NEKALDHPKR-----NGSLAEYTAVEENLLALKPKN 123
           +VGD V         G        NE      K      +G +AE   V  +     P  
Sbjct: 77  QVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDG 136
Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXX 183
           L  +EA+S+  A  T Y+ ++ S    G   ++ G AGG+G + IQ AK+VFG       
Sbjct: 137 LDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFG-AGGLGNLAIQYAKNVFGAKVIAVD 195
Query: 184 XXXXXLDLLRSLGADLAID 202
                L+L + +GAD+ I+
Sbjct: 196 INQDKLNLAKKIGADVTIN 214

>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 70/149 (46%), Gaps = 16/149 (10%)
Query: 27  LREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGD 86
           L + +V I + AA +N  D    LG +    S      G + AGVV + G  V     GD
Sbjct: 236 LGDGEVRIAMRAAGVNFRDALIALGMYPGVASL-----GSEGAGVVVETGPGVTGLAPGD 290
Query: 87  EVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ER 145
            V G I       PK  G LA     +  ++   P   SF  AAS+P+   TAY  L + 
Sbjct: 291 RVMGMI-------PKAFGPLA---VADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDL 340
Query: 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHV 174
           +    G+S+LV   AGGVG   IQLA+H+
Sbjct: 341 AGLRPGESLLVHSAAGGVGMAAIQLARHL 369

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 23  EVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
           E+ +++ ++ L+ +    +   D     G +    +   T+ G++  G+V+++G+ V   
Sbjct: 20  ELRAIKPNEALLDMEYCGVCHTDLHVAAGDYG---NKAGTVLGHEGIGIVKEIGADVSSL 76
Query: 83  KVGDEV--------YGDI------NEKALDHPKR-----NGSLAEYTAVEENLLALKPKN 123
           +VGD V         G        NE      K      +G +AE   V  +     P  
Sbjct: 77  QVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDG 136
Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXX 183
           L  +EA+S+  A  T Y+ ++ S    G   ++ G AGG+G + IQ AK+VFG       
Sbjct: 137 LDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFG-AGGLGNLAIQYAKNVFGAKVIAVD 195
Query: 184 XXXXXLDLLRSLGADLAID 202
                L+L + +GAD+ I+
Sbjct: 196 INQDKLNLAKKIGADVIIN 214

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 34/228 (14%)
Query: 29  EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIP---GYDVAGVVEKVGSQVKKFKVG 85
           E+++ ++  A  +N ID     G +     P P++P   G + AG+V KVGS VK  K G
Sbjct: 28  ENEIQVENKAIGINFIDTYIRSGLY-----PPPSLPSGLGTEAAGIVSKVGSGVKHIKAG 82
Query: 86  DEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK----PKNLSFVEAASLPLATETAYE 141
           D V                +L  Y++V  N++A K    P  +SF +AA+  L   T Y 
Sbjct: 83  DRVV-----------YAQSALGAYSSV-HNIIADKAAILPAAISFEQAAASFLKGLTVYY 130
Query: 142 GLERS-AFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLA 200
            L ++      +  L    AGGVG +  Q AK +                 L++ GA   
Sbjct: 131 LLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA-GAWQV 189
Query: 201 IDYTKEN-IEDLPE-----KFDVVFDAVGQ--CDKALKAVKEGGRVVS 240
           I+Y +E+ +E L E     K  VV+D+VG+   +++L  ++  G +VS
Sbjct: 190 INYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVS 237

>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus Stearothermophilus Length = 328

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 27  LREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL----PTIPGYDVAGVVEKVGSQVKKF 82
           L E  VL++V  +++N  D     G  S  D  +    P +PG D+AGVV  V SQ  +F
Sbjct: 28  LPEGDVLVRVHYSSVNYKD-----GLASIPDGKIVKTXPFVPGIDLAGVV--VSSQHPRF 80
Query: 83  KVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETA--- 139
           + GDEV     E  + H    G  +EY  +    L   PK L+  EA ++  A  TA   
Sbjct: 81  REGDEVIATGYEIGVTH---FGGYSEYARLHGEWLVPLPKGLTLKEAXAIGTAGFTAALS 137
Query: 140 YEGLERSAFSAGKS-ILVLGGAGGVGTMVIQ-LAKHVFGXXXXXXXXXXXXLDLLRSLGA 197
              LE    +  +  +LV G  GGVG++ +  LAK   G             D LR LGA
Sbjct: 138 IHRLEEHGLTPERGPVLVTGATGGVGSLAVSXLAKR--GYTVEASTGKAAEHDYLRVLGA 195
Query: 198 DLAI---DYTKENIEDL-PEKFDVVFDAVG 223
              +   D   E I  L  +++    D VG
Sbjct: 196 KEVLAREDVXAERIRPLDKQRWAAAVDPVG 225

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 109/252 (43%), Gaps = 32/252 (12%)
Query: 15  VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEK 74
           V+K+E +  VPS+ E+++LIK     +N I+     G +       P + G + +G V  
Sbjct: 22  VIKYE-DYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK---PYVLGREASGTVVA 77
Query: 75  VGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK-PK-----NLSFVE 128
            G  V  F+VGD+V              N + A+Y+ +      +K PK      L    
Sbjct: 78  KGKGVTNFEVGDQV----------AYISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYA 127
Query: 129 AASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXX 188
           A  L + T  ++   E      G  +L+   AGGVG ++ QL K + G            
Sbjct: 128 AGLLQVLTALSFTN-EAYHVKKGDYVLLFAAAGGVGLILNQLLK-MKGAHTIAVASTDEK 185
Query: 189 LDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVGQ--CDKALKAVKEGGRVVS 240
           L + +  GA+  I+ +KE+I     KF      D  FD+VG+   + +L A+K  G  VS
Sbjct: 186 LKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVS 245
Query: 241 I--IGSVTPPAS 250
                 + PP S
Sbjct: 246 FGNASGLIPPFS 257

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 24  VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD------SPLPTIPGYDVAGVVEKVGS 77
           VP  +  QVLIKV AA +   D     G F            LP   G+++AG +E+VG 
Sbjct: 20  VPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGD 79
Query: 78  QVKKFKVGDEV------------YGDINEKAL-DHPKR-----NGSLAEYTAVEENLLAL 119
           +V  +  GD V            Y  I E+ L D P+      +G+ AEY  V       
Sbjct: 80  EVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYXY 139
Query: 120 KPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXX 179
           K + L+ VEAA L  +  T Y  + +++    K++LV+G  GG+GT  +Q+AK V G   
Sbjct: 140 KLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIAKAVSGATI 199
Query: 180 XXXXXXXXXLDLLRSLGADLAIDYTKEN 207
                    ++  +  GAD  I+ + ++
Sbjct: 200 IGVDVREEAVEAAKRAGADYVINASMQD 227

>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 111/270 (41%), Gaps = 32/270 (11%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           ++A VY  +G+   V++ + N+E+ ++R   V +K++AA +NP D   + G +      L
Sbjct: 27  VRALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPE-L 84
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEY---TAVEENLL 117
           P + G +    V  VGS V   K GD V              N  L  +       E  L
Sbjct: 85  PAVGGNEGVAQVVAVGSNVTGLKPGDWVI-----------PANAGLGTWRTEAVFSEEAL 133
Query: 118 ALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
              P ++    AA+L +   TAY  L +      G S++      GVG  VIQ+A    G
Sbjct: 134 IQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAA-ALG 192
Query: 177 XXXXXXXXXXXXL----DLLRSLGADLAID-------YTKENIEDLPEKFDVVFDAVG-- 223
                       +    D L+SLGA+  I          K   +D+P+   +  + VG  
Sbjct: 193 LRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQP-RLALNCVGGK 251
Query: 224 QCDKALKAVKEGGRVVSIIGSVTPPASSFV 253
              + L+ +  GG +V+  G    P  + V
Sbjct: 252 SSTELLRQLARGGTMVTYGGMAKQPVVASV 281

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 109/276 (39%), Gaps = 39/276 (14%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA  Y E G+   V+   T    P+    ++L+KV AA L   D   M    +     L
Sbjct: 1   MKAVQYTEIGSEPVVVDIPT----PTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGL 56
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV--YGDINEKALDHPKRN--------------- 103
           P   G++  G V ++G  V  F VGD V  YG     A     R                
Sbjct: 57  PLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITP 116
Query: 104 ------GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER--SAFSAGKSIL 155
                 GS+AEY  V+     +   +L  V AA L  A  T Y  + R       G + +
Sbjct: 117 PGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAV 176
Query: 156 VLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDY---TKENIEDLP 212
           V+G  GG+G + IQ+ + V              L L R +GAD A+       + I +L 
Sbjct: 177 VIG-VGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELT 235
Query: 213 --EKFDVVFDAVG---QCDKALKAVKEGGRVVSIIG 243
             +    VFD VG     D A + V   G  +S++G
Sbjct: 236 GGQGATAVFDFVGAQSTIDTAQQVVAVDGH-ISVVG 270

>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 109/265 (41%), Gaps = 32/265 (12%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           ++A VY  +G+   V++ + N+E+ ++R   V +K++AA +NP D   + G +      L
Sbjct: 14  VRALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPE-L 71
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEY---TAVEENLL 117
           P + G +    V  VGS V   K GD V              N  L  +       E  L
Sbjct: 72  PAVGGNEGVAQVVAVGSNVTGLKPGDWVI-----------PANAGLGTWRTEAVFSEEAL 120
Query: 118 ALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
              P ++    AA+L +   TAY  L +      G S++      GVG  VIQ+A    G
Sbjct: 121 IQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAA-ALG 179
Query: 177 XXXXXXXXXXXXL----DLLRSLGADLAID-------YTKENIEDLPEKFDVVFDAVG-- 223
                       +    D L+SLGA+  I          K   +D+P+   +  + VG  
Sbjct: 180 LRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQP-RLALNCVGGK 238
Query: 224 QCDKALKAVKEGGRVVSIIGSVTPP 248
              + L+ +  GG +V+  G    P
Sbjct: 239 SSTELLRQLARGGTMVTYGGMAKQP 263

>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 38/247 (15%)
Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLP 61
           KAWV K  G    +     ++  P   E +V+++V A  LN  D    LGA+     P P
Sbjct: 2   KAWVLKRLGGPLEL----VDLPEPEAEEGEVVLRVEAVGLNFADHLXRLGAYLTRLHP-P 56
Query: 62  TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKP 121
            IP                   V    Y  +  +        G LAE  AV +  L   P
Sbjct: 57  FIP------------GXEVVGVVEGRRYAALVPQ--------GGLAERVAVPKGALLPLP 96
Query: 122 KNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXX 181
           + LS  EAA+ P++  TAY  L+R+    G+ +LV   AG +GT  +Q+A+   G     
Sbjct: 97  EGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVAR-AXGLRVLA 155
Query: 182 XXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK------FDVVFDAVG-QCDKALKAVKE 234
                  L L  +LGA+ A  Y      ++PE+       D+V +  G + +++L  +  
Sbjct: 156 AASRPEKLALPLALGAEEAATYA-----EVPERAKAWGGLDLVLEVRGKEVEESLGLLAH 210
Query: 235 GGRVVSI 241
           GGR+V I
Sbjct: 211 GGRLVYI 217

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 101/238 (42%), Gaps = 30/238 (12%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M A ++K+ G    V +    V+V S    QV ++  A  +N +D     G       PL
Sbjct: 3   MAAVIHKKGGPDNFVWE---EVKVGSPGPGQVRLRNTAIGVNFLDTYHRAG----IPHPL 55
Query: 61  -----PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEEN 115
                P + G++ A VVE+VG  V  F VG+ V   +       P       E     E 
Sbjct: 56  VVGEPPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCL-------PPLGAYSQERLYPAEK 108
Query: 116 LLALKPKNLSF--VEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAK 172
           L+ + PK+L    V  A L L   TA   L ++     G  +L+   AGG+G +++  A+
Sbjct: 109 LIKV-PKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWAR 167
Query: 173 HVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVGQ 224
           H  G             +  R LG    I+Y+ ++  ++  +       DVV+D++G+
Sbjct: 168 H-LGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK 224

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 26/178 (14%)
Query: 21  NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
           +V +P  + ++VLI++  A +   D +   G  +     LP I G++ AG + +VG ++ 
Sbjct: 20  DVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVG-ELA 78
Query: 81  KFKVGDEV-----YGDINEKALDHPK-------------RNGSLAEYTAVEENLLALKPK 122
           K K GD V     +GD+  +     K              NG  +EY  V+ +   +K  
Sbjct: 79  KVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKLN 138
Query: 123 NLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAGGVGTMVIQLAKHVF 175
           +LS VEAA L  A  T+   + +     S F+  + ++++ G GG+    IQ+ K + 
Sbjct: 139 SLSPVEAAPLADAGTTSMGAIRQALPFISKFA--EPVVIVNGIGGLAVYTIQILKALM 194

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 31/225 (13%)
Query: 16  LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM----LGAFSATDSPLPTIPGYDVAGV 71
           L+ E N  +P    ++VL+++ +  +   D        +G F       P + G++ +G 
Sbjct: 19  LRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKK---PMVLGHEASGT 74
Query: 72  VEKVGSQVKKFKVGDEV------------YGDINEKALD-------HPKRNGSLAEYTAV 112
           VEKVGS VK  K GD V            +  +    L         P  +G+L  +   
Sbjct: 75  VEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKH 134
Query: 113 EENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLA 171
                   P N++F E A + PL+         R   + G  +LV G AG +G + + +A
Sbjct: 135 NAAFCYKLPDNVTFEEGALIEPLSV--GIHACRRGGVTLGHKVLVCG-AGPIGMVTLLVA 191
Query: 172 KHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFD 216
           K +              L   + +GADL +  +KE+ +++  K +
Sbjct: 192 KAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE 236

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 99/243 (40%), Gaps = 43/243 (17%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKR----MLGAFSAT 56
           + A +YK     Q+ L+ E    +P  +ED+VL+++    +   D        +  F   
Sbjct: 6   LSAVLYK-----QNDLRLEQR-PIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVK 59
Query: 57  DSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV---------------------YGDINEK 95
           D   P + G++ +G V KVG  VK  K GD V                       D+   
Sbjct: 60  D---PMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC 116
Query: 96  ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSI 154
           A   P  +G+LA Y     +     P N+S  E A L PL+         R+    G ++
Sbjct: 117 AT--PPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLS--VGVHACRRAGVQLGTTV 172
Query: 155 LVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGAD--LAIDYTKENIEDLP 212
           LV+ GAG +G +V  LA   +G            L++ ++ GAD  L +D  KE    + 
Sbjct: 173 LVI-GAGPIG-LVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSII 230
Query: 213 EKF 215
           E+ 
Sbjct: 231 ERI 233

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV---------------YGDINEKA----LDHPK 101
           P + G++ +G VEKVGS VK  K GD V                G  N          P 
Sbjct: 64  PXVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPP 123
Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGA 160
            +G+L  +           P N++F E A + PL+         R   + G  +LV G A
Sbjct: 124 DDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSV--GIHACRRGGVTLGHKVLVCG-A 180
Query: 161 GGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFD 216
           G +G + + +AK                L   + +GADL +  +KE+ +++  K +
Sbjct: 181 GPIGXVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE 236

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 31/168 (18%)
Query: 32  VLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV--- 88
           VLI ++ A +   D       +   +   P IPG+++AG++++VG  VKKFK+GD V   
Sbjct: 32  VLIDILYAGICHSDIHSAYSEWK--EGIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVG 89
Query: 89  -------------------------YGDINEKALDHPKRNGSLAEYTAVEENLLALKPKN 123
                                      D  +   D+    G  +    V+EN +    KN
Sbjct: 90  CFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKN 149
Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLA 171
               + A L  A  T Y  L+ S  + G  + V  G GG+G+M ++ A
Sbjct: 150 APLEKVAPLLCAGITTYSPLKFSKVTKGTKVGV-AGFGGLGSMAVKYA 196

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 29/172 (16%)
Query: 24  VPSLREDQVLIKVVAAALNPIDFKRM-LGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
           VP     ++L++V AA++   D       A++      P + G++ +GVVE VG  V++ 
Sbjct: 20  VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRP 79
Query: 83  KVGDEV-------------------YGDINEKALDHPKRNGSLAEYTAVEENLLALKPKN 123
           +VGD V                   +  +N + L    R+G  AEY  V      + PK+
Sbjct: 80  QVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKD 138
Query: 124 LSFVEAASL-PL--ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAK 172
           L F  AA L P   A  T Y G    +  +GKS+L+  GAG +G M   + +
Sbjct: 139 LPFEVAAILEPFGNAVHTVYAG----SGVSGKSVLIT-GAGPIGLMAAMVVR 185

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 31/225 (13%)
Query: 16  LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM----LGAFSATDSPLPTIPGYDVAGV 71
           L+ E N  +P    ++VL+K+ +  +   D        +G F       P + G++ +G 
Sbjct: 18  LRLE-NYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKK---PMVLGHEASGT 73
Query: 72  VEKVGSQVKKFKVGDEV------------YGDINEKALD-------HPKRNGSLAEYTAV 112
           V KVGS V+  + GD V            +  I    L         P  +G+L  +   
Sbjct: 74  VVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGNLCRFYKH 133
Query: 113 EENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLA 171
             N     P N++F E A + PL+         R+  + G  +LV  GAG +G + +  A
Sbjct: 134 NANFCYKLPDNVTFEEGALIEPLS--VGIHACRRAGVTLGNKVLVC-GAGPIGLVNLLAA 190
Query: 172 KHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFD 216
           K +              L   + +GAD  ++ + E+ E++ +K +
Sbjct: 191 KAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVE 235

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 40/262 (15%)
Query: 2   KAWVYKEYGN---SQSVLKFETNVEVPSLREDQVLIKVVAAALNP---IDFKRML-GAFS 54
           K+W  K++     +QS  + +T VE+P L+  +VL++ +  +++P   I  KR+  GA  
Sbjct: 9   KSWTLKKHFQGKPTQSDFELKT-VELPPLKNGEVLLEALFLSVDPYMRIASKRLKEGA-- 65
Query: 55  ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEE 114
                   + G  VA VVE   S+   F  G  V          H   +G   E      
Sbjct: 66  -------VMMGQQVARVVE---SKNSAFPAGSIVLA--QSGWTTHFISDGKGLE------ 107
Query: 115 NLLALKPKNLSFVEA-ASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAK 172
            LL   P  L    A  ++ +   TAY GL E      G+++LV   AG VG++V Q+AK
Sbjct: 108 KLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAK 167
Query: 173 HVFGXXXXXXXXXXXXLDLLRSLGADLAIDY-TKENIEDL-----PEKFDVVFDAVGQ-- 224
            + G            +  L+ +G D A +Y T  ++E+      P+ +D  FD VG   
Sbjct: 168 -LKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEF 226
Query: 225 CDKALKAVKEGGRVVSIIGSVT 246
            +  L  +K+ G+ ++I G+++
Sbjct: 227 LNTVLSQMKDFGK-IAICGAIS 247

>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp Length = 330

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 61/137 (44%), Gaps = 10/137 (7%)
Query: 11  NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD--SPLPTIPGYDV 68
           N+  V      +    L +D VLIKV   A + I++K  L   +  +     P I G D 
Sbjct: 13  NADDVSVHVKTISTEDLPKDGVLIKV---AYSGINYKDGLAGKAGGNIVREYPLILGIDA 69
Query: 69  AGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVE 128
           AG V  V S   +F  GDEV     E  +    R+G L+EY +V  + L   P+NLS  E
Sbjct: 70  AGTV--VSSNDPRFAEGDEVIATSYELGV---SRDGGLSEYASVPGDWLVPLPQNLSLKE 124
Query: 129 AASLPLATETAYEGLER 145
           A     A  TA   + R
Sbjct: 125 AXVYGTAGFTAALSVHR 141

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 28/248 (11%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFK-RMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
           V+VP     +VLIKV+A ++   D        ++ +    P I G++VAG V ++G  V+
Sbjct: 21  VDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVE 80
Query: 81  KFKVGDEVYGDIN---------EKALDHPKRN---------GSLAEYTAVEENLLALKPK 122
             +VGD V  + +          +   H  +N         G  AEY  V    +   PK
Sbjct: 81  GIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPK 140
Query: 123 NLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXX 182
           ++   E A+L      A + +     S GKS+L+  GAG +G + I +AK          
Sbjct: 141 SIP-PEYATLQEPLGNAVDTVLAGPIS-GKSVLIT-GAGPLGLLGIAVAKASGAYPVIVS 197
Query: 183 XXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVV----FDAVGQCDKALKAVKEGGRV 238
                  +L + +GAD  I+  +E++  + E  D+      D   +   A KA+++G + 
Sbjct: 198 EPSDFRRELAKKVGADYVINPFEEDV--VKEVXDITDGNGVDVFLEFSGAPKALEQGLQA 255
Query: 239 VSIIGSVT 246
           V+  G V+
Sbjct: 256 VTPAGRVS 263

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 28/248 (11%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFK-RMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
           V+VP     +VLIKV+A ++   D        ++ +    P I G++VAG V ++G  V+
Sbjct: 22  VDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVE 81
Query: 81  KFKVGDEVYGDIN---------EKALDHPKRN---------GSLAEYTAVEENLLALKPK 122
             +VGD V  + +          +   H  +N         G  AEY  V    +   PK
Sbjct: 82  GIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPK 141
Query: 123 NLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXX 182
           ++   E A+L      A + +     S GKS+L+  GAG +G + I +AK          
Sbjct: 142 SIP-PEYATLQEPLGNAVDTVLAGPIS-GKSVLIT-GAGPLGLLGIAVAKASGAYPVIVS 198
Query: 183 XXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVV----FDAVGQCDKALKAVKEGGRV 238
                  +L + +GAD  I+  +E++  + E  D+      D   +   A KA+++G + 
Sbjct: 199 EPSDFRRELAKKVGADYVINPFEEDV--VKEVXDITDGNGVDVFLEFSGAPKALEQGLQA 256
Query: 239 VSIIGSVT 246
           V+  G V+
Sbjct: 257 VTPAGRVS 264

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 87/211 (41%), Gaps = 33/211 (15%)
Query: 63  IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSLA------- 107
           I G++  G V +VGS+VK FK GD V        +  +  +A      NG LA       
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNF 115
Query: 108 ------EYTAVEEN--LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
                 EY  V +    LA+ PK++    A  +     T + G E +    G S++V+ G
Sbjct: 116 KDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVI-G 174
Query: 160 AGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKF---- 215
            G VG M I  AK                ++  +  GA   ++Y   +IED   K     
Sbjct: 175 IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGK 234
Query: 216 --DVVFDAVGQCD---KALKAVKEGGRVVSI 241
             D V  A G  +   +A+K VK GG + +I
Sbjct: 235 GVDRVIMAGGGSETLSQAVKMVKPGGIISNI 265

>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From Mycobacterium Abscessus Solved By Iodide Ion Sad Length = 342

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 20  TNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKV--GS 77
           T+VE P    + V++ V AA +   D+    G +     P P +PG + AGVV     GS
Sbjct: 39  TDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEP-PFVPGIETAGVVRSAPEGS 97
Query: 78  QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATE 137
            +K    GD V       A +     G  AE  AV  + +   P  L   EA +L     
Sbjct: 98  GIKP---GDRVM------AFNF---IGGYAERVAVAPSNILPTPPQLDDAEAVALIANYH 145
Query: 138 TAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLG 196
           T Y     R    AG+++LVLG AGG+GT  IQ+AK + G             + ++S+G
Sbjct: 146 TMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSVG 204
Query: 197 ADLAIDYTKENIEDLPEK-----FDVVFDAVG--QCDKALKAVKEGGRVVSI 241
           AD+ +   +   + + E       D+V D +G    D A++ +   GR++ +
Sbjct: 205 ADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVV 256

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 102/277 (36%), Gaps = 53/277 (19%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
           VEV   +  +V IK+VAA +   D   + G   A   PLP I G++ AG+VE +G  V  
Sbjct: 26  VEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVA---PLPVIAGHEAAGIVESIGEGVTT 82
Query: 82  FKVGDEVY-----------------GDINEKALDHPK---RNG----------------- 104
            + GD+V                  G++  K L  P+   ++G                 
Sbjct: 83  VRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGT 142
Query: 105 -SLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGV 163
            + ++YT V+E  +A         +   +     T Y    + A     S   + G GGV
Sbjct: 143 STFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGV 202
Query: 164 GTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK----FD 216
           G  VI   K                    + +GA   +   DY K   E L E      D
Sbjct: 203 GLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVD 262
Query: 217 VVFDAVGQCDK---ALKAVKEGGRVVSIIGSVTPPAS 250
             F+ +G+ D    AL   +E   V  I+G   PP S
Sbjct: 263 FSFEVIGRLDTMVAALSCCQEAYGVSVIVG--VPPDS 297

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 102/277 (36%), Gaps = 53/277 (19%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
           VEV   +  +V IK+VAA +   D   + G   A   PLP I G++ AG+VE +G  V  
Sbjct: 26  VEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVA---PLPVIAGHEAAGIVESIGEGVTT 82
Query: 82  FKVGDEVY-----------------GDINEKALDHPK---RNG----------------- 104
            + GD+V                  G++  K L  P+   ++G                 
Sbjct: 83  VRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGT 142
Query: 105 -SLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGV 163
            + ++YT V+E  +A         +   +     T Y    + A     S   + G GGV
Sbjct: 143 STFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGV 202
Query: 164 GTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK----FD 216
           G  VI   K                    + +GA   +   DY K   E L E      D
Sbjct: 203 GLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVD 262
Query: 217 VVFDAVGQCDK---ALKAVKEGGRVVSIIGSVTPPAS 250
             F+ +G+ D    AL   +E   V  I+G   PP S
Sbjct: 263 FSFEVIGRLDTMVAALSCCQEAYGVSVIVG--VPPDS 297

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 36/199 (18%)
Query: 24  VPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
           +P ++ +D+V +K+ ++ L   D  R+   F       P   G++ +G ++ VGS V   
Sbjct: 19  IPEIKHQDEVRVKIASSGLCGSDLPRI---FKNGAHYYPITLGHEFSGYIDAVGSGVDDL 75
Query: 83  KVGDEV------------------YGDINEKALDHPKRNGSLAEYTAVE-ENLLALKPKN 123
             GD V                  Y    +      +R+G  AEY  V+ +N+ AL P +
Sbjct: 76  HPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFAL-PTD 134
Query: 124 L-----SFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXX 178
           +     +F+E  ++ L      +G E       K+++++ GAG +G + IQ A  +    
Sbjct: 135 MPIEDGAFIEPITVGLHAFHLAQGCEN------KNVIII-GAGTIGLLAIQCAVALGAKS 187
Query: 179 XXXXXXXXXXLDLLRSLGA 197
                     L L +S GA
Sbjct: 188 VTAIDISSEKLALAKSFGA 206

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 97/278 (34%), Gaps = 54/278 (19%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
           VEV   +  +V IK+VAA +   D   + G      +PLP I G++ AG+VE VG  V  
Sbjct: 26  VEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLV---TPLPVILGHEAAGIVESVGEGVTT 82
Query: 82  FKVGDEVY------------------------------GDINE---------KALDHPKR 102
            K GD+V                               G + +         K + H   
Sbjct: 83  VKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKPIHHFVG 142
Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGG 162
             + ++YT V+EN +A         +   +     T Y    + A     S   + G GG
Sbjct: 143 VSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGG 202
Query: 163 VGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK----F 215
           VG  V+   K                    + LGA   I   DY K   E L E      
Sbjct: 203 VGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGV 262
Query: 216 DVVFDAVGQCDK---ALKAVKEGGRVVSIIGSVTPPAS 250
           D  F+ +GQ D    +L    E      I+G   PP S
Sbjct: 263 DFSFEVIGQLDTMMASLLCCHEACGTSVIVG--VPPDS 298

>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeba Histolytica Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 63  IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSL-------- 106
           I G++  G + KVGS VK+ KVGD+V        +G+  E    +P  +G +        
Sbjct: 56  ILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGE-EESQRGYPMHSGGMLGGWKFSN 114
Query: 107 ------AEYTAVEE--NLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG 158
                 +E   V E    LAL P+++   +A  L     T + G E +    G ++ V+ 
Sbjct: 115 FKDGVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVI- 173
Query: 159 GAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENI 208
           G G VG M +  A H+               D+    GA   I+Y   +I
Sbjct: 174 GIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDI 223

>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In Complex With Cacodylate Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 63  IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSL-------- 106
           I G++  G + KVGS VK+ KVGD+V        +G+  E    +P  +G +        
Sbjct: 56  ILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGE-EESQRGYPMHSGGMLGGWKFSN 114
Query: 107 ------AEYTAVEE--NLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG 158
                 +E   V E    LAL P+++   +A  L     T + G E +    G ++ V+ 
Sbjct: 115 FKDGVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVI- 173
Query: 159 GAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENI 208
           G G VG M +  A H+               D+    GA   I+Y   +I
Sbjct: 174 GIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDI 223

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 84/211 (39%), Gaps = 33/211 (15%)
Query: 63  IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSLA------- 107
           I G++  G V +VGS+VK FK GD V        +  +  +A      NG LA       
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNF 115
Query: 108 ------EYTAVEEN--LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
                 EY  V +    LA+ PK++    A  +     T + G E +    G ++ VL G
Sbjct: 116 KDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIELGATVAVL-G 174
Query: 160 AGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIE----DLPE-- 213
            G VG M +  AK                +D  +  GA   ++Y    IE    +L E  
Sbjct: 175 IGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDGPIESQIMNLTEGK 234
Query: 214 KFDVVFDAVGQCD---KALKAVKEGGRVVSI 241
             D    A G  D    A+K VK GG + ++
Sbjct: 235 GVDAAIIAGGNADIMATAVKIVKPGGTIANV 265

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 106/258 (41%), Gaps = 48/258 (18%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFK-RMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
           V+VP     +VLIKV+A ++   D        ++ +    P I G++VAG V +VG  V+
Sbjct: 22  VDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVE 81
Query: 81  KFKVGDEVYGDIN-----EKALDHPKRN-------------GSLAEYTAVEENLLALKPK 122
             +VGD +  + +       A  H + +             G  A Y  V        PK
Sbjct: 82  DLQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGVDMDGVFAHYAIVPAKNAWKNPK 141
Query: 123 NLSFVEAASL--PL--ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXX 178
           ++   E A+L  PL  A +T   G       AG+S L+  GAG +G + I +AK      
Sbjct: 142 DMP-PEYAALQEPLGNAVDTVLAGP-----IAGRSTLIT-GAGPLGLLGIAVAK----AS 190
Query: 179 XXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDV-VFDAVG------------QC 225
                      +  R L   +  DY     E+ P KF + + D  G              
Sbjct: 191 GAYPVIVSEPSEFRRKLAKKVGADYVVNPFEEDPVKFVMDITDGAGVEVFLEFSGAPKAL 250
Query: 226 DKALKAVKEGGRVVSIIG 243
           ++ LKAV  GGR VS++G
Sbjct: 251 EQGLKAVTPGGR-VSLLG 267

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 1  MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           KA V  E G   S+      +EV   +  +V IK++A A+   D   + GA    +   
Sbjct: 8  CKAAVAWEAGKPLSI----EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCF 61
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEV 88
          P I G++ AG+VE VG  V K K GD V
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTV 89

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 1  MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           KA V  E G   S+      +EV   +  +V IK++A A+   D   + GA    +   
Sbjct: 8  CKAAVAWEAGKPLSI----EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCF 61
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEV 88
          P I G++ AG+VE VG  V K K GD V
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTV 89

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 1  MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           KA V  E G   S+      +EV   +  +V IK++A A+   D   + GA    +   
Sbjct: 7  CKAAVAWEAGKPLSI----EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCF 60
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEV 88
          P I G++ AG+VE VG  V K K GD V
Sbjct: 61 PVILGHEGAGIVESVGEGVTKLKAGDTV 88

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 24/133 (18%)
Query: 63  IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSLA------- 107
           I G++  G V +VGS+VK FK GD V        +  +  +A      NG LA       
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNF 115
Query: 108 ------EYTAVEEN--LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
                 EY  V +    LA+ PK++    A  +     T + G E +    G S++V+ G
Sbjct: 116 KDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVI-G 174
Query: 160 AGGVGTMVIQLAK 172
            G VG M I  AK
Sbjct: 175 IGAVGLMGIAGAK 187

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 138 TAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLG 196
           TAY GL E      G++++V   AG VG++V Q+AK + G            +  L+ LG
Sbjct: 148 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAK-LKGCKVVGAVGSDEKVAYLQKLG 206
Query: 197 ADLAIDY-TKENIEDL-----PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT 246
            D+  +Y T E++E+      P+ +D  FD VG    +  +  +K+ GR ++I G+++
Sbjct: 207 FDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGR-IAICGAIS 263

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 138 TAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLG 196
           TAY GL E      G++++V   AG VG++V Q+AK + G            +  L+ LG
Sbjct: 127 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAK-LKGCKVVGAVGSDEKVAYLQKLG 185
Query: 197 ADLAIDY-TKENIEDL-----PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT 246
            D+  +Y T E++E+      P+ +D  FD VG    +  +  +K+ GR ++I G+++
Sbjct: 186 FDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGR-IAICGAIS 242

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	284
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	1e-111
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-100
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	9e-98
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	2e-96
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	5e-96
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	8e-95
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	7e-80
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	6e-73
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	2e-67
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	2e-66
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	2e-65
3gms_A	340	Putative NADPH:quinone reductase; structural genom	7e-64
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	3e-63
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	6e-63
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	1e-62
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	3e-61
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	1e-59
4eye_A	342	Probable oxidoreductase; structural genomics, niai	2e-58
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	1e-57
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	2e-55
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-53
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	5e-52
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	4e-51
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	4e-49
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	1e-48
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	3e-48
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	3e-47
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	1e-44
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	1e-41
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	6e-41
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	4e-39
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	9e-39
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	1e-38
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	7e-38
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	2e-35
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	3e-34
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	1e-33
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	6e-33
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	1e-32
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	2e-32
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	8e-32
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-31
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	2e-29
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	4e-28
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	3e-27
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	1e-26
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	1e-24
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	8e-22
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	8e-21
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	1e-20
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	3e-20
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	1e-19
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	3e-18
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	1e-16
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	1e-16
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	1e-16
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	2e-16
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	2e-16
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	6e-16
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	6e-15
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	1e-14
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	1e-14
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	2e-14
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	3e-14
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	4e-14
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	2e-13
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	3e-13
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	1e-12
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	2e-07
3mgg_A	276	Methyltransferase; NYSGXRC, PSI-II, protein struct	5e-05
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	6e-05
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	7e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-05
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	9e-05
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	3e-04

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  322 bits (829), Expect = e-111
 Identities = 93/295 (31%), Positives = 138/295 (46%), Gaps = 26/295 (8%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF---SATD 57
           MKA  + ++G    VLK       P  R++Q+LIKV AA+LNPID+K   G+        
Sbjct: 7   MKAIQFDQFGPP-KVLKLVD-TPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLK 64

Query: 58  SPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL 117
           + LP+  GYD +G V ++GS V    +GD+V G         P      AEY     + +
Sbjct: 65  NNLPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIA-----GFPDHPCCYAEYVCASPDTI 119

Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA 177
             K + LSF++AASLP A  TA + L ++    G  +L+  GAGGVG + IQLAK   G 
Sbjct: 120 IQKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQ-KGT 178

Query: 178 SKVAATSSTAKLDLLRSLGADLAIDYTKENIED-LPEKFDVVFDAVGQ--CDKALKAVKE 234
             V  T+S      L++LGA+  I+Y +E+    +    D V D VG     +++  +KE
Sbjct: 179 -TVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQSIDCLKE 237

Query: 235 GGRVVSIIGSVTPP-----------ASSFVLTSDGSILEKLNPYFESGKVKAIID 278
            G +VS+                  A   +   +   L  L       K++  I 
Sbjct: 238 TGCIVSVPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIEIS 292

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  296 bits (759), Expect = e-100
 Identities = 66/302 (21%), Positives = 118/302 (39%), Gaps = 40/302 (13%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+      Y      +    +V++P+L  D +L++  A  +NP+D+K +       +   
Sbjct: 2   MEQHQVWAYQTKTHSVTLN-SVDIPALAADDILVQNQAIGINPVDWKFIKANP--INWSN 58

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
             +PG D AGV+ KVG++V    +G  V    +       KR+GS AE+T +  + +   
Sbjct: 59  GHVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTS------LKRHGSFAEFTVLNTDRVMTL 112

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           P NLSF  AA+LP    TA++  E+   +  + +L+  G G V  ++ Q+  +  G   V
Sbjct: 113 PDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLI-VGFGAVNNLLTQMLNN-AGY-VV 169

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC--DKALKAVKEGGRV 238
              S++    L    G              + +K+  +FDAV        + ++K  G +
Sbjct: 170 DLVSASLSQALAAKRGVRHLYREP----SQVTQKYFAIFDAVNSQNAAALVPSLKANGHI 225

Query: 239 VSIIGSVTPPASSFVLTS----------------------DGSILEKLNPYFESGKVKAI 276
           + I   +  P       +                           E L      GK++  
Sbjct: 226 ICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIA 285

Query: 277 ID 278
             
Sbjct: 286 AP 287

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  289 bits (743), Expect = 9e-98
 Identities = 82/316 (25%), Positives = 139/316 (43%), Gaps = 48/316 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFE-TNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP 59
           +KA  +++         F+  N+++P  +  ++L+K+ + ++NP+D K+ L   S     
Sbjct: 3   LKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVS----K 58

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
            P + G+D  GVVE VG++V  F  GD VY   +      P +NGS AEY  + E L+A 
Sbjct: 59  APRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGS------PDQNGSNAEYQLINERLVAK 112

Query: 120 KPKNLSFVEAASLPLATETAYEGL-------ERSAFSAGKSILVLGGAGGVGTMVIQLAK 172
            PKN+S  +A SLPL   TAYE L            + GK++L++ GAGGVG++  Q+AK
Sbjct: 113 APKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAK 172

Query: 173 HVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----PEKFDVVFDAVG---QC 225
             +G   +   S    ++  + +GAD+ +++ +  +        E  D VF         
Sbjct: 173 A-YGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDMYY 231

Query: 226 DKALKAVKEGGRVVSIIGSVTPPASS------------FVLT----------SDGSILEK 263
           D  ++ VK  G + +I+        +            F+                 LE 
Sbjct: 232 DDMIQLVKPRGHIATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLED 291

Query: 264 LNPYFESGKVKAIIDP 279
           +    E    +     
Sbjct: 292 ITNKVEQNIYQPTTTK 307

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  287 bits (736), Expect = 2e-96
 Identities = 76/314 (24%), Positives = 130/314 (41%), Gaps = 43/314 (13%)

Query: 1   MKAWVYKEYGNSQSVLKF-ETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP 59
           MKA  Y +           +  +  P+     +L++V A ++NP+D+K         D  
Sbjct: 23  MKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTP--PDGT 80

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
              + GYD AG+V  VG  V  F+ GDEV+   +        R G+ AE+  V+E ++  
Sbjct: 81  DWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGS------IIRPGTNAEFHLVDERIVGR 134

Query: 120 KPKNLSFVEAASLPLATETAYEGL------ERSAFSAGKSILVLGGAGGVGTMVIQLAKH 173
           KPK L + EAA+LPL + TA+E         +    A  +IL++GGAGGVG++ +Q+A+ 
Sbjct: 135 KPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQ 194

Query: 174 VFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----PEKFDVVFDAVG---QCD 226
               + +A  S     + ++SLGA   ID++K    ++          VF          
Sbjct: 195 RTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKHAA 254

Query: 227 KALKAVKEGGRVVSIIGSVTPPASS-----------FVLT----------SDGSILEKLN 265
           +    +   GR   I                      + T            G +L  ++
Sbjct: 255 EIADLIAPQGRFCLIDDPSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVS 314

Query: 266 PYFESGKVKAIIDP 279
              + G+++  +  
Sbjct: 315 RLVDEGRLRTTLTN 328

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  286 bits (733), Expect = 5e-96
 Identities = 94/334 (28%), Positives = 149/334 (44%), Gaps = 65/334 (19%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSA---- 55
             AWV  +YG +  VL+F  N+ +P +   ++V++KV AA++NPID     G  +     
Sbjct: 22  SMAWVIDKYGKN-EVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNM 80

Query: 56  ---------TDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSL 106
                         P   G DV+GVV + G  VK FK GDEV+  +       P + G+L
Sbjct: 81  KRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP------PWKQGTL 134

Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-----FSAGKSILVLGGAG 161
           +E+  V  N ++ KPK+L+  +AASLP    TA+  + +          GK +L+LG +G
Sbjct: 135 SEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASG 194

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL---PEKFDVV 218
           GVGT  IQ+ K  + A  V A  S    +L+R LGAD  IDY   ++E+     + FD +
Sbjct: 195 GVGTFAIQVMKA-WDA-HVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFI 252

Query: 219 FDAVGQ--CDKALKAVKE--GGRVVSIIGSVTPP-------------------------- 248
            D VG      A   +K+  G   V+++                                
Sbjct: 253 LDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFW 312

Query: 249 ----ASSFVLTSDGSILEKLNPYFESGKVKAIID 278
                      + G  L+ +    ++GK++ +I+
Sbjct: 313 KGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIE 346

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  282 bits (723), Expect = 8e-95
 Identities = 98/307 (31%), Positives = 148/307 (48%), Gaps = 37/307 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M A V +E      VL+    +  P     QVL+++ A+  NP+D K   G       PL
Sbjct: 8   MIAAVVEEAN-GPFVLR---KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPL 63

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P I G D+AG V  VG +V  F+VGD V+G             G+ A++ AV+  LLA K
Sbjct: 64  PAILGMDLAGTVVAVGPEVDSFRVGDAVFGLTG----GVGGLQGTHAQFAAVDARLLASK 119

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P  L+  +A+ LPL   TA+EGL +R+    G+++L+ GG GGVG + IQ+A    GA +
Sbjct: 120 PAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALA-RGA-R 177

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKE----NIEDLPEKFDVVFDAVGQ--CDKALKAVK 233
           V AT+  + L+ +R LGA       +           + FD+V+D +G    D +  AVK
Sbjct: 178 VFATARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVK 237

Query: 234 EGGRVVSIIGSVTPPAS-----------SFVLTS---------DGSILEKLNPYFESGKV 273
             G VVS +G  T   +            F L +          G +L + +   ++GK+
Sbjct: 238 RFGHVVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKL 297

Query: 274 KAIIDPK 280
              +DP+
Sbjct: 298 APRLDPR 304

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  245 bits (626), Expect = 7e-80
 Identities = 77/339 (22%), Positives = 112/339 (33%), Gaps = 71/339 (20%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
             A    ++               P L  DQV ++V A A+NP D               
Sbjct: 12  QTALTVNDHDEVTVW----NAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFA-----TP 62

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
               G D AG V  VGS V   +VGD VYG  NE     P   G+ ++YT     + A  
Sbjct: 63  WAFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTP-DQGAFSQYTVTRGRVWAKI 121

Query: 121 PKNLSFVEAASLPLATETAYEGL-------------ERSAFSAGKSILVLGGAGGVGTMV 167
           PK LSF +AA+LP    TA   +             +    S    +LV GG+    T+ 
Sbjct: 122 PKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVT 181

Query: 168 IQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAV 222
           +Q+ +   G     AT S    DL +S GA+   DY   N+                D +
Sbjct: 182 MQMLRL-SGY-IPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCI 239

Query: 223 G------QCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGS----------------- 259
                   C  A+   + GG  VS+       A+  ++T+D +                 
Sbjct: 240 TNVESTTFCFAAIG--RAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYG 297

Query: 260 -------------ILEKLNPYFESGKVKAIID---PKGL 282
                        +        E G++          G 
Sbjct: 298 RPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGF 336

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  226 bits (578), Expect = 6e-73
 Identities = 95/320 (29%), Positives = 145/320 (45%), Gaps = 48/320 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A V +  G  + VL+    + VP     +V +++ AAALN +D     G  S    PL
Sbjct: 1   MRAVVMRARGGPE-VLEVAD-LPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKL-PL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPK------------------R 102
           P + G D +GVV+ VG  V+ F  GDEV  +         +                  R
Sbjct: 58  PHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHR 117

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAG 161
           +G+ AEY  + E  LA KPKNLSF EAA++PL   TA++ + ++     G  +LV+    
Sbjct: 118 HGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGS 177

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDL------PEK 214
           GV    IQ+AK  FGA +V AT+ +  KL   ++LGAD  ++YT  +           + 
Sbjct: 178 GVSVAAIQIAKL-FGA-RVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKG 235

Query: 215 FDVVFDAVGQC--DKALKAVKEGGRVVSIIGSVTPPASSFVLTS--------DGSIL--- 261
            D V D  G    +  +KA   GGR+  I G+ +    +              GS +   
Sbjct: 236 ADKVVDHTGALYFEGVIKATANGGRIA-IAGASSGYEGTLPFAHVFYRQLSILGSTMASK 294

Query: 262 ---EKLNPYFESGKVKAIID 278
                +  + E GK+K ++ 
Sbjct: 295 SRLFPILRFVEEGKLKPVVG 314

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  212 bits (542), Expect = 2e-67
 Identities = 81/308 (26%), Positives = 131/308 (42%), Gaps = 45/308 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A    E+G    VLK  +++ VP  ++ QVLIKV A  +NP++     G +S     L
Sbjct: 30  MRAVRVFEFGGP-EVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLL 87

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P  PG DVAGV+E VG     FK GD V+      +       G  AEY    ++ +   
Sbjct: 88  PYTPGSDVAGVIEAVGDNASAFKKGDRVFT-----SSTIS---GGYAEYALAADHTVYKL 139

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P+ L F + A++ +   TAY  L   +   AG+S+LV G +GGVG    Q+A+  +G  K
Sbjct: 140 PEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARA-YGL-K 197

Query: 180 VAAT-SSTAKLDLLRSLGADLAIDYTKENIEDLPEKF---------DVVFDAVGQ--CDK 227
           +  T  +     ++   GA    ++ +    +  +K          D++ + +      K
Sbjct: 198 ILGTAGTEEGQKIVLQNGAHEVFNHRE---VNYIDKIKKYVGEKGIDIIIEMLANVNLSK 254

Query: 228 ALKAVKEGGRVVSI-IGSVTPPASSFVLTSDGSIL----------------EKLNPYFES 270
            L  +  GGRV+ +             +  + SI+                  L    E 
Sbjct: 255 DLSLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEI 314

Query: 271 GKVKAIID 278
           G +K +I 
Sbjct: 315 GWLKPVIG 322

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  210 bits (537), Expect = 2e-66
 Identities = 86/316 (27%), Positives = 130/316 (41%), Gaps = 45/316 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+ W  +        LK      VP   E  ++++ +A +LN  D   +       D   
Sbjct: 28  MQEWSTETVAPH--DLKLAE-RPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGL-DLAF 83

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPK---------------RNGS 105
           P +P  D++GVVE VG  V +F+ GD V        LD  +                 G 
Sbjct: 84  PFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGV 143

Query: 106 LAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVG 164
           L+EY  + E      PK+L   EA++LP A  TA+  L E+    AG  ++V  G GGV 
Sbjct: 144 LSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQ-GTGGVA 202

Query: 165 TMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVV 218
              +Q+AK   GA  +  +SS  KLD   +LGAD  I+  +E+  +           D +
Sbjct: 203 LFGLQIAKA-TGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHI 261

Query: 219 FDAVGQ--CDKALKAVKEGGRVVSIIGSVTPPASSFVLTS--------DGSI------LE 262
            +  G     ++LKAV   GR+  +IG +     S  +           G        LE
Sbjct: 262 LEIAGGAGLGQSLKAVAPDGRIS-VIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALE 320

Query: 263 KLNPYFESGKVKAIID 278
            L    +   +K +ID
Sbjct: 321 DLVGAVDRLGLKPVID 336

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  210 bits (536), Expect = 2e-65
 Identities = 76/354 (21%), Positives = 128/354 (36%), Gaps = 79/354 (22%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS-- 58
           M A +     + +  +  +  V VP L   + L+ V+A+++N       +    +T    
Sbjct: 43  MFAGLETRDKDPRKSIHLDD-VPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFL 101

Query: 59  -------------PLP-TIPGYDVAGVVEKVGSQVKKFKVGDEVYG-------------- 90
                         LP  + G D+AGVV + G  V  ++ GDEV                
Sbjct: 102 ERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHN 161

Query: 91  ----DINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL--- 143
               D  ++        G LAE   V+ N L  KP +LS+ EAA+  L   TAY  L   
Sbjct: 162 DTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSR 221

Query: 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY 203
             +    G ++L+ G +GG+G+   Q A    GA+ +   SS  K ++ R++GA+  ID 
Sbjct: 222 NGAGMKQGDNVLIWGASGGLGSYATQFALA-GGANPICVVSSPQKAEICRAMGAEAIIDR 280

Query: 204 TKENIEDLP-----------------------EKFDVVFDAVGQC--DKALKAVKEGGRV 238
             E                             E  D+VF+  G+     ++   ++GG +
Sbjct: 281 NAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTI 340

Query: 239 VSIIGSVTPPASSFVLTS--------DGSI------LEKLNPYFESGKVKAIID 278
                S +     +             GS         + N     G++   + 
Sbjct: 341 T-TCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLS 393

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  202 bits (517), Expect = 7e-64
 Identities = 59/253 (23%), Positives = 107/253 (42%), Gaps = 27/253 (10%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            K   + ++GN + VL+ E    +  L++++V ++++   +NP D   + GA+ A   PL
Sbjct: 5   GKLIQFHKFGNPKDVLQVEY-KNIEPLKDNEVFVRMLVRPINPSDLIPITGAY-AHRIPL 62

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P IPGY+  G+VE VG+ V +  +G  V        L      G+  EY     + +   
Sbjct: 63  PNIPGYEGVGIVENVGAFVSRELIGKRVL------PLRGE---GTWQEYVKTSADFVVPI 113

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P ++    AA + +   TA+    E         +LV      +G +  QL++       
Sbjct: 114 PDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQI-LNFRL 172

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF---------DVVFDAVGQ--CDKA 228
           +A T +    + L  LGA   ID +      L E           D   D++G    ++ 
Sbjct: 173 IAVTRNNKHTEELLRLGAAYVIDTST---APLYETVMELTNGIGADAAIDSIGGPDGNEL 229

Query: 229 LKAVKEGGRVVSI 241
             +++  G  ++I
Sbjct: 230 AFSLRPNGHFLTI 242

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  202 bits (515), Expect = 3e-63
 Identities = 67/314 (21%), Positives = 116/314 (36%), Gaps = 47/314 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           ++A VY  +G+   V++ +  +E+ ++R   V +K++AA +NP D   + G +      L
Sbjct: 27  VRALVYGHHGDPAKVVELKN-LELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLL-PEL 84

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P + G +    V  VGS V   K GD V               G+        E  L   
Sbjct: 85  PAVGGNEGVAQVVAVGSNVTGLKPGDWVIPA--------NAGLGTWRTEAVFSEEALIQV 136

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P ++    AA+L +   TAY  L +      G S++      GVG  VIQ+A    G   
Sbjct: 137 PSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAA-LGLRT 195

Query: 180 VAATSSTAKL----DLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVG--QCDK 227
           +        +    D L+SLGA+  I   +    ++   F       +  + VG     +
Sbjct: 196 INVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTE 255

Query: 228 ALKAVKEGGRVVSI---IGSVTPPASSFVLTSDGSI--------------------LEKL 264
            L+ +  GG +V+           + S ++  D  +                    +  L
Sbjct: 256 LLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTL 315

Query: 265 NPYFESGKVKAIID 278
                 G++ A   
Sbjct: 316 CDLIRRGQLTAPAC 329

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  203 bits (519), Expect = 6e-63
 Identities = 83/364 (22%), Positives = 129/364 (35%), Gaps = 89/364 (24%)

Query: 1   MKAWVYKEYGNSQ----------SVLKFETNVEVPSLREDQVLIKVVAAALNPID----- 45
             A   +                  L+    V +P L  D+VL+ V+A+++N        
Sbjct: 25  YLALHLRAEDADMFKGVADKDVRKSLRLGE-VPMPELAPDEVLVAVMASSINYNTVWSAM 83

Query: 46  -----------FKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG---- 90
                           G ++        + G D +GVV + G  V+++K GD V      
Sbjct: 84  FEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAH 143

Query: 91  --------------DINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT 136
                            ++A       G LAEY  V  + L  KP +L++ EAA  PL  
Sbjct: 144 VDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCA 203

Query: 137 ETAYEGL---ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR 193
            TAY  L     +    G  +L+ G +GG+G+  IQ  K+  G   VA  SS  K   +R
Sbjct: 204 GTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKN-GGGIPVAVVSSAQKEAAVR 262

Query: 194 SLGADLAIDYTKENIED-----------------------LPEKFDVVFDAVGQ--CDKA 228
           +LG DL I+  +  I D                          + D+VF+  G+     +
Sbjct: 263 ALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLS 322

Query: 229 LKAVKEGGRVVSIIGSVTPPASSFVLTS--------------DGSILEKLNPYFESGKVK 274
           +   + GG VV   GS +    +F                  +    +  N  FESG V 
Sbjct: 323 VIVARRGGTVV-TCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVV 381

Query: 275 AIID 278
             + 
Sbjct: 382 PAMS 385

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  200 bits (510), Expect = 1e-62
 Identities = 79/311 (25%), Positives = 133/311 (42%), Gaps = 47/311 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+    K +G    V+       +P   E +VL++  A  +N  D  +  G++       
Sbjct: 29  MRFVDLKSFGGP-DVMVIGK-RPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP-PKDA 85

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
             I G +++G +  VG  V  + VGD+V G  N          G+ AEY  +    +   
Sbjct: 86  SPILGLELSGEIVGVGPGVSGYAVGDKVCGLAN---------GGAYAEYCLLPAGQILPF 136

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           PK    V+AA+LP    T +  L + +  + G+S+L+ GG  G+GT  IQLA+  FGA +
Sbjct: 137 PKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARA-FGA-E 194

Query: 180 VAAT-SSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAVGQ--CDKALKA 231
           V AT  ST K +    LGA   I+Y  E+   +      +  D++ D +G    ++ + +
Sbjct: 195 VYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAAYFERNIAS 254

Query: 232 VKEGGRVVSI--IGSVTPPASSFV------LTSDGSIL----------------EKLNPY 267
           + + G +  I  +G       +        LT  GS +                 ++ P 
Sbjct: 255 LAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPL 314

Query: 268 FESGKVKAIID 278
            E+G V  +I 
Sbjct: 315 LEAGTVAPVIH 325

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  196 bits (501), Expect = 3e-61
 Identities = 73/276 (26%), Positives = 115/276 (41%), Gaps = 24/276 (8%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A V   +G   + L+      +P  ++ ++ I+V A  LN ID     G         
Sbjct: 4   MRAVVLAGFGGL-NKLRLFR-KAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNP-PKT 60

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P +PG++ +G+VE +G  VK +++GD V   +N           + AE        +   
Sbjct: 61  PLVPGFECSGIVEALGDSVKGYEIGDRVMAFVN---------YNAWAEVVCTPVEFVYKI 111

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P ++SF EAA+ P+   TAY  L E +    G S+LV    GGVG  V QL         
Sbjct: 112 PDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCST-VPNVT 170

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTK---ENIEDL-PEKFDVVFDAVGQ--CDKALKAVK 233
           V  T+ST K + ++     L  D      + ++ +  E  D+V D +      K L  +K
Sbjct: 171 VFGTASTFKHEAIKDSVTHL-FDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLK 229

Query: 234 EGGRVVSI---IGSVTPPASSFVLTSDGSILEKLNP 266
             G  +             S F        +EK+NP
Sbjct: 230 PLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNP 265

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  192 bits (490), Expect = 1e-59
 Identities = 58/324 (17%), Positives = 100/324 (30%), Gaps = 58/324 (17%)

Query: 1   MKAWVYKEYG-----------NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM 49
           MKA +    G             +  L+    + VP+    QVLIKV  A++NP D   +
Sbjct: 11  MKALLLVGDGYTKTPSGSALEAMEPYLEQGR-IAVPAPGPSQVLIKVNLASINPSDVAFI 69

Query: 50  LGAFSATDSPLPTIPGYDVAGVVEKVGSQVK-KFKVGDEVYGDINEKALDHPKRNGSLAE 108
            G +           G++  G +   G +   K  VG  V        L +    GS AE
Sbjct: 70  KGQYGQP-RVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRV---AFATGLSNW---GSWAE 122

Query: 109 YTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVI 168
           Y   E          +   + A++ +   TA    +       K+ ++  GA  +  ++I
Sbjct: 123 YAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVKQEGEKAFVMTAGASQLCKLII 182

Query: 169 QLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF---------DVVF 219
            LAK   G   +       ++ LL+ +GA   ++       D               +  
Sbjct: 183 GLAKE-EGFRPIVTVRRDEQIALLKDIGAAHVLNEKA---PDFEATLREVMKAEQPRIFL 238

Query: 220 DAVG--QCDKALKAVKEGGRVVSI------IGSVTPPASSFV--LTSDGSIL-------- 261
           DAV          A+ +  R +           +  P          +G  L        
Sbjct: 239 DAVTGPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFK 298

Query: 262 -------EKLNPYFESGKVKAIID 278
                   +    F  G+    + 
Sbjct: 299 ERRGPAILEAQKRFSDGRWSTDVT 322

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  189 bits (482), Expect = 2e-58
 Identities = 70/253 (27%), Positives = 106/253 (41%), Gaps = 30/253 (11%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA   +        L +   VE P    + V++ V AA +   D+    G +       
Sbjct: 22  MKAIQAQSLSGP-EGLVYTD-VETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLK-MEP 78

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P +PG + AGVV     +    K GD V               G  AE  AV  + +   
Sbjct: 79  PFVPGIETAGVVRSAP-EGSGIKPGDRVMAFNF---------IGGYAERVAVAPSNILPT 128

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P  L   EA +L     T Y     R    AG+++LVLG AGG+GT  IQ+AK   GA  
Sbjct: 129 PPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKG-MGAKV 187

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF---------DVVFDAVGQC--DKA 228
           +A  + TA  + ++S+GAD+ +       E   +           D+V D +G    D A
Sbjct: 188 IAVVNRTAATEFVKSVGADIVLPLE----EGWAKAVREATGGAGVDMVVDPIGGPAFDDA 243

Query: 229 LKAVKEGGRVVSI 241
           ++ +   GR++ +
Sbjct: 244 VRTLASEGRLLVV 256

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score =  187 bits (477), Expect = 1e-57
 Identities = 72/252 (28%), Positives = 113/252 (44%), Gaps = 25/252 (9%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M A  + + G  +  L  +  V  PS  E +VL+KV A+ALN  D  +  G +       
Sbjct: 23  MLAVHFDKPGGPE-NLYVKE-VAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP-PPGA 79

Query: 61  PTIPGYDVAGVVEKVGSQVK-KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
             I G + +G V ++G   +  +K+GD     +           G  A+Y  V E LL  
Sbjct: 80  SNILGLEASGHVAELGPGCQGHWKIGDTAMALLP---------GGGQAQYVTVPEGLLMP 130

Query: 120 KPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS 178
            P+ L+  +AA++P A  TA++ L       AG  +L+  G  GVGT  IQL +   GA 
Sbjct: 131 IPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRM-AGA- 188

Query: 179 KVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVGQ--CDKAL 229
               T+ +  KL +   LGA    +Y KE+  +   KF      +++ D +G    +K +
Sbjct: 189 IPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNV 248

Query: 230 KAVKEGGRVVSI 241
             +   GR V  
Sbjct: 249 NCLALDGRWVLY 260

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  181 bits (462), Expect = 2e-55
 Identities = 54/340 (15%), Positives = 108/340 (31%), Gaps = 72/340 (21%)

Query: 1   MKAWVYKEYGNSQSVLKFETN-VEVPSLREDQVLIKVVAAALNPID---------FKRML 50
            +A +Y ++G  + VL  ++  ++  +L  ++V++K + + +NP D          K   
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63

Query: 51  GAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYT 110
                T  P     G +    V KVGS V   + GD V               G+   + 
Sbjct: 64  TTGFGTTEP-AAPCGNEGLFEVIKVGSNVSSLEAGDWVIPS--------HVNFGTWRTHA 114

Query: 111 AVEENLL-----------ALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLG 158
              ++               KP  L+  + A++ +   TAY  L      + GK   +  
Sbjct: 115 LGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQN 174

Query: 159 GA-GGVGTMVIQLAKHVFGASKVAATSSTA----KLDLLRSLGADLAIDYTKENIEDLPE 213
           G    VG    Q+ K     + ++           +  L+ LGA   I   + N  +   
Sbjct: 175 GGTSAVGKYASQIGKL-LNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGP 233

Query: 214 KF-----------DVVFDAVG--QCDKALKAVKEGGRVVSI---IGSVTPPASSFVLTSD 257
                         +  + VG        + +   G +++            +S  +  +
Sbjct: 234 TIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKN 293

Query: 258 GSI-------------------LEKLNPYFESGKVKAIID 278
            +                    L ++  ++E GK+     
Sbjct: 294 FTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKS 333

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  177 bits (450), Expect = 1e-53
 Identities = 77/315 (24%), Positives = 116/315 (36%), Gaps = 51/315 (16%)

Query: 1   MKAWVYKEYG-NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP 59
           M+  V      N +  +    +  VP   +  +L++     +N  D     G +  +   
Sbjct: 24  MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPS-VK 82

Query: 60  LPTIPGYDVAGVVEKVG-SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLA 118
            P   G++  G V  +G S   ++ VG  V               GS AEYT V  ++  
Sbjct: 83  PPFDIGFEGIGEVVALGLSASARYTVGQAVAYM----------APGSFAEYTVVPASIAT 132

Query: 119 LKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA 177
             P      E  +L ++  TAY  L E    S GK +LV   AGG G   +QL+K     
Sbjct: 133 PVPSVKP--EYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKK-AKC 189

Query: 178 SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAVG--QCDKALK 230
             +   SS  K   L+SLG D  I+Y  E +  +     PE  DVV+++VG    D A+ 
Sbjct: 190 HVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVD 249

Query: 231 AVKEGGRVVSI--IGSVTPPASSFV--------------LTSDGSIL-----------EK 263
           A+   GR++ I  I     P                    +  G  L             
Sbjct: 250 ALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSH 309

Query: 264 LNPYFESGKVKAIID 278
           L     SG +   +D
Sbjct: 310 LLEMCVSGDLVCEVD 324

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  172 bits (439), Expect = 5e-52
 Identities = 82/323 (25%), Positives = 133/323 (41%), Gaps = 49/323 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS-- 58
           M+A    E G   S+      + VP  +  QVLIKV AA +   D     G F       
Sbjct: 1   MRAVRLVEIGKPLSL----QEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVE 56

Query: 59  ----PLPTIPGYDVAGVVEKVGSQVKKFKVGDEV--YGDI-----------NEKALDHPK 101
                LP   G+++AG +E+VG +V  +  GD V                  E   D P+
Sbjct: 57  DLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPR 116

Query: 102 -----RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILV 156
                 +G+ AEY  V       K + L+ VEAA L  +  T Y  + +++    K++LV
Sbjct: 117 WLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLV 176

Query: 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI-EDLPEK- 214
           +G  GG+GTM +Q+AK V GA+ +        ++  +  GAD  I+ + ++   ++    
Sbjct: 177 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRIT 236

Query: 215 ----FDVVFDAVGQ---CDKALKAVKEGGRVVSI-IGSVTPPASSFVLTSD-----GSI- 260
                D V D            KA+ + G+ V + +        + ++T       GS+ 
Sbjct: 237 ESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLV 296

Query: 261 -----LEKLNPYFESGKVKAIID 278
                   +    E+GKVK +I 
Sbjct: 297 GNQSDFLGIMRLAEAGKVKPMIT 319

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score =  168 bits (429), Expect = 4e-51
 Identities = 76/243 (31%), Positives = 111/243 (45%), Gaps = 28/243 (11%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWV K  G    +     ++  P   E +V+++V A  LN  D    LGA+       
Sbjct: 1   MKAWVLKRLGGPLEL----VDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTR-LHP 55

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P IPG +V GVV            G      +           G LAE  AV +  L   
Sbjct: 56  PFIPGMEVVGVV-----------EGRRYAALVP---------QGGLAERVAVPKGALLPL 95

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           P+ LS  EAA+ P++  TAY  L+R+    G+ +LV   AG +GT  +Q+A+   G   +
Sbjct: 96  PEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARA-MGLRVL 154

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK-FDVVFDAVG-QCDKALKAVKEGGRV 238
           AA S   KL L  +LGA+ A  Y +           D+V +  G + +++L  +  GGR+
Sbjct: 155 AAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRL 214

Query: 239 VSI 241
           V I
Sbjct: 215 VYI 217

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  164 bits (418), Expect = 4e-49
 Identities = 67/276 (24%), Positives = 116/276 (42%), Gaps = 28/276 (10%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPID-FKRMLGAFSATDSP 59
           + A V  + G       +E  V+V S    QV ++  A  +N +D + R           
Sbjct: 2   VMAAVIHKKGGP-DNFVWE-EVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGE 59

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEV-YGDINEKALDHPKRNGSLAEYTAVEENLLA 118
            P + G++ A VVE+VG  V  F VG+ V                G+ ++        L 
Sbjct: 60  PPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPP---------LGAYSQERLYPAEKLI 110

Query: 119 LKPKNLSFVEA--ASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVF 175
             PK+L   +   A L L   TA   L ++     G  +L+   AGG+G +++  A+H+ 
Sbjct: 111 KVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHL- 169

Query: 176 GASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDK 227
           GA+ +   S+  K +  R LG    I+Y+ ++  ++       +  DVV+D++G+    K
Sbjct: 170 GATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQK 229

Query: 228 ALKAVKEGGRVVSI---IGSVTPPASSFVLTSDGSI 260
           +L  ++  G   +     G   P      L   GS+
Sbjct: 230 SLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSL 265

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  163 bits (415), Expect = 1e-48
 Identities = 84/273 (30%), Positives = 123/273 (45%), Gaps = 28/273 (10%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            K   +   G    VL++  + E  +     V+++  A  LN ID     G + A    L
Sbjct: 2   AKRIQFSTVGGP-EVLEYV-DFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA--PFL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-YGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
           P+  G + AGVVE VG +V +FKVGD V YG             G+ +E   + E  L  
Sbjct: 58  PSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGP---------LGAYSEVHVLPEANLVK 108

Query: 120 KPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGAS 178
              ++SF +AA+L L   T    L ++     G+ IL    AGGVG++  Q AK + GA 
Sbjct: 109 LADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKAL-GAK 167

Query: 179 KVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALK 230
            +   SS  K    ++LGA   IDY+ E++          +K  VV+D VGQ     +L 
Sbjct: 168 LIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLD 227

Query: 231 AVKEGGRVVSI---IGSVTPPASSFVLTSDGSI 260
           +V   G VVS     G V    +  +L    S+
Sbjct: 228 SVAPRGLVVSFGNASGPV-SGVNLGILAQKDSV 259

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  162 bits (412), Expect = 3e-48
 Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 28/273 (10%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
                + ++G    VL+           E+++ ++  A  +N ID     G +      L
Sbjct: 2   ATRIEFHKHGGP-EVLQAVE-FTPADPAENEIQVENKAIGINFIDTYIRSGLYPP--PSL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-YGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
           P+  G + AG+V KVGS VK  K GD V Y              G+ +    +  +  A+
Sbjct: 58  PSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSA---------LGAYSSVHNIIADKAAI 108

Query: 120 KPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGAS 178
            P  +SF +AA+  L   T Y  L ++      +  L    AGGVG +  Q AK + GA 
Sbjct: 109 LPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKAL-GAK 167

Query: 179 KVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALK 230
            +    +  K       GA   I+Y +E++ +        +K  VV+D+VG+   +++L 
Sbjct: 168 LIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLD 227

Query: 231 AVKEGGRVVSI---IGSVTPPASSFVLTSDGSI 260
            ++  G +VS     G+V    +  +L   GS+
Sbjct: 228 CLQRRGLMVSFGNSSGAV-TGVNLGILNQKGSL 259

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  159 bits (405), Expect = 3e-47
 Identities = 74/264 (28%), Positives = 116/264 (43%), Gaps = 34/264 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            K  +  E G    V+K+E    VPS+ E+++LIK     +N I+     G +       
Sbjct: 9   QKVILIDEIGGY-DVIKYED-YPVPSISEEELLIKNKYTGVNYIESYFRKGIYPC---EK 63

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-YGDINEKALDHPKRNGSLAEYTAV-EENLLA 118
           P + G + +G V   G  V  F+VGD+V Y             N + A+Y+ +  +  + 
Sbjct: 64  PYVLGREASGTVVAKGKGVTNFEVGDQVAYIS-----------NSTFAQYSKISSQGPVM 112

Query: 119 LKPKNLSFVE---AASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHV 174
             PK  S  E    A+  L   TA      +     G  +L+   AGGVG ++ QL K  
Sbjct: 113 KLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMK 172

Query: 175 FGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CD 226
            GA  +A  S+  KL + +  GA+  I+ +KE+I          +  D  FD+VG+   +
Sbjct: 173 -GAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFE 231

Query: 227 KALKAVKEGGRVVSI---IGSVTP 247
            +L A+K  G  VS     G + P
Sbjct: 232 ISLAALKRKGVFVSFGNASGLIPP 255

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  154 bits (391), Expect = 1e-44
 Identities = 72/274 (26%), Positives = 110/274 (40%), Gaps = 51/274 (18%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPI---DFKRMLGAFSATD 57
           MKA   +  GN    +    NV +P    D +L+KV A     I   D   + G F +T 
Sbjct: 24  MKAVRLESVGN----ISVR-NVGIPEPGPDDLLVKVEACG---ICGTDRHLLHGEFPST- 74

Query: 58  SPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDI-------------------NEKALD 98
              P   G++  G+V + GS V+    G  + GD                    N +A+ 
Sbjct: 75  --PPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIG 132

Query: 99  HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVL 157
              R+G  AEY  V        P  L  V  A   PLA      G++ S   AG ++ +L
Sbjct: 133 IH-RDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLA--CCLHGVDLSGIKAGSTVAIL 189

Query: 158 GGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIED------ 210
            G G +G + +QLA+   GA+ V  +     K  L   +GA   +D +  ++ +      
Sbjct: 190 -GGGVIGLLTVQLARL-AGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPV 247

Query: 211 --LPEKFDVVFDAVGQ---CDKALKAVKEGGRVV 239
             +P   DVV +  G      ++ +  K GG VV
Sbjct: 248 GLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVV 281

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  145 bits (368), Expect = 1e-41
 Identities = 74/323 (22%), Positives = 123/323 (38%), Gaps = 46/323 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA + K++    S+     +V +P  + ++VLI++  A +   D +   G  +     L
Sbjct: 4   SKAALLKKFSEPLSI----EDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRL 59

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV--YGDI-----------NEKALDHPK-----R 102
           P I G++ AG + +VG  + K K GD V  Y                    +        
Sbjct: 60  PIILGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTT 118

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGK---SILVLGG 159
           NG  +EY  V+ +   +K  +LS VEAA L  A  T+   + ++     K    ++++ G
Sbjct: 119 NGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNG 178

Query: 160 AGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTK--ENIEDLPEK-- 214
            GG+    IQ+ K +     +   S S    D    LGAD   +       I  L +   
Sbjct: 179 IGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLG 238

Query: 215 FDVVFDAVGQ---CDKALKAVKEGGRVVSI-IGSVTPPASSFVLTSD-----GSI----- 260
             +  D VG         K + + G ++ + +        +F          GS      
Sbjct: 239 ASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLN 298

Query: 261 -LEKLNPYFESGKVKAIIDPKGL 282
            LE +    ESGK+K  I    L
Sbjct: 299 DLEDVVRLSESGKIKPYIIKVPL 321

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  143 bits (363), Expect = 6e-41
 Identities = 75/327 (22%), Positives = 116/327 (35%), Gaps = 50/327 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA  Y E G+   V     ++  P+    ++L+KV AA L   D   M    +     L
Sbjct: 1   MKAVQYTEIGSEPVV----VDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGL 56

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-----------------------YGDINEKAL 97
           P   G++  G V ++G  V  F VGD V                                
Sbjct: 57  PLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITP 116

Query: 98  DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA--FSAGKSIL 155
                 GS+AEY  V+     +   +L  V AA L  A  T Y  + R       G + +
Sbjct: 117 PGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAV 176

Query: 156 VLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK- 214
           V+G  GG+G + IQ+ + V  A  +A      +L L R +GAD A+       + + E  
Sbjct: 177 VIG-VGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELT 235

Query: 215 ----FDVVFDAVGQ---CDKALKAVKEGGRVVSI---IGSVTPPASSFVLTS---DGSI- 260
                  VFD VG     D A + V   G +  +    G+        +           
Sbjct: 236 GGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYW 295

Query: 261 -----LEKLNPYFESGKVKAIIDPKGL 282
                L ++     +G++    +   L
Sbjct: 296 GTRSELMEVVALARAGRLDIHTETFTL 322

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  138 bits (351), Expect = 4e-39
 Identities = 55/297 (18%), Positives = 110/297 (37%), Gaps = 52/297 (17%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPI---DFKRMLGAFSAT 56
           MK+ V    G     ++      +P ++ +D+V +K+ ++    +   D  R+    +  
Sbjct: 1   MKSVVNDTDGI----VRVA-ESVIPEIKHQDEVRVKIASSG---LCGSDLPRIFKNGAH- 51

Query: 57  DSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGD-------------------INEKAL 97
               P   G++ +G ++ VGS V     GD V                           +
Sbjct: 52  --YYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFI 109

Query: 98  DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILV 156
               R+G  AEY  V+   +   P ++   + A + P+           +     K++++
Sbjct: 110 GSR-RDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITV--GLHAFHLAQGCENKNVII 166

Query: 157 LGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIEDLPEK- 214
           +G AG +G + IQ A    GA  V A   S+ KL L +S GA    + ++ +   +    
Sbjct: 167 IG-AGTIGLLAIQCAVA-LGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVL 224

Query: 215 -----FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEK 263
                  ++ +  G     + A++      ++  ++G            + G IL K
Sbjct: 225 RELRFNQLILETAGVPQTVELAVEIAGPHAQLA-LVG-TLHQDLHLTSATFGKILRK 279

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  138 bits (349), Expect = 9e-39
 Identities = 75/326 (23%), Positives = 134/326 (41%), Gaps = 49/326 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAF-SATDS 58
           +KA    EY      L+ E  V+ P L     V++++  A +   D   + G +      
Sbjct: 16  LKAARLHEYNKP---LRIED-VDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQP 71

Query: 59  PLPTIPGYDVAGVVEKVGSQVKKFKVGDEV--YGDI-----------NEKALDHPK---- 101
            LP   G++  G +E+V   V+  + GD V  +  +            +   ++ +    
Sbjct: 72  KLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL 131

Query: 102 -RNGSLAEYTAVEENLLALKPKNLSF---VEAASLPLATETAYEGLERSAFS--AGKSIL 155
             +G  AE+       +   PK++S    VE A L  A  TAY  ++++A +   G  + 
Sbjct: 132 NIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVA 191

Query: 156 VLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK- 214
           +  G GG+G + +QL K +  A+ +A      KL L   LGAD  +D  ++ ++ + E  
Sbjct: 192 I-VGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELT 250

Query: 215 ----FDVVFDAVGQ---CDKALKAVKEGGRVVSI--IGSVTPPASSFVLTS---DGSI-- 260
                +V  D VG     D     +   GR++ +   G +  P    + +    +GS+  
Sbjct: 251 RGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGGELRFPTIRVISSEVSFEGSLVG 310

Query: 261 ----LEKLNPYFESGKVKAIIDPKGL 282
               L +L      GKV+  +D   L
Sbjct: 311 NYVELHELVTLALQGKVRVEVDIHKL 336

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  138 bits (349), Expect = 1e-38
 Identities = 44/242 (18%), Positives = 78/242 (32%), Gaps = 44/242 (18%)

Query: 15  VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGA---------------------- 52
            L  ++ ++ P    D+VLI++ A+ LNP D   + GA                      
Sbjct: 19  ELSLDS-IDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVP 77

Query: 53  -----FSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLA 107
                  A         G + AGVV + GS      +  +    I              +
Sbjct: 78  EGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG---------GAMYS 128

Query: 108 EYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMV 167
           +Y  +  +   + P+  +  + AS  +   TA   +E        +++    A  +G M+
Sbjct: 129 QYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMRLEGHSALVHTAAASNLGQML 188

Query: 168 IQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDA 221
            Q+     G   V       + DLL++ GA    +                    + FDA
Sbjct: 189 NQICLK-DGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEALVSTGATIAFDA 247

Query: 222 VG 223
            G
Sbjct: 248 TG 249

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  135 bits (343), Expect = 7e-38
 Identities = 70/273 (25%), Positives = 113/273 (41%), Gaps = 47/273 (17%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPI---DFKRML-GAFSAT 56
           M A +  + G      +    V+VP     +VLIKV+A +   I   D        ++ +
Sbjct: 5   MVAIMKTKPGYG---AELV-EVDVPKPGPGEVLIKVLATS---ICGTDLHIYEWNEWAQS 57

Query: 57  DSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGD-------------------INEKAL 97
               P I G++VAG V ++G  V+  +VGD V  +                    N K  
Sbjct: 58  RIKPPQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIF 117

Query: 98  DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILV 156
                +G  AEY  V    +   PK++    A    PL    A + +  +   +GKS+L+
Sbjct: 118 GVD-TDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGN--AVDTV-LAGPISGKSVLI 173

Query: 157 LGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIEDL---- 211
            G AG +G + I +AK   GA  V  +  S  + +L + +GAD  I+  +E++       
Sbjct: 174 TG-AGPLGLLGIAVAKA-SGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDI 231

Query: 212 --PEKFDVVFDAVGQ---CDKALKAVKEGGRVV 239
                 DV  +  G     ++ L+AV   GRV 
Sbjct: 232 TDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVS 264

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  128 bits (325), Expect = 2e-35
 Identities = 66/292 (22%), Positives = 114/292 (39%), Gaps = 52/292 (17%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPI---D---FKRMLGAFS 54
           M+A            L    +  VP     ++L++V AA+   I   D   +K    A++
Sbjct: 1   MRALAKLAPEEG---LTLV-DRPVPEPGPGEILVRVEAAS---ICGTDLHIWKW--DAWA 51

Query: 55  ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGD-------------------INEK 95
                 P + G++ +GVVE VG  V++ +VGD V  +                   +N +
Sbjct: 52  RGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQ 111

Query: 96  ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSI 154
            L    R+G  AEY  V      + PK+L F  AA L P     A   +   +  +GKS+
Sbjct: 112 ILGVD-RDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFG--NAVHTVYAGSGVSGKSV 168

Query: 155 LVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIED--- 210
           L+  GAG +G M   + +   GA  +  +  +  +L   R       ++  +E++ +   
Sbjct: 169 LIT-GAGPIGLMAAMVVRA-SGAGPILVSDPNPYRLAFARPYADR-LVNPLEEDLLEVVR 225

Query: 211 --LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSD 257
                  +V+ +  G      + L A+  GG     I  +      F L  +
Sbjct: 226 RVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEAR--ILGIPSDPIRFDLAGE 275

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  125 bits (317), Expect = 3e-34
 Identities = 72/265 (27%), Positives = 110/265 (41%), Gaps = 33/265 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V + +G     L  +  V VP     QV +K+ A+ +   D     G +      L
Sbjct: 3   MKAAVVRAFGAP---LTIDE-VPVPQPGPGQVQVKIEASGVCHTDLHAADGDW-PVKPTL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV----YGDI----------NEKALDHPK----- 101
           P IPG++  G V  VGS V + K GD V                   E   +  +     
Sbjct: 58  PFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYS 117

Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
            NG   EY   + N + L P  + FVE A +  A  T Y+GL+ +    G+ + V+ G G
Sbjct: 118 VNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTDTRPGQWV-VISGIG 176

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK----FDV 217
           G+G + +Q A+   G    A     AKL+L R LGA++A++    +     +K       
Sbjct: 177 GLGHVAVQYARA-MGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHG 235

Query: 218 VFDAVGQ---CDKALKAVKEGGRVV 239
           V           +A+  V+ GG + 
Sbjct: 236 VLVTAVSPKAFSQAIGMVRRGGTIA 260

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  124 bits (314), Expect = 1e-33
 Identities = 68/285 (23%), Positives = 117/285 (41%), Gaps = 47/285 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPID---FKRMLGAFSATD 57
             + V    G+    L+ E N  +P    ++VL+++ +  +   D   ++   G      
Sbjct: 8   NLSLVVHGPGD----LRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEY--GRIGNFI 60

Query: 58  SPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV---------------YGDINE----KALD 98
              P + G++ +G VEKVGS VK  K GD V                G  N         
Sbjct: 61  VKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCA 120

Query: 99  HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVL 157
            P  +G+L  +           P N++F E A + PL+         R   + G  +LV 
Sbjct: 121 TPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLS--VGIHACRRGGVTLGHKVLVC 178

Query: 158 GGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIED------ 210
            GAG +G + + +AK   GA++V  T  S  +L   + +GADL +  +KE+ ++      
Sbjct: 179 -GAGPIGMVTLLVAKA-MGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE 236

Query: 211 --LPEKFDVVFDAVG--QC-DKALKAVKEGGRVVSIIGSVTPPAS 250
             L  K +V  +  G        + A + GG +V ++G  +   +
Sbjct: 237 GQLGCKPEVTIECTGAEASIQAGIYATRSGGTLV-LVGLGSEMTT 280

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  122 bits (309), Expect = 6e-33
 Identities = 69/293 (23%), Positives = 115/293 (39%), Gaps = 62/293 (21%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAAL----------NPIDFKRML 50
             + V  +  +    L+ E    +P  +ED+VL+++    +            I      
Sbjct: 5   NLSAVLYKQND----LRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRI------ 53

Query: 51  GAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV---------------YGDINE- 94
             F   D   P + G++ +G V KVG  VK  K GD V                G  N  
Sbjct: 54  ADFIVKD---PMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLC 110

Query: 95  ---KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSA 150
                   P  +G+LA Y     +     P N+S  E A L PL+         R+    
Sbjct: 111 PDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLS--VGVHACRRAGVQL 168

Query: 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAIDYTKENI 208
           G ++LV+ GAG +G + +  AK  +GA  V    S  +L++ ++ GAD  L +D  KE  
Sbjct: 169 GTTVLVI-GAGPIGLVSVLAAKA-YGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEE 226

Query: 209 EDLPEK--------FDVVFDAVG--QC-DKALKAVKEGGRVVSIIGSVTPPAS 250
             + E+         +V  D  G  +C    +   + GG ++ ++G  +   +
Sbjct: 227 SSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLM-LVGMGSQMVT 278

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  121 bits (306), Expect = 1e-32
 Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 34/267 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            K  ++ E       L+++  + VP  + +++LI V  + +   D     G +      L
Sbjct: 6   QKGVIFYESH---GKLEYKD-IPVPKPKANELLINVKYSGVCHTDLHAWHGDW-PLPVKL 60

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV----YGDI----------NEKALDHPK----- 101
           P + G++ AGVV  +G  VK +K+GD                    NE    H       
Sbjct: 61  PLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYT 120

Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
            +GS  +Y   +    A  P+     + A +  A  T Y+ L+ +   AG  + + G AG
Sbjct: 121 HDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAG 180

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN------IEDLPEKF 215
           G+G++ +Q AK   G   +       K +L RS+G ++ ID+TKE       ++      
Sbjct: 181 GLGSLAVQYAK-AMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGA 239

Query: 216 DVVFDAVGQ---CDKALKAVKEGGRVV 239
             V +        + + + V+  G  V
Sbjct: 240 HGVINVSVSEAAIEASTRYVRANGTTV 266

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  121 bits (305), Expect = 2e-32
 Identities = 77/265 (29%), Positives = 118/265 (44%), Gaps = 33/265 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V +++      LK +  VE P++   +VL+++ A  +   D     G +      L
Sbjct: 1   MKAAVVEQFKEP---LKIKE-VEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPV-KPKL 55

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-----YG---------DINEKALDHPK----- 101
           P IPG++  G+VE+VG  V   KVGD V     Y             E   +H K     
Sbjct: 56  PLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYS 115

Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
            +G  AEY     + +   P NLSF EAA +  A  T Y+ L+ +    G+ + + G  G
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGI-G 174

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI-EDLPEK---FDV 217
           G+G + +Q AK   G + VA      KL+L + LGADL ++  KE+  + + EK      
Sbjct: 175 GLGHVAVQYAK-AMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHA 233

Query: 218 VFDAVGQC---DKALKAVKEGGRVV 239
                        A  +++ GG  V
Sbjct: 234 AVVTAVSKPAFQSAYNSIRRGGACV 258

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  120 bits (303), Expect = 8e-32
 Identities = 57/300 (19%), Positives = 114/300 (38%), Gaps = 59/300 (19%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
             A V +++      L ++   E+  +    +L+++++A +   D     G       PL
Sbjct: 18  AHAMVLEKFNQP---LVYKE-FEISDIPRGSILVEILSAGVCGSDVHMFRGEDP--RVPL 71

Query: 61  PTIPGYDVAGVVEKVGSQVK-----KFKVGDEVYGD------------------------ 91
           P I G++ AG V +V  + +       K GD +  +                        
Sbjct: 72  PIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRK 131

Query: 92  ---INEKALDHPKRNGSLAEYTAV--EENLLALKPKNLSFVEAASLPLATETAYEGLERS 146
              IN    ++P   G  + +  +  E ++L +  +       A    +  TAY   +  
Sbjct: 132 VYGINRGCSEYPHLRGCYSSHIVLDPETDVLKV-SEKDDLDVLAMAMCSGATAYHAFDEY 190

Query: 147 AF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYT 204
               AGK++++ G AG +G   + +A+ + GA  V     S  +L L   +GADL ++  
Sbjct: 191 PESFAGKTVVIQG-AGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEEIGADLTLNRR 248

Query: 205 KENIEDLPEK---------FDVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPASSF 252
           + ++E+  +           D + +A G      +  + ++ GG    + G V  P    
Sbjct: 249 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYS-VAG-VAVPQDPV 306

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score =  122 bits (308), Expect = 2e-31
 Identities = 64/237 (27%), Positives = 95/237 (40%), Gaps = 37/237 (15%)

Query: 19  ETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78
           +       L + +V I + AA +N  D    LG +     P     G + AGVV + G  
Sbjct: 228 DEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMY-----PGVASLGSEGAGVVVETGPG 282

Query: 79  VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATET 138
           V     GD V G              +       +  ++   P   SF  AAS+P+   T
Sbjct: 283 VTGLAPGDRVMG----------MIPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLT 332

Query: 139 AYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----- 192
           AY  L   A    G+S+LV   AGGVG   IQLA+H+ GA +V AT+S  K   +     
Sbjct: 333 AYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHL-GA-EVYATASEDKWQAVELSRE 390

Query: 193 -----RSLG-ADLAIDYTKENIEDLPEKFDVVFDAVG--QCDKALKAVKEGGRVVSI 241
                R+       +  T           DVV +++     D +L+ +  GGR + +
Sbjct: 391 HLASSRTCDFEQQFLGATGG------RGVDVVLNSLAGEFADASLRMLPRGGRFLEL 441

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  114 bits (286), Expect = 2e-29
 Identities = 56/303 (18%), Positives = 108/303 (35%), Gaps = 62/303 (20%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAA-----LNPIDFKRMLGAFS 54
           + + V++        ++ E  V  P + +  +++IKV A       ++            
Sbjct: 32  LGSKVWRYPE-----VRVE-EVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILY 85

Query: 55  ATDSPLPTIPGYDVAGVVEKVGSQV------KKFKVGDEVYGD----------------- 91
              +  P   G++ +GVV + G +       K+F++G+ V  +                 
Sbjct: 86  PGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPN 145

Query: 92  --INEKALDHPKRNGSLAEYTAVEENLL-------ALKPKNLSFVEAASL-PLATETAYE 141
              N   L     +G+ AEY  V+            +   +  F+  + + P +      
Sbjct: 146 HCENLNELGFN-VDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAV 204

Query: 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLA 200
            +       G ++++LG  G +G   + + KH  GASKV  +  S  + +L + LGAD  
Sbjct: 205 IVRGGGIRPGDNVVILG-GGPIGLAAVAILKH-AGASKVILSEPSEVRRNLAKELGADHV 262

Query: 201 IDYTKENIEDL------PEKFDVVFDAVG------QCDKALKAVKEGGRV-VSIIGSVTP 247
           ID TKEN  +            +  +A G         + +     G    V+I+     
Sbjct: 263 IDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADA 322

Query: 248 PAS 250
              
Sbjct: 323 KIP 325

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  109 bits (275), Expect = 4e-28
 Identities = 64/275 (23%), Positives = 98/275 (35%), Gaps = 51/275 (18%)

Query: 16  LKFETNVEVPSLREDQVLIKVVAAALNPI---D---FKRMLGAFSATDSPLPTIPGYDVA 69
              E+  +   L+E +V + V +     I   D   +K   G           + G++ A
Sbjct: 27  PSLESVQKGEELKEGEVTVAVRSTG---ICGSDVHFWKH--GCIGPMIVECDHVLGHESA 81

Query: 70  GVVEKVGSQVKKFKVGDEV---------------YGDINE----KALDHPKRNGSLAEYT 110
           G V  V   VK  KVGD V                G  N       L  P   G L  Y 
Sbjct: 82  GEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYV 141

Query: 111 AVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQ 169
                    K  N+S+   A L PL+   A  GL+R+    G  +L+ G AG +G + + 
Sbjct: 142 NHPAVWC-HKIGNMSYENGAMLEPLSV--ALAGLQRAGVRLGDPVLICG-AGPIGLITML 197

Query: 170 LAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTK-ENIEDLPEK---------FDVV 218
            AK   GA  +  T     +L   + +  ++     +  + E+  +K           V 
Sbjct: 198 CAKA-AGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVA 256

Query: 219 FDAVG--QC-DKALKAVKEGGRVVSIIGSVTPPAS 250
            +  G       A+ AVK GG+V  +IG       
Sbjct: 257 LECTGVESSIAAAIWAVKFGGKVF-VIGVGKNEIQ 290

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  107 bits (269), Expect = 3e-27
 Identities = 47/286 (16%), Positives = 90/286 (31%), Gaps = 63/286 (22%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPID------FKRMLGAFS 54
           MKA   K   +             P     + L++ +      +            G F 
Sbjct: 1   MKAIAVKRGEDR---PVVI-EKPRPEPESGEALVRTLRVG---VCGTDHEVIAGGHGGFP 53

Query: 55  ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG-----------------------D 91
             +  L  + G++  GVV        + + GD V                         D
Sbjct: 54  EGEDHL--VLGHEAVGVVVDPN--DTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPD 109

Query: 92  INEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL--PLATETAYEGLERSAFS 149
                      +G ++E+    E  L   P++ +  E   L  P++     + LE +  S
Sbjct: 110 GMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA--ELGFLIEPISI--TEKALEHAYAS 165

Query: 150 A------GKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSST----AKLDLLRSLGAD 198
                    S  VLG  G +G + + + K    G   +            +D++  L A 
Sbjct: 166 RSAFDWDPSSAFVLG-NGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDAT 224

Query: 199 LAI--DYTKENIEDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVV 239
                    E++ D+ E+ D +++A G      ++++A+   G   
Sbjct: 225 YVDSRQTPVEDVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGA 270

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  106 bits (266), Expect = 1e-26
 Identities = 49/312 (15%), Positives = 95/312 (30%), Gaps = 63/312 (20%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPID------FKRMLGAF 53
           MKA + K       V     +V+   L    ++ I+ +      I           L   
Sbjct: 1   MKAIIVKPPNAGVQV----KDVDEKKLDSYGKIKIRTIYNG---ICGADREIVNGKLTLS 53

Query: 54  SATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINE------------------- 94
           +        + G++  GVVE+       F  GD V                         
Sbjct: 54  TLPKGKDFLVLGHEAIGVVEES---YHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETG 110

Query: 95  --KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA------------TETAY 140
                   K +G + E+   +   L   PK++  +   + PLA             +   
Sbjct: 111 EFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSIEEILEVQKRVP 170

Query: 141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA 200
                      + +LV+G  G +G +   L +  +G     A       ++ +++  +  
Sbjct: 171 VWTCDDGTLNCRKVLVVG-TGPIGVLFTLLFRT-YGLEVWMANRR-EPTEVEQTVIEETK 227

Query: 201 IDYTK-----ENIEDLPEKFDVVFDAVGQ----CDKALKAVKEGGRVVSIIGSVTPPASS 251
            +Y       + ++D   KFDV+ DA G         +  +   G +  + G  T  +  
Sbjct: 228 TNYYNSSNGYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLG-LFGFSTSGSVP 286

Query: 252 FVLTSDGSILEK 263
               +   I+  
Sbjct: 287 LDYKTLQEIVHT 298

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score =  102 bits (256), Expect = 1e-24
 Identities = 45/230 (19%), Positives = 76/230 (33%), Gaps = 28/230 (12%)

Query: 25   PSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKV 84
                    L  V   +LN  D     G          +IPG  +            +   
Sbjct: 1555 LPASCQDRLCSVYYTSLNFRDVMLATGKL-----SPDSIPGKWLTRDCMLGMEFSGRDAS 1609

Query: 85   GDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL- 143
            G  V G +             LA    + ++     P   +  EAAS+P+   TAY  L 
Sbjct: 1610 GRRVMGMV---------PAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLV 1660

Query: 144  ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY 203
             R     G+S+L+  G+GGVG   I +A    G        S  K   L++    L    
Sbjct: 1661 VRGRMQPGESVLIHSGSGGVGQAAIAIALS-RGCRVFTTVGSAEKRAYLQARFPQLDETC 1719

Query: 204  -----TKENIEDLPEK-----FDVVFDAVGQ--CDKALKAVKEGGRVVSI 241
                      + +         D+V +++ +     +++ + + GR + I
Sbjct: 1720 FANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEI 1769

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 92.0 bits (229), Expect = 8e-22
 Identities = 65/261 (24%), Positives = 98/261 (37%), Gaps = 38/261 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP- 59
           M+A + ++          +  +E   L    V + V  ++LN   +K  L   + T    
Sbjct: 1   MQALILEQQDGKTLA-SVQH-LEESQLPAGDVTVDVHWSSLN---YKDAL---AITGKGK 52

Query: 60  ----LPTIPGYDVAGVVEKVGSQVKKFKVGDEV----YGDINEKALDHPKRNGSLAEYTA 111
                P IPG D AG V    S+  +F  G EV    +G + E         G LAE   
Sbjct: 53  IIRHFPMIPGIDFAGTVHA--SEDPRFHAGQEVLLTGWG-VGE------NHWGGLAERAR 103

Query: 112 VEENLLALKPKNLSFVEAASLPLATETA----YEGLERSAFSAGKSILVLGGAGGVGTMV 167
           V+ + L   P  LS   A  +  A  TA        +         ++V G +GGVG+  
Sbjct: 104 VKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTA 163

Query: 168 IQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLP---EKFDVVFDAVG- 223
           + L     G    A +   +    L+SLGA+  +    E  E  P   + +    D VG 
Sbjct: 164 VALLHK-LGYQVAAVSGRESTHGYLKSLGANRILS-RDEFAESRPLEKQLWAGAIDTVGD 221

Query: 224 -QCDKALKAVKEGGRVVSIIG 243
               K L  +  GG  V+  G
Sbjct: 222 KVLAKVLAQMNYGG-CVAACG 241

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 89.5 bits (223), Expect = 8e-21
 Identities = 63/283 (22%), Positives = 104/283 (36%), Gaps = 57/283 (20%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAA-----LNPIDFKRMLGAFSA 55
           MK +     G     + +    E P+      +++ +A A     ++ +           
Sbjct: 1   MKGFAMLSIGK----VGWIE-KEKPAPGPFDAIVRPLAVAPCTSDIHTVF-----EGAIG 50

Query: 56  TDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV----------------------YGDIN 93
                  I G++  G V +VGS+VK FK GD V                       G + 
Sbjct: 51  ERHN--MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLA 108

Query: 94  EKALDHPKRNGSLAEYTAV---EENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSA 150
                + K +G   E+  V   + NL  L PK +    A  +P    T + G E +    
Sbjct: 109 GWKFSNVK-DGVFGEFFHVNDADMNLAHL-PKEIPLEAAVMIPDMMTTGFHGAELANIKL 166

Query: 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGADLAIDYTKEN-I 208
           G ++ V+G  G VG M +  A H  GA ++ A  S     D+    GA   I+Y   + +
Sbjct: 167 GDTVCVIG-IGPVGLMSVAGANH-LGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIV 224

Query: 209 EDLPEK-----FDVVFDAVGQC---DKALKAVKEGGRVVSIIG 243
           E + +       D V  A G      +A+K +K G   +  + 
Sbjct: 225 EQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGS-DIGNVN 266

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 88.5 bits (220), Expect = 1e-20
 Identities = 66/262 (25%), Positives = 111/262 (42%), Gaps = 40/262 (15%)

Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP-- 59
           +A+V  +     +    +T + +  L E  VL++V  +++N   +K  L   ++      
Sbjct: 5   QAFVVNKTETEFTA-GVQT-ISMDDLPEGDVLVRVHYSSVN---YKDGL---ASIPDGKI 56

Query: 60  ---LPTIPGYDVAGVVEKVGSQVKKFKVGDEV----YGDINEKALDHPKRNGSLAEYTAV 112
               P +PG D+AGVV    SQ  +F+ GDEV    Y  I           G  +EY  +
Sbjct: 57  VKTYPFVPGIDLAGVVVS--SQHPRFREGDEVIATGYE-IGVT------HFGGYSEYARL 107

Query: 113 EENLLALKPKNLSFVEAASLPLATETAYEGL----ERSAFSAGKSILVLGGAGGVGTMVI 168
               L   PK L+  EA ++  A  TA   +    E         +LV G  GGVG++ +
Sbjct: 108 HGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAV 167

Query: 169 QLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVG 223
            +     G +  A+T   A+ D LR LGA   +   ++ + +       +++    D VG
Sbjct: 168 SMLAK-RGYTVEASTGKAAEHDYLRVLGAKEVLA-REDVMAERIRPLDKQRWAAAVDPVG 225

Query: 224 --QCDKALKAVKEGGRVVSIIG 243
                  L  ++ GG  V++ G
Sbjct: 226 GRTLATVLSRMRYGG-AVAVSG 246

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 87.8 bits (218), Expect = 3e-20
 Identities = 72/262 (27%), Positives = 109/262 (41%), Gaps = 40/262 (15%)

Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP-- 59
           +A   ++  +  SV   +T +    L +D VLIKV  + +N   +K  L   +       
Sbjct: 6   QALQAEKNADDVSV-HVKT-ISTEDLPKDGVLIKVAYSGIN---YKDGL---AGKAGGNI 57

Query: 60  ---LPTIPGYDVAGVVEKVGSQVKKFKVGDEV----YGDINEKALDHPKRNGSLAEYTAV 112
               P I G D AG V    S   +F  GDEV    Y  +         R+G L+EY +V
Sbjct: 58  VREYPLILGIDAAGTVVS--SNDPRFAEGDEVIATSYE-LGV------SRDGGLSEYASV 108

Query: 113 EENLLALKPKNLSFVEAASLPLATETAYEGLERSAFS----AGKSILVLGGAGGVGTMVI 168
             + L   P+NLS  EA     A  TA   + R   +       S+LV G  GGVG + +
Sbjct: 109 PGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAV 168

Query: 169 QLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLP-----EKFDVVFDAVG 223
            +     G   VA+T +    D L+ LGA   I   ++  +        +++    D VG
Sbjct: 169 SMLNK-RGYDVVASTGNREAADYLKQLGASEVIS-REDVYDGTLKALSKQQWQGAVDPVG 226

Query: 224 --QCDKALKAVKEGGRVVSIIG 243
             Q    L  ++ GG  V++ G
Sbjct: 227 GKQLASLLSKIQYGG-SVAVSG 247

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score = 86.4 bits (215), Expect = 1e-19
 Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 49/260 (18%)

Query: 2   KAWVYKEY--GN-SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS 58
           K+W  K++  G  +QS  + +T VE+P L+  +VL++ +  +++P               
Sbjct: 9   KSWTLKKHFQGKPTQSDFELKT-VELPPLKNGEVLLEALFLSVDPYMRIAS--------K 59

Query: 59  PLP---TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEEN 115
            L     + G  VA VVE   S+   F  G  V                    +   +  
Sbjct: 60  RLKEGAVMMGQQVARVVE---SKNSAFPAGSIVLA------------QSGWTTHFISDGK 104

Query: 116 LLALKPKNLSFVEAASLPLATE-------TAYEGLERSA-FSAGKSILVLGGAGGVGTMV 167
              L+     + +   L LA         TAY GL        G+++LV   AG VG++V
Sbjct: 105 --GLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVV 162

Query: 168 IQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN--IEDL----PEKFDVVFDA 221
            Q+AK + G   V A  S  K+  L+ +G D A +Y   N   E L    P+ +D  FD 
Sbjct: 163 GQIAK-LKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDN 221

Query: 222 VG--QCDKALKAVKEGGRVV 239
           VG    +  L  +K+ G++ 
Sbjct: 222 VGGEFLNTVLSQMKDFGKIA 241

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 79.9 bits (198), Expect = 3e-18
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 115 NLLALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKH 173
           +L+   P  L+  EAA+  +A  TA+  L      S G+ +L+    GGVG   + +AK 
Sbjct: 2   DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKM 61

Query: 174 VFGASKVAAT-SSTAKLDLLRSLGAD 198
           + GA ++  T  S AK ++L  LG +
Sbjct: 62  I-GA-RIYTTAGSDAKREMLSRLGVE 85

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 78.0 bits (193), Expect = 1e-16
 Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 33/196 (16%)

Query: 57  DSPLPTIPGYDVAGVVEKVGSQVKKFKVGD---------------------EVY-----G 90
            S  P +PG+++ G V +VGS+VKK  VGD                     E Y      
Sbjct: 67  FSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMIL 126

Query: 91  DINEKALDHPKRNGSLAEYTAVEENLLALK-PKNLSFVEAASLPLATETAYEGLERS-AF 148
                  D     G  + +    E    ++ P N+     A L  A  T Y  L+     
Sbjct: 127 TYASIYHDGTITYGGYSNHMVANERY-IIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLD 185

Query: 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-DLLRSLGADLAIDYT-KE 206
             GK I ++G  GG+G + ++ AK  FG+     ++S +K  + L++ GAD  +    +E
Sbjct: 186 EPGKHIGIVGL-GGLGHVAVKFAK-AFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQE 243

Query: 207 NIEDLPEKFDVVFDAV 222
            ++      D + D V
Sbjct: 244 QMQAAAGTLDGIIDTV 259

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score = 77.6 bits (192), Expect = 1e-16
 Identities = 66/269 (24%), Positives = 107/269 (39%), Gaps = 53/269 (19%)

Query: 2   KAWVYKEY--GN-SQSVLKFETNVEVPS---LREDQVLIKVVAAALNPIDFKRMLGAFSA 55
           K  + K+Y  G  ++S   F T   V        + VL+K +  + +P    RM     +
Sbjct: 6   KQVILKDYVSGFPTESDFDFTT-TTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPS 64

Query: 56  TDSPLP------TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEY 109
           T +          I GY V+ ++E   S    +K GD ++G              +  EY
Sbjct: 65  TAALAQAYTPGQPIQGYGVSRIIE---SGHPDYKKGDLLWG------------IVAWEEY 109

Query: 110 TAVEENLLALKPKNLSFVEAASLPLAT---------ETAYEGLERSA-FSAGKSILVLGG 159
           + +     A        ++   +PL+           TAY G         G+++ V   
Sbjct: 110 SVITPMTHAHFK-----IQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAA 164

Query: 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKEN--IEDL----P 212
           +G VG +V QLAK + G   V +  S  K+DLL++  G D A +Y +E+     L    P
Sbjct: 165 SGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFP 223

Query: 213 EKFDVVFDAVG--QCDKALKAVKEGGRVV 239
              D+ F+ VG    D  L  +   GR+ 
Sbjct: 224 NGIDIYFENVGGKMLDAVLVNMNMHGRIA 252

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 77.6 bits (192), Expect = 1e-16
 Identities = 47/196 (23%), Positives = 76/196 (38%), Gaps = 38/196 (19%)

Query: 57  DSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV---------------------------- 88
           +   P IPG+++AG++++VG  VKKFK+GD V                            
Sbjct: 55  EGIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVF 114

Query: 89  -YGDINEKALDHPKRNGSLAEYTAVEENLLALK-PKNLSFVEAASLPLATETAYEGLERS 146
            Y  + +   D+    G  +    V+EN   +   KN    + A L  A  T Y  L+ S
Sbjct: 115 TYDCL-DSFHDNEPHMGGYSNNIVVDENY-VISVDKNAPLEKVAPLLCAGITTYSPLKFS 172

Query: 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE 206
             + G  + V G  GG+G+M ++ A    GA       +  K     S+G        K+
Sbjct: 173 KVTKGTKVGVAG-FGGLGSMAVKYAV-AMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQ 230

Query: 207 NIEDLPEKFDVVFDAV 222
                 E+ D +   +
Sbjct: 231 ----CKEELDFIISTI 242

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 77.2 bits (191), Expect = 2e-16
 Identities = 56/196 (28%), Positives = 83/196 (42%), Gaps = 33/196 (16%)

Query: 57  DSPLPTIPGYDVAGVVEKVGSQVKKFKVGD---------------------EVY-----G 90
            S  P +PG++V G V +VGS V KF VGD                     E Y      
Sbjct: 60  MSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIW 119

Query: 91  DINEKALDHPKRNGSLAEYTAVEENLLALK-PKNLSFVEAASLPLATETAYEGLERSAF- 148
             N+  ++     G  A+ T V +    +K P+ ++  +AA L  A  T Y  L      
Sbjct: 120 SYNDVYINGQPTQGGFAKATVVHQKF-VVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLK 178

Query: 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-DLLRSLGADLAIDYT-KE 206
             G    +LG  GGVG M +++AK   G      +SS  K  + L+ LGAD  +  + + 
Sbjct: 179 QPGLRGGILGL-GGVGHMGVKIAK-AMGHHVTVISSSNKKREEALQDLGADDYVIGSDQA 236

Query: 207 NIEDLPEKFDVVFDAV 222
            + +L +  D V D V
Sbjct: 237 KMSELADSLDYVIDTV 252

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 77.3 bits (191), Expect = 2e-16
 Identities = 58/227 (25%), Positives = 93/227 (40%), Gaps = 37/227 (16%)

Query: 27  LREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGD 86
              + V I++    +   D  ++   ++   +  P +PG+++ G V  VG QV+K+  GD
Sbjct: 45  PGPNDVKIEIAYCGVCHSDLHQVRSEWA--GTVYPCVPGHEIVGRVVAVGDQVEKYAPGD 102

Query: 87  ---------------------EVY-----GDINEKALDHPKRN-GSLAEYTAVEENLLAL 119
                                E Y     G  N    D P    G  ++   V E    L
Sbjct: 103 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERY-VL 161

Query: 120 K-PKNLSFVEAASLPL--ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
           +       + A + PL  A  T Y  L       GK + V+G  GG+G M I+LA    G
Sbjct: 162 RIRHPQEQLAAVA-PLLCAGITTYSPLRHWQAGPGKKVGVVG-IGGLGHMGIKLAH-AMG 218

Query: 177 ASKVAATSSTAKLDLLRSLGADLAIDYT-KENIEDLPEKFDVVFDAV 222
           A  VA T+S AK +  ++LGAD  ++    + +    + FD + + V
Sbjct: 219 AHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTV 265

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score = 75.6 bits (187), Expect = 6e-16
 Identities = 56/303 (18%), Positives = 108/303 (35%), Gaps = 63/303 (20%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           + A V    G   +  + +  +++   + D+VL+KVVA  +   D       +     PL
Sbjct: 7   IIAAVTPCKG---ADFELQA-LKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV---PL 59

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-----------------------YGDINEKAL 97
           P + G++ +G++E +G  V + +VGD V                       +   N    
Sbjct: 60  PAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGA 119

Query: 98  --DHPKR---------------NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140
             +                     S A Y    EN      K++       L    +T  
Sbjct: 120 DSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGA 179

Query: 141 EG--LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGA 197
            G  +     +   S +   GAG VG   +  AK   GAS  +A     ++L+L + LGA
Sbjct: 180 -GACINALKVTPASSFVTW-GAGAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQLGA 236

Query: 198 DLAIDYTKENI-EDLPEK----FDVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPA 249
              I+   ++    + E      +   ++ G  +   + + A+   G++  ++G      
Sbjct: 237 THVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIA-VVG-APQLG 294

Query: 250 SSF 252
           ++ 
Sbjct: 295 TTA 297

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score = 73.0 bits (180), Expect = 6e-15
 Identities = 55/269 (20%), Positives = 91/269 (33%), Gaps = 52/269 (19%)

Query: 2   KAWVYKEYGNSQSVLKFET----NVEVPS-LREDQVLIKVVAAALNPIDFKRMLGAFSAT 56
           +  V             E      V +P  + E QV ++ +  +++P    RM       
Sbjct: 10  QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTD 69

Query: 57  DSPLP-----TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTA 111
               P      + G  +  + E   S+      GD V                       
Sbjct: 70  YIT-PWQLSQVVDGGGIGIIEE---SKHTNLTKGDFVTS-----------FYWPWQTKVI 114

Query: 112 VEENLLALKPKNLSFVEAASLPLATE---------TAYEGLERSA-FSAGKS--ILVLGG 159
           ++ N L      L         L+           T+  G++     +AG +  ++V G 
Sbjct: 115 LDGNSLEKVDPQL-----VDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGA 169

Query: 160 AGGVGTMVIQLAKHVFGASKV-AATSSTAKLDLLRS-LGADLAIDYTKENIED-----LP 212
           AG  G++  Q+     G S+V     +  K  LL S LG D AI+Y K+N+ +      P
Sbjct: 170 AGACGSVAGQIGH-FLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCP 228

Query: 213 EKFDVVFDAVG--QCDKALKAVKEGGRVV 239
              DV FD VG    D  +  + E   ++
Sbjct: 229 AGVDVYFDNVGGNISDTVISQMNENSHII 257

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score = 72.3 bits (178), Expect = 1e-14
 Identities = 64/291 (21%), Positives = 101/291 (34%), Gaps = 65/291 (22%)

Query: 16  LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKV 75
           L  ET + V   +  +V IK++A+ +   D   +     +     P I G++  GVVE +
Sbjct: 22  LSLET-ITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS---KFPVILGHEAVGVVESI 77

Query: 76  GSQVKKFKVGDEV---------------------------------YGD------INEKA 96
           G+ V   K GD+V                                   D         K 
Sbjct: 78  GAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKP 137

Query: 97  LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGK---- 152
           + +     +  EYT V +  +A         E+  +     T Y G   +A +  K    
Sbjct: 138 IYNLMGTSTFTEYTVVADIAVAKIDPKAPL-ESCLIGCGFATGY-G---AAVNTAKVTPG 192

Query: 153 SILVLGGAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGADLAI---DYTKENI 208
           S   + G GGVG   I   K   GAS+ +   +   K      LGA   +   DY K   
Sbjct: 193 STCAVFGLGGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIY 251

Query: 209 EDLPEK----FDVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPASSF 252
           E + EK     D   +  G+ +    AL++   G  V  ++G +  P    
Sbjct: 252 EVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLG-LASPNERL 301

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score = 71.9 bits (177), Expect = 1e-14
 Identities = 70/285 (24%), Positives = 104/285 (36%), Gaps = 63/285 (22%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
           VEV   +  +V IK+VA  +   D   + G       PLP I G++ AG+VE +G  V  
Sbjct: 26  VEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT---PLPVIAGHEAAGIVESIGEGVTT 82

Query: 82  FKVGDEV---------------------------------YGD------INEKALDHPKR 102
            + GD+V                                   D         K + H   
Sbjct: 83  VRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLG 142

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGK----SILVLG 158
             + ++YT V+E  +A         +   +     T Y G   SA    K    S   + 
Sbjct: 143 TSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY-G---SAVKVAKVTQGSTCAVF 198

Query: 159 GAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGADLAI---DYTKENIEDLPEK 214
           G GGVG  VI   K   GA++ +    +  K    + +GA   +   DY K   E L E 
Sbjct: 199 GLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEM 257

Query: 215 ----FDVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPASSF 252
                D  F+ +G+ D    AL   +E   V  I+G V P + + 
Sbjct: 258 SNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVG-VPPDSQNL 301

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 64/310 (20%), Positives = 103/310 (33%), Gaps = 71/310 (22%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA +  + G+    L  E  +EV   +  +V I+V+A  + P D         A     
Sbjct: 9   CKAAIAWKTGSP---LCIEE-IEVSPPKACEVRIQVIATCVCPTDINATDPKKKA---LF 61

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------------------------- 88
           P + G++ AG+VE VG  V  FK GD+V                                
Sbjct: 62  PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121

Query: 89  -----YGD------INEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATE 137
                  D         +++ H     S ++YT V E  LA      +      +     
Sbjct: 122 IDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFS 181

Query: 138 TAYEGLERSAFSAGK----SILVLGGAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLL 192
           + Y G   +A +  K    S   + G G VG   I   K   GAS+ +A   +  K    
Sbjct: 182 SGY-G---AAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKA 236

Query: 193 RSLGADLAI---DYTKENIEDLPEK----FDVVFDAVGQCD---KALKAVKEGGRVVSII 242
           ++LGA   +   +  K   + + E      D   D  G       A+     G    +++
Sbjct: 237 KALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVV 296

Query: 243 GSVTPPASSF 252
           G       + 
Sbjct: 297 G-AKVDEMTI 305

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score = 71.1 bits (175), Expect = 3e-14
 Identities = 72/293 (24%), Positives = 104/293 (35%), Gaps = 63/293 (21%)

Query: 16  LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKV 75
           L  E  +EV   +  +V IK++A A+   D   + GA    +   P I G+  AG+VE V
Sbjct: 19  LSIEE-IEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP--EGCFPVILGHLGAGIVESV 75

Query: 76  GSQVKKFKVGDEV---------------------------------YGD------INEKA 96
           G  V K K GD V                                   D         K 
Sbjct: 76  GEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKT 135

Query: 97  LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGK---- 152
           + H     + +EYT V +  +A         +   L     T Y G   +A +  K    
Sbjct: 136 ILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY-G---AAVNTAKLEPG 191

Query: 153 SILVLGGAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGADLAI---DYTKENI 208
           S+  + G GGVG  VI   K   GAS+ +    +  K    +  GA   I   D++K   
Sbjct: 192 SVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQ 250

Query: 209 EDLPEK----FDVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPASSFVL 254
           E L E      D  F+ +G       AL+A  +G  V  ++G V         
Sbjct: 251 EVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVG-VAASGEEIAT 302

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 70.7 bits (174), Expect = 4e-14
 Identities = 49/283 (17%), Positives = 95/283 (33%), Gaps = 62/283 (21%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
           +EV     +++ IK++A  +   D   +           P + G++ AG+VE VG  V +
Sbjct: 26  IEVDVPHANEIRIKIIATGVCHTDLYHLFEGKH--KDGFPVVLGHEGAGIVESVGPGVTE 83

Query: 82  FKVGDEV---------------------------------YGD------INEKALDHPKR 102
           F+ G++V                                             + +     
Sbjct: 84  FQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLG 143

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGK----SILVLG 158
             + ++YT V +  +A    +        L     T + G   +A +  K    S   + 
Sbjct: 144 TSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGF-G---AAVNTAKVEPGSTCAVF 199

Query: 159 GAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGADLAI---DYTKENIEDLPEK 214
           G G VG   +       GA + +A   +  K +  +  GA   +   D+++   + L + 
Sbjct: 200 GLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKM 258

Query: 215 ----FDVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPAS 250
                D   + VG       AL++  +G  V  ++G  T    
Sbjct: 259 TNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVG-WTDLHD 300

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 68.7 bits (169), Expect = 2e-13
 Identities = 45/196 (22%), Positives = 76/196 (38%), Gaps = 33/196 (16%)

Query: 57  DSPLPTIPGYDVAGVVEKVGSQV-KKFKVGD---------------------EVY----- 89
           +  +P + G+++ G V K+G +     KVG                      E Y     
Sbjct: 59  NMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFV 118

Query: 90  GDINEKALDHPKRNGSLAEYTAVEENLLALK-PKNLSFVEAASLPLATETAYEGLERSAF 148
              ++   D     G  A Y  V E+   +  P+N+    AA L     T Y  L R+  
Sbjct: 119 TTYSQPYEDGYVSQGGYANYVRVHEHF-VVPIPENIPSHLAAPLLCGGLTVYSPLVRNGC 177

Query: 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAIDYTKE 206
             GK + ++G  GG+G+M   ++K   GA     + S+ K +    +GAD  +A     +
Sbjct: 178 GPGKKVGIVG-LGGIGSMGTLISK-AMGAETYVISRSSRKREDAMKMGADHYIATLEEGD 235

Query: 207 NIEDLPEKFDVVFDAV 222
             E   + FD++    
Sbjct: 236 WGEKYFDTFDLIVVCA 251

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 68.5 bits (168), Expect = 3e-13
 Identities = 65/321 (20%), Positives = 98/321 (30%), Gaps = 102/321 (31%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLRED------QVLIKVVAAA-----LNPIDFKRM 49
            K+ VY    +    L+ ET V  P L  +       V++KVV+        +       
Sbjct: 3   NKSVVYHGTRD----LRVET-VPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYR---- 53

Query: 50  LGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV-----------------YGDI 92
                    P   + G+++ G V + GS V+   +GD V                   D+
Sbjct: 54  ----GRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDV 109

Query: 93  NEKALDHPKRNGSL------------AEYTAV---EENLLALKPKNLSFVEAAS------ 131
            E  L +P  +               AEY  V   +  LL         +E         
Sbjct: 110 CENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKF-GDKEQAMEKIKDLTLIS 168

Query: 132 --LPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK- 188
             LP    T + G   +    G  + +  GAG VG      A+   GA+ V       + 
Sbjct: 169 DILP----TGFHGCVSAGVKPGSHVYIA-GAGPVGRCAAAGARL-LGAACVIVGDQNPER 222

Query: 189 LDLLRSLGADLAIDYTKENIEDLPEKF---------DVVFDAVG-QCDK----------- 227
           L LL   G +  ID        L ++          D   DAVG +              
Sbjct: 223 LKLLSDAGFE-TIDLRNS--APLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPN 279

Query: 228 -----ALKAVKEGGRVVSIIG 243
                    V+ GG  + I G
Sbjct: 280 GALNSLFDVVRAGGA-IGIPG 299

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 66.1 bits (162), Expect = 1e-12
 Identities = 57/323 (17%), Positives = 101/323 (31%), Gaps = 105/323 (32%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLRE-------DQVLIKVVAAA-----LNPIDFKR 48
            +  VY   G     ++ +  ++ P +++         V++KVV+        + +    
Sbjct: 3   NRGVVYLGSGK----VEVQK-IDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVR--- 54

Query: 49  MLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------------- 88
                  T + +  + G+++ G V + G  V+  ++GD V                    
Sbjct: 55  -----GRTTAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTG 109

Query: 89  -------------YGDINEKALDHPKRNGSLAEYTAV---EENLLALKPKNLS--FVEAA 130
                        YG ++          G  AEY  V   + NLL L P           
Sbjct: 110 VCLTVNPARAGGAYGYVDMGDWT-----GGQAEYVLVPYADFNLLKL-PDRDKAMEKIRD 163

Query: 131 SLPLA--TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188
              L+    T Y G   +    G ++ V  GAG VG      A+   GA+ V        
Sbjct: 164 LTCLSDILPTGYHGAVTAGVGPGSTVYVA-GAGPVGLAAAASARL-LGAAVVIVGDLNPA 221

Query: 189 -LDLLRSLGADLAIDYTKENIEDLPEKF---------DVVFDAVG------------QCD 226
            L   ++ G +   D + +    L E+          D   DAVG               
Sbjct: 222 RLAHAKAQGFE-IADLSLD--TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEA 278

Query: 227 K------ALKAVKEGGRVVSIIG 243
                   ++  +  G+ + I G
Sbjct: 279 PATVLNSLMQVTRVAGK-IGIPG 300

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} Length = 243

 Score = 50.2 bits (120), Expect = 2e-07
 Identities = 33/149 (22%), Positives = 52/149 (34%), Gaps = 22/149 (14%)

Query: 150 AGKSILVLG-GAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKEN 207
            G  I+ LG G G          +H  GAS V     S   L   R+ G D  I Y + +
Sbjct: 43  GGLRIVDLGCGFGWFC---RWAHEH--GASYVLGLDLSEKMLARARAAGPDTGITYERAD 97

Query: 208 IEDLP---EKFDVVF---------DAVGQCDKALKAVKEGGRVVSII---GSVTPPASSF 252
           ++ L    + FD+ +         D         +A+  GG  V        + P    +
Sbjct: 98  LDKLHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGW 157

Query: 253 VLTSDGSILEKLNPYFESGKVKAIIDPKG 281
            + ++G     ++ Y   G  K     KG
Sbjct: 158 AIDAEGRRTWPIDRYLVEGPRKTDWLAKG 186

>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} Length = 276

 Score = 43.0 bits (101), Expect = 5e-05
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-- 200
              + +  G  +L  G   G+G   + LAK+   A   +   S   L+  R         
Sbjct: 30  HHDTVYPPGAKVLEAGC--GIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK 87

Query: 201 -IDYTKENIEDLP---EKFDVVFDA-----VGQCDKALK----AVKEGGRVV 239
            + + + NI  LP     FD +F       +   ++ALK     +K GG + 
Sbjct: 88  NVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTIT 139

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 25/112 (22%), Positives = 39/112 (34%), Gaps = 19/112 (16%)

Query: 154 ILVLGGAGGVGTMVI-QLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKENIEDL 211
           I + G  G +G  VI  L K V  +  VA   + AK   L + G  +   DY   +   L
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYG--DEAAL 59

Query: 212 PEKF---DVVF--------DAVGQCDKALKAVKEGG--RVV--SIIGSVTPP 248
                  + +             Q    + A K  G   +   S++ + T P
Sbjct: 60  TSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSP 111

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str} Length = 253

 Score = 42.2 bits (99), Expect = 7e-05
 Identities = 31/140 (22%), Positives = 49/140 (35%), Gaps = 21/140 (15%)

Query: 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENI 208
             K++L LG   G G   I  A+H  GA KV     S   L   +       + Y ++ I
Sbjct: 44  NQKTVLDLGC--GFGWHCIYAAEH--GAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAI 99

Query: 209 EDLP---EKFDVVF--DAVGQC---DKALKAV----KEGGRVVSII---GSVTPPASSFV 253
           ED+    + ++VV    A+      D   K V    K  G  +  +            + 
Sbjct: 100 EDIAIEPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWY 159

Query: 254 LTSDGSILE-KLNPYFESGK 272
               G+ L   ++ YF    
Sbjct: 160 TDETGNKLHWPVDRYFNESM 179

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 8e-05
 Identities = 41/302 (13%), Positives = 82/302 (27%), Gaps = 95/302 (31%)

Query: 4   WVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTI 63
           W          V KF                  V   L   ++K ++             
Sbjct: 69  WTLLSKQEEM-VQKF------------------VEEVLRI-NYKFLMSPIKTE----QRQ 104

Query: 64  PGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAE-YTAVEENLLALKPK 122
           P       +E+           D +Y D N+      K N S  + Y  + + LL L+P 
Sbjct: 105 PSMMTRMYIEQR----------DRLYND-NQV---FAKYNVSRLQPYLKLRQALLELRPA 150

Query: 123 NLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA 182
               ++             G+      +GK+ + L           ++   +F  +    
Sbjct: 151 KNVLID-------------GV----LGSGKTWVALDVCLSYKV-QCKMDFKIFWLNLKNC 192

Query: 183 TSSTAKLDLLRSLGADLAIDYT---------KENIEDLPEKFD------------VVFDA 221
            S    L++L+ L   +  ++T         K  I  +  +              +V   
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 222 VGQCD-KALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPK 280
           V   + KA  A     +++             + T    + + L+    +  +       
Sbjct: 253 V--QNAKAWNAFNLSCKIL-------------LTTRFKQVTDFLSAATTT-HISLDHHSM 296

Query: 281 GL 282
            L
Sbjct: 297 TL 298

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 42.3 bits (100), Expect = 9e-05
 Identities = 24/116 (20%), Positives = 39/116 (33%), Gaps = 21/116 (18%)

Query: 153 SILVLGGAGGVGTMVI-QLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKENIED 210
           SI V G  G +G +VI  L K V  +  +A   +  K   L   G ++   DY     E 
Sbjct: 2   SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYN--QPES 59

Query: 211 LPEKF---DVVF----------DAVGQCDKALKAVKEGG--RVV--SIIGSVTPPA 249
           L + F     +             + Q    +KA ++ G   +       +     
Sbjct: 60  LQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESII 115

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 15/111 (13%)

Query: 149 SAGKSILVLGGAGGVGTMVIQ-LAKH-------VFGASKVAATSSTAKLDLLRSLGADLA 200
            +   IL++G  G +G  V +            V  ++  + +     L+  ++ GA++ 
Sbjct: 2   GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 61

Query: 201 I-DYT-KENIEDLPEKFDVVFDAVGQCD-----KALKAVKEGGRVVSIIGS 244
                   ++ +  +  DVV   VG          +KA+KE G V     S
Sbjct: 62  HGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPS 112

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	284
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.96
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.85
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.8
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.48
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.42
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.39
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.33
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.26
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.26
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.23
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.08
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.03
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.03
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.97
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.83
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.73
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.72
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.71
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.68
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.65
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.63
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.63
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.62
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.61
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.6
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.56
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.53
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.47
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.45
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.42
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	97.41
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.4
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.38
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.38
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.37
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.36
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.28
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.27
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.27
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	97.26
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.22
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.2
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.2
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.2
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.2
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.18
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	97.13
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.11
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.1
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.09
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	97.08
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.07
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.06
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	97.06
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.04
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.04
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	97.03
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	97.03
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.03
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.02
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.01
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.01
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	97.01
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	97.01
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	97.0
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.99
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.98
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.95
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.95
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.95
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.95
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.93
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.92
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	96.91
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.91
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.89
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.89
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.88
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.87
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.87
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.85
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.85
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.85
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.84
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.84
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.84
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.83
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.83
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.83
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.82
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.82
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.8
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.8
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.8
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.8
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.79
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.79
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.79
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.77
1xxl_A	239	YCGJ protein; structural genomics, protein structu	96.77
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.77
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.77
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.76
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.76
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.76
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	96.76
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	96.75
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.75
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.75
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.75
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.75
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.75
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	96.75
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.74
2b25_A	336	Hypothetical protein; structural genomics, methyl	96.74
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.74
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.74
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.74
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.73
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.73
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.73
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.73
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.72
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.72
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.72
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.71
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.71
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.71
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	96.71
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.7
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.7
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.67
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.67
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.66
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.66
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.66
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	96.66
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.66
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.66
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	96.65
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.65
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.65
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.65
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.65
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.65
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.65
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.65
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.64
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.64
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.64
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.63
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.62
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.61
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.61
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.61
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.61
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.61
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	96.6
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.59
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.59
3f4k_A	257	Putative methyltransferase; structural genomics, P	96.58
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.57
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.57
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.57
4hg2_A	257	Methyltransferase type 11; structural genomics, PS	96.57
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.57
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.57
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.57
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.56
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.55
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.55
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.55
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.54
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.54
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.54
2kw5_A	202	SLR1183 protein; structural genomics, northeast st	96.54
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.53
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	96.53
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.53
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.53
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.52
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.52
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.51
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.51
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.5
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.5
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	96.48
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.47
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.47
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.46
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.46
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.45
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.45
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.45
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.44
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.44
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.44
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.44
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	96.44
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	96.44
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	96.42
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.41
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.41
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.41
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.41
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.4
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	96.4
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.38
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.38
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	96.38
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.37
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.37
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.37
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.36
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.36
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.35
1spx_A	278	Short-chain reductase family member (5L265); paral	96.35
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.35
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.34
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.32
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.32
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.32
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	96.31
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.31
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.31
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.31
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.31
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.31
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	96.31
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.3
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	96.29
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.29
2ipx_A	233	RRNA 2'-O-methyltransferase fibrillarin; FBL, stru	96.29
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.28
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.27
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.27
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	96.27
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.27
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.27
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.26
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.26
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.26
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	96.25
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.25
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	96.24
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.24
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	96.24
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	96.24
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.24
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.23
3dh0_A	219	SAM dependent methyltransferase; cystal structure,	96.23
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.23
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	96.23
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	96.22
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.21
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.21
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	96.21
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.21
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	96.21
3i9f_A	170	Putative type 11 methyltransferase; structural gen	96.2
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	96.2
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.2
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.19
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.17
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.17
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.17
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.15
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	96.14
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.14
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.12
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.11
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.1
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.09
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.09
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.09
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.08
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.08
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	96.07
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.06
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	96.06
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.06
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	96.05
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.04
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.03
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.02
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.01
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.01
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	96.0
3dlc_A	219	Putative S-adenosyl-L-methionine-dependent methylt	96.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.99
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.99
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	95.99
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.99
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.99
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.98
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.95
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	95.93
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.93
3g5t_A	299	Trans-aconitate 3-methyltransferase; structural ge	95.91
1xdz_A	240	Methyltransferase GIDB; MCSG, protein structure in	95.9
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.9
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	95.9
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.89
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.89
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	95.88
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.87
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.85
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	95.85
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	95.84
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	95.84
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.84
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.84
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.84
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	95.83
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.83
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.83
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	95.81
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	95.81
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.81
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	95.8
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	95.8
3l8d_A	242	Methyltransferase; structural genomics, PSI, nysgr	95.8
3id6_C	232	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	95.79
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	95.79
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.79
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.78
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	95.75
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.74
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	95.72
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	95.72
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	95.71
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.71
3cgg_A	195	SAM-dependent methyltransferase; NP_600671.1, meth	95.71
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	95.66
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	95.64
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	95.64
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	95.64
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	95.63
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	95.63
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	95.62
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.62
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	95.6
3mgg_A	276	Methyltransferase; NYSGXRC, PSI-II, protein struct	95.58
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	95.58
2xvm_A	199	Tellurite resistance protein TEHB; antibiotic resi	95.56
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.54
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.53
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.52
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	95.51
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	95.5
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.49
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	95.48
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.48
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.46
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.46
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	95.43
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	95.43
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.43
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.43
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	95.42
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	95.42
2yxl_A	450	PH0851 protein, 450AA long hypothetical FMU protei	95.42
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.41
2avn_A	260	Ubiquinone/menaquinone biosynthesis methyltransfe	95.41
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	95.4
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	95.4
4fsd_A	383	Arsenic methyltransferase; rossmann fold; 1.75A {C	95.39
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	95.36
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	95.36
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	95.33
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	95.29
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.29
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	95.29
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	95.28
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	95.26
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.25
3ege_A	261	Putative methyltransferase from antibiotic biosyn	95.23
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.22
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	95.2
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	95.19
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	95.19
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.19
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.16
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.15
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	95.14
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	95.13
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.13
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	95.13
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	95.12
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	95.1
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.1
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.09
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	95.07
3ccf_A	279	Cyclopropane-fatty-acyl-phospholipid synthase; YP_	95.07
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.05
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.04
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	95.04
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	95.03
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.02
2p8j_A	209	S-adenosylmethionine-dependent methyltransferase;	95.02
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.02
1sqg_A	429	SUN protein, FMU protein; rossmann-fold, mixed bet	95.01
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	95.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	95.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	94.98
4f6c_A	427	AUSA reductase domain protein; thioester reductase	94.96
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	94.95
3dtn_A	234	Putative methyltransferase MM_2633; structural gen	94.93
1id1_A	153	Putative potassium channel protein; RCK domain, E.	94.92
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	94.9
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	94.9
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	94.9
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	94.89
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	94.88
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	94.86
1yzh_A	214	TRNA (guanine-N(7)-)-methyltransferase; alpha-beta	94.86
2ex4_A	241	Adrenal gland protein AD-003; methyltransferase, s	94.85
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	94.83
1ve3_A	227	Hypothetical protein PH0226; dimer, riken structur	94.83
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	94.82
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	94.79
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	94.77
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	94.75
4htf_A	285	S-adenosylmethionine-dependent methyltransferase;	94.74
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	94.73
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	94.72
3m70_A	286	Tellurite resistance protein TEHB homolog; structu	94.7
1xtp_A	254	LMAJ004091AAA; SGPP, structural genomics, PSI, pro	94.7
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	94.69
3h2b_A	203	SAM-dependent methyltransferase; alpha-beta protei	94.67
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	94.63

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=1.3e-47  Score=336.33  Aligned_cols=274  Identities=33%  Similarity=0.501  Sum_probs=237.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCC--CCC-CCCCCCcccccceeEEEEEeCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGA--FSA-TDSPLPTIPGYDVAGVVEKVGS   77 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~--~~~-~~~~~p~~~G~e~~G~V~~vG~   77 (284)
                      |||+++.++|.+ +.++++ +.|.|+|++|||+|||.+++||++|++.+.|.  ++. ....+|.++|||++|+|+++|+
T Consensus         7 Mka~~~~~~g~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~   84 (321)
T 3tqh_A            7 MKAIQFDQFGPP-KVLKLV-DTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGS   84 (321)
T ss_dssp             EEEEEESSSCSG-GGEEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECT
T ss_pred             ceEEEEccCCCc-ceeEEE-ecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCC
Confidence            899999999987 778999 88999999999999999999999999999882  110 1346789999999999999999


Q ss_pred             CCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEE
Q 023273           78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVL  157 (284)
Q Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~  157 (284)
                      ++++|++||||++..+.     ...+|+|++|+++|.+.++++|++++++++|+++++++|||++++.+++++|++|+|+
T Consensus        85 ~v~~~~~GdrV~~~~~~-----~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~  159 (321)
T 3tqh_A           85 DVNNVNIGDKVMGIAGF-----PDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIH  159 (321)
T ss_dssp             TCCSCCTTCEEEEECST-----TTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEES
T ss_pred             CCCCCCCCCEEEEccCC-----CCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEE
Confidence            99999999999987531     1346999999999999999999999999999999999999999988999999999999


Q ss_pred             cCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc-cccCCCcccEEEeCCCC--cHHHHHhhcc
Q 023273          158 GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IEDLPEKFDVVFDAVGQ--CDKALKAVKE  234 (284)
Q Consensus       158 ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~d~vid~~g~--~~~~~~~l~~  234 (284)
                      |++|++|++++++|+.+ |++|++++ ++++.+.++++|+++++|++..+ +.+..+++|++|||+|+  ...++++|++
T Consensus       160 Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~~~~~~~~~~l~~  237 (321)
T 3tqh_A          160 AGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQSIDCLKE  237 (321)
T ss_dssp             STTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCHHHHHHHGGGEEE
T ss_pred             cCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCcHHHHHHHHhccC
Confidence            99999999999999996 99998887 56678999999999999988766 66656899999999995  4889999999


Q ss_pred             CCEEEEEcCCCCC--------CceeEE---EeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          235 GGRVVSIIGSVTP--------PASSFV---LTSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       235 ~G~~v~~g~~~~~--------~~~~~~---~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +|+++.+|....+        ..+.+.   .....++++++++++++|++++.|+++|||
T Consensus       238 ~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l  297 (321)
T 3tqh_A          238 TGCIVSVPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIEISRIFQL  297 (321)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTCEEECCCCCCCHHHHHHHHHHHHTTSSCCCEEEEECG
T ss_pred             CCEEEEeCCCCchhhhhhhhhcceEEEEEecCCCHHHHHHHHHHHHCCCcccccccEEcH
Confidence            9999999865421        112222   224578999999999999999999999986

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=1e-46  Score=336.02  Aligned_cols=277  Identities=29%  Similarity=0.399  Sum_probs=236.1

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++++++ + +.++++ +.|.|+|++|||+|||.+++||++|++.+.|.++. ..++|.++|||++|+|+++|++++
T Consensus        28 mkA~~~~~~~-~-~~l~~~-e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~P~v~GhE~~G~V~~vG~~v~  103 (363)
T 3uog_A           28 MQEWSTETVA-P-HDLKLA-ERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGL-DLAFPFVPASDMSGVVEAVGKSVT  103 (363)
T ss_dssp             EEEEEBSCTT-T-TCCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTC-CCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             hEEEEEccCC-C-CCcEEE-eeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCCcCcccceEEEEEEECCCCC
Confidence            8999999874 2 448999 89999999999999999999999999999987642 346789999999999999999999


Q ss_pred             CCCCCCEEEEecCcc--------------cc-CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-H
Q 023273           81 KFKVGDEVYGDINEK--------------AL-DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-E  144 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~--------------~~-~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~  144 (284)
                      +|++||||++.+...              .. .+...+|+|+||+++|++.++++|++++++++|+++++++|||+++ +
T Consensus       104 ~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~  183 (363)
T 3uog_A          104 RFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVE  183 (363)
T ss_dssp             SCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHHHHTT
T ss_pred             CCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHHHHHH
Confidence            999999999873210              00 2334579999999999999999999999999999999999999999 6


Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEE
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVV  218 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~v  218 (284)
                      .+++++|++|||+| +|++|++++++|+.+ |++|++++++++|++.++++|++.++|++..++.+.      ++++|++
T Consensus       184 ~~~~~~g~~VlV~G-~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~v  261 (363)
T 3uog_A          184 KGHLRAGDRVVVQG-TGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHI  261 (363)
T ss_dssp             TTCCCTTCEEEEES-SBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred             hcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEE
Confidence            89999999999999 899999999999995 999999999999999999999999998543443321      3489999


Q ss_pred             EeCCCC--cHHHHHhhccCCEEEEEcCCCCC-C----------ceeEE--EeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          219 FDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-P----------ASSFV--LTSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       219 id~~g~--~~~~~~~l~~~G~~v~~g~~~~~-~----------~~~~~--~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      |||+|.  ...++++|+++|+++.+|..... .          .+.+.  .....++++++++++++|++++.|+++|||
T Consensus       262 id~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l  341 (363)
T 3uog_A          262 LEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLGLKPVIDMRYKF  341 (363)
T ss_dssp             EEETTSSCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHHHHHHHHHHHHTCCCCEEEEEEG
T ss_pred             EECCChHHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHHHHHHHHHHcCCCccceeeEEcH
Confidence            999995  58999999999999999876431 1          11111  123578999999999999999999999986

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=2.3e-46  Score=331.57  Aligned_cols=276  Identities=27%  Similarity=0.293  Sum_probs=234.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++++++++   ++++ +.|.|+|++|||+|||.+++||++|++.+.|.++..+.++|.++|||++|+|+++|++++
T Consensus         1 MkA~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~   76 (345)
T 3jv7_A            1 MKAVQYTEIGSE---PVVV-DIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVT   76 (345)
T ss_dssp             CEEEEECSTTSC---CEEE-ECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCC
T ss_pred             CeEEEEcCCCCc---eEEE-EecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCC
Confidence            999999999986   7998 899999999999999999999999999999976544567899999999999999999999


Q ss_pred             CCCCCCEEEEecCccc-----------------------cCCCCCCCceeeEEeee-cCceeeCCCCCCHHhhhcccchH
Q 023273           81 KFKVGDEVYGDINEKA-----------------------LDHPKRNGSLAEYTAVE-ENLLALKPKNLSFVEAASLPLAT  136 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~-----------------------~~~~~~~g~~~~~~~~~-~~~~~~ip~~~~~~~aa~~~~~~  136 (284)
                      +|++||||++.+....                       ..+...+|+|+||+++| ++.++++|+ ++++++|.+++++
T Consensus        77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~  155 (345)
T 3jv7_A           77 GFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAG  155 (345)
T ss_dssp             SCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTT
T ss_pred             CCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhH
Confidence            9999999998642100                       02334579999999999 999999999 9999999999999


Q ss_pred             HHHHHHHHhc--ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC---
Q 023273          137 ETAYEGLERS--AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL---  211 (284)
Q Consensus       137 ~ta~~al~~~--~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---  211 (284)
                      +|||+++...  ++++|++|+|+|+ |++|++++|+|+.+++.+|++++++++|++.++++|++.+++++.+.....   
T Consensus       156 ~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~  234 (345)
T 3jv7_A          156 LTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIREL  234 (345)
T ss_dssp             HHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHH
T ss_pred             HHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHH
Confidence            9999999764  8999999999995 999999999999965789999999999999999999999998865322221   


Q ss_pred             --CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCC-CCcee---------E--EEeccHHHHHHHHHHHHCCCee
Q 023273          212 --PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT-PPASS---------F--VLTSDGSILEKLNPYFESGKVK  274 (284)
Q Consensus       212 --~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~-~~~~~---------~--~~~~~~~~~~~~~~~~~~g~i~  274 (284)
                        ++++|++||++|+   .+.++++|+++|+++.+|.... +..++         +  ......++++++++++++|+++
T Consensus       235 t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~  314 (345)
T 3jv7_A          235 TGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSELMEVVALARAGRLD  314 (345)
T ss_dssp             HGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEESTTTSCTTCEEECCCSCCHHHHHHHHHHHHTTCCC
T ss_pred             hCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCc
Confidence              3489999999996   4789999999999999987643 21111         1  1123568999999999999999


Q ss_pred             EeecccccC
Q 023273          275 AIIDPKGLL  283 (284)
Q Consensus       275 ~~i~~~~~~  283 (284)
                      + ++++|||
T Consensus       315 ~-~~~~~~l  322 (345)
T 3jv7_A          315 I-HTETFTL  322 (345)
T ss_dssp             C-CEEEECS
T ss_pred             e-EEEEEcH
Confidence            8 4588886

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=2e-46  Score=329.38  Aligned_cols=270  Identities=31%  Similarity=0.373  Sum_probs=235.2

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||++++++|.+ +.++++ +.+.|+|++|||+|||.+++||++|++.+.|.++.  .++|.++|||++|+|+++|++++
T Consensus         2 MkA~~~~~~g~~-~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~p~v~G~e~~G~V~~vG~~v~   77 (325)
T 3jyn_A            2 AKRIQFSTVGGP-EVLEYV-DFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA--PFLPSGLGAEGAGVVEAVGDEVT   77 (325)
T ss_dssp             EEEEEBSSCSSG-GGCEEE-EECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--SSSSBCCCCCEEEEEEEECTTCC
T ss_pred             cEEEEEecCCCc-ceeEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCceeEEEEEEECCCCC
Confidence            899999999988 778999 88999999999999999999999999999998753  36789999999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~ga  159 (284)
                      +|++||||++..        ..+|+|++|+++|++.++++|++++++++|++++.++|+|+++. .+++++|++|+|+|+
T Consensus        78 ~~~~GdrV~~~~--------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga  149 (325)
T 3jyn_A           78 RFKVGDRVAYGT--------GPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAA  149 (325)
T ss_dssp             SCCTTCEEEESS--------SSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             CCCCCCEEEEec--------CCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            999999998864        23799999999999999999999999999999999999999984 689999999999999


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC--cHHHHHh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKA  231 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~--~~~~~~~  231 (284)
                      +|++|++++++|+.. |++|+++++++++++.++++|++.+++++..++.+.      ++++|++|||+|.  ...++++
T Consensus       150 ~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~  228 (325)
T 3jyn_A          150 AGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDS  228 (325)
T ss_dssp             TSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCGGGHHHHHTT
T ss_pred             CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCChHHHHHHHHH
Confidence            999999999999996 999999999999999999999999999876554331      3589999999996  5889999


Q ss_pred             hccCCEEEEEcCCCCCC------------ceeEEE------ecc----HHHHHHHHHHHHCCCeeEeecccccC
Q 023273          232 VKEGGRVVSIIGSVTPP------------ASSFVL------TSD----GSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       232 l~~~G~~v~~g~~~~~~------------~~~~~~------~~~----~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      |+++|+++.+|....+.            .+.+..      ...    .+.++++++++++|++++.|+++|||
T Consensus       229 l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l  302 (325)
T 3jyn_A          229 VAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVDGIEQYAL  302 (325)
T ss_dssp             EEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCCCCEEEEG
T ss_pred             hcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCccccEEcH
Confidence            99999999998764321            111111      011    24456899999999999999999986

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=1.5e-46  Score=333.61  Aligned_cols=270  Identities=27%  Similarity=0.439  Sum_probs=235.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.++|.+ +.++++ +.|.|+|++|||+|||.+++||++|++.+.|.++. +..+|.++|||++|+|+++|++++
T Consensus        29 MkA~~~~~~g~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~i~G~E~~G~V~~vG~~v~  105 (353)
T 4dup_A           29 MRFVDLKSFGGP-DVMVIG-KRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP-PKDASPILGLELSGEIVGVGPGVS  105 (353)
T ss_dssp             EEEEEESSSSSG-GGEEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCC-CTTSCSSSCCEEEEEEEEECTTCC
T ss_pred             eeEEEEccCCCc-cceEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCCccccccEEEEEEECCCCC
Confidence            899999999987 779999 89999999999999999999999999999998753 235689999999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga  159 (284)
                      +|++||||++...         +|+|++|+++|++.++++|++++++++|+++++++|||+++ +.+++++|++|+|+|+
T Consensus       106 ~~~vGdrV~~~~~---------~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg  176 (353)
T 4dup_A          106 GYAVGDKVCGLAN---------GGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGG  176 (353)
T ss_dssp             SCCTTCEEEEECS---------SCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESST
T ss_pred             CCCCCCEEEEecC---------CCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            9999999998753         69999999999999999999999999999999999999999 6799999999999998


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC-----CCcccEEEeCCCC--cHHHHHhh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAVGQ--CDKALKAV  232 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~d~vid~~g~--~~~~~~~l  232 (284)
                      +|++|++++++|+.. |++|+++++++++++.++++|++.+++++..++.+.     .+++|++|||+|+  ...++++|
T Consensus       177 ~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l  255 (353)
T 4dup_A          177 TSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAAYFERNIASL  255 (353)
T ss_dssp             TSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCGGGHHHHHHTE
T ss_pred             CCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCHHHHHHHHHHh
Confidence            999999999999995 999999999999999999999999999876553332     4689999999996  58899999


Q ss_pred             ccCCEEEEEcCCCCCCc--ee----------EEEe---c-c--------HHHHHHHHHHHHCCCeeEeecccccC
Q 023273          233 KEGGRVVSIIGSVTPPA--SS----------FVLT---S-D--------GSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       233 ~~~G~~v~~g~~~~~~~--~~----------~~~~---~-~--------~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +++|+++.+|.......  ++          +...   . .        .+.++++++++++|++++.|+++|||
T Consensus       256 ~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l  330 (353)
T 4dup_A          256 AKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAF  330 (353)
T ss_dssp             EEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEEEEEEG
T ss_pred             ccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcceEEeH
Confidence            99999999987643211  11          1111   0 1        11278899999999999999999986

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=1e-46  Score=329.78  Aligned_cols=264  Identities=25%  Similarity=0.416  Sum_probs=222.9

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++++  .+ +.++++ +.|.|+|++|||+|||.+++||++|++.+.|.++  ..++|.++|||++|+|+++|++++
T Consensus         5 Mka~~~~~--~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~p~i~G~e~~G~V~~vG~~v~   78 (315)
T 3goh_A            5 HQVWAYQT--KT-HSVTLN-SVDIPALAADDILVQNQAIGINPVDWKFIKANPI--NWSNGHVPGVDGAGVIVKVGAKVD   78 (315)
T ss_dssp             EEEEEEET--TT-TEEEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTT--CCCTTCCCCSEEEEEEEEECTTSC
T ss_pred             eEEEEEeC--CC-CeeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCC--cCCCCCEeeeeeEEEEEEeCCCCC
Confidence            89999996  22 347998 8999999999999999999999999999998764  236789999999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA  160 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~  160 (284)
                      +|++||||++..+      ...+|+|+||+++|++.++++|++++++++|+++++++|||++++.+++++|++|||+|+ 
T Consensus        79 ~~~vGdrV~~~~~------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~Ga-  151 (315)
T 3goh_A           79 SKMLGRRVAYHTS------LKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGF-  151 (315)
T ss_dssp             GGGTTCEEEEECC------TTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECC-
T ss_pred             CCCCCCEEEEeCC------CCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECC-
Confidence            9999999999763      234799999999999999999999999999999999999999998899999999999997 


Q ss_pred             chHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC--cHHHHHhhccCCEE
Q 023273          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CDKALKAVKEGGRV  238 (284)
Q Consensus       161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~l~~~G~~  238 (284)
                      |++|++++|+|+.+ |++|++++ +++|.++++++|++++++   + ....++++|++|||+|+  ...++++|+++|++
T Consensus       152 G~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~lGa~~v~~---d-~~~v~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~  225 (315)
T 3goh_A          152 GAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKRGVRHLYR---E-PSQVTQKYFAIFDAVNSQNAAALVPSLKANGHI  225 (315)
T ss_dssp             SHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHHTEEEEES---S-GGGCCSCEEEEECC-------TTGGGEEEEEEE
T ss_pred             CHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHcCCCEEEc---C-HHHhCCCccEEEECCCchhHHHHHHHhcCCCEE
Confidence            99999999999996 89999999 999999999999998884   2 34447899999999995  47889999999999


Q ss_pred             EEEcCCCCCC-------ceeEEE---e-----cc-------HHHHHHHHHHHHCCCeeEeecccccC
Q 023273          239 VSIIGSVTPP-------ASSFVL---T-----SD-------GSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       239 v~~g~~~~~~-------~~~~~~---~-----~~-------~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +.++......       .+.+..   .     ..       .+.++++++++++|++++.|+++|||
T Consensus       226 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l  292 (315)
T 3goh_A          226 ICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRF  292 (315)
T ss_dssp             EEECCC----------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEEEG
T ss_pred             EEEeCCCCccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccccceEecH
Confidence            9997653211       111110   0     11       23578999999999999999999986

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=6e-46  Score=329.23  Aligned_cols=275  Identities=25%  Similarity=0.337  Sum_probs=233.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++...++  ..++++ +.|.|+|+||||+|||.++|||++|++.++|.++   .++|.++|||++|+|+++|++++
T Consensus         1 MKA~v~~~~~~--~~~~l~-e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~---~~~p~i~GhE~aG~V~~vG~~V~   74 (348)
T 4eez_A            1 MKAAVVRHNPD--GYADLV-EKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG---NKAGTVLGHEGIGIVKEIGADVS   74 (348)
T ss_dssp             CEEEEECSSCC--SSEEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC---CCTTCBCCSEEEEEEEEECTTCC
T ss_pred             CeEEEEEcCCC--CcEEEE-EeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC---CCCCcccceeEEEEEEEECceee
Confidence            99999975443  237998 8999999999999999999999999999999764   46789999999999999999999


Q ss_pred             CCCCCCEEEEecCc-------------------cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           81 KFKVGDEVYGDINE-------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~-------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      +|++||||+..+..                   ....+...+|+|++|+++|++.++++|++++++++++++++++|||+
T Consensus        75 ~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  154 (348)
T 4eez_A           75 SLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYK  154 (348)
T ss_dssp             SCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHH
T ss_pred             ecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEe
Confidence            99999999765321                   01123456799999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKF  215 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~  215 (284)
                      +++..++++|++|+|+| +|++|.+++++++.+++.+|++++++++|++.++++|++.++|+++.++.+.      +.++
T Consensus       155 ~l~~~~~~~g~~VlV~G-aG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~  233 (348)
T 4eez_A          155 AIKVSGVKPGDWQVIFG-AGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGV  233 (348)
T ss_dssp             HHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCE
T ss_pred             eecccCCCCCCEEEEEc-CCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCc
Confidence            99989999999999999 6999999999998766899999999999999999999999999876654332      4589


Q ss_pred             cEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCce----------eE--EEeccHHHHHHHHHHHHCCCeeEeeccc
Q 023273          216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SF--VLTSDGSILEKLNPYFESGKVKAIIDPK  280 (284)
Q Consensus       216 d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~g~i~~~i~~~  280 (284)
                      |++++++++   ...++++++++|+++.+|.+.....+          ++  ++...+++++++++++++|+|+|.+ ++
T Consensus       234 d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i~p~~-~~  312 (348)
T 4eez_A          234 QSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVKPIV-AT  312 (348)
T ss_dssp             EEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSCCCCE-EE
T ss_pred             eEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCCEEEE-EE
Confidence            999999886   47899999999999999876533221          11  2234678999999999999999876 67


Q ss_pred             ccC
Q 023273          281 GLL  283 (284)
Q Consensus       281 ~~~  283 (284)
                      |||
T Consensus       313 ~~l  315 (348)
T 4eez_A          313 RKL  315 (348)
T ss_dssp             ECG
T ss_pred             EeH
Confidence            886

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=2.6e-46  Score=330.62  Aligned_cols=271  Identities=21%  Similarity=0.339  Sum_probs=235.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++.++|++.+.++++ +.|.|+|++|||+|||.+++||++|++.+.|.++. ..++|.++|||++|+|+++|++++
T Consensus         5 mka~~~~~~g~p~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~i~G~E~~G~V~~vG~~v~   82 (340)
T 3gms_A            5 GKLIQFHKFGNPKDVLQVE-YKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAH-RIPLPNIPGYEGVGIVENVGAFVS   82 (340)
T ss_dssp             EEEEEESSCSCHHHHEEEE-EEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTT-TSCSSBCCCSCCEEEEEEECTTSC
T ss_pred             cEEEEEecCCCchheEEEE-ecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCC-CCCCCCcCCcceEEEEEEeCCCCC
Confidence            7999999999874568998 89999999999999999999999999999997643 246789999999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga  159 (284)
                      +|++||||+++..         +|+|++|+++|++.++++|++++++++|++++.++|||+++ +.+++++|++|+|+|+
T Consensus        83 ~~~vGdrV~~~~~---------~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga  153 (340)
T 3gms_A           83 RELIGKRVLPLRG---------EGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNAC  153 (340)
T ss_dssp             GGGTTCEEEECSS---------SCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             CCCCCCEEEecCC---------CccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCC
Confidence            9999999998642         79999999999999999999999999999999999999998 6799999999999998


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC--cHHHHHh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKA  231 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~--~~~~~~~  231 (284)
                      +|++|++++++|+.. |++|+++++++++++.++++|++.+++++..++.+.      ++++|++|||+|+  ...++++
T Consensus       154 ~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~  232 (340)
T 3gms_A          154 GSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFS  232 (340)
T ss_dssp             TSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCHHHHHHHHHT
T ss_pred             ccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCChhHHHHHHH
Confidence            889999999999996 999999999999999999999999999876554331      3589999999996  3667799


Q ss_pred             hccCCEEEEEcCCCCC----------CceeEEEe------------ccHHHHHHHHHHHHCCCeeE-eecccccC
Q 023273          232 VKEGGRVVSIIGSVTP----------PASSFVLT------------SDGSILEKLNPYFESGKVKA-IIDPKGLL  283 (284)
Q Consensus       232 l~~~G~~v~~g~~~~~----------~~~~~~~~------------~~~~~~~~~~~~~~~g~i~~-~i~~~~~~  283 (284)
                      |+++|+++.+|.....          ..+.+...            ...++++++++++++|++++ .|+++|||
T Consensus       233 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~i~~~~~l  307 (340)
T 3gms_A          233 LRPNGHFLTIGLLSGIQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYEL  307 (340)
T ss_dssp             EEEEEEEEECCCTTSCCCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEEG
T ss_pred             hcCCCEEEEEeecCCCCCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccccccEEEeH
Confidence            9999999999875421          12222211            12468999999999999998 58899986

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=6.7e-46  Score=328.28  Aligned_cols=271  Identities=35%  Similarity=0.544  Sum_probs=232.3

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++++   ++++ +.|.|+|++|||+|||.+++||++|++.+.|..+....++|.++|||++|+|+++|++++
T Consensus         8 mka~~~~~~~~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~   83 (343)
T 3gaz_A            8 MIAAVVEEANGP---FVLR-KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVD   83 (343)
T ss_dssp             EEEEEECSTTCC---EEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             heEEEEecCCCc---eEEE-eccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCC
Confidence            899999999987   7998 899999999999999999999999999999875433356889999999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga  159 (284)
                      +|++||||++.....    ...+|+|+||+++|++.++++|++++++++|+++++++|||+++ +.+++++|++|||+|+
T Consensus        84 ~~~vGdrV~~~~~g~----~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga  159 (343)
T 3gaz_A           84 SFRVGDAVFGLTGGV----GGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGG  159 (343)
T ss_dssp             SCCTTCEEEEECCSS----TTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETT
T ss_pred             CCCCCCEEEEEeCCC----CCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecC
Confidence            999999999865321    12479999999999999999999999999999999999999999 7899999999999999


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC--cHHHHHh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKA  231 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~--~~~~~~~  231 (284)
                      +|++|++++++|+.. |++|+++ .++++++.++++|++. ++ ...++.+.      ++++|++|||+|+  ...++++
T Consensus       160 ~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~lGa~~-i~-~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~  235 (343)
T 3gaz_A          160 GGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDLGATP-ID-ASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSA  235 (343)
T ss_dssp             TSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHHTSEE-EE-TTSCHHHHHHHHHTTSCEEEEEESSCTHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHcCCCE-ec-cCCCHHHHHHHHhcCCCceEEEECCCcHHHHHHHHH
Confidence            999999999999995 9999988 8899999999999988 77 43333221      4589999999996  4889999


Q ss_pred             hccCCEEEEEcCCCCC-------CceeEEEec-------------cHHHHHHHHHHHHCCCeeEeec-ccccC
Q 023273          232 VKEGGRVVSIIGSVTP-------PASSFVLTS-------------DGSILEKLNPYFESGKVKAIID-PKGLL  283 (284)
Q Consensus       232 l~~~G~~v~~g~~~~~-------~~~~~~~~~-------------~~~~~~~~~~~~~~g~i~~~i~-~~~~~  283 (284)
                      |+++|+++.+|.....       ..+.+....             ..++++++++++++|+|++.|+ ++|||
T Consensus       236 l~~~G~iv~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~l  308 (343)
T 3gaz_A          236 VKRFGHVVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDPRTFSI  308 (343)
T ss_dssp             EEEEEEEEESCCCSCCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCCCBCSCCEET
T ss_pred             HhcCCeEEEEcccCccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcccCccCcEecH
Confidence            9999999999876421       112222111             1378999999999999999999 79987

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=9e-46  Score=327.15  Aligned_cols=275  Identities=28%  Similarity=0.393  Sum_probs=233.9

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++++++.+   ++++ +.|.|+|++|||+|||.+++||++|++.+.|.++. ..++|.++|||++|+|+++|++++
T Consensus         3 MkA~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~P~v~G~E~~G~V~~vG~~v~   77 (340)
T 3s2e_A            3 MKAAVVRAFGAP---LTID-EVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPV-KPTLPFIPGHEGVGYVSAVGSGVS   77 (340)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSS-CCCSSBCCCSEEEEEEEEECSSCC
T ss_pred             eEEEEEecCCCC---CEEE-EccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCC-CCCCCcccCCcceEEEEEECCCCC
Confidence            899999998876   7998 89999999999999999999999999999997653 246789999999999999999999


Q ss_pred             CCCCCCEEEEec-----C--------------ccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           81 KFKVGDEVYGDI-----N--------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        81 ~~~~Gd~V~~~~-----~--------------~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      +|++||||+...     +              +....+...+|+|+||+++|++.++++|++++++++|++++++.|||+
T Consensus        78 ~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  157 (340)
T 3s2e_A           78 RVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYK  157 (340)
T ss_dssp             SCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHH
T ss_pred             cCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHH
Confidence            999999995321     1              111133456799999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC----CCcccE
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----PEKFDV  217 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~d~  217 (284)
                      +++..++++|++|||+| +|++|++++|+|+.+ |++|++++++++|.+.++++|+++++|++..++.+.    .+++|+
T Consensus       158 ~l~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~  235 (340)
T 3s2e_A          158 GLKVTDTRPGQWVVISG-IGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHG  235 (340)
T ss_dssp             HHHTTTCCTTSEEEEEC-CSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEE
T ss_pred             HHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCE
Confidence            99888999999999999 599999999999996 999999999999999999999999999876553321    348999


Q ss_pred             EEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCce----------eE--EEeccHHHHHHHHHHHHCCCeeEeeccccc
Q 023273          218 VFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SF--VLTSDGSILEKLNPYFESGKVKAIIDPKGL  282 (284)
Q Consensus       218 vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~g~i~~~i~~~~~  282 (284)
                      +||++|+   .+.++++|+++|+++.+|.+..+..+          .+  ......++++++++++++|++++.+ ++||
T Consensus       236 vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~-~~~~  314 (340)
T 3s2e_A          236 VLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKATV-STAK  314 (340)
T ss_dssp             EEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCCE-EEEC
T ss_pred             EEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCCceE-EEEe
Confidence            9999985   48899999999999999876532111          11  1123578999999999999999876 4567


Q ss_pred             C
Q 023273          283 L  283 (284)
Q Consensus       283 ~  283 (284)
                      |
T Consensus       315 l  315 (340)
T 3s2e_A          315 L  315 (340)
T ss_dssp             G
T ss_pred             H
Confidence            5

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=9.7e-46  Score=327.14  Aligned_cols=267  Identities=28%  Similarity=0.380  Sum_probs=229.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..++.+ +.++++ +.|.|+|++|||+|||.+++||++|++.+.|.++ ...++|.++|||++|+|+++|++++
T Consensus        22 MkA~~~~~~g~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~p~v~G~E~~G~V~~vG~~v~   98 (342)
T 4eye_A           22 MKAIQAQSLSGP-EGLVYT-DVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQ-LKMEPPFVPGIETAGVVRSAPEGSG   98 (342)
T ss_dssp             EEEEEECSSSGG-GGEEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSS-SCCCSSBCCCSEEEEEEEECCTTSS
T ss_pred             eEEEEEecCCCC-ceeEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC-CCCCCCCccceeEEEEEEEECCCCC
Confidence            899999998887 678999 8999999999999999999999999999999764 2346789999999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga  159 (284)
                       |++||||+++..         +|+|++|++++.+.++++|++++++++|+++++++|||+++ +.+++++|++|||+|+
T Consensus        99 -~~vGDrV~~~~~---------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga  168 (342)
T 4eye_A           99 -IKPGDRVMAFNF---------IGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGA  168 (342)
T ss_dssp             -CCTTCEEEEECS---------SCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             -CCCCCEEEEecC---------CCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence             999999999753         69999999999999999999999999999999999999999 6899999999999998


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC--cHHHHHh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKA  231 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~--~~~~~~~  231 (284)
                      +|++|++++++|+.+ |++|+++++++++++.++++|++.+++++ .++.+.      ++++|++|||+|+  ...++++
T Consensus       169 sg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~~~~~~~~~~  246 (342)
T 4eye_A          169 AGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRT  246 (342)
T ss_dssp             TSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC--CHHHHHHT
T ss_pred             CCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCchhHHHHHHHh
Confidence            899999999999996 99999999999999999999999999887 443321      3479999999995  5899999


Q ss_pred             hccCCEEEEEcCCCCC-----------CceeEEEec-----------cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          232 VKEGGRVVSIIGSVTP-----------PASSFVLTS-----------DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       232 l~~~G~~v~~g~~~~~-----------~~~~~~~~~-----------~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      |+++|+++.+|.....           ..+.+....           ..++++++++++++| +++.|+++|||
T Consensus       247 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~i~~~~~l  319 (342)
T 4eye_A          247 LASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPVSARIPL  319 (342)
T ss_dssp             EEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCCEEEEEEG
T ss_pred             hcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCCcceEEeH
Confidence            9999999999865321           111221111           125789999999999 99999999986

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=1.1e-45  Score=325.92  Aligned_cols=267  Identities=29%  Similarity=0.357  Sum_probs=233.0

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++++ +.++++ +.|.|+|++|||+|||.+++||++|++.+.|.++   .++|.++|||++|+|+++|++++
T Consensus         9 mka~~~~~~g~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---~~~P~i~G~e~~G~V~~vG~~v~   83 (334)
T 3qwb_A            9 QKVILIDEIGGY-DVIKYE-DYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP---CEKPYVLGREASGTVVAKGKGVT   83 (334)
T ss_dssp             EEEEEESSSSSG-GGEEEE-EEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC---CCSSEECCSEEEEEEEEECTTCC
T ss_pred             eEEEEEecCCCC-ceeEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC---CCCCCccccceEEEEEEECCCCC
Confidence            899999999987 778998 8999999999999999999999999999999764   35789999999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeee-cCceeeCCCCCCHHh---hhcccchHHHHHHHHH-hcccCCCCEEE
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVE-ENLLALKPKNLSFVE---AASLPLATETAYEGLE-RSAFSAGKSIL  155 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~ip~~~~~~~---aa~~~~~~~ta~~al~-~~~~~~g~~vl  155 (284)
                      +|++||||++..          +|+|++|++++ .+.++++|+++++++   ++++++.+.|||+++. ..++++|++|+
T Consensus        84 ~~~~GdrV~~~~----------~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl  153 (334)
T 3qwb_A           84 NFEVGDQVAYIS----------NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVL  153 (334)
T ss_dssp             SCCTTCEEEEEC----------SSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEE
T ss_pred             CCCCCCEEEEee----------CCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEE
Confidence            999999999864          69999999999 999999999999999   8888889999999995 57999999999


Q ss_pred             EEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC--cHH
Q 023273          156 VLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDK  227 (284)
Q Consensus       156 I~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~--~~~  227 (284)
                      |+|++|++|++++++++.. |++|++++++++|++.++++|++.+++++..++.+.      ++++|++|||+|.  .+.
T Consensus       154 V~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~  232 (334)
T 3qwb_A          154 LFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEI  232 (334)
T ss_dssp             ESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGGGGHHH
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCChHHHHH
Confidence            9999999999999999995 999999999999999999999999999876554331      4589999999995  588


Q ss_pred             HHHhhccCCEEEEEcCCCCCC-----------ceeEEE---e---cc----HHHHHHHHHHHHCCCeeEeecccccC
Q 023273          228 ALKAVKEGGRVVSIIGSVTPP-----------ASSFVL---T---SD----GSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       228 ~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~---~---~~----~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      ++++|+++|+++.+|....+.           .+.+..   .   ..    .+.++++++++++|++++.|+++|||
T Consensus       233 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l  309 (334)
T 3qwb_A          233 SLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYKTYPL  309 (334)
T ss_dssp             HHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCCEEEEEEG
T ss_pred             HHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCceeeEEcH
Confidence            999999999999998754221           122221   0   12    23457999999999999999999986

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=1.3e-45  Score=327.66  Aligned_cols=273  Identities=24%  Similarity=0.283  Sum_probs=231.3

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHH-HHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFK-RMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~-~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      |||++++++++    ++++ +.|.|+|++|||+|||.+++||++|++ ++.|.++   .++|.++|||++|+|+++|+++
T Consensus         1 MkA~~~~~~~~----~~~~-e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~---~~~p~v~G~E~~G~V~~vG~~v   72 (352)
T 3fpc_A            1 MKGFAMLSIGK----VGWI-EKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG---ERHNMILGHEAVGEVVEVGSEV   72 (352)
T ss_dssp             CEEEEEEETTE----EEEE-ECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC---CCSSEECCCEEEEEEEEECTTC
T ss_pred             CeEEEEccCCC----ceEE-eCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC---CCCCcccCCcceEEEEEECCCC
Confidence            99999999987    4888 899999999999999999999999999 6688754   3578999999999999999999


Q ss_pred             CCCCCCCEEEEecCcc---------------------ccCCCCCCCceeeEEeeecC--ceeeCCCCCCHHhhhcccchH
Q 023273           80 KKFKVGDEVYGDINEK---------------------ALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLAT  136 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~---------------------~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~  136 (284)
                      ++|++||||++.+...                     ...+...+|+|+||+++|.+  .++++|++++++++|+++.++
T Consensus        73 ~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~  152 (352)
T 3fpc_A           73 KDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMM  152 (352)
T ss_dssp             CSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHH
T ss_pred             CcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchh
Confidence            9999999998743110                     01122357999999999976  899999999999999999999


Q ss_pred             HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC----
Q 023273          137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----  211 (284)
Q Consensus       137 ~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----  211 (284)
                      .|||++++..++++|++|+|+| +|++|++++++|+.+ |+ +|++++++++|++.++++|++++++++..++.+.    
T Consensus       153 ~ta~~al~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~  230 (352)
T 3fpc_A          153 TTGFHGAELANIKLGDTVCVIG-IGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKA  230 (352)
T ss_dssp             HHHHHHHHHTTCCTTCCEEEEC-CSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHH
Confidence            9999999999999999999999 699999999999996 87 8999999999999999999999999876554331    


Q ss_pred             --CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee--------------EEEe---ccHHHHHHHHHHHH
Q 023273          212 --PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS--------------FVLT---SDGSILEKLNPYFE  269 (284)
Q Consensus       212 --~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~--------------~~~~---~~~~~~~~~~~~~~  269 (284)
                        ++++|++||++|+   .+.++++|+++|+++.+|.......++              +...   ...+++++++++++
T Consensus       231 t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~  310 (352)
T 3fpc_A          231 TDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVF  310 (352)
T ss_dssp             TTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHHH
Confidence              3479999999986   489999999999999998764322211              1111   23678999999999


Q ss_pred             CCCeeE--eeccccc-C
Q 023273          270 SGKVKA--IIDPKGL-L  283 (284)
Q Consensus       270 ~g~i~~--~i~~~~~-~  283 (284)
                      +|++++  +|+++|| |
T Consensus       311 ~g~i~~~~~i~~~~~gl  327 (352)
T 3fpc_A          311 YKRVDPSKLVTHVFRGF  327 (352)
T ss_dssp             TTSCCGGGGEEEEEEST
T ss_pred             cCCCChhHhheeeCCCH
Confidence            999987  4899998 5

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=2.2e-45  Score=329.04  Aligned_cols=275  Identities=22%  Similarity=0.269  Sum_probs=231.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++++   ++++ +.|.|+|++|||+|||.+++||++|++.+.|.++  ..++|.++|||++|+|+++|++++
T Consensus         9 mkA~v~~~~~~~---l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~P~v~GhE~~G~V~~vG~~v~   82 (378)
T 3uko_A            9 CKAAVAYEPNKP---LVIE-DVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDP--EGLFPCILGHEAAGIVESVGEGVT   82 (378)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCT--TCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             eEEEEEecCCCc---cEEE-EecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCC--CCCCCccCCccceEEEEEeCCCCC
Confidence            899999999986   7998 8999999999999999999999999999998754  346789999999999999999999


Q ss_pred             CCCCCCEEEEecCccc--------------c--------------------------CCCCCCCceeeEEeeecCceeeC
Q 023273           81 KFKVGDEVYGDINEKA--------------L--------------------------DHPKRNGSLAEYTAVEENLLALK  120 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~--------------~--------------------------~~~~~~g~~~~~~~~~~~~~~~i  120 (284)
                      +|++||||++.+....              .                          ......|+|+||+++|++.++++
T Consensus        83 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  162 (378)
T 3uko_A           83 EVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKI  162 (378)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred             cCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEEC
Confidence            9999999987653110              0                          00112379999999999999999


Q ss_pred             CCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCc
Q 023273          121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD  198 (284)
Q Consensus       121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~  198 (284)
                      |++++++++|++++++.|||+++ +..++++|++|+|+|+ |++|++++++|+.+ |+ +|++++++++|+++++++|++
T Consensus       163 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~-Ga~~Vi~~~~~~~~~~~a~~lGa~  240 (378)
T 3uko_A          163 DPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTA-GASRIIGIDIDSKKYETAKKFGVN  240 (378)
T ss_dssp             CTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHH-TCSCEEEECSCTTHHHHHHTTTCC
T ss_pred             CCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCc
Confidence            99999999999999999999998 6789999999999995 99999999999996 87 899999999999999999999


Q ss_pred             EEeeCC--Cccccc-----CCCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCCCCceeE-----------EE--
Q 023273          199 LAIDYT--KENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPASSF-----------VL--  254 (284)
Q Consensus       199 ~~~~~~--~~~~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-----------~~--  254 (284)
                      ++++++  ..++.+     ..+++|++|||+|+   .+.++++|+++ |+++.+|.......+.+           ..  
T Consensus       241 ~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~  320 (378)
T 3uko_A          241 EFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTA  320 (378)
T ss_dssp             EEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECS
T ss_pred             EEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhcCcEEEEEE
Confidence            999886  333322     13489999999997   37899999996 99999987643222221           11  


Q ss_pred             e---ccHHHHHHHHHHHHCCCee--EeecccccC
Q 023273          255 T---SDGSILEKLNPYFESGKVK--AIIDPKGLL  283 (284)
Q Consensus       255 ~---~~~~~~~~~~~~~~~g~i~--~~i~~~~~~  283 (284)
                      .   ...++++++++++++|+++  +.|+++|||
T Consensus       321 ~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l  354 (378)
T 3uko_A          321 FGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTL  354 (378)
T ss_dssp             GGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG
T ss_pred             ecCCCchHHHHHHHHHHHcCCCChhHheeeEeeH
Confidence            0   1357899999999999987  569999986

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=1.6e-45  Score=328.07  Aligned_cols=271  Identities=29%  Similarity=0.442  Sum_probs=229.9

Q ss_pred             CeEEEEccc---CCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCC
Q 023273            1 MKAWVYKEY---GNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS   77 (284)
Q Consensus         1 m~a~~~~~~---g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   77 (284)
                      |||++++++   +.+ ..++++ +.|.|+|++|||+|||.+++||++|++.+.|.++.  ..+|.++|||++|+|+++|+
T Consensus        23 MkA~~~~~~~~~~~~-~~l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~p~v~G~E~~G~V~~vG~   98 (363)
T 4dvj_A           23 MKAVGYNKPAPITDD-ASLLDI-ELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPD--GTDWKVIGYDAAGIVSAVGP   98 (363)
T ss_dssp             EEEEEBSSCCCTTST-TSSEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC----CCSBCCCCCEEEEEEEECT
T ss_pred             eEEEEEeccCCCCCC-ceEEEe-ecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCC--CCCCCcccceeEEEEEEeCC
Confidence            899999987   444 568998 88999999999999999999999999999987642  46789999999999999999


Q ss_pred             CCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccC-----CC
Q 023273           78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFS-----AG  151 (284)
Q Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~-----~g  151 (284)
                      ++++|++||||++...      ...+|+|+||+++|++.++++|++++++++|+++++++|||+++ +..+++     +|
T Consensus        99 ~v~~~~vGdrV~~~~~------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g  172 (363)
T 4dvj_A           99 DVTLFRPGDEVFYAGS------IIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAA  172 (363)
T ss_dssp             TCCSCCTTCEEEECCC------TTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSE
T ss_pred             CCCCCCCCCEEEEccC------CCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCC
Confidence            9999999999988542      23479999999999999999999999999999999999999998 577887     89


Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc---C-CCcccEEEeCCCC---
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED---L-PEKFDVVFDAVGQ---  224 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~-~~~~d~vid~~g~---  224 (284)
                      ++|+|+||+|++|++++|+|+.+++++|++++++++|++.++++|++++++++++....   . .+++|++|||+|+   
T Consensus       173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g~~~~  252 (363)
T 4dvj_A          173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKH  252 (363)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSCHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCCchhh
Confidence            99999999999999999999985589999999999999999999999999986532111   1 4589999999995   


Q ss_pred             cHHHHHhhccCCEEEEEcCCCCC-------CceeEEEe--c------------cHHHHHHHHHHHHCCCeeEeecccc
Q 023273          225 CDKALKAVKEGGRVVSIIGSVTP-------PASSFVLT--S------------DGSILEKLNPYFESGKVKAIIDPKG  281 (284)
Q Consensus       225 ~~~~~~~l~~~G~~v~~g~~~~~-------~~~~~~~~--~------------~~~~~~~~~~~~~~g~i~~~i~~~~  281 (284)
                      .+.++++|+++|+++.++.+...       ..+.+...  .            ..+.++++++++++|+|++.|+++|
T Consensus       253 ~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  330 (363)
T 4dvj_A          253 AAEIADLIAPQGRFCLIDDPSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRL  330 (363)
T ss_dssp             HHHHHHHSCTTCEEEECSCCSSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCCEEEEE
T ss_pred             HHHHHHHhcCCCEEEEECCCCccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeecccccee
Confidence            47899999999999999754311       12222211  0            1467899999999999999998876

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=2e-45  Score=325.62  Aligned_cols=268  Identities=31%  Similarity=0.482  Sum_probs=230.2

Q ss_pred             CeEEEEcccC---CCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCC
Q 023273            1 MKAWVYKEYG---NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS   77 (284)
Q Consensus         1 m~a~~~~~~g---~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   77 (284)
                      |||++++++|   .+ +.++++ +.|.|+|++|||+|||.+++||++|++.+.|.    ...+|.++|||++|+|+++|+
T Consensus         3 MkA~~~~~~G~~~~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~----~~~~p~i~G~e~~G~V~~vG~   76 (346)
T 3fbg_A            3 LKAIGFEQPFKLSDG-NLFKTF-NLDIPEPKVHEILVKIQSISVNPVDTKQRLMD----VSKAPRVLGFDAIGVVESVGN   76 (346)
T ss_dssp             EEEEEBSSCCCGGGC-CCCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHTTSC----CSSSCBCCCCCEEEEEEEECT
T ss_pred             cEEEEEEeccccCCC-ceeEec-cccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC----CCCCCcCcCCccEEEEEEeCC
Confidence            8999999987   34 568999 89999999999999999999999999998886    246789999999999999999


Q ss_pred             CCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccC------C
Q 023273           78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFS------A  150 (284)
Q Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~------~  150 (284)
                      ++++|++||||++...      ...+|+|++|+++|++.++++|++++++++|+++++++|||+++ +..+++      +
T Consensus        77 ~v~~~~~GdrV~~~~~------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~  150 (346)
T 3fbg_A           77 EVTMFNQGDIVYYSGS------PDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENE  150 (346)
T ss_dssp             TCCSCCTTCEEEECCC------TTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHT
T ss_pred             CCCcCCCCCEEEEcCC------CCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCC
Confidence            9999999999998642      23479999999999999999999999999999999999999999 578888      9


Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----CCCcccEEEeCCCC--
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----LPEKFDVVFDAVGQ--  224 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~d~vid~~g~--  224 (284)
                      |++|+|+|++|++|++++++|+.. |++|+++++++++++.++++|++++++++++....    ..+++|++|||+|+  
T Consensus       151 g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~~  229 (346)
T 3fbg_A          151 GKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDM  229 (346)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHHH
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCchH
Confidence            999999988999999999999995 99999999999999999999999999887532221    14589999999995  


Q ss_pred             -cHHHHHhhccCCEEEEEcCCCCC--------CceeEEEe--c------------cHHHHHHHHHHHHCCCeeEeecccc
Q 023273          225 -CDKALKAVKEGGRVVSIIGSVTP--------PASSFVLT--S------------DGSILEKLNPYFESGKVKAIIDPKG  281 (284)
Q Consensus       225 -~~~~~~~l~~~G~~v~~g~~~~~--------~~~~~~~~--~------------~~~~~~~~~~~~~~g~i~~~i~~~~  281 (284)
                       .+.++++|+++|+++.++....+        ..+.+...  .            ..+.++++++++++|+|++.|+++|
T Consensus       230 ~~~~~~~~l~~~G~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  309 (346)
T 3fbg_A          230 YYDDMIQLVKPRGHIATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTKVI  309 (346)
T ss_dssp             HHHHHHHHEEEEEEEEESSCCSSCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred             HHHHHHHHhccCCEEEEECCCCCCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEECCcccee
Confidence             37899999999999988764322        12222211  1            1367899999999999999999887

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.4e-45  Score=326.98  Aligned_cols=268  Identities=28%  Similarity=0.395  Sum_probs=223.4

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++++++.+ +.++++ +.+.|+|++|||+|||.+++||++|++.+.|.++ ....+|.++|||++|+|+++|++++
T Consensus         4 mka~~~~~~g~~-~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~p~v~G~e~~G~V~~vG~~v~   80 (349)
T 4a27_A            4 MRAVVLAGFGGL-NKLRLF-RKAMPEPQDGELKIRVKACGLNFIDLMVRQGNID-NPPKTPLVPGFECSGIVEALGDSVK   80 (349)
T ss_dssp             EEEEEECSSSSG-GGEEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS-SCCCSSBCCCSEEEEEEEEECTTCC
T ss_pred             eEEEEEccCCCc-ceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcC-CCCCCCccccceeEEEEEEeCCCCC
Confidence            899999999987 668998 8899999999999999999999999999999864 2346789999999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga  159 (284)
                      +|++||||+++..         +|+|++|+++|.+.++++|++++++++|+++++++|||+++ +.+++++|++|+|+|+
T Consensus        81 ~~~~GdrV~~~~~---------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga  151 (349)
T 4a27_A           81 GYEIGDRVMAFVN---------YNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSA  151 (349)
T ss_dssp             SCCTTCEEEEECS---------SCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             CCCCCCEEEEecC---------CCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            9999999998753         69999999999999999999999999999999999999998 6789999999999998


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-----CCCcccEEEeCCCC--cHHHHHhh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--CDKALKAV  232 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g~--~~~~~~~l  232 (284)
                      +|++|++++|+|+.+++.+|+++. ++++.+.++ +|++++++ ...++.+     .++++|++|||+|+  ...++++|
T Consensus       152 ~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~~~~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~l  228 (349)
T 4a27_A          152 GGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD-RNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLL  228 (349)
T ss_dssp             TSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-TTSCHHHHHHHHCTTCEEEEEEECC-------CTTE
T ss_pred             CcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-CCccHHHHHHHhcCCCceEEEECCCchhHHHHHHHh
Confidence            899999999999986456777776 677888888 99999998 4333222     14689999999985  47899999


Q ss_pred             ccCCEEEEEcCCCCCC---------------------------ceeEEEec-------------cHHHHHHHHHHHHCCC
Q 023273          233 KEGGRVVSIIGSVTPP---------------------------ASSFVLTS-------------DGSILEKLNPYFESGK  272 (284)
Q Consensus       233 ~~~G~~v~~g~~~~~~---------------------------~~~~~~~~-------------~~~~~~~~~~~~~~g~  272 (284)
                      +++|+++.+|......                           ...+....             ..++++++++++++|+
T Consensus       229 ~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  308 (349)
T 4a27_A          229 KPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKK  308 (349)
T ss_dssp             EEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTS
T ss_pred             hcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCC
Confidence            9999999998653100                           00111100             1678999999999999


Q ss_pred             eeEeecccccC
Q 023273          273 VKAIIDPKGLL  283 (284)
Q Consensus       273 i~~~i~~~~~~  283 (284)
                      +++.|+++|||
T Consensus       309 l~~~i~~~~~l  319 (349)
T 4a27_A          309 IKPVVDSLWAL  319 (349)
T ss_dssp             CCCCEEEEECG
T ss_pred             ccccccceECH
Confidence            99999999986

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=2.2e-45  Score=325.01  Aligned_cols=279  Identities=34%  Similarity=0.452  Sum_probs=235.2

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++.+ +.++++ +.+.|+|++|||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus         1 Mka~~~~~~g~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~G~E~~G~V~~vG~~v~   77 (343)
T 2eih_A            1 MRAVVMRARGGP-EVLEVA-DLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASP-KLPLPHVLGADGSGVVDAVGPGVE   77 (343)
T ss_dssp             CEEEEECSSSSG-GGEEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSST-TCCSSEECCSEEEEEEEEECSSCC
T ss_pred             CeEEEEecCCCC-ceEEEE-ecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCC-CCCCCcccccceEEEEEEECCCCC
Confidence            999999999976 568898 88999999999999999999999999999987642 235789999999999999999999


Q ss_pred             CCCCCCEEEEecCc-------c-----------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273           81 KFKVGDEVYGDINE-------K-----------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~-------~-----------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (284)
                      +|++||||+..+..       +           ...+...+|+|+||+++|++.++++|++++++++|+++.++.|||++
T Consensus        78 ~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~a  157 (343)
T 2eih_A           78 GFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQM  157 (343)
T ss_dssp             SCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHH
T ss_pred             CCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHH
Confidence            99999999853310       0           00113347999999999999999999999999999999999999999


Q ss_pred             HHh-cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcc
Q 023273          143 LER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKF  215 (284)
Q Consensus       143 l~~-~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~  215 (284)
                      +.. +++++|++|+|+|++|++|++++++++.. |++|+++++++++.+.++++|++.++|++..++.+    .  .+++
T Consensus       158 l~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~  236 (343)
T 2eih_A          158 VVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGA  236 (343)
T ss_dssp             HTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCE
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCc
Confidence            965 79999999999998899999999999995 99999999999999999999998888876544322    1  3479


Q ss_pred             cEEEeCCCC--cHHHHHhhccCCEEEEEcCCCCCC-----------ceeEEE--eccHHHHHHHHHHHHCCCeeEeeccc
Q 023273          216 DVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTPP-----------ASSFVL--TSDGSILEKLNPYFESGKVKAIIDPK  280 (284)
Q Consensus       216 d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~--~~~~~~~~~~~~~~~~g~i~~~i~~~  280 (284)
                      |++||++|.  .+.++++|+++|+++.+|......           .+++..  ....++++++++++++|++++.|+++
T Consensus       237 d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~  316 (343)
T 2eih_A          237 DKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPVVGQV  316 (343)
T ss_dssp             EEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHHTSSCCCEEEE
T ss_pred             eEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHcCCCCCceeEE
Confidence            999999984  488999999999999998654221           112211  12467899999999999999999999


Q ss_pred             ccC
Q 023273          281 GLL  283 (284)
Q Consensus       281 ~~~  283 (284)
                      |||
T Consensus       317 ~~l  319 (343)
T 2eih_A          317 LPL  319 (343)
T ss_dssp             EEG
T ss_pred             eeH
Confidence            986

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=2.8e-45  Score=324.99  Aligned_cols=270  Identities=21%  Similarity=0.250  Sum_probs=229.1

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++.++++.   ++++ +.|.|+|++|||+|||.+++||++|++.+.|.++.  .++|.++|||++|+|+++|++++
T Consensus         5 mka~~~~~~~~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~p~i~G~E~~G~V~~vG~~v~   78 (348)
T 3two_A            5 SKGFAIFSKDEH---FKPH-DFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKE--GIYPMIPGHEIAGIIKEVGKGVK   78 (348)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSC--CCSSBCCCCCEEEEEEEECTTCC
T ss_pred             EEEEEEccCCCC---CeEE-EeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCC--CCCCeecCcceeEEEEEECCCCC
Confidence            799999998876   7998 89999999999999999999999999999997643  46789999999999999999999


Q ss_pred             CCCCCCEEEEecC-----cc-------------ccC----------CCCCCCceeeEEeeecCceeeCCCCCCHHhhhcc
Q 023273           81 KFKVGDEVYGDIN-----EK-------------ALD----------HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL  132 (284)
Q Consensus        81 ~~~~Gd~V~~~~~-----~~-------------~~~----------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~  132 (284)
                      +|++||||++.+.     .+             ...          +....|+|+||+++|++.++++|++++++++|.+
T Consensus        79 ~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  158 (348)
T 3two_A           79 KFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPL  158 (348)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGG
T ss_pred             CCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhh
Confidence            9999999976421     00             000          1112399999999999999999999999999999


Q ss_pred             cchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCC
Q 023273          133 PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLP  212 (284)
Q Consensus       133 ~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  212 (284)
                      ++++.|||+++...++++|++|+|+| +|++|++++|+|+.+ |++|++++++++|.+.++++|+++++ .+.+.+   .
T Consensus       159 ~~~~~ta~~~l~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~~~~---~  232 (348)
T 3two_A          159 LCAGITTYSPLKFSKVTKGTKVGVAG-FGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSMGVKHFY-TDPKQC---K  232 (348)
T ss_dssp             GTHHHHHHHHHHHTTCCTTCEEEEES-CSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHTTCSEEE-SSGGGC---C
T ss_pred             hhhHHHHHHHHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCCCeec-CCHHHH---h
Confidence            99999999999888999999999999 599999999999996 89999999999999999999999888 433332   3


Q ss_pred             CcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCC-CCCc-ee-----------EE--EeccHHHHHHHHHHHHCCCee
Q 023273          213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV-TPPA-SS-----------FV--LTSDGSILEKLNPYFESGKVK  274 (284)
Q Consensus       213 ~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~-~~~~-~~-----------~~--~~~~~~~~~~~~~~~~~g~i~  274 (284)
                      +++|++||++|+   .+.++++|+++|+++.+|.+. .+.. ++           +.  .....++++++++++++|+++
T Consensus       233 ~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~  312 (348)
T 3two_A          233 EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEMVDFSIKHNIY  312 (348)
T ss_dssp             SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCHHHHHHHHHHHHHTTCC
T ss_pred             cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCHHHHHHHHHHHHhCCCC
Confidence            399999999985   489999999999999998765 3222 22           11  122468899999999999999


Q ss_pred             EeecccccC
Q 023273          275 AIIDPKGLL  283 (284)
Q Consensus       275 ~~i~~~~~~  283 (284)
                      +.+ ++|||
T Consensus       313 ~~~-~~~~l  320 (348)
T 3two_A          313 PEI-DLILG  320 (348)
T ss_dssp             CCE-EEECG
T ss_pred             ceE-EEEEH
Confidence            976 68886

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=1.5e-44  Score=319.16  Aligned_cols=275  Identities=29%  Similarity=0.413  Sum_probs=231.4

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++..   ++++ +.|.|+|++|||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus         1 Mka~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~GhE~~G~V~~vG~~v~   75 (339)
T 1rjw_A            1 MKAAVVEQFKEP---LKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPV-KPKLPLIPGHEGVGIVEEVGPGVT   75 (339)
T ss_dssp             CEEEEBSSTTSC---CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS-CCCSSBCCCSCEEEEEEEECTTCC
T ss_pred             CeEEEEcCCCCC---cEEE-EeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCc-CCCCCeeccccceEEEEEECCCCC
Confidence            999999999855   7898 89999999999999999999999999999887642 235789999999999999999999


Q ss_pred             CCCCCCEEEEec-----Ccc--------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           81 KFKVGDEVYGDI-----NEK--------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        81 ~~~~Gd~V~~~~-----~~~--------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      +|++||||++.+     +.+              ...+...+|+|+||+++|++.++++|++++++++|++++++.|||+
T Consensus        76 ~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  155 (339)
T 1rjw_A           76 HLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYK  155 (339)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHH
T ss_pred             cCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHH
Confidence            999999998642     111              0112345799999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC----CCcccE
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----PEKFDV  217 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~d~  217 (284)
                      ++...++++|++|+|+|+ |++|++++++|+.+ |++|+++++++++++.++++|++.++|+++.++.+.    .+++|+
T Consensus       156 ~l~~~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~  233 (339)
T 1rjw_A          156 ALKVTGAKPGEWVAIYGI-GGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHA  233 (339)
T ss_dssp             HHHHHTCCTTCEEEEECC-STTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEE
T ss_pred             HHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCE
Confidence            997779999999999997 88999999999996 899999999999999999999998888765443221    258999


Q ss_pred             EEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCc----------eeEE--EeccHHHHHHHHHHHHCCCeeEeeccccc
Q 023273          218 VFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA----------SSFV--LTSDGSILEKLNPYFESGKVKAIIDPKGL  282 (284)
Q Consensus       218 vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~----------~~~~--~~~~~~~~~~~~~~~~~g~i~~~i~~~~~  282 (284)
                      +||++|.   .+.++++|+++|+++.+|.+..+..          +++.  .....++++++++++++|++++.+ ++||
T Consensus       234 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~-~~~~  312 (339)
T 1rjw_A          234 AVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTII-EVQP  312 (339)
T ss_dssp             EEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCCE-EEEE
T ss_pred             EEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcCCCCccE-EEEc
Confidence            9999996   3789999999999999987653211          1111  122468899999999999999875 6788


Q ss_pred             C
Q 023273          283 L  283 (284)
Q Consensus       283 ~  283 (284)
                      |
T Consensus       313 l  313 (339)
T 1rjw_A          313 L  313 (339)
T ss_dssp             G
T ss_pred             H
Confidence            6

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=7.6e-45  Score=323.59  Aligned_cols=273  Identities=23%  Similarity=0.279  Sum_probs=230.8

Q ss_pred             CeEEEEcccCCCccceEEecc--ccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETN--VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ   78 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~--~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~   78 (284)
                      |||+++.+++.+   ++++ +  .|.|+|++|||+|||.+++||++|++.+.|.++.  .++|.++|||++|+|+++|++
T Consensus         7 mka~~~~~~~~~---l~~~-~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~p~v~GhE~~G~V~~vG~~   80 (360)
T 1piw_A            7 FEGIAIQSHEDW---KNPK-KTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN--MKMPLVVGHEIVGKVVKLGPK   80 (360)
T ss_dssp             EEEEEECCSSST---TSCE-EEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSC--CCSSEECCCCEEEEEEEECTT
T ss_pred             eEEEEEecCCCC---eeEE-eccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCC--CCCCcccCcCceEEEEEeCCC
Confidence            899999998854   6787 7  8899999999999999999999999999987542  357899999999999999999


Q ss_pred             CC-CCCCCCEEEEec-----Ccc---------------ccC------CCCCCCceeeEEeeecCceeeCCCCCCHHhhhc
Q 023273           79 VK-KFKVGDEVYGDI-----NEK---------------ALD------HPKRNGSLAEYTAVEENLLALKPKNLSFVEAAS  131 (284)
Q Consensus        79 ~~-~~~~Gd~V~~~~-----~~~---------------~~~------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~  131 (284)
                      ++ +|++||||+..+     +.+               ...      +...+|+|+||+++|++.++++|++++++++|+
T Consensus        81 v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  160 (360)
T 1piw_A           81 SNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAP  160 (360)
T ss_dssp             CCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHGG
T ss_pred             CCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhhh
Confidence            99 999999995421     110               001      223579999999999999999999999999999


Q ss_pred             ccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCc-cc-c
Q 023273          132 LPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE-NI-E  209 (284)
Q Consensus       132 ~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-~~-~  209 (284)
                      +++++.|||+++..+++++|++|||+|+ |++|++++++|+.+ |++|+++++++++++.++++|++++++++.. ++ .
T Consensus       161 l~~~~~ta~~~l~~~~~~~g~~VlV~Ga-G~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~  238 (360)
T 1piw_A          161 LLCGGLTVYSPLVRNGCGPGKKVGIVGL-GGIGSMGTLISKAM-GAETYVISRSSRKREDAMKMGADHYIATLEEGDWGE  238 (360)
T ss_dssp             GGTHHHHHHHHHHHTTCSTTCEEEEECC-SHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHH
T ss_pred             hhhhHHHHHHHHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHH
Confidence            9999999999998789999999999997 99999999999996 9999999999999999999999999987654 33 2


Q ss_pred             cCCCcccEEEeCCCC-----cHHHHHhhccCCEEEEEcCCCCCC-ceeE----------E--EeccHHHHHHHHHHHHCC
Q 023273          210 DLPEKFDVVFDAVGQ-----CDKALKAVKEGGRVVSIIGSVTPP-ASSF----------V--LTSDGSILEKLNPYFESG  271 (284)
Q Consensus       210 ~~~~~~d~vid~~g~-----~~~~~~~l~~~G~~v~~g~~~~~~-~~~~----------~--~~~~~~~~~~~~~~~~~g  271 (284)
                      ...+++|++||++|.     .+.++++|+++|+++.+|.... . .++.          .  .....++++++++++++|
T Consensus       239 ~~~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g  317 (360)
T 1piw_A          239 KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEK  317 (360)
T ss_dssp             HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCCHHHHHHHHHHHHHT
T ss_pred             HhhcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhC
Confidence            234689999999976     3789999999999999987543 2 2221          1  112468899999999999


Q ss_pred             CeeEeecccccC
Q 023273          272 KVKAIIDPKGLL  283 (284)
Q Consensus       272 ~i~~~i~~~~~~  283 (284)
                      ++++.| ++|||
T Consensus       318 ~l~~~i-~~~~l  328 (360)
T 1piw_A          318 DIKIWV-ETLPV  328 (360)
T ss_dssp             TCCCCE-EEEES
T ss_pred             CCcceE-EEEec
Confidence            999998 89987

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=1.2e-44  Score=320.50  Aligned_cols=272  Identities=20%  Similarity=0.295  Sum_probs=226.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCC-CCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPS-LREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~-~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      |||++++++|.    ++++ +.|.|+ ++||||+|||.++|||++|++.+.|..+   ..+|.++|||++|+|+++|+++
T Consensus         1 MkAvv~~~~g~----l~v~-e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~---~~~P~i~G~E~~G~V~~vG~~V   72 (346)
T 4a2c_A            1 MKSVVNDTDGI----VRVA-ESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA---HYYPITLGHEFSGYIDAVGSGV   72 (346)
T ss_dssp             CEEEEECSSSC----EEEE-ECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS---SSSSBCCCCEEEEEEEEECTTC
T ss_pred             CCEEEEecCCC----EEEE-EEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC---CCCCccccEEEEEEEEEECCCc
Confidence            99999999997    5999 899998 5799999999999999999999888643   4678999999999999999999


Q ss_pred             CCCCCCCEEEEecCc------------------cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           80 KKFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      +++++||||++.+..                  ....+...+|+|+||+++|++.++++|++++++++|++. .+.++++
T Consensus        73 ~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~  151 (346)
T 4a2c_A           73 DDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLH  151 (346)
T ss_dssp             CSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHHH
T ss_pred             ccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhch-HHHHHHH
Confidence            999999999876421                  112334567999999999999999999999999988765 4456777


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEK  214 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~  214 (284)
                      ++...+.++|++|+|+| +|++|++++|+|+++ |++ +++++.+++|+++++++|+++++|+++.+..+.      .++
T Consensus       152 ~~~~~~~~~g~~VlV~G-aG~vG~~aiq~ak~~-G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g  229 (346)
T 4a2c_A          152 AFHLAQGCENKNVIIIG-AGTIGLLAIQCAVAL-GAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRF  229 (346)
T ss_dssp             HHHHTTCCTTSEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCS
T ss_pred             HHHHhccCCCCEEEEEC-CCCcchHHHHHHHHc-CCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCC
Confidence            77889999999999999 599999999999996 765 567788999999999999999999887654432      468


Q ss_pred             ccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCc-------------eeEEEe-------ccHHHHHHHHHHHHCC
Q 023273          215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA-------------SSFVLT-------SDGSILEKLNPYFESG  271 (284)
Q Consensus       215 ~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~-------------~~~~~~-------~~~~~~~~~~~~~~~g  271 (284)
                      +|+++|++|+   .+.++++++++|+++.+|....+..             +++...       ...++++++++++++|
T Consensus       230 ~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g  309 (346)
T 4a2c_A          230 NQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTER  309 (346)
T ss_dssp             SEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTT
T ss_pred             cccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcC
Confidence            9999999996   4789999999999999987654321             111110       1247899999999999


Q ss_pred             Ce--eEeecccccC
Q 023273          272 KV--KAIIDPKGLL  283 (284)
Q Consensus       272 ~i--~~~i~~~~~~  283 (284)
                      ++  +|+|+++|||
T Consensus       310 ~l~~~~lI~~~~~l  323 (346)
T 4a2c_A          310 KLSLEPLIAHRGSF  323 (346)
T ss_dssp             CSCCGGGEEEEECH
T ss_pred             CCCCCccEeEEEeH
Confidence            87  5679999986

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.4e-44  Score=316.36  Aligned_cols=270  Identities=26%  Similarity=0.327  Sum_probs=230.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++..+|.+ +.++++ +.|.|+|++|||+|||.+++||++|++.+.|.++  ...+|.++|||++|+|+++|++++
T Consensus         2 Mka~~~~~~g~~-~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~p~v~G~E~~G~V~~vG~~v~   77 (327)
T 1qor_A            2 ATRIEFHKHGGP-EVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGLYP--PPSLPSGLGTEAAGIVSKVGSGVK   77 (327)
T ss_dssp             CEEEEBSSCCSG-GGCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC--CSSSSBCCCSCEEEEEEEECTTCC
T ss_pred             cEEEEEcCCCCh-hheEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC--CCCCCCCCCceeEEEEEEECCCCC
Confidence            999999998876 568898 8899999999999999999999999999998763  234789999999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~ga  159 (284)
                      +|++|||| +.++       ..+|+|+||+++|++.++++|++++++++|+++++++|||+++. .+++++|++|+|+|+
T Consensus        78 ~~~~GdrV-~~~g-------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga  149 (327)
T 1qor_A           78 HIKAGDRV-VYAQ-------SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAA  149 (327)
T ss_dssp             SCCTTCEE-EESC-------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             CCCCCCEE-EECC-------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC
Confidence            99999999 4431       12599999999999999999999999999999999999999995 789999999999999


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC--cHHHHHh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKA  231 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~--~~~~~~~  231 (284)
                      +|++|++++++++.. |++|+++++++++.+.++++|++.++++.+.++.+.      .+++|++|||+|.  .+.++++
T Consensus       150 ~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~  228 (327)
T 1qor_A          150 AGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDC  228 (327)
T ss_dssp             TBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHT
T ss_pred             CCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCchHHHHHHHHH
Confidence            999999999999996 899999999999999999999988888765443221      3479999999994  4889999


Q ss_pred             hccCCEEEEEcCCCCC-C-----------ceeEEEec----------cHHHHHHHHHHHHCCCeeEeec--ccccC
Q 023273          232 VKEGGRVVSIIGSVTP-P-----------ASSFVLTS----------DGSILEKLNPYFESGKVKAIID--PKGLL  283 (284)
Q Consensus       232 l~~~G~~v~~g~~~~~-~-----------~~~~~~~~----------~~~~~~~~~~~~~~g~i~~~i~--~~~~~  283 (284)
                      |+++|+++.+|..... .           .+.+....          ..+.++++++++++|++++.|+  ++|||
T Consensus       229 l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~l  304 (327)
T 1qor_A          229 LQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKYPL  304 (327)
T ss_dssp             EEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCCCGGGEEEG
T ss_pred             hcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCcccccccCcEEcH
Confidence            9999999999865321 1           11111100          2456899999999999999999  99986

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=8.9e-45  Score=324.12  Aligned_cols=272  Identities=26%  Similarity=0.380  Sum_probs=229.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++.    ++++ +.|.|+|++|||+|||.+++||++|++.+.|.+   +..+|.++|||++|+|+++|++++
T Consensus        24 mkA~v~~~~~~----l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~---~~~~p~v~G~e~~G~V~~vG~~v~   95 (370)
T 4ej6_A           24 MKAVRLESVGN----ISVR-NVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF---PSTPPVTLGHEFCGIVVEAGSAVR   95 (370)
T ss_dssp             EEEEEEEETTE----EEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTSS---CCCSSEECCCSEEEEEEEECTTCC
T ss_pred             eEEEEEecCCc----eEEE-EccCCCCCCCeEEEEEEEEeecHHHHHHHcCCC---CCCCCeecCcceEEEEEEECCCCC
Confidence            89999998875    6998 899999999999999999999999999999975   346789999999999999999999


Q ss_pred             CCCCCCEEEEecCc------------------cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273           81 KFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (284)
                      +|++||||++.+..                  ....+...+|+|+||+++|.+.++++|++++++++| ++.++.|||++
T Consensus        96 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~ta~~~  174 (370)
T 4ej6_A           96 DIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLACCLHG  174 (370)
T ss_dssp             SSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHHHHHH
T ss_pred             CCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHHHHHHH
Confidence            99999999875321                  111234467999999999999999999999998887 66788999999


Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc--------CCC
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED--------LPE  213 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~  213 (284)
                      ++..++++|++|||+|+ |++|++++++|+.+ |+ +|++++++++|.++++++|++.++|++..++.+        ..+
T Consensus       175 l~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~g  252 (370)
T 4ej6_A          175 VDLSGIKAGSTVAILGG-GVIGLLTVQLARLA-GATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPG  252 (370)
T ss_dssp             HHHHTCCTTCEEEEECC-SHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTT
T ss_pred             HHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCC
Confidence            98899999999999995 99999999999996 87 888999999999999999999999987655322        134


Q ss_pred             cccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCC--CCce----------eEEE-eccHHHHHHHHHHHHCCCe--eE
Q 023273          214 KFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT--PPAS----------SFVL-TSDGSILEKLNPYFESGKV--KA  275 (284)
Q Consensus       214 ~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~--~~~~----------~~~~-~~~~~~~~~~~~~~~~g~i--~~  275 (284)
                      ++|++|||+|+   .+.++++|+++|+++.+|....  +..+          ++.. .....+++++++++++|++  ++
T Consensus       253 g~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~  332 (370)
T 4ej6_A          253 GVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATGAIEIDR  332 (370)
T ss_dssp             CEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCTTCHHHHHHHHHTTCSCCGG
T ss_pred             CCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccChHHHHHHHHHHHcCCCChhH
Confidence            89999999995   4889999999999999987643  2111          1111 1134568999999999998  56


Q ss_pred             eecccccC
Q 023273          276 IIDPKGLL  283 (284)
Q Consensus       276 ~i~~~~~~  283 (284)
                      .|+++|||
T Consensus       333 ~i~~~~~l  340 (370)
T 4ej6_A          333 MISRRISL  340 (370)
T ss_dssp             GEEEEECG
T ss_pred             cEEEEEEH
Confidence            79999986

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=4.9e-44  Score=320.03  Aligned_cols=273  Identities=34%  Similarity=0.568  Sum_probs=229.9

Q ss_pred             CeEEEEcccCCCccceEE-eccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCCCC-------------CCCCCCCcccc
Q 023273            1 MKAWVYKEYGNSQSVLKF-ETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFS-------------ATDSPLPTIPG   65 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~-~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~~~-------------~~~~~~p~~~G   65 (284)
                      |||+++..+|.+ ..+++ + +.|.|+| ++|||+|||.+++||++|++.+.|..+             .....+|.++|
T Consensus        22 mka~~~~~~g~~-~~l~~~~-~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v~G   99 (375)
T 2vn8_A           22 SMAWVIDKYGKN-EVLRFTQ-NMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLG   99 (375)
T ss_dssp             EEEEEBSSCCSG-GGCEEEE-EECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBCCC
T ss_pred             ceeEEeccCCCc-cceEEec-cccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCcccc
Confidence            799999999876 56888 7 7888885 999999999999999999999988532             11123789999


Q ss_pred             cceeEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-H
Q 023273           66 YDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-E  144 (284)
Q Consensus        66 ~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~  144 (284)
                      ||++|+|+++|+++++|++||||++...      ...+|+|+||+++|++.++++|++++++++|+++++++|||+++ +
T Consensus       100 ~E~~G~V~~vG~~V~~~~vGDrV~~~~~------~~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~  173 (375)
T 2vn8_A          100 RDVSGVVMECGLDVKYFKPGDEVWAAVP------PWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINK  173 (375)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEEECC------TTSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTT
T ss_pred             eeeeEEEEEeCCCCCCCCCCCEEEEecC------CCCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHH
Confidence            9999999999999999999999998753      12369999999999999999999999999999999999999999 4


Q ss_pred             hcc----cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-C--CCcccE
Q 023273          145 RSA----FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-L--PEKFDV  217 (284)
Q Consensus       145 ~~~----~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~--~~~~d~  217 (284)
                      .++    +++|++|+|+|++|++|++++++|+.. |++|++++ ++++.+.++++|++.+++++..++.+ .  ..++|+
T Consensus       174 ~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~  251 (375)
T 2vn8_A          174 VGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDF  251 (375)
T ss_dssp             TTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSE
T ss_pred             hcccccccCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCE
Confidence            678    899999999999999999999999996 89998887 67899999999999999887654332 1  358999


Q ss_pred             EEeCCCCc----HHHHHhhccCCEEEEEcCCCCC---------------------------CceeEEE---eccHHHHHH
Q 023273          218 VFDAVGQC----DKALKAVKEGGRVVSIIGSVTP---------------------------PASSFVL---TSDGSILEK  263 (284)
Q Consensus       218 vid~~g~~----~~~~~~l~~~G~~v~~g~~~~~---------------------------~~~~~~~---~~~~~~~~~  263 (284)
                      +|||+|+.    ..++++++++|+++.+|.+...                           ....+..   ....+.+++
T Consensus       252 vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  331 (375)
T 2vn8_A          252 ILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDD  331 (375)
T ss_dssp             EEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHH
T ss_pred             EEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEeCCCHHHHHH
Confidence            99999964    6788999999999999864310                           1111111   124578899


Q ss_pred             HHHHHHCCCeeEeecccccC
Q 023273          264 LNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       264 ~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +++++++|++++.|+++|||
T Consensus       332 ~~~l~~~g~l~~~i~~~~~l  351 (375)
T 2vn8_A          332 IAELVDAGKIRPVIEQTFPF  351 (375)
T ss_dssp             HHHHHHTTSCCCCEEEEEEG
T ss_pred             HHHHHHCCCcccCcCeEECH
Confidence            99999999999999999986

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.2e-44  Score=320.51  Aligned_cols=274  Identities=27%  Similarity=0.325  Sum_probs=224.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++..   ++++ +.|.|+|++|||+|||.+++||++|++.+.|.++.....+|.++|||++|+|+++|++ +
T Consensus         4 mka~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~   78 (344)
T 2h6e_A            4 SKAALLKKFSEP---LSIE-DVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-A   78 (344)
T ss_dssp             EEBCEECSCCC---------EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-C
T ss_pred             eEEEEEecCCCC---CeEE-EeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-C
Confidence            899999999854   7888 8899999999999999999999999999998764213357899999999999999999 9


Q ss_pred             CCCCCCEEEEecCc----c--------------ccCCCCCCCceeeEEeee-cCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           81 KFKVGDEVYGDINE----K--------------ALDHPKRNGSLAEYTAVE-ENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~----~--------------~~~~~~~~g~~~~~~~~~-~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      +|++||||++....    +              ...+...+|+|+||+++| ++.++++ ++++++++|.+++++.|||+
T Consensus        79 ~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~  157 (344)
T 2h6e_A           79 KVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMG  157 (344)
T ss_dssp             CCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHH
T ss_pred             CCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHH
Confidence            99999999775321    0              011223579999999999 9999999 99999999999999999999


Q ss_pred             HHHhc-----ccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHcCCcEEeeCCC-cccc-cC--
Q 023273          142 GLERS-----AFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIE-DL--  211 (284)
Q Consensus       142 al~~~-----~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~-~~--  211 (284)
                      ++...     ++ +|++|+|+|+ |++|++++|+|+.++ |++|++++++++|++.++++|++++++++. .++. ..  
T Consensus       158 al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~  235 (344)
T 2h6e_A          158 AIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTD  235 (344)
T ss_dssp             HHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHT
T ss_pred             HHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhc
Confidence            99766     88 9999999996 999999999999831 789999999999999999999999998754 3221 11  


Q ss_pred             CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCce----------eEE--EeccHHHHHHHHHHHHCCCeeEe
Q 023273          212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SFV--LTSDGSILEKLNPYFESGKVKAI  276 (284)
Q Consensus       212 ~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~~--~~~~~~~~~~~~~~~~~g~i~~~  276 (284)
                      ++++|++||++|.   .+.++++|+++|+++.+|.+..+..+          ++.  .....++++++++++++|++++.
T Consensus       236 g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~  315 (344)
T 2h6e_A          236 GLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIKPY  315 (344)
T ss_dssp             TCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCC
T ss_pred             CCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHHHHHHHHHHHHcCCCCcc
Confidence            3489999999996   37899999999999999876432222          111  12247889999999999999999


Q ss_pred             ecccccC
Q 023273          277 IDPKGLL  283 (284)
Q Consensus       277 i~~~~~~  283 (284)
                      | ++|||
T Consensus       316 i-~~~~l  321 (344)
T 2h6e_A          316 I-IKVPL  321 (344)
T ss_dssp             E-EEECC
T ss_pred             e-EEEeH
Confidence            9 99987

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.5e-44  Score=317.43  Aligned_cols=271  Identities=31%  Similarity=0.461  Sum_probs=229.2

Q ss_pred             CeEEEEcccCCCccceEE-eccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKF-ETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~-~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      |||+++.+++.+ +.+++ + +.|.|+|++|||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|+++|+++
T Consensus        30 Mka~~~~~~g~~-~~l~~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~P~v~G~E~~G~V~~vG~~v  106 (351)
T 1yb5_A           30 MRAVRVFEFGGP-EVLKLRS-DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLLPYTPGSDVAGVIEAVGDNA  106 (351)
T ss_dssp             EEEEEESSCSSG-GGEEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC-CCCSSBCCCSCEEEEEEEECTTC
T ss_pred             EEEEEEccCCCc-ceeEEee-ecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCCcCCceeEEEEEEECCCC
Confidence            899999998876 66888 7 78999999999999999999999999999887642 23578999999999999999999


Q ss_pred             CCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEc
Q 023273           80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLG  158 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g  158 (284)
                      ++|++||||++...        .+|+|+||+++|++.++++|++++++++|++++++.|||+++. .+++++|++|+|+|
T Consensus       107 ~~~~vGdrV~~~~~--------~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~G  178 (351)
T 1yb5_A          107 SAFKKGDRVFTSST--------ISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHG  178 (351)
T ss_dssp             TTCCTTCEEEESCC--------SSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEET
T ss_pred             CCCCCCCEEEEeCC--------CCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEEC
Confidence            99999999988642        3699999999999999999999999999999999999999995 78999999999999


Q ss_pred             CCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC--cHHHHH
Q 023273          159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALK  230 (284)
Q Consensus       159 a~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~--~~~~~~  230 (284)
                      ++|++|++++++++.. |++|+++++++++.+.++++|++.+++++..++.+.      .+++|++|||+|.  ...+++
T Consensus       179 asggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~~~~~~~~~  257 (351)
T 1yb5_A          179 ASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLS  257 (351)
T ss_dssp             CSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCChHHHHHHHH
Confidence            8899999999999995 999999999999999999999998888765443221      3489999999985  578899


Q ss_pred             hhccCCEEEEEcCCCC---------CCceeEEEe----ccHHH----HHHHHHHHHCCCeeEeecccccC
Q 023273          231 AVKEGGRVVSIIGSVT---------PPASSFVLT----SDGSI----LEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       231 ~l~~~G~~v~~g~~~~---------~~~~~~~~~----~~~~~----~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +|+++|+++.+|....         ...+++...    ...++    ++.+.+++++|++++.|+++|||
T Consensus       258 ~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l  327 (351)
T 1yb5_A          258 LLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPL  327 (351)
T ss_dssp             HEEEEEEEEECCCCSCEEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCCCCCEEEEEEG
T ss_pred             hccCCCEEEEEecCCCCccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCccCccceEEcH
Confidence            9999999999985421         011222111    12333    45566678899999999999986

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=4.3e-44  Score=320.17  Aligned_cols=273  Identities=23%  Similarity=0.266  Sum_probs=227.3

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++++   ++++ +.|.|+|++|||+|||.+++||++|++.+.|.++   ..+|.++|||++|+|+++|++++
T Consensus        10 mka~~~~~~g~~---l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~P~v~GhE~~G~V~~vG~~v~   82 (373)
T 1p0f_A           10 CKAAVAWEPHKP---LSLE-TITVAPPKAHEVRIKILASGICGSDSSVLKEIIP---SKFPVILGHEAVGVVESIGAGVT   82 (373)
T ss_dssp             EEEEEBSSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC---CCSSBCCCCCEEEEEEEECTTCC
T ss_pred             eEEEEEEcCCCC---eeEE-EeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC---CCCCcccCcCceEEEEEECCCCC
Confidence            899999998865   7898 8899999999999999999999999999998764   45789999999999999999999


Q ss_pred             CCCCCCEEEEecCcc--------------c-cC------CC------------------CCCCceeeEEeeecCceeeCC
Q 023273           81 KFKVGDEVYGDINEK--------------A-LD------HP------------------KRNGSLAEYTAVEENLLALKP  121 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~--------------~-~~------~~------------------~~~g~~~~~~~~~~~~~~~ip  121 (284)
                      +|++||||++.+...              . ..      +.                  ...|+|+||+++|++.++++|
T Consensus        83 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  162 (373)
T 1p0f_A           83 CVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKID  162 (373)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEEC
T ss_pred             ccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEEECC
Confidence            999999998864210              0 00      00                  125999999999999999999


Q ss_pred             CCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcE
Q 023273          122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL  199 (284)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~  199 (284)
                      ++++++ +|++++++.|||+++ +.+++++|++|+|+| +|++|++++|+|+.+ |+ +|++++++++|+++++++|+++
T Consensus       163 ~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~  239 (373)
T 1p0f_A          163 PKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAIELGATE  239 (373)
T ss_dssp             TTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHTTCSE
T ss_pred             CCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCcE
Confidence            999999 999999999999988 578999999999999 699999999999996 87 7999999999999999999999


Q ss_pred             EeeCCC--ccccc-----CCCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCCCCce-----------eEEEe--
Q 023273          200 AIDYTK--ENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPAS-----------SFVLT--  255 (284)
Q Consensus       200 ~~~~~~--~~~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~-----------~~~~~--  255 (284)
                      ++++++  +++.+     ..+++|++||++|.   ...++++|+++ |+++.+|.......+           ++...  
T Consensus       240 vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  319 (373)
T 1p0f_A          240 CLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVF  319 (373)
T ss_dssp             EECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSG
T ss_pred             EEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCceEEeecc
Confidence            998763  22222     13489999999986   37899999999 999999865421111           11111  


Q ss_pred             --ccHHHHHHHHHHHHCCCee--EeecccccC
Q 023273          256 --SDGSILEKLNPYFESGKVK--AIIDPKGLL  283 (284)
Q Consensus       256 --~~~~~~~~~~~~~~~g~i~--~~i~~~~~~  283 (284)
                        ...++++++++++++|+++  +.|+++|||
T Consensus       320 ~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l  351 (373)
T 1p0f_A          320 GGFKGEEVSRLVDDYMKKKINVNFLVSTKLTL  351 (373)
T ss_dssp             GGCCGGGHHHHHHHHHTTSSCGGGGEEEEECG
T ss_pred             CCcCHHHHHHHHHHHHcCCCCchheEEEEeeH
Confidence              1236899999999999987  578999986

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=2.7e-44  Score=316.83  Aligned_cols=272  Identities=24%  Similarity=0.353  Sum_probs=227.9

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCC-CCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      |||+++.++|.+ +.++++ +.|.|+|++|||+|||.+++||++|++.+.|.+ +.....+|.++|||++|+|+++|+++
T Consensus         2 Mka~~~~~~g~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v   79 (333)
T 1wly_A            2 VMAAVIHKKGGP-DNFVWE-EVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGV   79 (333)
T ss_dssp             CEEEEESSCSSG-GGEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTC
T ss_pred             cEEEEEcccCCc-ceeEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCC
Confidence            899999999876 668998 889999999999999999999999999998865 21113578999999999999999999


Q ss_pred             CCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHh--hhcccchHHHHHHHHH-hcccCCCCEEEE
Q 023273           80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVE--AASLPLATETAYEGLE-RSAFSAGKSILV  156 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~--aa~~~~~~~ta~~al~-~~~~~~g~~vlI  156 (284)
                      ++|++||||+....        ..|+|+||+++|++.++++|+++++++  +|+++.+++|||+++. .+++++|++|+|
T Consensus        80 ~~~~~GdrV~~~~~--------~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV  151 (333)
T 1wly_A           80 TDFTVGERVCTCLP--------PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLI  151 (333)
T ss_dssp             CSCCTTCEEEECSS--------SCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEE
T ss_pred             CCCCCCCEEEEecC--------CCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEE
Confidence            99999999977531        259999999999999999999999999  8999999999999995 789999999999


Q ss_pred             EcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC--cHHH
Q 023273          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKA  228 (284)
Q Consensus       157 ~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~--~~~~  228 (284)
                      +|++|++|++++++++.. |++|+++++++++.+.++++|++.+++.+..++.+.      .+++|++|||+|.  .+.+
T Consensus       152 ~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~~~~~~~  230 (333)
T 1wly_A          152 HAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKS  230 (333)
T ss_dssp             TTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCTTTHHHH
T ss_pred             ECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcHHHHHHH
Confidence            999999999999999995 899999999999999999999988888765443221      3579999999995  5889


Q ss_pred             HHhhccCCEEEEEcCCCC-CCce--e---------EEEec-------c----HHHHHHHHHHHHCCCeeEeecccccC
Q 023273          229 LKAVKEGGRVVSIIGSVT-PPAS--S---------FVLTS-------D----GSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       229 ~~~l~~~G~~v~~g~~~~-~~~~--~---------~~~~~-------~----~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +++|+++|+++.+|.... +..+  .         .++..       .    .+.++++++++++|++++.|+++|||
T Consensus       231 ~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l  308 (333)
T 1wly_A          231 LDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSSVAKTFPL  308 (333)
T ss_dssp             HHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCCCEEEEEEG
T ss_pred             HHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcCCCcceEEeH
Confidence            999999999999986541 1111  0         21111       1    24789999999999999999999986

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.5e-44  Score=320.08  Aligned_cols=273  Identities=25%  Similarity=0.330  Sum_probs=226.4

Q ss_pred             CeEEEEcccCCCccceEEeccccCCC-CCCCeEEEEEeEeecCHHHHHHHcCCCCC-CCCCCCcccccceeEEEEEeCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPS-LREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGSQ   78 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~-~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~   78 (284)
                      |||+++.+++..   ++++ +.|.|+ |++|||+|||.+++||++|++.+.|.++. ....+|.++|||++|+|+++|++
T Consensus        16 mka~~~~~~g~~---l~~~-~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~   91 (359)
T 1h2b_A           16 LKAARLHEYNKP---LRIE-DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEG   91 (359)
T ss_dssp             -CEEEESSTTSC---CEEE-CCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTT
T ss_pred             ceEEEEecCCCC---cEEE-EccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCC
Confidence            899999999855   7898 899999 99999999999999999999999886531 02357899999999999999999


Q ss_pred             CCCCCCCCEEEEecCc------------------cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhh---cccchHH
Q 023273           79 VKKFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAA---SLPLATE  137 (284)
Q Consensus        79 ~~~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa---~~~~~~~  137 (284)
                      +++|++||||+++...                  ....+...+|+|+||+++|++.++++|++++++++|   .+++++.
T Consensus        92 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~  171 (359)
T 1h2b_A           92 VEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGI  171 (359)
T ss_dssp             CCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHH
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhccchhhhHH
Confidence            9999999999876421                  011122357999999999999999999999999998   7888999


Q ss_pred             HHHHHHHh--cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C
Q 023273          138 TAYEGLER--SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L  211 (284)
Q Consensus       138 ta~~al~~--~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~  211 (284)
                      |||+++..  .++++|++|+|+|+ |++|++++|+|+.++|++|++++++++|++.++++|+++++|+++. +.+    .
T Consensus       172 ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-~~~~v~~~  249 (359)
T 1h2b_A          172 TAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD-PVKQVMEL  249 (359)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSC-HHHHHHHH
T ss_pred             HHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccch-HHHHHHHH
Confidence            99999976  89999999999996 9999999999998427899999999999999999999999998754 222    2


Q ss_pred             --CCcccEEEeCCCCc-----HHHHHhhccCCEEEEEcCCCCCCcee----------EE--EeccHHHHHHHHHHHHCCC
Q 023273          212 --PEKFDVVFDAVGQC-----DKALKAVKEGGRVVSIIGSVTPPASS----------FV--LTSDGSILEKLNPYFESGK  272 (284)
Q Consensus       212 --~~~~d~vid~~g~~-----~~~~~~l~~~G~~v~~g~~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~g~  272 (284)
                        ++++|++||++|+.     ..++++  ++|+++.+|.+..+ .++          +.  .....++++++++++++|+
T Consensus       250 ~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~  326 (359)
T 1h2b_A          250 TRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGK  326 (359)
T ss_dssp             TTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTS
T ss_pred             hCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCC
Confidence              33899999999964     345555  89999999876432 221          11  1224688999999999999


Q ss_pred             eeEeecccccC
Q 023273          273 VKAIIDPKGLL  283 (284)
Q Consensus       273 i~~~i~~~~~~  283 (284)
                      +++.| ++|||
T Consensus       327 l~~~i-~~~~l  336 (359)
T 1h2b_A          327 VRVEV-DIHKL  336 (359)
T ss_dssp             CCCCE-EEEEG
T ss_pred             CcceE-EEEeH
Confidence            99999 99986

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=2.8e-45  Score=325.05  Aligned_cols=272  Identities=22%  Similarity=0.251  Sum_probs=226.4

Q ss_pred             CeEEEEc--ccC-CCccceEEeccc---------cCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccce
Q 023273            1 MKAWVYK--EYG-NSQSVLKFETNV---------EVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDV   68 (284)
Q Consensus         1 m~a~~~~--~~g-~~~~~~~~~~~~---------~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~   68 (284)
                      |||++++  +++ .+ +.++++ +.         |.|+|++|||+|||.+++||++|++.+.|.++. ..++|.++|||+
T Consensus        11 mka~~~~~~~~~~~~-~~l~~~-~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~p~v~G~E~   87 (349)
T 3pi7_A           11 MKALLLVGDGYTKTP-SGSALE-AMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQ-PRVKGRPAGFEG   87 (349)
T ss_dssp             EEEEEECSCBSCSSC-CCSCCC-CSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSS-CBCTTSBCCSEE
T ss_pred             heEEEEEccccCCCc-ccceEE-EeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCC-CCCCCCCccceE
Confidence            8999999  542 33 457888 78         999999999999999999999999999997642 346789999999


Q ss_pred             eEEEEEeCCCC-CCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcc
Q 023273           69 AGVVEKVGSQV-KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA  147 (284)
Q Consensus        69 ~G~V~~vG~~~-~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~  147 (284)
                      +|+|+++|+++ ++|++||||++..+      ...+|+|+||+++|++.++++|++++++++|++++.++|||++++.++
T Consensus        88 ~G~V~~vG~~v~~~~~vGdrV~~~~g------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~  161 (349)
T 3pi7_A           88 VGTIVAGGDEPYAKSLVGKRVAFATG------LSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVK  161 (349)
T ss_dssp             EEEEEEECSSHHHHHHTTCEEEEECT------TSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHHHHHH
T ss_pred             EEEEEEECCCccCCCCCCCEEEEecc------CCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHHHHHh
Confidence            99999999999 99999999998752      245799999999999999999999999999999999999998777766


Q ss_pred             cCCC-CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEe
Q 023273          148 FSAG-KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFD  220 (284)
Q Consensus       148 ~~~g-~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid  220 (284)
                       +++ ++|+|+|++|++|++++++|+.. |++|++++++++|++.++++|+++++|++..++.+.      ++++|++||
T Consensus       162 -~~g~~~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid  239 (349)
T 3pi7_A          162 -QEGEKAFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLD  239 (349)
T ss_dssp             -HHCCSEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEE
T ss_pred             -hCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEE
Confidence             666 79999988999999999999996 999999999999999999999999999876554432      248999999


Q ss_pred             CCCC--cHHHHHhhccCCEEEEEcCCCC-CCc-----------eeEEEec-----------cHHHHHHHHHHHHCCCeeE
Q 023273          221 AVGQ--CDKALKAVKEGGRVVSIIGSVT-PPA-----------SSFVLTS-----------DGSILEKLNPYFESGKVKA  275 (284)
Q Consensus       221 ~~g~--~~~~~~~l~~~G~~v~~g~~~~-~~~-----------~~~~~~~-----------~~~~~~~~~~~~~~g~i~~  275 (284)
                      |+|+  ...++++|+++|+++.+|.... +..           +.+....           ..++++++++++++|+|++
T Consensus       240 ~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  319 (349)
T 3pi7_A          240 AVTGPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWST  319 (349)
T ss_dssp             SSCHHHHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC
T ss_pred             CCCChhHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCccc
Confidence            9996  4789999999999999986431 111           1111111           1467889999999999999


Q ss_pred             eecccccC
Q 023273          276 IIDPKGLL  283 (284)
Q Consensus       276 ~i~~~~~~  283 (284)
                      .|+++|||
T Consensus       320 ~i~~~~~l  327 (349)
T 3pi7_A          320 DVTAVVPL  327 (349)
T ss_dssp             -CCEEEEH
T ss_pred             ccceEEcH
Confidence            99999986

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=5.3e-44  Score=319.70  Aligned_cols=274  Identities=24%  Similarity=0.310  Sum_probs=228.0

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++.+   ++++ +.|.|+|++|||+|||.+++||++|++.+.|.++.   .+|.++|||++|+|+++|++++
T Consensus         9 mkA~~~~~~g~~---l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~P~v~GhE~~G~V~~vG~~v~   81 (374)
T 2jhf_A            9 CKAAVLWEEKKP---FSIE-EVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT---PLPVIAGHEAAGIVESIGEGVT   81 (374)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---CSSBCCCCSEEEEEEEECTTCC
T ss_pred             EEEEEEecCCCc---eEEE-EccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCC---CCCcccCcCceEEEEEECCCCC
Confidence            899999999865   7898 88999999999999999999999999999987542   3789999999999999999999


Q ss_pred             CCCCCCEEEEecCcc--------------c-cC------CC------------------CCCCceeeEEeeecCceeeCC
Q 023273           81 KFKVGDEVYGDINEK--------------A-LD------HP------------------KRNGSLAEYTAVEENLLALKP  121 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~--------------~-~~------~~------------------~~~g~~~~~~~~~~~~~~~ip  121 (284)
                      +|++||||++.+...              . ..      +.                  ...|+|+||+++|++.++++|
T Consensus        82 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  161 (374)
T 2jhf_A           82 TVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID  161 (374)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECC
Confidence            999999998864210              0 00      00                  125999999999999999999


Q ss_pred             CCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcE
Q 023273          122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL  199 (284)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~  199 (284)
                      ++++++++|++++++.|||+++ +.+++++|++|+|+| +|++|++++++|+.+ |+ +|++++++++|++.++++|+++
T Consensus       162 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~  239 (374)
T 2jhf_A          162 AASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAKEVGATE  239 (374)
T ss_dssp             TTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCSE
T ss_pred             CCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCce
Confidence            9999999999999999999998 578999999999999 699999999999996 88 7999999999999999999999


Q ss_pred             EeeCCC--ccccc-----CCCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCCCCce-----------eEEEec-
Q 023273          200 AIDYTK--ENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPAS-----------SFVLTS-  256 (284)
Q Consensus       200 ~~~~~~--~~~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~-----------~~~~~~-  256 (284)
                      ++++++  +++.+     ..+++|++||++|.   ...++++|+++ |+++.+|.......+           ++.... 
T Consensus       240 vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  319 (374)
T 2jhf_A          240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIF  319 (374)
T ss_dssp             EECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSG
T ss_pred             EecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCCeEEEecc
Confidence            998763  22222     13489999999996   37899999999 999999865421111           111111 


Q ss_pred             ----cHHHHHHHHHHHHCCCee--EeecccccC
Q 023273          257 ----DGSILEKLNPYFESGKVK--AIIDPKGLL  283 (284)
Q Consensus       257 ----~~~~~~~~~~~~~~g~i~--~~i~~~~~~  283 (284)
                          ..++++++++++++|+++  +.|+++|||
T Consensus       320 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l  352 (374)
T 2jhf_A          320 GGFKSKDSVPKLVADFMAKKFALDPLITHVLPF  352 (374)
T ss_dssp             GGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG
T ss_pred             CCCChHHHHHHHHHHHHcCCCCchhheEEEEeH
Confidence                257899999999999987  578999986

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=3.6e-44  Score=318.47  Aligned_cols=270  Identities=28%  Similarity=0.424  Sum_probs=228.4

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC-
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV-   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~-   79 (284)
                      ||++++..+|.+ +.++++ +.|.|+|++|||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|+++|+++ 
T Consensus        23 Mka~~~~~~g~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~p~v~G~E~~G~V~~vG~~v~   99 (354)
T 2j8z_A           23 MLAVHFDKPGGP-ENLYVK-EVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP-PPGASNILGLEASGHVAELGPGCQ   99 (354)
T ss_dssp             EEEEEESSCSSG-GGEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-CTTSCSSSCSEEEEEEEEECSCC-
T ss_pred             eeEEEEccCCCc-cceEEe-ecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCC-CCCCCcccceeeEEEEEEECCCcC
Confidence            899999999976 668998 88999999999999999999999999999987643 23568999999999999999999 


Q ss_pred             CCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEc
Q 023273           80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLG  158 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g  158 (284)
                      ++|++||||++...         .|+|+||+++|++.++++|++++++++|+++++++|||+++ +.+++++|++|+|+|
T Consensus       100 ~~~~vGdrV~~~~~---------~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~G  170 (354)
T 2j8z_A          100 GHWKIGDTAMALLP---------GGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHA  170 (354)
T ss_dssp             -CCCTTCEEEEECS---------SCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESS
T ss_pred             CCCCCCCEEEEecC---------CCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEEC
Confidence            99999999998743         59999999999999999999999999999999999999999 678999999999999


Q ss_pred             CCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC--cHHHHH
Q 023273          159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALK  230 (284)
Q Consensus       159 a~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~--~~~~~~  230 (284)
                      ++|++|++++++++.. |++|+++++++++.+.++++|++.++++...++.+.      .+++|++|||+|+  ...+++
T Consensus       171 a~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~  249 (354)
T 2j8z_A          171 GLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVN  249 (354)
T ss_dssp             TTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCGGGHHHHHH
T ss_pred             CccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCchHHHHHHH
Confidence            9999999999999995 999999999999999999999998888765443221      3479999999996  478899


Q ss_pred             hhccCCEEEEEcCCCCC-Cc-----------eeEEEe---ccH---------HHHHHHHHHHHCC---CeeEeecccccC
Q 023273          231 AVKEGGRVVSIIGSVTP-PA-----------SSFVLT---SDG---------SILEKLNPYFESG---KVKAIIDPKGLL  283 (284)
Q Consensus       231 ~l~~~G~~v~~g~~~~~-~~-----------~~~~~~---~~~---------~~~~~~~~~~~~g---~i~~~i~~~~~~  283 (284)
                      +|+++|+++.+|..... ..           +++...   ...         +.++++++++++|   ++++.|+++|||
T Consensus       250 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l  329 (354)
T 2j8z_A          250 CLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPV  329 (354)
T ss_dssp             HEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEG
T ss_pred             hccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcH
Confidence            99999999999865421 11           111111   111         1234688999999   999999999986

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=4.8e-44  Score=319.91  Aligned_cols=275  Identities=27%  Similarity=0.318  Sum_probs=228.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++++   ++++ +.|.|+|++|||+|||.+++||++|++.+.|.++.  ..+|.++|||++|+|+++|++++
T Consensus         7 mkA~~~~~~~~~---l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~P~v~GhE~~G~V~~vG~~V~   80 (373)
T 2fzw_A            7 CKAAVAWEAGKP---LSIE-EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPE--GCFPVILGHLGAGIVESVGEGVT   80 (373)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTT--CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             eEEEEEecCCCC---cEEE-EeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCC--CCCCccccccccEEEEEECCCCC
Confidence            899999998865   7888 88999999999999999999999999999987542  35789999999999999999999


Q ss_pred             CCCCCCEEEEecCccc------------------------c---------------CCCCCCCceeeEEeeecCceeeCC
Q 023273           81 KFKVGDEVYGDINEKA------------------------L---------------DHPKRNGSLAEYTAVEENLLALKP  121 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~------------------------~---------------~~~~~~g~~~~~~~~~~~~~~~ip  121 (284)
                      +|++||||++.+....                        .               .+....|+|+||+++|++.++++|
T Consensus        81 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  160 (373)
T 2fzw_A           81 KLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKID  160 (373)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECC
Confidence            9999999988642100                        0               000125999999999999999999


Q ss_pred             CCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcE
Q 023273          122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL  199 (284)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~  199 (284)
                      ++++++++|++++++.|||+++ +..++++|++|||+| +|++|++++|+|+.+ |+ +|++++++++|++.++++|+++
T Consensus       161 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~avqla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~  238 (373)
T 2fzw_A          161 PLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFG-LGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEFGATE  238 (373)
T ss_dssp             TTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHHTCSE
T ss_pred             CCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCce
Confidence            9999999999999999999998 578999999999999 699999999999996 87 7999999999999999999999


Q ss_pred             EeeCCC--ccccc-----CCCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCCCCce-----------eEEEe--
Q 023273          200 AIDYTK--ENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPAS-----------SFVLT--  255 (284)
Q Consensus       200 ~~~~~~--~~~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~-----------~~~~~--  255 (284)
                      ++++++  .++.+     ..+++|++||++|.   .+.++++|+++ |+++.+|.......+           ++...  
T Consensus       239 vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  318 (373)
T 2fzw_A          239 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAF  318 (373)
T ss_dssp             EECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSG
T ss_pred             EeccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCCEEEEecc
Confidence            998763  22222     13489999999996   37899999999 999999865421111           11111  


Q ss_pred             c---cHHHHHHHHHHHHCCCee--EeecccccC
Q 023273          256 S---DGSILEKLNPYFESGKVK--AIIDPKGLL  283 (284)
Q Consensus       256 ~---~~~~~~~~~~~~~~g~i~--~~i~~~~~~  283 (284)
                      .   ..++++++++++++|+++  +.|+++|||
T Consensus       319 ~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l  351 (373)
T 2fzw_A          319 GGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSF  351 (373)
T ss_dssp             GGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEG
T ss_pred             CCCCcHHHHHHHHHHHHcCCCCchheEeEEeeH
Confidence            1   257899999999999987  578999986

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=6.1e-44  Score=317.39  Aligned_cols=272  Identities=25%  Similarity=0.365  Sum_probs=225.3

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++.++|.+.+.++++ +.|.|+|++|||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus        27 mka~~~~~~g~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~P~v~G~E~~G~V~~vG~~v~  104 (357)
T 1zsy_A           27 VRALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGL-LPELPAVGGNEGVAQVVAVGSNVT  104 (357)
T ss_dssp             EEEEEESSSSCHHHHEEEE-EECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC-CCCSSEECCSCCEEEEEEECTTCC
T ss_pred             hEEEEEecCCCccceEEEe-eccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCC-CCCCCccccceEEEEEEEeCCCCC
Confidence            8999999998752347888 88999999999999999999999999999987642 225789999999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga  159 (284)
                      +|++||||++...        .+|+|+||+++|++.++++|++++++++|+++++++|||+++ +.+++++|++|||+|+
T Consensus       105 ~~~vGdrV~~~~~--------~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga  176 (357)
T 1zsy_A          105 GLKPGDWVIPANA--------GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNAS  176 (357)
T ss_dssp             SCCTTCEEEESSS--------CSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESST
T ss_pred             CCCCCCEEEEcCC--------CCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCC
Confidence            9999999998642        269999999999999999999999999999999999999999 4589999999999998


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChh----hHHHHHHcCCcEEeeCCC---cccccCC---CcccEEEeCCCC--cHH
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTA----KLDLLRSLGADLAIDYTK---ENIEDLP---EKFDVVFDAVGQ--CDK  227 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~----~~~~~~~~g~~~~~~~~~---~~~~~~~---~~~d~vid~~g~--~~~  227 (284)
                      +|++|++++|+|+.+ |+++++++.+++    +.+.++++|+++++++++   +.+.+..   .++|++|||+|+  ...
T Consensus       177 ~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid~~g~~~~~~  255 (357)
T 1zsy_A          177 NSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTE  255 (357)
T ss_dssp             TSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEESSCHHHHHH
T ss_pred             cCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEECCCcHHHHH
Confidence            899999999999996 998888876432    567889999999998643   2222322   259999999996  367


Q ss_pred             HHHhhccCCEEEEEcCCCC-CC----------ceeEEEec------------cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          228 ALKAVKEGGRVVSIIGSVT-PP----------ASSFVLTS------------DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       228 ~~~~l~~~G~~v~~g~~~~-~~----------~~~~~~~~------------~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      ++++++++|+++.+|.... +.          .+++....            ..+.++++++++++|++++.+.++|||
T Consensus       256 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l  334 (357)
T 1zsy_A          256 LLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPL  334 (357)
T ss_dssp             HHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEG
T ss_pred             HHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCccceEEcH
Confidence            8999999999999975431 11          12221110            124678999999999999988899986

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=4.3e-44  Score=317.25  Aligned_cols=277  Identities=29%  Similarity=0.374  Sum_probs=233.1

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC------CCCCCCcccccceeEEEEE
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA------TDSPLPTIPGYDVAGVVEK   74 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~------~~~~~p~~~G~e~~G~V~~   74 (284)
                      |||+++.+++.+   ++++ +.|.|+|++|||+|||.+++||++|++.+.|.++.      ....+|.++|||++|+|++
T Consensus         1 Mka~~~~~~g~~---l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   76 (347)
T 1jvb_A            1 MRAVRLVEIGKP---LSLQ-EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEE   76 (347)
T ss_dssp             CEEEEECSTTSC---CEEE-ECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEE
T ss_pred             CeEEEEecCCCC---eEEE-EeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEE
Confidence            999999999865   7898 88999999999999999999999999999886541      1235789999999999999


Q ss_pred             eCCCCCCCCCCCEEEEecC----cc--------------ccCCCCCCCceeeEEeeec-CceeeCCCCCCHHhhhcccch
Q 023273           75 VGSQVKKFKVGDEVYGDIN----EK--------------ALDHPKRNGSLAEYTAVEE-NLLALKPKNLSFVEAASLPLA  135 (284)
Q Consensus        75 vG~~~~~~~~Gd~V~~~~~----~~--------------~~~~~~~~g~~~~~~~~~~-~~~~~ip~~~~~~~aa~~~~~  135 (284)
                      +|+++++|++||||++...    .+              ...+...+|+|+||+++|+ +.++++ ++++++++|.++++
T Consensus        77 vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~  155 (347)
T 1jvb_A           77 VGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCS  155 (347)
T ss_dssp             ECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTH
T ss_pred             ECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhh
Confidence            9999999999999976531    11              0112235799999999999 999999 99999999999999


Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccc----ccC
Q 023273          136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI----EDL  211 (284)
Q Consensus       136 ~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~  211 (284)
                      +.|||++++..++++|++|+|+|++|++|++++++++..+|++|+++++++++.+.++++|++.++++.+.++    .+.
T Consensus       156 ~~ta~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  235 (347)
T 1jvb_A          156 GITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRI  235 (347)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHH
Confidence            9999999988999999999999987799999999999832889999999999999999999998888765443    122


Q ss_pred             -C-CcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCC-CCCcee----------EE--EeccHHHHHHHHHHHHCCCe
Q 023273          212 -P-EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV-TPPASS----------FV--LTSDGSILEKLNPYFESGKV  273 (284)
Q Consensus       212 -~-~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~-~~~~~~----------~~--~~~~~~~~~~~~~~~~~g~i  273 (284)
                       . +++|++||++|.   .+.++++|+++|+++.+|.+. .+ .++          +.  .....++++++++++++|++
T Consensus       236 ~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l  314 (347)
T 1jvb_A          236 TESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKV  314 (347)
T ss_dssp             TTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHHTTSS
T ss_pred             hcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccCHHHHHHHHHHHHcCCC
Confidence             2 589999999996   378899999999999998765 32 222          11  11246889999999999999


Q ss_pred             eEeecccccC
Q 023273          274 KAIIDPKGLL  283 (284)
Q Consensus       274 ~~~i~~~~~~  283 (284)
                      ++.|+++|||
T Consensus       315 ~~~i~~~~~l  324 (347)
T 1jvb_A          315 KPMITKTMKL  324 (347)
T ss_dssp             CCCCEEEEEG
T ss_pred             CceEEEEEcH
Confidence            9999999986

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.3e-44  Score=320.77  Aligned_cols=275  Identities=25%  Similarity=0.319  Sum_probs=228.1

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcC-CCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLG-AFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g-~~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      |||+++.+++..   ++++ +.|.|+|++|||+|||.+++||++|++.+.| .++.....+|.++|||++|+|+++|+++
T Consensus         5 mka~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v   80 (348)
T 2d8a_A            5 MVAIMKTKPGYG---AELV-EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGV   80 (348)
T ss_dssp             EEEEEECSSSSS---CEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTC
T ss_pred             ceEEEEECCCCC---EEEE-ECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCC
Confidence            799999999843   6898 8999999999999999999999999999988 4321113578999999999999999999


Q ss_pred             CCCCCCCEEEEecCcc------------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           80 KKFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      ++|++||||++.+...                  ...+...+|+|+||+++|++.++++|++++++++|++. ++.|||+
T Consensus        81 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta~~  159 (348)
T 2d8a_A           81 EGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLGNAVD  159 (348)
T ss_dssp             CSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-HHHHHHH
T ss_pred             CcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-HHHHHHH
Confidence            9999999998864210                  01122357999999999999999999999999998775 7789999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEK  214 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~  214 (284)
                      +++..++ +|++|+|+|+ |++|++++++|+.+ |+ +|+++++++++++.++++|++++++++..++.+    .  +++
T Consensus       160 ~l~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g  236 (348)
T 2d8a_A          160 TVLAGPI-SGKSVLITGA-GPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNG  236 (348)
T ss_dssp             HHTTSCC-TTCCEEEECC-SHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSC
T ss_pred             HHHhcCC-CCCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCC
Confidence            9988888 9999999997 99999999999996 88 999999999999999999999999887554332    1  347


Q ss_pred             ccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCce-----------eEEE--ecc-HHHHHHHHHHHHCCCe--eE
Q 023273          215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS-----------SFVL--TSD-GSILEKLNPYFESGKV--KA  275 (284)
Q Consensus       215 ~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~-----------~~~~--~~~-~~~~~~~~~~~~~g~i--~~  275 (284)
                      +|++||++|.   .+.++++|+++|+++.+|....+..+           ++..  ... .++++++++++++|++  ++
T Consensus       237 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~~~  316 (348)
T 2d8a_A          237 VDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDP  316 (348)
T ss_dssp             EEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHHHTCCCCTT
T ss_pred             CCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHHcCCCChHH
Confidence            9999999996   37899999999999999875432211           1211  123 6889999999999995  67


Q ss_pred             eeccccc-C
Q 023273          276 IIDPKGL-L  283 (284)
Q Consensus       276 ~i~~~~~-~  283 (284)
                      .|+++|| |
T Consensus       317 ~i~~~~~gl  325 (348)
T 2d8a_A          317 IITHKYKGF  325 (348)
T ss_dssp             TEEEEEESS
T ss_pred             hheeeCCCH
Confidence            8999998 6

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-43  Score=314.16  Aligned_cols=276  Identities=24%  Similarity=0.353  Sum_probs=230.6

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++..   ++++ +.|.|+|++|||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus         6 mka~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~G~E~~G~V~~vG~~v~   80 (347)
T 2hcy_A            6 QKGVIFYESHGK---LEYK-DIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPL-PVKLPLVGGHEGAGVVVGMGENVK   80 (347)
T ss_dssp             EEEEEESSTTCC---CEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS-CCCSSEECCCEEEEEEEEECTTCC
T ss_pred             cEEEEEeCCCCC---CEEE-EeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCC-CCCCCcccCccceEEEEEECCCCC
Confidence            899999999854   7898 89999999999999999999999999999987642 235789999999999999999999


Q ss_pred             CCCCCCEEEEec-----Cccc--------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           81 KFKVGDEVYGDI-----NEKA--------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        81 ~~~~Gd~V~~~~-----~~~~--------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      +|++||||++.+     +.+.              ..+...+|+|+||+++|++.++++|++++++++|++++++.|||+
T Consensus        81 ~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  160 (347)
T 2hcy_A           81 GWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYK  160 (347)
T ss_dssp             SCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHH
T ss_pred             CCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHH
Confidence            999999998642     2110              012335799999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCC-CcccccC-----CCcc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYT-KENIEDL-----PEKF  215 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~-----~~~~  215 (284)
                      ++...++++|++|+|+|++|++|++++++++.. |++|+++++++++.+.++++|++.++|.. .+++.+.     .+++
T Consensus       161 ~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~  239 (347)
T 2hcy_A          161 ALKSANLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGA  239 (347)
T ss_dssp             HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCE
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCC
Confidence            998779999999999998899999999999995 89999999999999999999998888865 3333221     2389


Q ss_pred             cEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCC-Cc----------eeEE--EeccHHHHHHHHHHHHCCCeeEeecc
Q 023273          216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP-PA----------SSFV--LTSDGSILEKLNPYFESGKVKAIIDP  279 (284)
Q Consensus       216 d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~-~~----------~~~~--~~~~~~~~~~~~~~~~~g~i~~~i~~  279 (284)
                      |++||++|.   .+.++++|+++|+++.+|..... ..          +++.  .....++++++++++++|++++.+ +
T Consensus       240 D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~-~  318 (347)
T 2hcy_A          240 HGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSPI-K  318 (347)
T ss_dssp             EEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHHHHHHTTSCCCCE-E
T ss_pred             CEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHHHHHHhCCCccce-E
Confidence            999999996   37889999999999999876421 11          1111  122468899999999999999875 6


Q ss_pred             cccC
Q 023273          280 KGLL  283 (284)
Q Consensus       280 ~~~~  283 (284)
                      +|||
T Consensus       319 ~~~l  322 (347)
T 2hcy_A          319 VVGL  322 (347)
T ss_dssp             EEEG
T ss_pred             EEcH
Confidence            8886

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=1.1e-43  Score=317.98  Aligned_cols=274  Identities=23%  Similarity=0.276  Sum_probs=227.4

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++.+   ++++ +.|.|+|++|||+|||.+++||++|++.+.|. +  ..++|.++|||++|+|+++|++++
T Consensus         9 mka~~~~~~g~~---l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~--~~~~P~v~GhE~~G~V~~vG~~v~   81 (376)
T 1e3i_A            9 CKAAIAWKTGSP---LCIE-EIEVSPPKACEVRIQVIATCVCPTDINATDPK-K--KALFPVVLGHECAGIVESVGPGVT   81 (376)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-S--CCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             eeEEEEecCCCC---eEEE-EeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-C--CCCCCcccCccccEEEEEECCCCc
Confidence            899999998865   7888 88999999999999999999999999998885 2  235789999999999999999999


Q ss_pred             CCCCCCEEEEecCcc---------------ccC----------CC------------------CCCCceeeEEeeecCce
Q 023273           81 KFKVGDEVYGDINEK---------------ALD----------HP------------------KRNGSLAEYTAVEENLL  117 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~---------------~~~----------~~------------------~~~g~~~~~~~~~~~~~  117 (284)
                      +|++||||++.+...               ...          +.                  ...|+|+||+++|++.+
T Consensus        82 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  161 (376)
T 1e3i_A           82 NFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL  161 (376)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             cCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccccE
Confidence            999999998864210               000          00                  12499999999999999


Q ss_pred             eeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHc
Q 023273          118 ALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSL  195 (284)
Q Consensus       118 ~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~  195 (284)
                      +++|++++++++|++++++.|||+++ +.+++++|++|+|+| +|++|++++|+|+.+ |+ +|++++++++|++.++++
T Consensus       162 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l  239 (376)
T 1e3i_A          162 ARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKAL  239 (376)
T ss_dssp             EECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHT
T ss_pred             EECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHh
Confidence            99999999999999999999999998 578999999999999 699999999999996 88 799999999999999999


Q ss_pred             CCcEEeeCCC--ccccc-----CCCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCCCCce---------eEEEe
Q 023273          196 GADLAIDYTK--ENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPAS---------SFVLT  255 (284)
Q Consensus       196 g~~~~~~~~~--~~~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~---------~~~~~  255 (284)
                      |+++++|+++  +++.+     ..+++|++||++|.   ...++++|+++ |+++.+|.+..+..+         ++...
T Consensus       240 Ga~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~i~g~  319 (376)
T 1e3i_A          240 GATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSINGT  319 (376)
T ss_dssp             TCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTCEEEEC
T ss_pred             CCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccCeEEEE
Confidence            9999998763  22222     13489999999996   37899999999 999999874321111         11111


Q ss_pred             c-----cHHHHHHHHHHHHCCCee--EeecccccC
Q 023273          256 S-----DGSILEKLNPYFESGKVK--AIIDPKGLL  283 (284)
Q Consensus       256 ~-----~~~~~~~~~~~~~~g~i~--~~i~~~~~~  283 (284)
                      .     ..++++++++++++|+|+  +.|+++|||
T Consensus       320 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l  354 (376)
T 1e3i_A          320 FFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF  354 (376)
T ss_dssp             SGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEG
T ss_pred             ecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecH
Confidence            1     257899999999999987  578999986

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.7e-44  Score=318.30  Aligned_cols=274  Identities=22%  Similarity=0.285  Sum_probs=228.2

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHH-HHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFK-RMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~-~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      |||+++.+++++   ++++ +.|.|+|++|||+|||.+++||++|++ .+.|.++   ..+|.++|||++|+|+++|+++
T Consensus         9 mka~~~~~~~~~---l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~---~~~P~v~GhE~~G~V~~vG~~V   81 (374)
T 1cdo_A            9 CKAAVAWEANKP---LVIE-EIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK---DGFPVVLGHEGAGIVESVGPGV   81 (374)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT---TSCSEECCCCEEEEEEEECTTC
T ss_pred             eEEEEEecCCCC---eEEE-EeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC---CCCCcccCccceEEEEEECCCC
Confidence            899999998865   7888 889999999999999999999999999 8888754   4578999999999999999999


Q ss_pred             CCCCCCCEEEEecCccc-----------cC----------CC------------------CCCCceeeEEeeecCceeeC
Q 023273           80 KKFKVGDEVYGDINEKA-----------LD----------HP------------------KRNGSLAEYTAVEENLLALK  120 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~-----------~~----------~~------------------~~~g~~~~~~~~~~~~~~~i  120 (284)
                      ++|++||||++.+....           ..          +.                  ...|+|+||+++|++.++++
T Consensus        82 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~  161 (374)
T 1cdo_A           82 TEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKI  161 (374)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEEC
T ss_pred             ccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEEC
Confidence            99999999988642100           00          00                  02489999999999999999


Q ss_pred             CCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCc
Q 023273          121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD  198 (284)
Q Consensus       121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~  198 (284)
                      |++++++++|++++++.|||+++ +.+++++|++|||+| +|++|++++++|+.+ |+ +|++++++++|++.++++|++
T Consensus       162 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~  239 (374)
T 1cdo_A          162 DPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFG-LGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKVFGAT  239 (374)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCC
T ss_pred             CCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhCCc
Confidence            99999999999999999999988 578999999999999 699999999999996 88 799999999999999999999


Q ss_pred             EEeeCCC--cccccC-----CCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCC-CCce---------eEEEe--
Q 023273          199 LAIDYTK--ENIEDL-----PEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVT-PPAS---------SFVLT--  255 (284)
Q Consensus       199 ~~~~~~~--~~~~~~-----~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~-~~~~---------~~~~~--  255 (284)
                      +++++++  .++.+.     .+++|++||++|.   .+.++++|+++ |+++.+|.... +..+         .+...  
T Consensus       240 ~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~  319 (374)
T 1cdo_A          240 DFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMF  319 (374)
T ss_dssp             EEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSG
T ss_pred             eEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCCeEEEEec
Confidence            9998763  222221     3489999999996   37899999999 99999987543 1111         11111  


Q ss_pred             c---cHHHHHHHHHHHHCCCee--EeecccccC
Q 023273          256 S---DGSILEKLNPYFESGKVK--AIIDPKGLL  283 (284)
Q Consensus       256 ~---~~~~~~~~~~~~~~g~i~--~~i~~~~~~  283 (284)
                      .   ..++++++++++++|+++  +.|+++|||
T Consensus       320 ~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l  352 (374)
T 1cdo_A          320 GGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPL  352 (374)
T ss_dssp             GGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG
T ss_pred             CCCCcHHHHHHHHHHHHcCCCChHHheeeEecH
Confidence            1   257899999999999987  578999986

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.6e-44  Score=317.59  Aligned_cols=274  Identities=22%  Similarity=0.263  Sum_probs=227.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++.++++.   ++++ +.|.|+|++|||+|||.+++||++|++.+.|.++.  ..+|.++|||++|+|+++|++++
T Consensus        23 ~~a~~~~~~~~~---l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~P~v~GhE~~G~V~~vG~~V~   96 (369)
T 1uuf_A           23 IKAVGAYSAKQP---LEPM-DITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG--TVYPCVPGHEIVGRVVAVGDQVE   96 (369)
T ss_dssp             CEEEEBSSTTSC---CEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC--CCSSBCCCCCEEEEEEEECTTCC
T ss_pred             EEEEEEcCCCCC---cEEE-EecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCC--CCCCeecccCceEEEEEECCCCC
Confidence            788888776555   8998 89999999999999999999999999999886542  35689999999999999999999


Q ss_pred             CCCCCCEEEEecC-----ccc---------------cC-------CCCCCCceeeEEeeecCceeeCCCC-CCHHhhhcc
Q 023273           81 KFKVGDEVYGDIN-----EKA---------------LD-------HPKRNGSLAEYTAVEENLLALKPKN-LSFVEAASL  132 (284)
Q Consensus        81 ~~~~Gd~V~~~~~-----~~~---------------~~-------~~~~~g~~~~~~~~~~~~~~~ip~~-~~~~~aa~~  132 (284)
                      +|++||||++.+.     .+.               ..       +...+|+|+||+++|++.++++|++ ++++++|++
T Consensus        97 ~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l  176 (369)
T 1uuf_A           97 KYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPL  176 (369)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGG
T ss_pred             CCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhh
Confidence            9999999986421     000               00       2234699999999999999999999 999999999


Q ss_pred             cchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc-cccC
Q 023273          133 PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IEDL  211 (284)
Q Consensus       133 ~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~  211 (284)
                      ++++.|||+++...++++|++|||+|+ |++|++++|+|+.+ |++|+++++++++++.++++|++.++++.+.+ ....
T Consensus       177 ~~~~~tA~~al~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~  254 (369)
T 1uuf_A          177 LCAGITTYSPLRHWQAGPGKKVGVVGI-GGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAH  254 (369)
T ss_dssp             GTHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTT
T ss_pred             hhhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHh
Confidence            999999999998789999999999994 99999999999996 99999999999999999999999999886543 2333


Q ss_pred             CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC-ce----------eEEE--eccHHHHHHHHHHHHCCCeeE
Q 023273          212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-AS----------SFVL--TSDGSILEKLNPYFESGKVKA  275 (284)
Q Consensus       212 ~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-~~----------~~~~--~~~~~~~~~~~~~~~~g~i~~  275 (284)
                      .+++|++||++|.   .+.++++|+++|+++.+|....+. .+          ++..  ....++++++++++++|++++
T Consensus       255 ~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~  334 (369)
T 1uuf_A          255 LKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVA  334 (369)
T ss_dssp             TTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHHTCCC
T ss_pred             hcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCHHHHHHHHHHHHhCCCCc
Confidence            4689999999984   478999999999999998754321 11          1211  124688999999999999999


Q ss_pred             eecccccC
Q 023273          276 IIDPKGLL  283 (284)
Q Consensus       276 ~i~~~~~~  283 (284)
                      .++ +|||
T Consensus       335 ~i~-~~~l  341 (369)
T 1uuf_A          335 DIE-MIRA  341 (369)
T ss_dssp             CEE-EECG
T ss_pred             ceE-EEcH
Confidence            875 6876

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-43  Score=314.87  Aligned_cols=275  Identities=22%  Similarity=0.291  Sum_probs=224.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHc-CCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRML-GAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      |||+++.+++.    ++++ +.|.|+|++|||+|||.+++||++|++.+. +.++....++|.++|||++|+|+++|+++
T Consensus         5 mka~~~~~~~~----l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v   79 (352)
T 1e3j_A            5 NLSAVLYKQND----LRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNV   79 (352)
T ss_dssp             CEEEEEEETTE----EEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTC
T ss_pred             CEEEEEEcCCc----EEEE-EecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCC
Confidence            89999998764    6888 889999999999999999999999999887 44322233578999999999999999999


Q ss_pred             CCCCCCCEEEEecCc----c--------------ccCCC-CCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHH
Q 023273           80 KKFKVGDEVYGDINE----K--------------ALDHP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY  140 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~----~--------------~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  140 (284)
                      ++|++||||++.+..    +              ...+. ..+|+|+||+++|++.++++|++++++++|++ .++.|||
T Consensus        80 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~  158 (352)
T 1e3j_A           80 KHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPLSVGV  158 (352)
T ss_dssp             CSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHHHHH
T ss_pred             CCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chHHHHH
Confidence            999999999875311    0              00111 24799999999999999999999999998865 5778999


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC-cccc-cC-------
Q 023273          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIE-DL-------  211 (284)
Q Consensus       141 ~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~-~~-------  211 (284)
                      ++++.+++++|++|+|+| +|++|++++++|+.+ |++|+++++++++++.++++|+++++++++ .++. ..       
T Consensus       159 ~al~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~  236 (352)
T 1e3j_A          159 HACRRAGVQLGTTVLVIG-AGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSA  236 (352)
T ss_dssp             HHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccc
Confidence            999889999999999999 599999999999996 999999999999999999999999998763 3322 11       


Q ss_pred             -CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCce----------eEEE-eccHHHHHHHHHHHHCCCe--e
Q 023273          212 -PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SFVL-TSDGSILEKLNPYFESGKV--K  274 (284)
Q Consensus       212 -~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~~~-~~~~~~~~~~~~~~~~g~i--~  274 (284)
                       ++++|++||++|.   .+.++++|+++|+++.+|....+..+          ++.. ....++++++++++++|++  +
T Consensus       237 ~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~  316 (352)
T 1e3j_A          237 IGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGRCNVK  316 (352)
T ss_dssp             SSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCHHHHHHHHHTTSCCCG
T ss_pred             cCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccchHHHHHHHHHHHcCCCChH
Confidence             2579999999986   37899999999999999865422221          1111 1124679999999999986  5


Q ss_pred             EeecccccC
Q 023273          275 AIIDPKGLL  283 (284)
Q Consensus       275 ~~i~~~~~~  283 (284)
                      +.|+++|||
T Consensus       317 ~~i~~~~~l  325 (352)
T 1e3j_A          317 QLVTHSFKL  325 (352)
T ss_dssp             GGEEEEEEG
T ss_pred             HheeEEecH
Confidence            678999986

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-43  Score=317.16  Aligned_cols=273  Identities=20%  Similarity=0.285  Sum_probs=227.6

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++.+   ++++ +.|.|+|++|||+|||.+++||++|++.+.|.++   ..+|.++|||++|+|+++|++++
T Consensus         7 mka~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~P~v~GhE~~G~V~~vG~~v~   79 (371)
T 1f8f_A            7 IIAAVTPCKGAD---FELQ-ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP---VPLPAVLGHEGSGIIEAIGPNVT   79 (371)
T ss_dssp             EEEEEBCSTTCC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC---CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             ceEEEEcCCCCC---eEEE-EecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC---CCCCcccCcccceEEEEeCCCCC
Confidence            899999998865   7898 8899999999999999999999999999998753   35789999999999999999999


Q ss_pred             CCCCCCEEEEecCccc--------------------c--------------CC------CCCCCceeeEEeeecCceeeC
Q 023273           81 KFKVGDEVYGDINEKA--------------------L--------------DH------PKRNGSLAEYTAVEENLLALK  120 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~--------------------~--------------~~------~~~~g~~~~~~~~~~~~~~~i  120 (284)
                      +|++||||++.+..+.                    .              .+      ....|+|+||+++|++.++++
T Consensus        80 ~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~i  159 (371)
T 1f8f_A           80 ELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKV  159 (371)
T ss_dssp             SCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEE
T ss_pred             CCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEEC
Confidence            9999999987530000                    0              00      012589999999999999999


Q ss_pred             CCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCc
Q 023273          121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD  198 (284)
Q Consensus       121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~  198 (284)
                      |++++++++|++++++.|||+++ +.+++++|++|+|+| +|++|++++++|+.+ |+ +|++++++++|++.++++|++
T Consensus       160 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~  237 (371)
T 1f8f_A          160 TKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWG-AGAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQLGAT  237 (371)
T ss_dssp             CTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEES-CSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHHHTCS
T ss_pred             CCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCC
Confidence            99999999999999999999999 678999999999999 699999999999996 87 689999999999999999999


Q ss_pred             EEeeCCCccccc-----CCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCC--CCce----------eEEEec--
Q 023273          199 LAIDYTKENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT--PPAS----------SFVLTS--  256 (284)
Q Consensus       199 ~~~~~~~~~~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~--~~~~----------~~~~~~--  256 (284)
                      ++++++..++.+     ..+++|++||++|.   .+.++++|+++|+++.+|....  +..+          ++....  
T Consensus       238 ~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  317 (371)
T 1f8f_A          238 HVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  317 (371)
T ss_dssp             EEEETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             EEecCCccCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCC
Confidence            999987554322     13389999999996   4789999999999999987542  1111          121111  


Q ss_pred             ---cHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273          257 ---DGSILEKLNPYFESGKVKA--IIDPKGLL  283 (284)
Q Consensus       257 ---~~~~~~~~~~~~~~g~i~~--~i~~~~~~  283 (284)
                         ..++++++++++++|++++  .|++ |||
T Consensus       318 ~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l  348 (371)
T 1f8f_A          318 SGSPKKFIPELVRLYQQGKFPFDQLVKF-YAF  348 (371)
T ss_dssp             GSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEG
T ss_pred             CCchHHHHHHHHHHHHcCCCCcccceeE-ecH
Confidence               1478999999999999975  5888 886

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=2.5e-44  Score=315.80  Aligned_cols=273  Identities=22%  Similarity=0.226  Sum_probs=228.4

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||++++++|++ +.++++ +.|.|+|++|||+|||.+++||++|++.+.|.++. ..++|.++|||++|+|+++|  ++
T Consensus         1 MkA~~~~~~g~~-~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~G~E~~G~V~~~G--v~   75 (324)
T 3nx4_A            1 MQALILEQQDGK-TLASVQ-HLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKI-IRHFPMIPGIDFAGTVHASE--DP   75 (324)
T ss_dssp             CEEEEEEESSSS-EEEEEE-ECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTC-CCSSSBCCCSEEEEEEEEES--ST
T ss_pred             CceEEEecCCCC-ceeeEe-ecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCC-CCCCCccccceeEEEEEEeC--CC
Confidence            999999999987 678998 89999999999999999999999999999997642 24678999999999999998  57


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH---hcccCCCC-EEEE
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE---RSAFSAGK-SILV  156 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~---~~~~~~g~-~vlI  156 (284)
                      +|++||||++...   ..+...+|+|+||+++|++.++++|++++++++|++++.++|||.++.   ..++++++ +|+|
T Consensus        76 ~~~vGdrV~~~~~---~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV  152 (324)
T 3nx4_A           76 RFHAGQEVLLTGW---GVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVV  152 (324)
T ss_dssp             TCCTTCEEEEECT---TBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred             CCCCCCEEEEccc---ccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEE
Confidence            8999999998642   122335799999999999999999999999999999999999998873   45666643 4999


Q ss_pred             EcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccc-ccC-CCcccEEEeCCCC--cHHHHHhh
Q 023273          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI-EDL-PEKFDVVFDAVGQ--CDKALKAV  232 (284)
Q Consensus       157 ~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~-~~~~d~vid~~g~--~~~~~~~l  232 (284)
                      +|++|++|++++|+|+.+ |++|++++++++|.+.++++|+++++|+++.+. ... .+++|++|||+|+  .+.++++|
T Consensus       153 ~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l  231 (324)
T 3nx4_A          153 TGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKVLAQM  231 (324)
T ss_dssp             SSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSCHHHHHHHHHTE
T ss_pred             ECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCCcHHHHHHHHHH
Confidence            998899999999999996 999999999999999999999999998865432 222 4589999999995  58999999


Q ss_pred             ccCCEEEEEcCCCCCC-c----------eeEEEe---c-----cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          233 KEGGRVVSIIGSVTPP-A----------SSFVLT---S-----DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       233 ~~~G~~v~~g~~~~~~-~----------~~~~~~---~-----~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +++|+++.+|...... .          +++...   .     ..+.++++++++++|++++. +++|||
T Consensus       232 ~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~-~~~~~l  300 (324)
T 3nx4_A          232 NYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQA-ATEITL  300 (324)
T ss_dssp             EEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHHH-EEEEEG
T ss_pred             hcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCCC-ceeEeH
Confidence            9999999998764321 1          111111   0     13678899999999999987 888886

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.4e-44  Score=318.64  Aligned_cols=273  Identities=21%  Similarity=0.293  Sum_probs=227.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++.++++.   ++++ +.|.|+|++|||+|||.+++||++|++.+.|.++  ...+|.++|||++|+|+++| +++
T Consensus        18 mka~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~--~~~~P~v~GhE~~G~V~~vG-~V~   90 (380)
T 1vj0_A           18 AHAMVLEKFNQP---LVYK-EFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP--RVPLPIILGHEGAGRVVEVN-GEK   90 (380)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT--TCCSSBCCCCEEEEEEEEES-SCC
T ss_pred             eEEEEEecCCCC---eEEE-EccCCCCCCCEEEEEEeEEeecccchHHhcCCCC--CCCCCcccCcCcEEEEEEeC-Ccc
Confidence            899999999833   6898 8899999999999999999999999999998654  23578999999999999999 998


Q ss_pred             ------CCCCCCEEEEecCc------------cc-------cCCC--------CCCCceeeEEee-ecCceeeCCCCCCH
Q 023273           81 ------KFKVGDEVYGDINE------------KA-------LDHP--------KRNGSLAEYTAV-EENLLALKPKNLSF  126 (284)
Q Consensus        81 ------~~~~Gd~V~~~~~~------------~~-------~~~~--------~~~g~~~~~~~~-~~~~~~~ip~~~~~  126 (284)
                            +|++||||++.+..            ..       ..+.        ..+|+|+||+++ |++.++++|+++++
T Consensus        91 ~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l~~  170 (380)
T 1vj0_A           91 RDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDL  170 (380)
T ss_dssp             BCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTSCH
T ss_pred             ccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCCCCh
Confidence                  99999999985310            00       0111        347999999999 99999999999999


Q ss_pred             H-hhhcccchHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHHcCCcEEeeC
Q 023273          127 V-EAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAIDY  203 (284)
Q Consensus       127 ~-~aa~~~~~~~ta~~al~~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (284)
                      + +++++. ++.|||++++..+ +++|++|||+| +|++|++++|+|+.+ | .+|++++++++|++.++++|+++++++
T Consensus       171 ~~~Aa~~~-~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~  247 (380)
T 1vj0_A          171 DVLAMAMC-SGATAYHAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEEIGADLTLNR  247 (380)
T ss_dssp             HHHHHHTT-HHHHHHHHHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             HHhHhhhc-HHHHHHHHHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHHHcCCcEEEec
Confidence            8 555555 9999999998888 99999999999 899999999999996 8 699999999999999999999999987


Q ss_pred             C---Cccccc----C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCC-C-CCce-----------eEEE--ec
Q 023273          204 T---KENIED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV-T-PPAS-----------SFVL--TS  256 (284)
Q Consensus       204 ~---~~~~~~----~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~-~-~~~~-----------~~~~--~~  256 (284)
                      +   ..++.+    .  +.++|++||++|.   ...++++|+++|+++.+|... . +..+           ++..  ..
T Consensus       248 ~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~  327 (380)
T 1vj0_A          248 RETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVS  327 (380)
T ss_dssp             TTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCC
T ss_pred             cccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEEeecC
Confidence            6   333222    1  3479999999985   478999999999999998755 3 2111           1111  12


Q ss_pred             cHHHHHHHHHHHHC--CCeeEeecccccC
Q 023273          257 DGSILEKLNPYFES--GKVKAIIDPKGLL  283 (284)
Q Consensus       257 ~~~~~~~~~~~~~~--g~i~~~i~~~~~~  283 (284)
                      ..++++++++++++  |++++.|+++|||
T Consensus       328 ~~~~~~~~~~l~~~~~g~l~~~i~~~~~l  356 (380)
T 1vj0_A          328 DTSHFVKTVSITSRNYQLLSKLITHRLPL  356 (380)
T ss_dssp             CHHHHHHHHHHHHTCHHHHGGGCCEEEEG
T ss_pred             CHHHHHHHHHHHHhhcCCeeeEEEEEEeH
Confidence            46889999999999  9999999999986

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=4.3e-43  Score=311.90  Aligned_cols=276  Identities=24%  Similarity=0.296  Sum_probs=226.1

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||+..+...+.+ +.++++ +.|.|+|++|||+|||.+++||++|++.+.|.++.  ..+|.++|||++|+|+++|++++
T Consensus         8 m~~~a~~~~~~~-~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~P~v~GhE~~G~V~~vG~~v~   83 (357)
T 2cf5_A            8 RKTTGWAARDPS-GILSPY-TYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM--SNYPMVPGHEVVGEVVEVGSDVS   83 (357)
T ss_dssp             CEEEEEEECSTT-CCEEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTC--CCSSBCCCCEEEEEEEEECSSCC
T ss_pred             ceeEEEEEccCC-CCcEEE-EecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCC--CCCCeecCcceeEEEEEECCCCC
Confidence            444444444443 448998 88999999999999999999999999999886532  35789999999999999999999


Q ss_pred             CCCCCCEEEEec-----Ccccc---------------------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccc
Q 023273           81 KFKVGDEVYGDI-----NEKAL---------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL  134 (284)
Q Consensus        81 ~~~~Gd~V~~~~-----~~~~~---------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  134 (284)
                      +|++||||+..+     +.+..                     .+...+|+|+||+++|++.++++|++++++++|++++
T Consensus        84 ~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~  163 (357)
T 2cf5_A           84 KFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLC  163 (357)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGT
T ss_pred             CCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhh
Confidence            999999997532     11100                     0122579999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhcccC-CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEeeCCCcc-cccC
Q 023273          135 ATETAYEGLERSAFS-AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKEN-IEDL  211 (284)
Q Consensus       135 ~~~ta~~al~~~~~~-~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~  211 (284)
                      ++.|||+++...+++ +|++|+|+| +|++|++++|+|+.+ |++|++++++++|++.++ ++|+++++++++.+ +.+.
T Consensus       164 ~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~  241 (357)
T 2cf5_A          164 AGVTVYSPLSHFGLKQPGLRGGILG-LGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSEL  241 (357)
T ss_dssp             HHHHHHHHHHHTSTTSTTCEEEEEC-CSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHS
T ss_pred             hHHHHHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHh
Confidence            999999999888888 999999999 699999999999996 899999999999999888 99999999876432 3334


Q ss_pred             CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCc-e---------eEEE--eccHHHHHHHHHHHHCCCeeEe
Q 023273          212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA-S---------SFVL--TSDGSILEKLNPYFESGKVKAI  276 (284)
Q Consensus       212 ~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~-~---------~~~~--~~~~~~~~~~~~~~~~g~i~~~  276 (284)
                      .+++|++||++|.   .+.++++|+++|+++.+|....+.. +         ++..  ....++++++++++++|++++.
T Consensus       242 ~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~  321 (357)
T 2cf5_A          242 ADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSI  321 (357)
T ss_dssp             TTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHHHTTCCCC
T ss_pred             cCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHHHHhCccEEEEEccCCHHHHHHHHHHHHcCCCCCc
Confidence            5689999999984   4899999999999999987643222 1         1111  1246789999999999999988


Q ss_pred             ecccccC
Q 023273          277 IDPKGLL  283 (284)
Q Consensus       277 i~~~~~~  283 (284)
                      + ++|||
T Consensus       322 ~-~~~~l  327 (357)
T 2cf5_A          322 I-EVVKM  327 (357)
T ss_dssp             E-EEEEG
T ss_pred             e-EEEeH
Confidence            7 68886

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.1e-43  Score=324.66  Aligned_cols=280  Identities=29%  Similarity=0.398  Sum_probs=227.2

Q ss_pred             CeEEEEcccC----------CCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHc----------------CCCC
Q 023273            1 MKAWVYKEYG----------NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRML----------------GAFS   54 (284)
Q Consensus         1 m~a~~~~~~g----------~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~----------------g~~~   54 (284)
                      |||+++..++          .+.+.++++ +.|.|+|++|||+|||.+++||++|++...                |.++
T Consensus        25 mkA~v~~~~~~~~~~~~~~~~~~~~l~~~-e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~~  103 (447)
T 4a0s_A           25 YLALHLRAEDADMFKGVADKDVRKSLRLG-EVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWA  103 (447)
T ss_dssp             EEEEEEEGGGTTTTTTCSSCCHHHHCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGGG
T ss_pred             heeeeeeccccccccccccCCCCCCceEE-eccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcccCccc
Confidence            8999999998          111247998 899999999999999999999999985421                2221


Q ss_pred             CCCCCCC-cccccceeEEEEEeCCCCCCCCCCCEEEEecCcc-----------------ccCCCC-CCCceeeEEeeecC
Q 023273           55 ATDSPLP-TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEK-----------------ALDHPK-RNGSLAEYTAVEEN  115 (284)
Q Consensus        55 ~~~~~~p-~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~-----------------~~~~~~-~~g~~~~~~~~~~~  115 (284)
                      . ...+| .++|||++|+|+++|+++++|++||||++.+..+                 ...+.. ..|+|+||+++|++
T Consensus       104 ~-~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~  182 (447)
T 4a0s_A          104 T-RHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRAS  182 (447)
T ss_dssp             G-GGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEEEEEGG
T ss_pred             c-ccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeeeecCHH
Confidence            1 12355 6999999999999999999999999999864211                 011111 25999999999999


Q ss_pred             ceeeCCCCCCHHhhhcccchHHHHHHHHH---hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          116 LLALKPKNLSFVEAASLPLATETAYEGLE---RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       116 ~~~~ip~~~~~~~aa~~~~~~~ta~~al~---~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .++++|++++++++|+++++++|||+++.   .+++++|++|+|+|++|++|++++++|+.+ |+++++++++++|++.+
T Consensus       183 ~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~  261 (447)
T 4a0s_A          183 QLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAV  261 (447)
T ss_dssp             GEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHH
T ss_pred             HcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            99999999999999999999999999983   489999999999998899999999999995 99999999999999999


Q ss_pred             HHcCCcEEeeCCCccc-------------------cc----CCCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCCC
Q 023273          193 RSLGADLAIDYTKENI-------------------ED----LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP  247 (284)
Q Consensus       193 ~~~g~~~~~~~~~~~~-------------------~~----~~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~~  247 (284)
                      +++|++.++++...++                   ..    .++++|++||++|.  .+.++++|+++|+++.+|.....
T Consensus       262 ~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~~  341 (447)
T 4a0s_A          262 RALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGY  341 (447)
T ss_dssp             HHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTTCS
T ss_pred             HhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCCCc
Confidence            9999998888643322                   10    14689999999996  58899999999999999865432


Q ss_pred             -Ccee----------E--EEeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          248 -PASS----------F--VLTSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       248 -~~~~----------~--~~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                       ..++          +  ......+++.++++++++|++++.|+++|||
T Consensus       342 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l  390 (447)
T 4a0s_A          342 LHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVVPAMSAVYPL  390 (447)
T ss_dssp             EEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCEEEEEEG
T ss_pred             ccccCHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCcccceeEEEcH
Confidence             1111          1  1123457888999999999999999999986

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=1.3e-43  Score=315.07  Aligned_cols=275  Identities=23%  Similarity=0.312  Sum_probs=223.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCC-CCCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGA-FSATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~-~~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      |||+++.+++.    ++++ +.|.|+|++|||+|||.+++||++|++.+.|. .+....++|.++|||++|+|+++|+++
T Consensus         8 mka~~~~~~~~----l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V   82 (356)
T 1pl8_A            8 NLSLVVHGPGD----LRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSV   82 (356)
T ss_dssp             CEEEEEEETTE----EEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTC
T ss_pred             ceEEEEecCCc----EEEE-EccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCC
Confidence            89999998764    6898 88999999999999999999999999988742 211123568999999999999999999


Q ss_pred             CCCCCCCEEEEecCc----c--------------ccCCC-CCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHH
Q 023273           80 KKFKVGDEVYGDINE----K--------------ALDHP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY  140 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~----~--------------~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  140 (284)
                      ++|++||||++.+..    +              ...+. ..+|+|+||+++|++.++++|++++++++|++ .++.|||
T Consensus        83 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~ta~  161 (356)
T 1pl8_A           83 KHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSVGI  161 (356)
T ss_dssp             CSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHHHH
T ss_pred             CCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHHHHH
Confidence            999999999876311    0              00111 23699999999999999999999999998865 5778999


Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCC---cccc-cC----
Q 023273          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTK---ENIE-DL----  211 (284)
Q Consensus       141 ~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~-~~----  211 (284)
                      ++++.+++++|++|+|+| +|++|++++|+|+.+ |+ +|++++++++|+++++++|++++++++.   .++. .+    
T Consensus       162 ~al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~  239 (356)
T 1pl8_A          162 HACRRGGVTLGHKVLVCG-AGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQL  239 (356)
T ss_dssp             HHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHh
Confidence            999889999999999999 599999999999996 88 8999999999999999999999998762   2221 11    


Q ss_pred             CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee----------EEE-eccHHHHHHHHHHHHCCCe--eE
Q 023273          212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS----------FVL-TSDGSILEKLNPYFESGKV--KA  275 (284)
Q Consensus       212 ~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~----------~~~-~~~~~~~~~~~~~~~~g~i--~~  275 (284)
                      .+++|++||++|.   ...++++|+++|+++.+|....+..++          +.. ....++++++++++++|++  ++
T Consensus       240 ~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~  319 (356)
T 1pl8_A          240 GCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKP  319 (356)
T ss_dssp             TSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCHHHHHHHHHTTSCCCGG
T ss_pred             CCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEecccHHHHHHHHHHHHcCCCChHH
Confidence            3689999999996   378899999999999998644222221          111 1124678999999999996  56


Q ss_pred             eecccccC
Q 023273          276 IIDPKGLL  283 (284)
Q Consensus       276 ~i~~~~~~  283 (284)
                      .|+++|||
T Consensus       320 ~i~~~~~l  327 (356)
T 1pl8_A          320 LVTHRFPL  327 (356)
T ss_dssp             GEEEEEEG
T ss_pred             heEEEecH
Confidence            78999986

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=7.8e-44  Score=315.10  Aligned_cols=274  Identities=23%  Similarity=0.292  Sum_probs=228.0

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC-CCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      |||+++.+++++   ++++ +.|.|+|++|||+|||.+++||++|++.+.|.++. ....+|.++|||++|+|+++|+++
T Consensus         1 Mka~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v   76 (343)
T 2dq4_A            1 MRALAKLAPEEG---LTLV-DRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGV   76 (343)
T ss_dssp             CEEEEECSSSSS---CEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTC
T ss_pred             CeEEEEeCCCCc---EEEE-eccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCC
Confidence            999999999975   6898 89999999999999999999999999999886431 013568999999999999999999


Q ss_pred             CCCCCCCEEEEecCc------------------cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           80 KKFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      ++|++||||++.+..                  ....+...+|+|+||+++|++.++++|++++++++|++ .++.|||+
T Consensus        77 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~  155 (343)
T 2dq4_A           77 RRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFGNAVH  155 (343)
T ss_dssp             CSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHHHHHH
T ss_pred             CcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHHHHHH
Confidence            999999999885311                  00112335799999999999999999999999998877 46779999


Q ss_pred             HHH-hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC-----CCc
Q 023273          142 GLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEK  214 (284)
Q Consensus       142 al~-~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~  214 (284)
                      ++. .+++ +|++|+|+|+ |++|++++++|+.+ |+ +|+++++++++++.++++ ++++++++.+++.+.     +++
T Consensus       156 ~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g  231 (343)
T 2dq4_A          156 TVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSG  231 (343)
T ss_dssp             HHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSC
T ss_pred             HHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCC
Confidence            997 8889 9999999997 99999999999996 88 999999999999999999 999998875443321     458


Q ss_pred             ccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCce-----------eEEE--ec-cHHHHHHHHHHHHCCC--eeE
Q 023273          215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS-----------SFVL--TS-DGSILEKLNPYFESGK--VKA  275 (284)
Q Consensus       215 ~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~-----------~~~~--~~-~~~~~~~~~~~~~~g~--i~~  275 (284)
                      +|++||++|.   .+.++++|+++|+++.+|.+..+..+           ++..  .. ..++++++++++++|+  +++
T Consensus       232 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~~~~~~  311 (343)
T 2dq4_A          232 VEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDLSP  311 (343)
T ss_dssp             EEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHHTSSCCGG
T ss_pred             CCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHcCCCChHH
Confidence            9999999996   37899999999999999875432111           1111  11 4678999999999999  578


Q ss_pred             eecccccC
Q 023273          276 IIDPKGLL  283 (284)
Q Consensus       276 ~i~~~~~~  283 (284)
                      .|+++|||
T Consensus       312 ~i~~~~~l  319 (343)
T 2dq4_A          312 LLTHRLPL  319 (343)
T ss_dssp             GEEEEEEG
T ss_pred             heeEEecH
Confidence            89999986

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=1.5e-43  Score=315.62  Aligned_cols=273  Identities=20%  Similarity=0.208  Sum_probs=222.1

Q ss_pred             CeEEEEcccCCCccceEEeccccCC--------CCCCCeEEEEEeEeecCHHHHHHHcCC-CCCCCCCCCcccccceeEE
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVP--------SLREDQVLIKVVAAALNPIDFKRMLGA-FSATDSPLPTIPGYDVAGV   71 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~--------~~~~~ev~V~v~~~~i~~~d~~~~~g~-~~~~~~~~p~~~G~e~~G~   71 (284)
                      |||+++..++.    ++++ +.|.|        +|++|||+|||.+++||++|++.+.+. ++....++|.++|||++|+
T Consensus         9 mka~~~~~~~~----l~~~-~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~   83 (363)
T 3m6i_A            9 NIGVFTNPQHD----LWIS-EASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGE   83 (363)
T ss_dssp             CEEEEECTTCC----EEEE-ECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEE
T ss_pred             ceeEEEeCCCc----EEEE-EecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEE
Confidence            89999997766    6998 89999        999999999999999999999988743 2323346789999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEecCc------------------cccCC-CCCCCceeeEEeeecCceeeCCCCCCHHhhhcc
Q 023273           72 VEKVGSQVKKFKVGDEVYGDINE------------------KALDH-PKRNGSLAEYTAVEENLLALKPKNLSFVEAASL  132 (284)
Q Consensus        72 V~~vG~~~~~~~~Gd~V~~~~~~------------------~~~~~-~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~  132 (284)
                      |+++|+++++|++||||++.+..                  ....+ ...+|+|+||+++|++.++++|+ ++++++|++
T Consensus        84 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~aa~~  162 (363)
T 3m6i_A           84 VIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAML  162 (363)
T ss_dssp             EEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHHHHHH
T ss_pred             EEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHHHHhh
Confidence            99999999999999999875311                  00011 12579999999999999999999 999999987


Q ss_pred             cchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCC-----Cc
Q 023273          133 PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYT-----KE  206 (284)
Q Consensus       133 ~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~-----~~  206 (284)
                       .++.|||++++.+++++|++|||+|+ |++|++++|+|+.+ |++ |++++.+++|+++++++ ++.++++.     .+
T Consensus       163 -~~~~ta~~~l~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~  238 (363)
T 3m6i_A          163 -EPLSVALAGLQRAGVRLGDPVLICGA-GPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAE  238 (363)
T ss_dssp             -HHHHHHHHHHHHHTCCTTCCEEEECC-SHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHH
T ss_pred             -hHHHHHHHHHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-chhcccccccccchH
Confidence             47789999998899999999999995 99999999999996 886 99999999999999999 65555442     11


Q ss_pred             cccc----C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee----------EEE-eccHHHHHHHHH
Q 023273          207 NIED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS----------FVL-TSDGSILEKLNP  266 (284)
Q Consensus       207 ~~~~----~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~----------~~~-~~~~~~~~~~~~  266 (284)
                      ++.+    .  ++++|++||++|+   .+.++++|+++|+++.+|.......++          +.. ....++++++++
T Consensus       239 ~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  318 (363)
T 3m6i_A          239 ESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIR  318 (363)
T ss_dssp             HHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSCSSCHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCCHHHHHHHHH
Confidence            2221    1  4589999999996   378999999999999998765332222          111 112678999999


Q ss_pred             HHHCCCe--eEeecccccC
Q 023273          267 YFESGKV--KAIIDPKGLL  283 (284)
Q Consensus       267 ~~~~g~i--~~~i~~~~~~  283 (284)
                      ++++|++  ++.|+++|||
T Consensus       319 l~~~g~i~~~~~i~~~~~l  337 (363)
T 3m6i_A          319 LVENGLVDLTRLVTHRFPL  337 (363)
T ss_dssp             HHHTTSSCCGGGEEEEEEG
T ss_pred             HHHhCCCChHHceeeeeeH
Confidence            9999998  6679999986

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=2.6e-43  Score=322.84  Aligned_cols=281  Identities=26%  Similarity=0.388  Sum_probs=228.6

Q ss_pred             CeEEEEcccC------------CCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCC-------------CCC
Q 023273            1 MKAWVYKEYG------------NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGA-------------FSA   55 (284)
Q Consensus         1 m~a~~~~~~g------------~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~-------------~~~   55 (284)
                      |||+++..++            .+.+.++++ +.|.|+|++|||+|||.+++||++|++...+.             ...
T Consensus        31 mkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g~~~~  109 (456)
T 3krt_A           31 YRAITVHKDETEMFAGLETRDKDPRKSIHLD-DVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSD  109 (456)
T ss_dssp             EEEEEEEGGGTTTTTTCCGGGCCHHHHCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHHTSCH
T ss_pred             eEEEEEeccccccccccccccCCCCCCcEEE-EccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhcccccc
Confidence            8999999872            111348998 89999999999999999999999998765321             000


Q ss_pred             --CCCCCC-cccccceeEEEEEeCCCCCCCCCCCEEEEecCccc-----------------cCCC-CCCCceeeEEeeec
Q 023273           56 --TDSPLP-TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKA-----------------LDHP-KRNGSLAEYTAVEE  114 (284)
Q Consensus        56 --~~~~~p-~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~-----------------~~~~-~~~g~~~~~~~~~~  114 (284)
                        ...++| .++|||++|+|+++|+++++|++||||++.+..+.                 ..+. ..+|+|+||+++|+
T Consensus       110 ~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~  189 (456)
T 3krt_A          110 LAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKS  189 (456)
T ss_dssp             HHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSEEEEEG
T ss_pred             ccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccceEEech
Confidence              012456 68999999999999999999999999998653211                 0111 22599999999999


Q ss_pred             CceeeCCCCCCHHhhhcccchHHHHHHHHHh---cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273          115 NLLALKPKNLSFVEAASLPLATETAYEGLER---SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL  191 (284)
Q Consensus       115 ~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~---~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~  191 (284)
                      +.++++|++++++++|++++++.|||+++..   +++++|++|+|+|++|++|++++++|+.+ |+++++++++++|++.
T Consensus       190 ~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~  268 (456)
T 3krt_A          190 NQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEI  268 (456)
T ss_dssp             GGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHH
T ss_pred             HHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHH
Confidence            9999999999999999999999999999842   78999999999998899999999999995 9999999999999999


Q ss_pred             HHHcCCcEEeeCCCcccc------------------cC-----CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCC
Q 023273          192 LRSLGADLAIDYTKENIE------------------DL-----PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT  246 (284)
Q Consensus       192 ~~~~g~~~~~~~~~~~~~------------------~~-----~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~  246 (284)
                      ++++|++.++++...++.                  .+     +.++|++|||+|+  ...++++|+++|+++.+|....
T Consensus       269 ~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~  348 (456)
T 3krt_A          269 CRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSG  348 (456)
T ss_dssp             HHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEEEESCCTTC
T ss_pred             HHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEEEEEecCCC
Confidence            999999999998764431                  11     3589999999995  5889999999999999987643


Q ss_pred             C-Ccee----------EE--EeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          247 P-PASS----------FV--LTSDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       247 ~-~~~~----------~~--~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      . ..++          +.  .....+++.++++++++|+|++.|+++|||
T Consensus       349 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l  398 (456)
T 3krt_A          349 YMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLSKVYSL  398 (456)
T ss_dssp             SEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCEEEEEEG
T ss_pred             cccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCcccceeEEEcH
Confidence            2 1111          11  112456788899999999999999999987

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=2.9e-43  Score=313.82  Aligned_cols=272  Identities=19%  Similarity=0.289  Sum_probs=224.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCC--CCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCC---------ccccccee
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLR--EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLP---------TIPGYDVA   69 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~--~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p---------~~~G~e~~   69 (284)
                      |||+++.++|.+.+.++++ +.|.|+|+  +|||+|||.+++||++|++.+.|.++.. ..+|         .++|||++
T Consensus         4 mka~~~~~~g~~~~~l~~~-~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~P~~~~~~~p~~i~G~E~~   81 (364)
T 1gu7_A            4 AQAVLYTQHGEPKDVLFTQ-SFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK-PAKTTGFGTTEPAAPCGNEGL   81 (364)
T ss_dssp             EEEEEESSCSCHHHHCEEE-EEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCC-CCCBSTTCCSSCBEECCSCCE
T ss_pred             EEEEEeccCCCchheeEEe-eccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCC-CCCCccccccCcccccCceeE
Confidence            8999999998742347888 78888877  9999999999999999999999876431 2345         89999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCC-----------CCCHHhhhcccchHHH
Q 023273           70 GVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPK-----------NLSFVEAASLPLATET  138 (284)
Q Consensus        70 G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~-----------~~~~~~aa~~~~~~~t  138 (284)
                      |+|+++|+++++|++||||++...        ..|+|++|+++|++.++++|+           +++++++|+++++++|
T Consensus        82 G~V~~vG~~v~~~~vGdrV~~~~~--------~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~t  153 (364)
T 1gu7_A           82 FEVIKVGSNVSSLEAGDWVIPSHV--------NFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLT  153 (364)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESSS--------CCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHH
T ss_pred             EEEEEeCCCCCcCCCCCEEEecCC--------CCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHH
Confidence            999999999999999999998642        369999999999999999998           8999999999999999


Q ss_pred             HHHHHHh-cccCCC-CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh----HHHHHHcCCcEEeeCCC---cccc
Q 023273          139 AYEGLER-SAFSAG-KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK----LDLLRSLGADLAIDYTK---ENIE  209 (284)
Q Consensus       139 a~~al~~-~~~~~g-~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~----~~~~~~~g~~~~~~~~~---~~~~  209 (284)
                      ||+++.. +++++| ++|+|+|++|++|++++|+|+.+ |++++++++++++    .+.++++|++++++++.   .++.
T Consensus       154 a~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~  232 (364)
T 1gu7_A          154 AYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFG  232 (364)
T ss_dssp             HHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGH
T ss_pred             HHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHH
Confidence            9999965 689999 99999998899999999999996 9999998876654    67788999999998753   2222


Q ss_pred             c--------CCCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCC-CC----------ceeEEEec--c---------
Q 023273          210 D--------LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT-PP----------ASSFVLTS--D---------  257 (284)
Q Consensus       210 ~--------~~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~-~~----------~~~~~~~~--~---------  257 (284)
                      +        -++++|++|||+|+  ...++++|+++|+++.+|.... +.          .+++....  .         
T Consensus       233 ~~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  312 (364)
T 1gu7_A          233 PTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELK  312 (364)
T ss_dssp             HHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEECCHHHHHTTCHHHH
T ss_pred             HHHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCCCcccCHHHHhhcCcEEEEEchhHhcccCHHHH
Confidence            1        13589999999995  3578999999999999987542 11          11111111  1         


Q ss_pred             HHHHHHHHHHHHCCCeeEeecccccC
Q 023273          258 GSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       258 ~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      .++++++++++++|++++.+.+++||
T Consensus       313 ~~~~~~~~~l~~~g~l~~~~~~~~~~  338 (364)
T 1gu7_A          313 TSTLNQIIAWYEEGKLTDAKSIETLY  338 (364)
T ss_dssp             HHHHHHHHHHHHHTCCCCCCCEEEEC
T ss_pred             HHHHHHHHHHHHcCCcccccceEEec
Confidence            36789999999999999977777775

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=1.3e-42  Score=309.80  Aligned_cols=276  Identities=22%  Similarity=0.274  Sum_probs=228.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||+..+..++.+ ..++++ +.|.|+|++|||+|||.+++||++|++.+.|.++.  ..+|.++|||++|+|+++|++++
T Consensus        15 mk~~~~~~~~~~-~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~P~v~GhE~~G~V~~vG~~V~   90 (366)
T 1yqd_A           15 VKAFGWAARDQS-GHLSPF-NFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGF--SMYPLVPGHEIVGEVTEVGSKVK   90 (366)
T ss_dssp             EEEEEEEECSTT-CCEEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSC--CCSSBCCCCCEEEEEEEECTTCC
T ss_pred             eeEEEEEEcCCC-CCcEEE-EccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCC--CCCCEecccceEEEEEEECCCCC
Confidence            677777766655 558998 88999999999999999999999999999886542  35789999999999999999999


Q ss_pred             CCCCCCEEEEec-----Ccccc---------------------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccc
Q 023273           81 KFKVGDEVYGDI-----NEKAL---------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL  134 (284)
Q Consensus        81 ~~~~Gd~V~~~~-----~~~~~---------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  134 (284)
                      +|++||||+..+     +.+..                     .+...+|+|+||+++|++.++++|++++++++|++++
T Consensus        91 ~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~  170 (366)
T 1yqd_A           91 KVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLC  170 (366)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGT
T ss_pred             cCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhh
Confidence            999999998532     11100                     0112579999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhcccC-CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEeeCCCcc-cccC
Q 023273          135 ATETAYEGLERSAFS-AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKEN-IEDL  211 (284)
Q Consensus       135 ~~~ta~~al~~~~~~-~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~  211 (284)
                      ++.|||+++...+++ +|++|+|+| +|++|++++++|+.+ |++|+++++++++++.++ ++|++.++++++.+ +.+.
T Consensus       171 ~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~  248 (366)
T 1yqd_A          171 AGITVYSPLKYFGLDEPGKHIGIVG-LGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAA  248 (366)
T ss_dssp             HHHHHHHHHHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHT
T ss_pred             hHHHHHHHHHhcCcCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHh
Confidence            999999999877888 999999999 599999999999995 899999999999998887 89999998876432 3334


Q ss_pred             CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCce----------eEEE--eccHHHHHHHHHHHHCCCeeEe
Q 023273          212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SFVL--TSDGSILEKLNPYFESGKVKAI  276 (284)
Q Consensus       212 ~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~~~--~~~~~~~~~~~~~~~~g~i~~~  276 (284)
                      .+++|++||++|.   .+.++++|+++|+++.+|....+..+          ++..  ....++++++++++++|++++.
T Consensus       249 ~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~  328 (366)
T 1yqd_A          249 AGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKHNITAD  328 (366)
T ss_dssp             TTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHTTCCCC
T ss_pred             hCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCCCc
Confidence            4689999999984   48999999999999999876532111          1111  1246789999999999999998


Q ss_pred             ecccccC
Q 023273          277 IDPKGLL  283 (284)
Q Consensus       277 i~~~~~~  283 (284)
                      + ++|||
T Consensus       329 ~-~~~~l  334 (366)
T 1yqd_A          329 I-EVIST  334 (366)
T ss_dssp             E-EEECG
T ss_pred             e-EEEcH
Confidence            7 68886

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=7.4e-43  Score=315.24  Aligned_cols=279  Identities=22%  Similarity=0.309  Sum_probs=228.1

Q ss_pred             CeEEEEcccCCCc------------------------cceEEeccccCCC-CCCCeEEEEEeEeecCHHHHHHHcCCCCC
Q 023273            1 MKAWVYKEYGNSQ------------------------SVLKFETNVEVPS-LREDQVLIKVVAAALNPIDFKRMLGAFSA   55 (284)
Q Consensus         1 m~a~~~~~~g~~~------------------------~~~~~~~~~~~~~-~~~~ev~V~v~~~~i~~~d~~~~~g~~~~   55 (284)
                      |||+++.+++.+.                        ..++++ +.|.|+ |++|||+|||.+++||++|++.+.|....
T Consensus         3 m~a~~~~~~~~p~~~~~~~~~~~~~~~~m~a~~~~~~~~l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~   81 (404)
T 3ip1_A            3 LRAVRLHAKWDPRPEFKLGPKDIEGKLTWLGSKVWRYPEVRVE-EVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEG   81 (404)
T ss_dssp             EEEEEEEEEECCCTTCCCCTTCBTTTBBSCGGGTEEEEEEEEE-EECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTS
T ss_pred             ceEEEecCCCCCCCCCCCCchhhhhhhhcceEEEEeCCceEEE-EcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCc
Confidence            8999999888773                        157888 889999 99999999999999999999999864211


Q ss_pred             -----CCCCCCcccccceeEEEEEeCCCC------CCCCCCCEEEEecC------------------ccccCCCCCCCce
Q 023273           56 -----TDSPLPTIPGYDVAGVVEKVGSQV------KKFKVGDEVYGDIN------------------EKALDHPKRNGSL  106 (284)
Q Consensus        56 -----~~~~~p~~~G~e~~G~V~~vG~~~------~~~~~Gd~V~~~~~------------------~~~~~~~~~~g~~  106 (284)
                           ...++|.++|||++|+|+++|+++      ++|++||||++.+.                  +....+...+|+|
T Consensus        82 ~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~  161 (404)
T 3ip1_A           82 YILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAF  161 (404)
T ss_dssp             BBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSS
T ss_pred             cccccccCCCCcccCccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCC
Confidence                 123678999999999999999999      88999999998531                  1111234457999


Q ss_pred             eeEEeeecCceeeCCCCCC------HHhhhcccchHHHHHHHHH-h-cccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-
Q 023273          107 AEYTAVEENLLALKPKNLS------FVEAASLPLATETAYEGLE-R-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-  177 (284)
Q Consensus       107 ~~~~~~~~~~~~~ip~~~~------~~~aa~~~~~~~ta~~al~-~-~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-  177 (284)
                      ++|+++|.+.++++|+.++      +.++|+++.++.|||+++. . +++++|++|||+|+ |++|++++|+|+.+ |+ 
T Consensus       162 aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~-Ga~  239 (404)
T 3ip1_A          162 AEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHA-GAS  239 (404)
T ss_dssp             BSEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHT-TCS
T ss_pred             cceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCC
Confidence            9999999999999999875      4668888999999999994 3 58999999999995 99999999999996 88 


Q ss_pred             eEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCCc----HHHHHhh----ccCCEEEEEcC
Q 023273          178 SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQC----DKALKAV----KEGGRVVSIIG  243 (284)
Q Consensus       178 ~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~~----~~~~~~l----~~~G~~v~~g~  243 (284)
                      +|++++.+++|+++++++|++++++++..++.+.      ++++|++|||+|+.    ..++++|    +++|+++.+|.
T Consensus       240 ~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~  319 (404)
T 3ip1_A          240 KVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVAR  319 (404)
T ss_dssp             EEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred             EEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence            8999999999999999999999999876554331      34899999999974    4566777    99999999997


Q ss_pred             CCCCCcee----------EEEe---ccHHHHHHHHHHHHCCCe--eEeecccccC
Q 023273          244 SVTPPASS----------FVLT---SDGSILEKLNPYFESGKV--KAIIDPKGLL  283 (284)
Q Consensus       244 ~~~~~~~~----------~~~~---~~~~~~~~~~~~~~~g~i--~~~i~~~~~~  283 (284)
                      ...+..++          +...   ...++++++++++++| +  ++.|+++|||
T Consensus       320 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l  373 (404)
T 3ip1_A          320 ADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASG-MDMTKIISKTVSM  373 (404)
T ss_dssp             CCSCEEECHHHHHHTTCEEEECCCCCSTTHHHHHHHHHHTT-CCGGGGCCEEECG
T ss_pred             CCCCCcccHHHHhccceEEEEecCCCchHHHHHHHHHHHcC-CChhheEEEEeeH
Confidence            65432221          1111   1267899999999999 6  4579999986

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=3.4e-43  Score=312.60  Aligned_cols=270  Identities=18%  Similarity=0.211  Sum_probs=224.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCC---CcccccceeEEEEEeCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL---PTIPGYDVAGVVEKVGS   77 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~---p~~~G~e~~G~V~~vG~   77 (284)
                      |||+++.+++..   ++++ +.|.|+|++|||+|||.+++||++|++.+.|.++.  .++   |.++|||++| |+++|+
T Consensus         1 MkA~~~~~~~~~---l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~~~p~v~G~E~~G-V~~vG~   73 (357)
T 2b5w_A            1 MKAIAVKRGEDR---PVVI-EKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG--FPEGEDHLVLGHEAVG-VVVDPN   73 (357)
T ss_dssp             CEEEEEETTCSS---CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT--SCTTCSEEECCSEEEE-EEEECT
T ss_pred             CeEEEEeCCCCc---eEEE-ECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC--CCCCCCCcccCceeEE-EEEECC
Confidence            999999999874   6898 88999999999999999999999999999987542  345   8899999999 999999


Q ss_pred             CCCCCCCCCEEEEec------Ccccc--------------C--CC-CCCCceeeEEeeecCceeeCCCCCCHHhhhcccc
Q 023273           78 QVKKFKVGDEVYGDI------NEKAL--------------D--HP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL  134 (284)
Q Consensus        78 ~~~~~~~Gd~V~~~~------~~~~~--------------~--~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  134 (284)
                      + ++|++||||++.+      +.+..              .  +. ..+|+|+||+++|++.++++|++++ + +|+++.
T Consensus        74 ~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~-~aal~~  150 (357)
T 2b5w_A           74 D-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-E-LGFLIE  150 (357)
T ss_dssp             T-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-T-TGGGHH
T ss_pred             C-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-h-hhhhhc
Confidence            9 9999999999863      21100              0  11 2369999999999999999999999 5 556778


Q ss_pred             hHHHHHHHHHhcccCCC------CEEEEEcCCchHHHHH-HHHH-HHhcCCe-EEEEeCChh---hHHHHHHcCCcEEee
Q 023273          135 ATETAYEGLERSAFSAG------KSILVLGGAGGVGTMV-IQLA-KHVFGAS-KVAATSSTA---KLDLLRSLGADLAID  202 (284)
Q Consensus       135 ~~~ta~~al~~~~~~~g------~~vlI~ga~g~~G~~a-~~~a-~~~~g~~-vi~~~~~~~---~~~~~~~~g~~~~~~  202 (284)
                      ++.|||++++.+++++|      ++|+|+|+ |++|+++ +|+| +.+ |++ |++++++++   |.++++++|++++ +
T Consensus       151 ~~~ta~~al~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~  227 (357)
T 2b5w_A          151 PISITEKALEHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEELDATYV-D  227 (357)
T ss_dssp             HHHHHHHHHHHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHTTCEEE-E
T ss_pred             hHHHHHHHHHhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHcCCccc-C
Confidence            99999999988889999      99999997 9999999 9999 985 887 999999999   9999999999988 8


Q ss_pred             CCCcccccC---CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCC-CCCce--------------eEEE--eccHH
Q 023273          203 YTKENIEDL---PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV-TPPAS--------------SFVL--TSDGS  259 (284)
Q Consensus       203 ~~~~~~~~~---~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~-~~~~~--------------~~~~--~~~~~  259 (284)
                      ++..++.++   .+++|++||++|.   .+.++++|+++|+++.+|... .+..+              ++..  ....+
T Consensus       228 ~~~~~~~~i~~~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  307 (357)
T 2b5w_A          228 SRQTPVEDVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVE  307 (357)
T ss_dssp             TTTSCGGGHHHHSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCCHH
T ss_pred             CCccCHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCCHH
Confidence            765443322   2389999999996   378999999999999998765 22211              1111  12468


Q ss_pred             HHHHHHHHHHCC--C-eeEeecccccC
Q 023273          260 ILEKLNPYFESG--K-VKAIIDPKGLL  283 (284)
Q Consensus       260 ~~~~~~~~~~~g--~-i~~~i~~~~~~  283 (284)
                      +++++++++++|  + +++.|+++|||
T Consensus       308 ~~~~~~~l~~~g~~~~~~~~i~~~~~l  334 (357)
T 2b5w_A          308 HFEAATVTFTKLPKWFLEDLVTGVHPL  334 (357)
T ss_dssp             HHHHHHHHHHHSCHHHHHHHEEEEEEG
T ss_pred             HHHHHHHHHHhCchhhhhhhcceeecH
Confidence            899999999999  9 68999999986

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=2.6e-42  Score=308.32  Aligned_cols=271  Identities=26%  Similarity=0.341  Sum_probs=218.4

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.++++    ++++++.|.|+|++|||+|||.+++||++|++.+.|.     ..+|.++|||++|+|+++|++++
T Consensus        12 mkA~v~~~~~~----l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-----~~~p~v~G~e~~G~V~~vG~~v~   82 (371)
T 3gqv_A           12 QTALTVNDHDE----VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF-----ATPWAFLGTDYAGTVVAVGSDVT   82 (371)
T ss_dssp             EEEEEECTTSC----EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC----------CCTTSCCCSEEEEEEEEECTTCC
T ss_pred             ceeEEEcCCCc----eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC-----CCCCccCccccEEEEEEeCCCCC
Confidence            89999998876    5775357889999999999999999999999888663     24589999999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-Hh-ccc----------
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ER-SAF----------  148 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~-~~~----------  148 (284)
                      +|++||||++.+..+.. +...+|+|++|+++|.+.++++|++++++++|++++++.|||+++ +. .++          
T Consensus        83 ~~~~GdrV~~~~~~~~~-~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~  161 (371)
T 3gqv_A           83 HIQVGDRVYGAQNEMCP-RTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPT  161 (371)
T ss_dssp             SCCTTCEEEEECCTTCT-TCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCC
T ss_pred             CCCCCCEEEEeccCCCC-CCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccc
Confidence            99999999988754433 234579999999999999999999999999999999999999999 45 442          


Q ss_pred             -CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC-----CCcccEEEeCC
Q 023273          149 -SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAV  222 (284)
Q Consensus       149 -~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~d~vid~~  222 (284)
                       ++|++|+|+|++|++|++++|+|+.+ |++|+++. +++|++.++++|+++++|++..++.+.     .+++|++|||+
T Consensus       162 ~~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~  239 (371)
T 3gqv_A          162 HSKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCI  239 (371)
T ss_dssp             CSSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESS
T ss_pred             cCCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECC
Confidence             89999999998899999999999995 99998886 789999999999999999876654331     44699999999


Q ss_pred             CC---cHHHHHhh-ccCCEEEEEcCCCC----CCceeEEE-------------------eccH-------HHHHHHHHHH
Q 023273          223 GQ---CDKALKAV-KEGGRVVSIIGSVT----PPASSFVL-------------------TSDG-------SILEKLNPYF  268 (284)
Q Consensus       223 g~---~~~~~~~l-~~~G~~v~~g~~~~----~~~~~~~~-------------------~~~~-------~~~~~~~~~~  268 (284)
                      |+   .+.++++| +++|+++.+|....    ...+....                   ....       +.++++++++
T Consensus       240 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~  319 (371)
T 3gqv_A          240 TNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLV  319 (371)
T ss_dssp             CSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence            96   47889999 58999999985432    11121110                   0111       2346888999


Q ss_pred             HCCCeeEe--ecccccC
Q 023273          269 ESGKVKAI--IDPKGLL  283 (284)
Q Consensus       269 ~~g~i~~~--i~~~~~~  283 (284)
                      ++|+|++.  ++++|||
T Consensus       320 ~~g~l~~~~~~~~~~~l  336 (371)
T 3gqv_A          320 EDGRLVHHPLRVVQGGF  336 (371)
T ss_dssp             HTTSSCCCCEEEEEECH
T ss_pred             HCCeeeCCcCeecCCcH
Confidence            99999875  4455664

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=4.2e-42  Score=306.03  Aligned_cols=268  Identities=27%  Similarity=0.371  Sum_probs=224.7

Q ss_pred             CeEEEEcccCCC-ccceEE-eccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCC
Q 023273            1 MKAWVYKEYGNS-QSVLKF-ETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ   78 (284)
Q Consensus         1 m~a~~~~~~g~~-~~~~~~-~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~   78 (284)
                      |||+++.+++.. .+.+++ + +.|.|+|++|||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|+++|++
T Consensus        24 MkA~~~~~~g~~~~~~l~~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~P~i~G~E~~G~V~~vG~~  101 (362)
T 2c0c_A           24 MQKLVVTRLSPNFREAVTLSR-DCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDP-SVKPPFDIGFEGIGEVVALGLS  101 (362)
T ss_dssp             EEEEEECSCCSSHHHHEEEEE-EEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCT-TCCSCEECCSEEEEEEEEECTT
T ss_pred             ceEEEEeecCCCccceeEEEe-ecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCC-CCCCCCCCCceeEEEEEEECCC
Confidence            899999998852 134788 8 88999999999999999999999999999987642 2357899999999999999999


Q ss_pred             CC-CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEE
Q 023273           79 VK-KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILV  156 (284)
Q Consensus        79 ~~-~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI  156 (284)
                      ++ +|++||||++..          +|+|+||+++|++.++++|+. + .++|+++.+++|||+++ +.+++++|++|+|
T Consensus       102 V~~~~~vGdrV~~~~----------~G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV  169 (362)
T 2c0c_A          102 ASARYTVGQAVAYMA----------PGSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLV  169 (362)
T ss_dssp             GGGTCCTTCEEEEEC----------SCCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEE
T ss_pred             ccCCCCCCCEEEEcc----------CCcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEE
Confidence            99 999999999864          599999999999999999996 3 46778888999999999 4689999999999


Q ss_pred             EcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-----CCCcccEEEeCCCC--cHHHH
Q 023273          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--CDKAL  229 (284)
Q Consensus       157 ~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g~--~~~~~  229 (284)
                      +|++|++|++++++|+.. |++|+++++++++++.++++|++.+++++..++.+     ..+++|++|||+|.  .+.++
T Consensus       170 ~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~  248 (362)
T 2c0c_A          170 TAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAV  248 (362)
T ss_dssp             TTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCTHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCHHHHHHHH
Confidence            999999999999999996 99999999999999999999999999886554322     14589999999996  48899


Q ss_pred             HhhccCCEEEEEcCCCCCC-----------c---------eeEEEec-------cHHHHHHHHHHHHCCCeeEeec----
Q 023273          230 KAVKEGGRVVSIIGSVTPP-----------A---------SSFVLTS-------DGSILEKLNPYFESGKVKAIID----  278 (284)
Q Consensus       230 ~~l~~~G~~v~~g~~~~~~-----------~---------~~~~~~~-------~~~~~~~~~~~~~~g~i~~~i~----  278 (284)
                      ++|+++|+++.+|......           .         .++....       ..++++++++++++|++++.+.    
T Consensus       249 ~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~  328 (362)
T 2c0c_A          249 DALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDL  328 (362)
T ss_dssp             HHEEEEEEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTT
T ss_pred             HHHhcCCEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccc
Confidence            9999999999998643110           1         1111111       2467999999999999998754    


Q ss_pred             ----ccccC
Q 023273          279 ----PKGLL  283 (284)
Q Consensus       279 ----~~~~~  283 (284)
                          ++|||
T Consensus       329 ~~~~~~~~l  337 (362)
T 2c0c_A          329 SPEGRFTGL  337 (362)
T ss_dssp             STTCSCBST
T ss_pred             cccccccCH
Confidence                56675

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=1.6e-42  Score=312.59  Aligned_cols=272  Identities=23%  Similarity=0.268  Sum_probs=224.6

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCC-CC-----CeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEE
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-RE-----DQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEK   74 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~-----~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~   74 (284)
                      |||+++.+++.    ++++ +.|.|+| ++     |||+|||.+++||++|++.+.|.++   .++|.++|||++|+|++
T Consensus         3 MkA~~~~~~~~----l~~~-~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~---~~~p~v~GhE~~G~V~~   74 (398)
T 2dph_A            3 NKSVVYHGTRD----LRVE-TVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI---VPKGHVLGHEITGEVVE   74 (398)
T ss_dssp             EEEEEEEETTE----EEEE-EECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC---CCTTCBCCCCEEEEEEE
T ss_pred             cEEEEEEcCCC----EEEE-EccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC---CCCCcccCCceEEEEEE
Confidence            89999998764    6888 8898987 68     9999999999999999999998642   35789999999999999


Q ss_pred             eCCCCCCCCCCCEEEEecC----ccc----------------------cCC---CCCCCceeeEEeeecC--ceeeCCCC
Q 023273           75 VGSQVKKFKVGDEVYGDIN----EKA----------------------LDH---PKRNGSLAEYTAVEEN--LLALKPKN  123 (284)
Q Consensus        75 vG~~~~~~~~Gd~V~~~~~----~~~----------------------~~~---~~~~g~~~~~~~~~~~--~~~~ip~~  123 (284)
                      +|+++++|++||||++.+.    .+.                      ..+   ...+|+|+||+++|.+  .++++|++
T Consensus        75 vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~  154 (398)
T 2dph_A           75 KGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDK  154 (398)
T ss_dssp             ECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSH
T ss_pred             ECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCC
Confidence            9999999999999987531    100                      001   1246999999999987  89999999


Q ss_pred             CCHHh----hhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCc
Q 023273          124 LSFVE----AASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD  198 (284)
Q Consensus       124 ~~~~~----aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~  198 (284)
                      +++++    +|+++.++.|||++++.+++++|++|+|+| +|++|++++|+|+.+ |+ +|++++++++|++.++++|++
T Consensus       155 ~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~  232 (398)
T 2dph_A          155 EQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAG-AGPVGRCAAAGARLL-GAACVIVGDQNPERLKLLSDAGFE  232 (398)
T ss_dssp             HHHHHTHHHHTTTTTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHTTTCE
T ss_pred             CChhhhcchhhhhcCHHHHHHHHHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCc
Confidence            99887    888899999999999889999999999999 599999999999996 88 899999999999999999995


Q ss_pred             EEeeCCCccc-cc-C-----CCcccEEEeCCCC-----------------cHHHHHhhccCCEEEEEcCCC--C------
Q 023273          199 LAIDYTKENI-ED-L-----PEKFDVVFDAVGQ-----------------CDKALKAVKEGGRVVSIIGSV--T------  246 (284)
Q Consensus       199 ~~~~~~~~~~-~~-~-----~~~~d~vid~~g~-----------------~~~~~~~l~~~G~~v~~g~~~--~------  246 (284)
                       +++++..++ .+ +     +.++|++||++|.                 .+.++++|+++|+++.+|...  .      
T Consensus       233 -~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~  311 (398)
T 2dph_A          233 -TIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNK  311 (398)
T ss_dssp             -EEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSH
T ss_pred             -EEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccccccccccc
Confidence             788765543 22 1     3479999999984                 368899999999999998762  1      


Q ss_pred             ---CCceeEE----------E----eccHHHHHHHHHHHHCCCee--E--eecccccC
Q 023273          247 ---PPASSFV----------L----TSDGSILEKLNPYFESGKVK--A--IIDPKGLL  283 (284)
Q Consensus       247 ---~~~~~~~----------~----~~~~~~~~~~~~~~~~g~i~--~--~i~~~~~~  283 (284)
                         ...+.+.          +    ....++++++++++++|+++  +  .|+++|||
T Consensus       312 ~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l  369 (398)
T 2dph_A          312 DAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITL  369 (398)
T ss_dssp             HHHTTEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECS
T ss_pred             cccCCcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcH
Confidence               1112211          1    11356789999999999999  6  68999987

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=4.3e-42  Score=302.36  Aligned_cols=274  Identities=26%  Similarity=0.330  Sum_probs=224.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++.+ ..++++ +.|.|+|++|||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|+++  +++
T Consensus         5 mka~~~~~~g~~-~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~i~G~E~~G~V~~~--~v~   79 (330)
T 1tt7_A            5 FQALQAEKNADD-VSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNI-VREYPLILGIDAAGTVVSS--NDP   79 (330)
T ss_dssp             EEEEEECCGGGS-CCCEEE-EEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTT-CSSCSEECCSEEEEEEEEC--SST
T ss_pred             ceEEEEecCCCC-cceeEe-ecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCC-cCCCCccccceEEEEEEEc--CCC
Confidence            899999998853 347898 88999999999999999999999999999886532 2357899999999999996  467


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH---hcccCCCC-EEEE
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE---RSAFSAGK-SILV  156 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~---~~~~~~g~-~vlI  156 (284)
                      +|++||||++....   .+...+|+|+||+++|++.++++|++++++++|++++++.|||.++.   ..++++|+ +|+|
T Consensus        80 ~~~vGdrV~~~~~~---~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV  156 (330)
T 1tt7_A           80 RFAEGDEVIATSYE---LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLV  156 (330)
T ss_dssp             TCCTTCEEEEESTT---BTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred             CCCCCCEEEEcccc---cCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEE
Confidence            89999999986421   12234799999999999999999999999999999999999998763   46789997 9999


Q ss_pred             EcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc---cccC-CCcccEEEeCCCC--cHHHHH
Q 023273          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IEDL-PEKFDVVFDAVGQ--CDKALK  230 (284)
Q Consensus       157 ~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~-~~~~d~vid~~g~--~~~~~~  230 (284)
                      +|++|++|++++++|+.+ |++|++++++++|++.++++|+++++|+++.+   .... .+++|++|||+|+  ...+++
T Consensus       157 ~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  235 (330)
T 1tt7_A          157 TGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLASLLS  235 (330)
T ss_dssp             ESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCTHHHHHHHT
T ss_pred             ECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcHHHHHHHHH
Confidence            998899999999999996 89999999999999999999999998864321   1222 3579999999996  478999


Q ss_pred             hhccCCEEEEEcCCCCC-----------CceeEEEe----c----cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          231 AVKEGGRVVSIIGSVTP-----------PASSFVLT----S----DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       231 ~l~~~G~~v~~g~~~~~-----------~~~~~~~~----~----~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +++++|+++.+|.....           ..+++...    .    ..+.++++.+++++|++++.|+++|||
T Consensus       236 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~i~~~~~l  307 (330)
T 1tt7_A          236 KIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQLLTIVDREVSL  307 (330)
T ss_dssp             TEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCSTTSEEEEECS
T ss_pred             hhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCcccccceEEcH
Confidence            99999999999865421           11222211    1    124577788888899999999999987

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.5e-42  Score=308.57  Aligned_cols=272  Identities=21%  Similarity=0.260  Sum_probs=221.9

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCC-CCe------EEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEE
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQ------VLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVE   73 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~-~~e------v~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~   73 (284)
                      |||+++.+++.    ++++ +.|.|+|+ ++|      |+|||.+++||++|++.+.|.++   .++|.++|||++|+|+
T Consensus         3 Mka~~~~~~~~----l~~~-~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~p~v~GhE~~G~V~   74 (398)
T 1kol_A            3 NRGVVYLGSGK----VEVQ-KIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT---AQVGLVLGHEITGEVI   74 (398)
T ss_dssp             EEEEEEEETTE----EEEE-EECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC---CCTTCBCCCCEEEEEE
T ss_pred             cEEEEEecCCc----eEEE-EecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC---CCCCcccCcccEEEEE
Confidence            89999998764    6888 88999997 898      99999999999999999998652   3568999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec----Ccc-----------c---------cCCC----CCCCceeeEEeeecC--ceeeCCCC
Q 023273           74 KVGSQVKKFKVGDEVYGDI----NEK-----------A---------LDHP----KRNGSLAEYTAVEEN--LLALKPKN  123 (284)
Q Consensus        74 ~vG~~~~~~~~Gd~V~~~~----~~~-----------~---------~~~~----~~~g~~~~~~~~~~~--~~~~ip~~  123 (284)
                      ++|+++++|++||||++.+    +.+           .         ..+.    ..+|+|+||+++|.+  .++++|++
T Consensus        75 ~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~  154 (398)
T 1kol_A           75 EKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDR  154 (398)
T ss_dssp             EECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCH
T ss_pred             EECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCC
Confidence            9999999999999998632    110           0         0011    236999999999986  89999999


Q ss_pred             CCHHh----hhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCc
Q 023273          124 LSFVE----AASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD  198 (284)
Q Consensus       124 ~~~~~----aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~  198 (284)
                      +++++    ++++++++.|||++++.+++++|++|+|+| +|++|++++|+|+.+ |+ +|++++++++|+++++++|++
T Consensus       155 ~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-aG~vG~~aiqlAk~~-Ga~~Vi~~~~~~~~~~~a~~lGa~  232 (398)
T 1kol_A          155 DKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAG-AGPVGLAAAASARLL-GAAVVIVGDLNPARLAHAKAQGFE  232 (398)
T ss_dssp             HHHHHTHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCE
T ss_pred             cchhhhcccccccccHHHHHHHHHHHcCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHcCCc
Confidence            98887    788899999999999888999999999999 699999999999996 87 688999999999999999997


Q ss_pred             EEeeCCCcc-ccc----C--CCcccEEEeCCCC------------------cHHHHHhhccCCEEEEEcCC-C-CC----
Q 023273          199 LAIDYTKEN-IED----L--PEKFDVVFDAVGQ------------------CDKALKAVKEGGRVVSIIGS-V-TP----  247 (284)
Q Consensus       199 ~~~~~~~~~-~~~----~--~~~~d~vid~~g~------------------~~~~~~~l~~~G~~v~~g~~-~-~~----  247 (284)
                       +++++..+ +.+    .  ++++|++||++|.                  .+.++++|+++|+++.+|.+ . .+    
T Consensus       233 -~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~  311 (398)
T 1kol_A          233 -IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVD  311 (398)
T ss_dssp             -EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSS
T ss_pred             -EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCcccccc
Confidence             77775432 221    1  3589999999985                  36889999999999999865 1 11    


Q ss_pred             -------Cce----------eEEEe--ccHHHHHHHHHHHHCCCee---EeecccccC
Q 023273          248 -------PAS----------SFVLT--SDGSILEKLNPYFESGKVK---AIIDPKGLL  283 (284)
Q Consensus       248 -------~~~----------~~~~~--~~~~~~~~~~~~~~~g~i~---~~i~~~~~~  283 (284)
                             ..+          .+...  ...+.++++++++++|+++   +.|+++|||
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l  369 (398)
T 1kol_A          312 AAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISL  369 (398)
T ss_dssp             HHHHTTCCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECG
T ss_pred             cccccccccccHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEEEEcH
Confidence                   111          11111  1356789999999999998   578999986

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=2.3e-41  Score=294.24  Aligned_cols=255  Identities=31%  Similarity=0.441  Sum_probs=215.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.+++.+   ..++ +.|.|+|++|||+|||.++++|++|++.+.|.++. ...+|.++|||++|+|+       
T Consensus         1 Mka~~~~~~g~~---~~l~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~i~G~e~~G~V~-------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGP---LELV-DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT-RLHPPFIPGMEVVGVVE-------   68 (302)
T ss_dssp             CEEEEECSTTSC---EEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS-CCCSSBCCCCEEEEEET-------
T ss_pred             CeEEEEcCCCCc---hheE-ECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCCcccceEEEEEE-------
Confidence            999999999987   4566 78899999999999999999999999999987643 23578999999999997       


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~ga  159 (284)
                          ||||++...         +|+|++|+++|++.++++|++++++++|+++++++|||+++. .. +++|++|+|+|+
T Consensus        69 ----GdrV~~~~~---------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga  134 (302)
T 1iz0_A           69 ----GRRYAALVP---------QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAA  134 (302)
T ss_dssp             ----TEEEEEECS---------SCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESST
T ss_pred             ----CcEEEEecC---------CcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECC
Confidence                999998752         699999999999999999999999999999999999999995 66 999999999998


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC-cccccCCCcccEEEeCCCC--cHHHHHhhccCC
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIEDLPEKFDVVFDAVGQ--CDKALKAVKEGG  236 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~d~vid~~g~--~~~~~~~l~~~G  236 (284)
                      +|++|++++++|+.+ |++|+++++++++.+.++++|++++++++. .++.+..+++|++|| +|.  .+.++++|+++|
T Consensus       135 ~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~~~~~~~~~~l~~~G  212 (302)
T 1iz0_A          135 AGALGTAAVQVARAM-GLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRGKEVEESLGLLAHGG  212 (302)
T ss_dssp             TBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSCTTHHHHHTTEEEEE
T ss_pred             CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCHHHHHHHHHhhccCC
Confidence            899999999999995 899999999999999999999999988765 443332378999999 985  588999999999


Q ss_pred             EEEEEcCCCCC-C----------ceeEEEe------ccHHHHHHHHH---HHHCCCeeEeecccccC
Q 023273          237 RVVSIIGSVTP-P----------ASSFVLT------SDGSILEKLNP---YFESGKVKAIIDPKGLL  283 (284)
Q Consensus       237 ~~v~~g~~~~~-~----------~~~~~~~------~~~~~~~~~~~---~~~~g~i~~~i~~~~~~  283 (284)
                      +++.+|..... .          .+++...      ...++++++++   ++++|++++.|+++|||
T Consensus       213 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l  279 (302)
T 1iz0_A          213 RLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRELRPVVGPVFPF  279 (302)
T ss_dssp             EEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTTTBCCCEEEEEEG
T ss_pred             EEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcCCcccccceEEcH
Confidence            99999865321 0          1122211      13578999999   99999999999999986

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.4e-41  Score=296.36  Aligned_cols=272  Identities=25%  Similarity=0.320  Sum_probs=219.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      ||++++.+++.+ ..++++ +.|.|+|++|||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|+++  +++
T Consensus         4 mka~~~~~~g~~-~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~G~E~~G~V~~~--~v~   78 (328)
T 1xa0_A            4 FQAFVVNKTETE-FTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKI-VKTYPFVPGIDLAGVVVSS--QHP   78 (328)
T ss_dssp             EEEEEEEEETTE-EEEEEE-EEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSS-CCSSSBCCCSEEEEEEEEC--CSS
T ss_pred             ceEEEEecCCCc-ceeEEE-eccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCC-CCCCCcccCcceEEEEEec--CCC
Confidence            899999999864 447888 88999999999999999999999999999886532 2357899999999999995  568


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH---HhcccCCCC-EEEE
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL---ERSAFSAGK-SILV  156 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al---~~~~~~~g~-~vlI  156 (284)
                      +|++||||++....   .+...+|+|+||+++|++.++++|++++++++|++++++.|||.++   ...++++|+ +|+|
T Consensus        79 ~~~vGdrV~~~~~~---~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV  155 (328)
T 1xa0_A           79 RFREGDEVIATGYE---IGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLV  155 (328)
T ss_dssp             SCCTTCEEEEESTT---BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred             CCCCCCEEEEcccc---CCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEE
Confidence            89999999986421   1223469999999999999999999999999999999999999876   346789997 9999


Q ss_pred             EcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc---cccC-CCcccEEEeCCCC--cHHHHH
Q 023273          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IEDL-PEKFDVVFDAVGQ--CDKALK  230 (284)
Q Consensus       157 ~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~-~~~~d~vid~~g~--~~~~~~  230 (284)
                      +|++|++|++++|+|+.+ |++|++++++++|++.++++|+++++|+++.+   .... .+++|++|||+|+  ...+++
T Consensus       156 ~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  234 (328)
T 1xa0_A          156 TGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLS  234 (328)
T ss_dssp             SSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTTTTHHHHHH
T ss_pred             ecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcHHHHHHHHH
Confidence            998899999999999996 89999999999999999999999999876432   1122 3579999999985  588999


Q ss_pred             hhccCCEEEEEcCCCC-CC----------ceeEEEe----cc----HHHHHHHHHHHHCCCeeEeecccccC
Q 023273          231 AVKEGGRVVSIIGSVT-PP----------ASSFVLT----SD----GSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       231 ~l~~~G~~v~~g~~~~-~~----------~~~~~~~----~~----~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      +++++|+++.+|.... +.          .+++...    ..    .+.++++.+++++| +++ ++++|||
T Consensus       235 ~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~~-~~~~~~l  304 (328)
T 1xa0_A          235 RMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-LER-IAQEISL  304 (328)
T ss_dssp             TEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-HHH-HEEEEEG
T ss_pred             hhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-Cce-eeeEeCH
Confidence            9999999999986532 11          1222211    11    24577788888888 887 4688886

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=6.1e-41  Score=295.72  Aligned_cols=263  Identities=25%  Similarity=0.284  Sum_probs=218.9

Q ss_pred             CeEEEEcc--cC--CCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccc----eeEEE
Q 023273            1 MKAWVYKE--YG--NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYD----VAGVV   72 (284)
Q Consensus         1 m~a~~~~~--~g--~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e----~~G~V   72 (284)
                      ||+++++.  +|  .+ +.++++ +.|.|+|++|||+|||.+++||++|++.+.+...   ..+|.++|||    ++|+|
T Consensus         8 mka~v~~~~~~g~~~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~---~~~p~~~G~e~g~~~~G~V   82 (336)
T 4b7c_A            8 NRQYQLAQRPSGLPGR-DTFSFV-ETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS---YIPPVGIGEVMRALGVGKV   82 (336)
T ss_dssp             EEEEEECSCCSSSCCT-TSEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC---SSCCCCTTSBCCCEEEEEE
T ss_pred             ccEEEEEecCCCCCCC-CceEEE-eccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc---cCCCCCCCcccCCceEEEE
Confidence            79999986  23  23 558999 8999999999999999999999999988876432   2346667777    89999


Q ss_pred             EEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhh--hcccchHHHHHHHH-HhcccC
Q 023273           73 EKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEA--ASLPLATETAYEGL-ERSAFS  149 (284)
Q Consensus        73 ~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a--a~~~~~~~ta~~al-~~~~~~  149 (284)
                      ++  +++++|++||||++            .|+|+||+++|++.++++|+++++.++  ++++++++|||+++ +.++++
T Consensus        83 ~~--~~v~~~~vGdrV~~------------~G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~  148 (336)
T 4b7c_A           83 LV--SKHPGFQAGDYVNG------------ALGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPK  148 (336)
T ss_dssp             EE--ECSTTCCTTCEEEE------------ECCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCC
T ss_pred             Ee--cCCCCCCCCCEEec------------cCCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCC
Confidence            98  45889999999997            489999999999999999999977666  77899999999999 789999


Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcEEeeCCCccccc-----CCCcccEEEeCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIED-----LPEKFDVVFDAVG  223 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g  223 (284)
                      +|++|+|+|++|++|++++++++.. |++|+++++++++.+.+ +++|++.++|+...++.+     ..+++|++|||+|
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  227 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVG  227 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCC
Confidence            9999999998899999999999995 99999999999999999 899999999887655333     1458999999999


Q ss_pred             C--cHHHHHhhccCCEEEEEcCCC-----C----CC--------ceeEEEe--c-----cHHHHHHHHHHHHCCCeeEee
Q 023273          224 Q--CDKALKAVKEGGRVVSIIGSV-----T----PP--------ASSFVLT--S-----DGSILEKLNPYFESGKVKAII  277 (284)
Q Consensus       224 ~--~~~~~~~l~~~G~~v~~g~~~-----~----~~--------~~~~~~~--~-----~~~~~~~~~~~~~~g~i~~~i  277 (284)
                      +  ...++++|+++|+++.+|...     .    +.        .+++...  .     ..++++++++++++|++++.+
T Consensus       228 ~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  307 (336)
T 4b7c_A          228 GEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSRE  307 (336)
T ss_dssp             HHHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCE
T ss_pred             cchHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccce
Confidence            5  588999999999999997643     1    11        1122111  1     137899999999999999988


Q ss_pred             cccccC
Q 023273          278 DPKGLL  283 (284)
Q Consensus       278 ~~~~~~  283 (284)
                      ..++||
T Consensus       308 ~~~~~l  313 (336)
T 4b7c_A          308 DIVEGL  313 (336)
T ss_dssp             EEEECG
T ss_pred             eeecCH
Confidence            877775

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=2.7e-41  Score=302.52  Aligned_cols=266  Identities=21%  Similarity=0.225  Sum_probs=214.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC-------------------------
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-------------------------   55 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-------------------------   55 (284)
                      ||+++......   .++++ +.|.|+|++|||+|||.+++||++|++.+.|.++.                         
T Consensus         8 mka~v~~~~~~---~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~   83 (379)
T 3iup_A            8 LRSRIKSSGEL---ELSLD-SIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRS   83 (379)
T ss_dssp             EEEEECTTSEE---EEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHH
T ss_pred             HHHHHhcCCCC---ceEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccc
Confidence            78887764332   37998 89999999999999999999999999999885310                         


Q ss_pred             --CCCCCCcccccceeEEEEEeCCCC-CCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcc
Q 023273           56 --TDSPLPTIPGYDVAGVVEKVGSQV-KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL  132 (284)
Q Consensus        56 --~~~~~p~~~G~e~~G~V~~vG~~~-~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~  132 (284)
                        ...++|.++|||++|+|+++|+++ ++|++||||++..          +|+|+||+++|++.++++|++++++++|++
T Consensus        84 ~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~----------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  153 (379)
T 3iup_A           84 MAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG----------GAMYSQYRCIPADQCLVLPEGATPADGASS  153 (379)
T ss_dssp             HGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC----------SCCSBSEEEEEGGGEEECCTTCCHHHHTTS
T ss_pred             cccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC----------CCcceeEEEeCHHHeEECCCCCCHHHHHhh
Confidence              023468899999999999999999 8899999999965          599999999999999999999999999999


Q ss_pred             cchHHHHHHHHHhcccCCCCEEEEEc-CCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC
Q 023273          133 PLATETAYEGLERSAFSAGKSILVLG-GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL  211 (284)
Q Consensus       133 ~~~~~ta~~al~~~~~~~g~~vlI~g-a~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  211 (284)
                      ++..+|||++++... ++|++|+|+| ++|++|++++|+|+.+ |++|++++++++|++.++++|+++++|++..++.+.
T Consensus       154 ~~~~~ta~~~~~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~  231 (379)
T 3iup_A          154 FVNPLTALGMVETMR-LEGHSALVHTAAASNLGQMLNQICLKD-GIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQD  231 (379)
T ss_dssp             SHHHHHHHHHHHHHH-HTTCSCEEESSTTSHHHHHHHHHHHHH-TCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHH
T ss_pred             hhhHHHHHHHHHHhc-cCCCEEEEECCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHH
Confidence            999999998887666 8999999996 7999999999999996 999999999999999999999999999876654332


Q ss_pred             ------CCcccEEEeCCCC---cHHHHHhhc-----cC-----------CEEEEEcCCCC-C--------CceeEEEec-
Q 023273          212 ------PEKFDVVFDAVGQ---CDKALKAVK-----EG-----------GRVVSIIGSVT-P--------PASSFVLTS-  256 (284)
Q Consensus       212 ------~~~~d~vid~~g~---~~~~~~~l~-----~~-----------G~~v~~g~~~~-~--------~~~~~~~~~-  256 (284)
                            ++++|++|||+|+   .+.++++|+     ++           |+++.+|.... +        ..+.+.... 
T Consensus       232 v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~~~~~~~~~~~~~~i~g~~~  311 (379)
T 3iup_A          232 LTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFNRNFGMAWGMGGWLL  311 (379)
T ss_dssp             HHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEEEEEECCCSCSCEEEEECCH
T ss_pred             HHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCCccccccccccceEEEEEEe
Confidence                  2479999999995   367778875     44           55555544321 0        111111100 


Q ss_pred             -------cH----HHHHHHHHHHHCCCeeEeecccccC
Q 023273          257 -------DG----SILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       257 -------~~----~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                             ..    +.++++++++++ .+++.|+++|||
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l  348 (379)
T 3iup_A          312 FPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISL  348 (379)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEH
T ss_pred             eeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecH
Confidence                   12    345777777777 599999999986

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=2.3e-40  Score=320.24  Aligned_cols=261  Identities=27%  Similarity=0.361  Sum_probs=222.8

Q ss_pred             EEEEcccCCCccceEEecccc--CCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            3 AWVYKEYGNSQSVLKFETNVE--VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         3 a~~~~~~g~~~~~~~~~~~~~--~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      .+.+..+|.+ +.++++ +.+  .|+|++|||+|+|.++|||++|++.+.|.++     .|.++|||++|+|+++|++++
T Consensus       212 ~l~~~~~G~~-~~L~~~-~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~-----~~~~lG~E~aG~V~~vG~~V~  284 (795)
T 3slk_A          212 RLEATRPGSL-DGLALV-DEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP-----GVASLGSEGAGVVVETGPGVT  284 (795)
T ss_dssp             CEEESSTTSS-TTEEEC-CCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS-----SCCCSCCCEEEEEEEECSSCC
T ss_pred             EEecCCCCCc-cceEEE-eCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC-----CCccccceeEEEEEEeCCCCC
Confidence            4567778877 778998 665  3678999999999999999999999998763     355799999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga  159 (284)
                      +|++||||++..          .|+|++|++++.+.++++|++++++++|+++++++|||+++ +.+++++|++|||+|+
T Consensus       285 ~~~vGDrV~~~~----------~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~ga  354 (795)
T 3slk_A          285 GLAPGDRVMGMI----------PKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSA  354 (795)
T ss_dssp             SSCTTCEEEECC----------SSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEEST
T ss_pred             cCCCCCEEEEEe----------cCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecC
Confidence            999999999865          59999999999999999999999999999999999999998 6789999999999999


Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC--cHHHHHh
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKA  231 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~--~~~~~~~  231 (284)
                      +|++|++++|+|+.+ |++|+++++++ |.+.++ +|++++++++..++.+.      ++|+|+|||+.|+  .+.++++
T Consensus       355 aGgvG~~aiqlAk~~-Ga~V~~t~~~~-k~~~l~-lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~  431 (795)
T 3slk_A          355 AGGVGMAAIQLARHL-GAEVYATASED-KWQAVE-LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRM  431 (795)
T ss_dssp             TBHHHHHHHHHHHHT-TCCEEEECCGG-GGGGSC-SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCCTTTTHHHHTS
T ss_pred             CCHHHHHHHHHHHHc-CCEEEEEeChH-Hhhhhh-cChhheeecCChhHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHH
Confidence            999999999999996 99999988665 555555 89999999876655432      4689999999885  5899999


Q ss_pred             hccCCEEEEEcCCCCC---------CceeEEEec--------cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          232 VKEGGRVVSIIGSVTP---------PASSFVLTS--------DGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       232 l~~~G~~v~~g~~~~~---------~~~~~~~~~--------~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      |+++|+++.+|.....         .++.+....        ..+.++++++++++|+|+|.++++|||
T Consensus       432 l~~~Gr~v~iG~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~~l  500 (795)
T 3slk_A          432 LPRGGRFLELGKTDVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTAWDV  500 (795)
T ss_dssp             CTTCEEEEECCSTTCCCHHHHHHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEG
T ss_pred             hcCCCEEEEeccccccCcccccccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCCcceeEcH
Confidence            9999999999875422         223332211        246799999999999999999999986

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=2.6e-40  Score=294.92  Aligned_cols=267  Identities=19%  Similarity=0.232  Sum_probs=216.3

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCC-CeEEEEEeEeecCHHHHHHHcC--CCCCCCCCC---CcccccceeEEEEE
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLRE-DQVLIKVVAAALNPIDFKRMLG--AFSATDSPL---PTIPGYDVAGVVEK   74 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~-~ev~V~v~~~~i~~~d~~~~~g--~~~~~~~~~---p~~~G~e~~G~V~~   74 (284)
                      |||+++.+++++   ++++ +.|.|+|++ |||+|||.+++||++|++.+.|  .++  ..++   |.++|||++|+|++
T Consensus         1 MkA~~~~~~g~~---l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~~~~~~p~v~G~E~~G~V~~   74 (366)
T 2cdc_A            1 MKAIIVKPPNAG---VQVK-DVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLS--TLPKGKDFLVLGHEAIGVVEE   74 (366)
T ss_dssp             CEEEEECTTSCC---CEEE-ECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC---------CCSCEECCSEEEEEECS
T ss_pred             CeEEEEeCCCCc---eEEE-ECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCC--CCCcCCCCCcCCcceEEEEEe
Confidence            999999999874   6888 889999999 9999999999999999999998  543  1245   89999999999998


Q ss_pred             eCCCCCCCCCCCEEEEecCc----c--------------ccC--CCC-CCCceeeEEeeecCceeeCCCCCCHHhhhccc
Q 023273           75 VGSQVKKFKVGDEVYGDINE----K--------------ALD--HPK-RNGSLAEYTAVEENLLALKPKNLSFVEAASLP  133 (284)
Q Consensus        75 vG~~~~~~~~Gd~V~~~~~~----~--------------~~~--~~~-~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  133 (284)
                        ++ ++|++||||++.+..    +              ...  +.. .+|+|+||+++|++.++++|++++ +++ +++
T Consensus        75 --~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~A-al~  149 (366)
T 2cdc_A           75 --SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIG-ILA  149 (366)
T ss_dssp             --CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTG-GGH
T ss_pred             --CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhh-hhc
Confidence              77 899999999875311    0              000  222 469999999999999999999999 775 577


Q ss_pred             chHHHHHHHHH-----hcccC--C-------CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh---hhHHHHHHcC
Q 023273          134 LATETAYEGLE-----RSAFS--A-------GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST---AKLDLLRSLG  196 (284)
Q Consensus       134 ~~~~ta~~al~-----~~~~~--~-------g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~---~~~~~~~~~g  196 (284)
                      .++.|||+++.     ..+++  +       |++|+|+|+ |++|++++++++.. |++|+++++++   ++.+.++++|
T Consensus       150 ~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~~g  227 (366)
T 2cdc_A          150 QPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEETK  227 (366)
T ss_dssp             HHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHHHT
T ss_pred             CcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHHhC
Confidence            78899999997     78888  8       999999997 99999999999996 88999999998   8999999999


Q ss_pred             CcEEeeCCCcccccC----CCcccEEEeCCCC---c-HHHHHhhccCCEEEEEcCCCCC-Ccee-------------EE-
Q 023273          197 ADLAIDYTKENIEDL----PEKFDVVFDAVGQ---C-DKALKAVKEGGRVVSIIGSVTP-PASS-------------FV-  253 (284)
Q Consensus       197 ~~~~~~~~~~~~~~~----~~~~d~vid~~g~---~-~~~~~~l~~~G~~v~~g~~~~~-~~~~-------------~~-  253 (284)
                      ++.+ | ++ ++.+.    .+++|++||++|.   . +.++++|+++|+++.+|..... ..++             +. 
T Consensus       228 a~~v-~-~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g  304 (366)
T 2cdc_A          228 TNYY-N-SS-NGYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIG  304 (366)
T ss_dssp             CEEE-E-CT-TCSHHHHHHHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEEE
T ss_pred             Ccee-c-hH-HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEEE
Confidence            9877 7 44 32221    2579999999996   3 6789999999999999876532 1111             11 


Q ss_pred             -EeccHHHHHHHHHHHHCCC------eeEeecccccC
Q 023273          254 -LTSDGSILEKLNPYFESGK------VKAIIDPKGLL  283 (284)
Q Consensus       254 -~~~~~~~~~~~~~~~~~g~------i~~~i~~~~~~  283 (284)
                       .....++++++++++++|+      +++.|+++|||
T Consensus       305 ~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l  341 (366)
T 2cdc_A          305 LVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSI  341 (366)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEET
T ss_pred             ecCCCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcH
Confidence             1124688999999999999      66889999987

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.9e-39  Score=288.43  Aligned_cols=266  Identities=24%  Similarity=0.319  Sum_probs=218.8

Q ss_pred             CeEEEE-ccc---CCC-ccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCC----CCCCCCCCCcccccceeE
Q 023273            1 MKAWVY-KEY---GNS-QSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGA----FSATDSPLPTIPGYDVAG   70 (284)
Q Consensus         1 m~a~~~-~~~---g~~-~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~----~~~~~~~~p~~~G~e~~G   70 (284)
                      ||++++ +.+   |.+ ...++++ +.|.|+| ++|||+|||.+++||++|++.+.+.    ++ .+..+|.++|||++|
T Consensus         9 mka~v~~~~~~~~g~p~~~~l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~-~~~~~p~v~G~E~~G   86 (357)
T 2zb4_A            9 VQRVVLNSRPGKNGNPVAENFRME-EVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYI-TPWQLSQVVDGGGIG   86 (357)
T ss_dssp             EEEEEECCCCCTTSCCCGGGEEEE-EEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSS-CCCCBTSBCEEEEEE
T ss_pred             ceEEEEeccCCCCCCCCcCceEEE-eecCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccc-CCCCCCccccccEEE
Confidence            899999 565   433 2458998 8899999 9999999999999999999877652    21 133568899999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCC-----CHHhhhcccchHHHHHHHH-H
Q 023273           71 VVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNL-----SFVEAASLPLATETAYEGL-E  144 (284)
Q Consensus        71 ~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~-----~~~~aa~~~~~~~ta~~al-~  144 (284)
                      +|++  +++++|++||||++.           .|+|+||+++|++.++++|+++     +.+ +++++.+++|||+++ +
T Consensus        87 ~V~~--~~v~~~~vGdrV~~~-----------~G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~  152 (357)
T 2zb4_A           87 IIEE--SKHTNLTKGDFVTSF-----------YWPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQE  152 (357)
T ss_dssp             EEEE--ECSTTCCTTCEEEEE-----------EEESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHH
T ss_pred             EEEe--cCCCCCCCCCEEEec-----------CCCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHH
Confidence            9999  889999999999986           3799999999999999999998     544 678899999999999 7


Q ss_pred             hcccCCC--CEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHH-cCCcEEeeCCCccccc-----CCCcc
Q 023273          145 RSAFSAG--KSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-LGADLAIDYTKENIED-----LPEKF  215 (284)
Q Consensus       145 ~~~~~~g--~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~-----~~~~~  215 (284)
                      .+++++|  ++|+|+|++|++|++++++++.. |+ +|+++++++++.+.+++ +|++.++|+.+.++.+     ..+++
T Consensus       153 ~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~  231 (357)
T 2zb4_A          153 KGHITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGV  231 (357)
T ss_dssp             HSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCE
T ss_pred             hcCCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCC
Confidence            8999999  99999998899999999999995 88 99999999999998886 9998888876544322     12379


Q ss_pred             cEEEeCCCC--cHHHHHhhccCCEEEEEcCCCC---CCc-----------------eeEEEe--c-----cHHHHHHHHH
Q 023273          216 DVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT---PPA-----------------SSFVLT--S-----DGSILEKLNP  266 (284)
Q Consensus       216 d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~---~~~-----------------~~~~~~--~-----~~~~~~~~~~  266 (284)
                      |++|||+|.  ...++++|+++|+++.+|....   ...                 +++...  .     ..++++++++
T Consensus       232 d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  311 (357)
T 2zb4_A          232 DVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQ  311 (357)
T ss_dssp             EEEEESCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHH
T ss_pred             CEEEECCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHH
Confidence            999999995  5889999999999999976431   111                 111111  1     1567999999


Q ss_pred             HHHCCCeeEeecccccC
Q 023273          267 YFESGKVKAIIDPKGLL  283 (284)
Q Consensus       267 ~~~~g~i~~~i~~~~~~  283 (284)
                      ++++|++++.+..+|||
T Consensus       312 l~~~g~l~~~~~~~~~l  328 (357)
T 2zb4_A          312 WFKEGKLKIKETVINGL  328 (357)
T ss_dssp             HHHTTCCCCCEEEEECG
T ss_pred             HHHcCCCcCccceecCH
Confidence            99999999887777875

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1.1e-36  Score=268.26  Aligned_cols=261  Identities=23%  Similarity=0.323  Sum_probs=210.1

Q ss_pred             CeEEEEccc--CCC-ccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCC
Q 023273            1 MKAWVYKEY--GNS-QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS   77 (284)
Q Consensus         1 m~a~~~~~~--g~~-~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   77 (284)
                      ||++++..+  |.+ ...++++ +.|.|+|++|||+|||.+++||+.|... ..     +.++|.++|||++|+|++.  
T Consensus         8 mka~~~~~~~~g~~~~~~l~~~-e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~~-----~~~~p~~~g~e~~G~Vv~~--   78 (333)
T 1v3u_A            8 AKSWTLKKHFQGKPTQSDFELK-TVELPPLKNGEVLLEALFLSVDPYMRIA-SK-----RLKEGAVMMGQQVARVVES--   78 (333)
T ss_dssp             EEEEEECC-----CCGGGEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHH-TT-----TCCTTSBCCCCEEEEEEEE--
T ss_pred             ccEEEEeecCCCCCCccceEEE-eCCCCCCCCCEEEEEEEEeccCHHHccc-cC-----cCCCCcccccceEEEEEec--
Confidence            799999885  432 1458998 8899999999999999999999998732 11     2356788999999999984  


Q ss_pred             CCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCC----CCHHh-hhcccchHHHHHHHH-HhcccCCC
Q 023273           78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKN----LSFVE-AASLPLATETAYEGL-ERSAFSAG  151 (284)
Q Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~----~~~~~-aa~~~~~~~ta~~al-~~~~~~~g  151 (284)
                      ++++|++||||++            .|+|++|+++|.+.++++|++    +++++ +|+++++++|||+++ +.+++++|
T Consensus        79 ~v~~~~vGdrV~~------------~g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g  146 (333)
T 1v3u_A           79 KNSAFPAGSIVLA------------QSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGG  146 (333)
T ss_dssp             SCTTSCTTCEEEE------------CCCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSS
T ss_pred             CCCCCCCCCEEEe------------cCceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCC
Confidence            6788999999988            378999999999999999997    88877 478899999999999 67899999


Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC-ccccc-----CCCcccEEEeCCCC-
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIED-----LPEKFDVVFDAVGQ-  224 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~-----~~~~~d~vid~~g~-  224 (284)
                      ++|+|+|++|++|++++++++.. |++|+++++++++.+.++++|++.++|..+ +++.+     ..+++|++||++|. 
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  225 (333)
T 1v3u_A          147 ETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGE  225 (333)
T ss_dssp             CEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCHH
T ss_pred             CEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCChH
Confidence            99999998899999999999995 999999999999999999999988888765 33322     13579999999995 


Q ss_pred             -cHHHHHhhccCCEEEEEcCCCC------CC---c--------eeEEEe---c-----cHHHHHHHHHHHHCCCeeEeec
Q 023273          225 -CDKALKAVKEGGRVVSIIGSVT------PP---A--------SSFVLT---S-----DGSILEKLNPYFESGKVKAIID  278 (284)
Q Consensus       225 -~~~~~~~l~~~G~~v~~g~~~~------~~---~--------~~~~~~---~-----~~~~~~~~~~~~~~g~i~~~i~  278 (284)
                       ...++++|+++|+++.+|....      +.   .        +++...   .     ..++++++++++++|++++.+.
T Consensus       226 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~  305 (333)
T 1v3u_A          226 FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEH  305 (333)
T ss_dssp             HHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEE
T ss_pred             HHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCccc
Confidence             5789999999999999986532      10   1        111111   1     1467889999999999998766


Q ss_pred             ccccC
Q 023273          279 PKGLL  283 (284)
Q Consensus       279 ~~~~~  283 (284)
                      .++||
T Consensus       306 ~~~~l  310 (333)
T 1v3u_A          306 VTKGF  310 (333)
T ss_dssp             EEECG
T ss_pred             cccCH
Confidence            66665

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=3.6e-36  Score=266.10  Aligned_cols=268  Identities=26%  Similarity=0.347  Sum_probs=210.0

Q ss_pred             CeEEEEccc--CCCcc-ceEEec-cccCCC-CCCCeEEEEEeEeecCHHHHHHHcCCCCCCC--CCCCcccccceeEEEE
Q 023273            1 MKAWVYKEY--GNSQS-VLKFET-NVEVPS-LREDQVLIKVVAAALNPIDFKRMLGAFSATD--SPLPTIPGYDVAGVVE   73 (284)
Q Consensus         1 m~a~~~~~~--g~~~~-~~~~~~-~~~~~~-~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~--~~~p~~~G~e~~G~V~   73 (284)
                      ||++++.+.  +.+.. .+++++ +.+.|+ |++|||+|||.++++++.|. .+.|.+....  ..+|.++|||++|++.
T Consensus         5 mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G~~~   83 (345)
T 2j3h_A            5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQGYGV   83 (345)
T ss_dssp             EEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEEEEE
T ss_pred             ceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeecceE
Confidence            689998876  55522 477751 456676 89999999999999988875 4445431111  2368899999999999


Q ss_pred             E--eCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCc--eeeCCC---CCCHHhhhcccchHHHHHHHH-Hh
Q 023273           74 K--VGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENL--LALKPK---NLSFVEAASLPLATETAYEGL-ER  145 (284)
Q Consensus        74 ~--vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~ip~---~~~~~~aa~~~~~~~ta~~al-~~  145 (284)
                      +  +|+++++|++||||++.            |+|++|++++.+.  ++++|+   +++++ +|+++++++|||+++ +.
T Consensus        84 ~GvV~~~v~~~~vGdrV~~~------------g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~  150 (345)
T 2j3h_A           84 SRIIESGHPDYKKGDLLWGI------------VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEV  150 (345)
T ss_dssp             EEEEEECSTTCCTTCEEEEE------------EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTT
T ss_pred             EEEEecCCCCCCCCCEEEee------------cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHH
Confidence            9  99999999999999873            7899999998876  999996   35554 678888999999999 67


Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEeeCCCc-ccccC-----CCcccEE
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKE-NIEDL-----PEKFDVV  218 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~-----~~~~d~v  218 (284)
                      +++++|++|+|+|++|++|++++++++.. |++|+++++++++.+.++ ++|++.++|+.+. ++.+.     .+++|++
T Consensus       151 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~v  229 (345)
T 2j3h_A          151 CSPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIY  229 (345)
T ss_dssp             SCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEE
T ss_pred             hCCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEE
Confidence            89999999999998899999999999995 899999999999999998 7999888887542 33221     3579999


Q ss_pred             EeCCCC--cHHHHHhhccCCEEEEEcCCCC------CCc----------eeEEEe---c----cHHHHHHHHHHHHCCCe
Q 023273          219 FDAVGQ--CDKALKAVKEGGRVVSIIGSVT------PPA----------SSFVLT---S----DGSILEKLNPYFESGKV  273 (284)
Q Consensus       219 id~~g~--~~~~~~~l~~~G~~v~~g~~~~------~~~----------~~~~~~---~----~~~~~~~~~~~~~~g~i  273 (284)
                      ||++|.  ...++++|+++|+++.+|....      ...          +++...   .    ..+.++++++++++|++
T Consensus       230 i~~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i  309 (345)
T 2j3h_A          230 FENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKI  309 (345)
T ss_dssp             EESSCHHHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSS
T ss_pred             EECCCHHHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCC
Confidence            999995  5789999999999999976431      111          111110   1    12458999999999999


Q ss_pred             eEeecccccC
Q 023273          274 KAIIDPKGLL  283 (284)
Q Consensus       274 ~~~i~~~~~~  283 (284)
                      ++.++++|||
T Consensus       310 ~~~~~~~~~l  319 (345)
T 2j3h_A          310 TYVEDVADGL  319 (345)
T ss_dssp             CCCEEEEESG
T ss_pred             cCcccccCCH
Confidence            9988888886

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.96  E-value=1.3e-28  Score=260.32  Aligned_cols=255  Identities=21%  Similarity=0.252  Sum_probs=201.6

Q ss_pred             cccCCCccceEEeccccCCC-CC--CCeEEEEEeEeecCHHHHHHHcCCCCCC-----CCCCCcccccceeEEEEEeCCC
Q 023273            7 KEYGNSQSVLKFETNVEVPS-LR--EDQVLIKVVAAALNPIDFKRMLGAFSAT-----DSPLPTIPGYDVAGVVEKVGSQ   78 (284)
Q Consensus         7 ~~~g~~~~~~~~~~~~~~~~-~~--~~ev~V~v~~~~i~~~d~~~~~g~~~~~-----~~~~p~~~G~e~~G~V~~vG~~   78 (284)
                      ..+|.. +.+.+. +.+... +.  ++||+|+|.++|+|+.|++...|.++..     ....|+++|+|++|+|.     
T Consensus      1536 ~~~g~l-~sl~~~-~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----- 1608 (2512)
T 2vz8_A         1536 LSRGDL-SSIRWV-CSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----- 1608 (2512)
T ss_dssp             SSTTCT-TSEEEE-ECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET-----
T ss_pred             cCCCCc-CceEEE-ecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc-----
Confidence            344554 567776 444332 33  7999999999999999999999876422     12346789999999883     


Q ss_pred             CCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEE
Q 023273           79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVL  157 (284)
Q Consensus        79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~  157 (284)
                           +||+|+++..         .|+|++|+++|++.++++|++++++++|+++++++|||+++ ..+++++|++|||+
T Consensus      1609 -----vGdrV~g~~~---------~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~ 1674 (2512)
T 2vz8_A         1609 -----SGRRVMGMVP---------AEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIH 1674 (2512)
T ss_dssp             -----TSCCEEEECS---------SCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEET
T ss_pred             -----cCCEEEEeec---------CCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEE
Confidence                 7999998753         58999999999999999999999999999999999999999 57899999999999


Q ss_pred             cCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcEEeeCCCccccc----C--CCcccEEEeCCCC--c
Q 023273          158 GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--C  225 (284)
Q Consensus       158 ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~  225 (284)
                      |++|++|++++++|+.+ |++|++++.+++|.+.+++    +|++++++++..++.+    .  ++|+|+|||+.+.  .
T Consensus      1675 gaaGgVG~aAiqlAk~~-Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~~l 1753 (2512)
T 2vz8_A         1675 SGSGGVGQAAIAIALSR-GCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKL 1753 (2512)
T ss_dssp             TTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHHHH
T ss_pred             eCChHHHHHHHHHHHHc-CCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCchHH
Confidence            99999999999999995 9999999999999999986    6788889887655332    1  3589999999874  5


Q ss_pred             HHHHHhhccCCEEEEEcCCCC-----------CCceeEEEe-------ccHHHHHHHHH----HHHCCCeeEeecccccC
Q 023273          226 DKALKAVKEGGRVVSIIGSVT-----------PPASSFVLT-------SDGSILEKLNP----YFESGKVKAIIDPKGLL  283 (284)
Q Consensus       226 ~~~~~~l~~~G~~v~~g~~~~-----------~~~~~~~~~-------~~~~~~~~~~~----~~~~g~i~~~i~~~~~~  283 (284)
                      ..++++|+++|+++.+|....           ...+++...       ...+.++++++    ++.+|.+++.|+++|||
T Consensus      1754 ~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l 1833 (2512)
T 2vz8_A         1754 QASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPR 1833 (2512)
T ss_dssp             HHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEES
T ss_pred             HHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEecH
Confidence            889999999999999985321           012222211       01234444444    45688999999999986

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.85  E-value=1.1e-20  Score=153.75  Aligned_cols=166  Identities=25%  Similarity=0.376  Sum_probs=123.4

Q ss_pred             CceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273          115 NLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (284)
Q Consensus       115 ~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~  193 (284)
                      +.++++|++++++++|++++++.|||+++ +..++++|++|+|+|++|++|++++++++.. |++|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Confidence            46789999999999999999999999999 4689999999999999999999999999996 899999999999998899


Q ss_pred             HcCCcEEeeCCCccccc-----C-CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCC--C---------CceeEEE
Q 023273          194 SLGADLAIDYTKENIED-----L-PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT--P---------PASSFVL  254 (284)
Q Consensus       194 ~~g~~~~~~~~~~~~~~-----~-~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~--~---------~~~~~~~  254 (284)
                      ++|.+.+++..+.+..+     . .+++|++||++|.  .+.++++|+++|+++.+|....  +         ..+.+..
T Consensus        81 ~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  160 (198)
T 1pqw_A           81 RLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSV  160 (198)
T ss_dssp             TTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEE
T ss_pred             HcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcCcCcCChhHhcCCcEEEE
Confidence            99988888765443221     1 3479999999985  4889999999999999986431  1         1122221


Q ss_pred             ---------ec--cHHHHHHHHHHHHCCCeeEeecccc
Q 023273          255 ---------TS--DGSILEKLNPYFESGKVKAIIDPKG  281 (284)
Q Consensus       255 ---------~~--~~~~~~~~~~~~~~g~i~~~i~~~~  281 (284)
                               ..  ..+.++++++++++|+++|.+.++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~  198 (198)
T 1pqw_A          161 VDLDLNLKLQPARYRQLLQHILQHVADGKLEVLPVTAF  198 (198)
T ss_dssp             CCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC--
T ss_pred             EehHHhhccCHHHHHHHHHHHHHHHHcCCccCCCCCcC
Confidence                     11  1467899999999999999877664

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.80  E-value=4.8e-11  Score=107.09  Aligned_cols=177  Identities=21%  Similarity=0.217  Sum_probs=123.4

Q ss_pred             cccccceeEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           62 TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        62 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      ...|+++++.|..+|++++++.+|++++.-.-..........|++++|...+...++.+|+.++.+.++. ..+..++|.
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~  153 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSA  153 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHH
Confidence            3478999999999999999999999862100000000001136677887777778888888877665544 334446777


Q ss_pred             HHHhcc----cCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhH-HHHHHcCCcEEeeCCCcccccCCCcc
Q 023273          142 GLERSA----FSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKL-DLLRSLGADLAIDYTKENIEDLPEKF  215 (284)
Q Consensus       142 al~~~~----~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~  215 (284)
                      ++....    -.+|++|+|+| +|++|.++++.++.. |+ +|+++++++++. +.++++|.+ +++..  ++.+...++
T Consensus       154 av~~a~~~~~~l~g~~VlIiG-aG~iG~~~a~~l~~~-G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~--~l~~~l~~a  228 (404)
T 1gpj_A          154 AVELAERELGSLHDKTVLVVG-AGEMGKTVAKSLVDR-GVRAVLVANRTYERAVELARDLGGE-AVRFD--ELVDHLARS  228 (404)
T ss_dssp             HHHHHHHHHSCCTTCEEEEES-CCHHHHHHHHHHHHH-CCSEEEEECSSHHHHHHHHHHHTCE-ECCGG--GHHHHHHTC
T ss_pred             HHHHHHHHhccccCCEEEEEC-hHHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHcCCc-eecHH--hHHHHhcCC
Confidence            774332    25899999999 699999999999986 87 899999998886 667788865 33332  233333579


Q ss_pred             cEEEeCCCCc-----HHHHHh--h--ccCCEEEEEcCC
Q 023273          216 DVVFDAVGQC-----DKALKA--V--KEGGRVVSIIGS  244 (284)
Q Consensus       216 d~vid~~g~~-----~~~~~~--l--~~~G~~v~~g~~  244 (284)
                      |+|++|++..     ...++.  +  +++|.+++++..
T Consensus       229 DvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia  266 (404)
T 1gpj_A          229 DVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA  266 (404)
T ss_dssp             SEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred             CEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence            9999999842     355665  4  567777777654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.48  E-value=1.9e-07  Score=82.43  Aligned_cols=92  Identities=22%  Similarity=0.288  Sum_probs=71.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE--EeeCCCcccccCCCcccEEEeCCCC----
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL--AIDYTKENIEDLPEKFDVVFDAVGQ----  224 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~d~vid~~g~----  224 (284)
                      +++|+|+|+ |++|+++++.++.+ |++|++++++++|.+.+++.+...  +++++..++.+...++|++|+|++.    
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~-Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~  244 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRR  244 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCC
Confidence            489999994 99999999999996 889999999999999888766432  3433333333333579999999863    


Q ss_pred             -----cHHHHHhhccCCEEEEEcCC
Q 023273          225 -----CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       225 -----~~~~~~~l~~~G~~v~~g~~  244 (284)
                           .+.+++.|+++|+++.++..
T Consensus       245 ~~~li~~~~~~~~~~g~~ivdv~~~  269 (361)
T 1pjc_A          245 APILVPASLVEQMRTGSVIVDVAVD  269 (361)
T ss_dssp             CCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred             CCeecCHHHHhhCCCCCEEEEEecC
Confidence                 25678999999999998754

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.42  E-value=1.3e-06  Score=79.62  Aligned_cols=100  Identities=23%  Similarity=0.286  Sum_probs=80.5

Q ss_pred             HHHHHHHHhcc--cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCc
Q 023273          137 ETAYEGLERSA--FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK  214 (284)
Q Consensus       137 ~ta~~al~~~~--~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  214 (284)
                      .++++++....  ..+|++|+|+| .|.+|..+++.++.+ |++|+++++++++.+.+++.|++ +.+     +.+..++
T Consensus       258 ~s~~~g~~r~~~~~l~GktV~IiG-~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~~Ga~-~~~-----l~e~l~~  329 (494)
T 3ce6_A          258 HSLIDGINRGTDALIGGKKVLICG-YGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMMEGFD-VVT-----VEEAIGD  329 (494)
T ss_dssp             HHHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCE-ECC-----HHHHGGG
T ss_pred             hhhhHHHHhccCCCCCcCEEEEEc-cCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCE-Eec-----HHHHHhC
Confidence            45666664433  78999999999 799999999999995 89999999999998888888875 322     1222468


Q ss_pred             ccEEEeCCCC---c-HHHHHhhccCCEEEEEcCC
Q 023273          215 FDVVFDAVGQ---C-DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       215 ~d~vid~~g~---~-~~~~~~l~~~G~~v~~g~~  244 (284)
                      +|+|++++|+   . ...++.|+++|+++.+|..
T Consensus       330 aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~  363 (494)
T 3ce6_A          330 ADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHF  363 (494)
T ss_dssp             CSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSS
T ss_pred             CCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCC
Confidence            9999999985   3 4889999999999998754

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.39  E-value=1.1e-05  Score=66.65  Aligned_cols=101  Identities=15%  Similarity=0.160  Sum_probs=72.2

Q ss_pred             HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CC-c--EEeeCCCcccccC
Q 023273          139 AYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA-D--LAIDYTKENIEDL  211 (284)
Q Consensus       139 a~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~-~--~~~~~~~~~~~~~  211 (284)
                      +.+.+...++.++++||.+| +| .|..+..+++.  +.+++.++.+++..+.+++.    +. .  .++..+.......
T Consensus        80 ~~~~~~~~~~~~~~~vldiG-~G-~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~  155 (248)
T 2yvl_A           80 SFYIALKLNLNKEKRVLEFG-TG-SGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVP  155 (248)
T ss_dssp             HHHHHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCC
T ss_pred             HHHHHHhcCCCCCCEEEEeC-CC-ccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccC
Confidence            33555677889999999999 66 69899998887  78999999999988887653    32 1  1222211111101


Q ss_pred             CCcccEEEeCCCC----cHHHHHhhccCCEEEEEcC
Q 023273          212 PEKFDVVFDAVGQ----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       212 ~~~~d~vid~~g~----~~~~~~~l~~~G~~v~~g~  243 (284)
                      .+.+|+|+.+.+.    ++.+.+.|+++|++++...
T Consensus       156 ~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          156 EGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             TTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             CCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            3579999988765    3778899999999997653

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.33  E-value=1.3e-06  Score=77.65  Aligned_cols=92  Identities=24%  Similarity=0.377  Sum_probs=72.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-----------------------
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-----------------------  205 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-----------------------  205 (284)
                      ++++|+|+| +|.+|++++++++.+ |++|+++++++++.+.++++|++.+ ++...                       
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~  248 (384)
T 1l7d_A          171 PPARVLVFG-VGVAGLQAIATAKRL-GAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  248 (384)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence            689999999 799999999999996 8999999999999999988987644 22211                       


Q ss_pred             cccccCCCcccEEEeCC---CC------cHHHHHhhccCCEEEEEcC
Q 023273          206 ENIEDLPEKFDVVFDAV---GQ------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       206 ~~~~~~~~~~d~vid~~---g~------~~~~~~~l~~~G~~v~~g~  243 (284)
                      ..+.+...++|+||+|+   |.      ...+++.|++++.++.++.
T Consensus       249 ~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~  295 (384)
T 1l7d_A          249 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV  295 (384)
T ss_dssp             HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred             HHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence            00223345799999998   52      1678899999999999974

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.26  E-value=2.2e-06  Score=76.00  Aligned_cols=93  Identities=22%  Similarity=0.274  Sum_probs=72.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcE-EeeCCCcccccCCCcccEEEeCCCC--
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADL-AIDYTKENIEDLPEKFDVVFDAVGQ--  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~d~vid~~g~--  224 (284)
                      -++++|+|+| +|.+|+++++.++.+ |++|+++++++++.+.+++ +|... +......++.+...++|++++|++.  
T Consensus       166 l~g~~V~ViG-~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~  243 (377)
T 2vhw_A          166 VEPADVVVIG-AGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPG  243 (377)
T ss_dssp             BCCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTT
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCC
Confidence            3689999999 599999999999995 8999999999999888876 67542 2222222333334579999999863  


Q ss_pred             -------cHHHHHhhccCCEEEEEcC
Q 023273          225 -------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       225 -------~~~~~~~l~~~G~~v~~g~  243 (284)
                             ...+++.|+++|.++.++.
T Consensus       244 ~~t~~li~~~~l~~mk~g~~iV~va~  269 (377)
T 2vhw_A          244 AKAPKLVSNSLVAHMKPGAVLVDIAI  269 (377)
T ss_dssp             SCCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred             CCCcceecHHHHhcCCCCcEEEEEec
Confidence                   3678899999999999974

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.26  E-value=2.1e-06  Score=76.68  Aligned_cols=93  Identities=20%  Similarity=0.382  Sum_probs=71.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe-eCC-------------Cc--------c
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYT-------------KE--------N  207 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~-------------~~--------~  207 (284)
                      ++++|+|+| +|.+|+.++++++.+ |++|+++++++++.+.++++|++.+. +..             ..        .
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  248 (401)
T 1x13_A          171 PPAKVMVIG-AGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL  248 (401)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence            588999999 799999999999996 89999999999999989989876431 210             00        1


Q ss_pred             cccCCCcccEEEeCC---C--C---c-HHHHHhhccCCEEEEEcCC
Q 023273          208 IEDLPEKFDVVFDAV---G--Q---C-DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       208 ~~~~~~~~d~vid~~---g--~---~-~~~~~~l~~~G~~v~~g~~  244 (284)
                      +.+...++|+||+++   |  .   . ..+++.|+++|.++.++.+
T Consensus       249 l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~  294 (401)
T 1x13_A          249 FAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQ  294 (401)
T ss_dssp             HHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred             HHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCC
Confidence            223335799999995   3  1   1 6789999999999999753

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.23  E-value=2.8e-06  Score=75.12  Aligned_cols=93  Identities=28%  Similarity=0.388  Sum_probs=70.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeC-CCcccccCCCcccEEEeCCCC---
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDY-TKENIEDLPEKFDVVFDAVGQ---  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~-~~~~~~~~~~~~d~vid~~g~---  224 (284)
                      ++++|+|+|+ |++|+.+++.++.+ |++|+++++++++.+.+++ ++.....+. +..++.+..+++|++++|++.   
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~-Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~  242 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGM-GAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGA  242 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcc
Confidence            4689999995 99999999999995 9999999999999888765 666532222 222333334579999999873   


Q ss_pred             ------cHHHHHhhccCCEEEEEcCC
Q 023273          225 ------CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       225 ------~~~~~~~l~~~G~~v~~g~~  244 (284)
                            .+.+++.|+++|+++.++..
T Consensus       243 ~~~~li~~~~l~~mk~gg~iV~v~~~  268 (369)
T 2eez_A          243 KAPKLVTRDMLSLMKEGAVIVDVAVD  268 (369)
T ss_dssp             ---CCSCHHHHTTSCTTCEEEECC--
T ss_pred             ccchhHHHHHHHhhcCCCEEEEEecC
Confidence                  25788999999999998654

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.08  E-value=2.1e-05  Score=66.85  Aligned_cols=95  Identities=20%  Similarity=0.238  Sum_probs=71.1

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CCc--EEeeCCCcccccCCCcccEE
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD--LAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~~--~~~~~~~~~~~~~~~~~d~v  218 (284)
                      .++++++++||.+| +|+.++.++.+|+. .+++|+.++.+++..+.+++.    |.+  .++.-+...++  .+.||+|
T Consensus       117 la~l~~g~rVLDIG-cG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV  192 (298)
T 3fpf_A          117 LGRFRRGERAVFIG-GGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVL  192 (298)
T ss_dssp             HTTCCTTCEEEEEC-CCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEE
T ss_pred             HcCCCCcCEEEEEC-CCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEE
Confidence            46889999999999 88877888888887 499999999999998888653    432  22222222232  4679999


Q ss_pred             EeCCCC------cHHHHHhhccCCEEEEEcC
Q 023273          219 FDAVGQ------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       219 id~~g~------~~~~~~~l~~~G~~v~~g~  243 (284)
                      +.+...      ++.+.+.|+++|+++....
T Consensus       193 ~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          193 MVAALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             EECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             EECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence            876542      3788899999999998753

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.03  E-value=8.1e-06  Score=71.79  Aligned_cols=92  Identities=29%  Similarity=0.412  Sum_probs=71.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe-e--------CC-----------Ccccc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-D--------YT-----------KENIE  209 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~--------~~-----------~~~~~  209 (284)
                      ++.+|+|+| .|.+|+.+++.++.+ |++|+++++++++++.++++|.+.+. +        +.           ...+.
T Consensus       183 ~~~kV~ViG-~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLG-VGVAGLQALATAKRL-GAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEES-CSHHHHHHHHHHHHH-TCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            678999999 799999999999996 99999999999999999998875321 0        00           01122


Q ss_pred             cCCCcccEEEeCCCC---------cHHHHHhhccCCEEEEEcC
Q 023273          210 DLPEKFDVVFDAVGQ---------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       210 ~~~~~~d~vid~~g~---------~~~~~~~l~~~G~~v~~g~  243 (284)
                      +..++.|+||.++..         .+.+++.|++++.+|.++.
T Consensus       261 e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~  303 (381)
T 3p2y_A          261 DAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAG  303 (381)
T ss_dssp             HHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred             HHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeC
Confidence            234689999998631         2789999999999999853

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.03  E-value=2.9e-06  Score=64.51  Aligned_cols=123  Identities=10%  Similarity=0.057  Sum_probs=82.1

Q ss_pred             HHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH-HHHcCCcEEeeCCCcccccCCCccc
Q 023273          138 TAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL-LRSLGADLAIDYTKENIEDLPEKFD  216 (284)
Q Consensus       138 ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~d  216 (284)
                      .++.+++......+++|+|+| +|.+|.+.++.++.. |.+++++++++++.+. +++++.. ....+  ++.+..+++|
T Consensus         8 v~~~a~~~~~~~~~~~v~iiG-~G~iG~~~a~~l~~~-g~~v~v~~r~~~~~~~~a~~~~~~-~~~~~--~~~~~~~~~D   82 (144)
T 3oj0_A            8 IPSIVYDIVRKNGGNKILLVG-NGMLASEIAPYFSYP-QYKVTVAGRNIDHVRAFAEKYEYE-YVLIN--DIDSLIKNND   82 (144)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEC-CSHHHHHHGGGCCTT-TCEEEEEESCHHHHHHHHHHHTCE-EEECS--CHHHHHHTCS
T ss_pred             HHHHHHHHHHhccCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEcCCHHHHHHHHHHhCCc-eEeec--CHHHHhcCCC
Confidence            467777665555699999999 799999999988874 8888899999888765 4566643 22221  2222235799


Q ss_pred             EEEeCCCCc--HHHHHhhccCCEEEEEcCCCCCC-ceeEEEeccHHHHHHHHHHH
Q 023273          217 VVFDAVGQC--DKALKAVKEGGRVVSIIGSVTPP-ASSFVLTSDGSILEKLNPYF  268 (284)
Q Consensus       217 ~vid~~g~~--~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~  268 (284)
                      +|+++++..  ....+.+++++.++.++.+.... ...   ....++++++++.-
T Consensus        83 ivi~at~~~~~~~~~~~l~~g~~vid~~~p~~~~~~~~---~~~~d~l~~~~~~~  134 (144)
T 3oj0_A           83 VIITATSSKTPIVEERSLMPGKLFIDLGNPPNIERGNN---VITLDEIYEISKKN  134 (144)
T ss_dssp             EEEECSCCSSCSBCGGGCCTTCEEEECCSSCSBCCSTT---SEEHHHHHHHHHHH
T ss_pred             EEEEeCCCCCcEeeHHHcCCCCEEEEccCCccCCCCCE---EEeHHHHHHHHHHH
Confidence            999999853  22337788999999888764211 111   11345666665543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.97  E-value=1.6e-05  Score=70.49  Aligned_cols=92  Identities=28%  Similarity=0.363  Sum_probs=71.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEee-------------CCC-----------
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID-------------YTK-----------  205 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~-------------~~~-----------  205 (284)
                      ++.+|+|+| +|.+|+.++++++.+ |++|+++++++++++.++++|.+.+..             +..           
T Consensus       189 ~~~kV~ViG-~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~  266 (405)
T 4dio_A          189 PAAKIFVMG-AGVAGLQAIATARRL-GAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA  266 (405)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence            678999999 799999999999996 999999999999999999988753211             000           


Q ss_pred             cccccCCCcccEEEeCCCC---------cHHHHHhhccCCEEEEEcC
Q 023273          206 ENIEDLPEKFDVVFDAVGQ---------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       206 ~~~~~~~~~~d~vid~~g~---------~~~~~~~l~~~G~~v~~g~  243 (284)
                      ..+.+...+.|+||.|+..         .+.+++.|++++.+|.++.
T Consensus       267 ~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~  313 (405)
T 4dio_A          267 ALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV  313 (405)
T ss_dssp             HHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred             hHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence            0112223579999998631         2789999999999999853

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.83  E-value=0.00014  Score=61.26  Aligned_cols=98  Identities=23%  Similarity=0.204  Sum_probs=68.0

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHc----CC-c--EEeeCCCcccccCCC
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL----GA-D--LAIDYTKENIEDLPE  213 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~----g~-~--~~~~~~~~~~~~~~~  213 (284)
                      .+....+.++++||.+| +|. |..+..+++.++ +.+++.++.+++..+.+++.    +. .  .++..+.... -..+
T Consensus       104 i~~~~~~~~~~~VLDiG-~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~  180 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTG-VGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEK  180 (277)
T ss_dssp             HHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCC
T ss_pred             HHHHhCCCCCCEEEEEC-CcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCC
Confidence            34567889999999999 555 888888888742 57999999999988877643    42 1  1222111111 1124


Q ss_pred             cccEEEeCCCC----cHHHHHhhccCCEEEEEc
Q 023273          214 KFDVVFDAVGQ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       214 ~~d~vid~~g~----~~~~~~~l~~~G~~v~~g  242 (284)
                      .+|+|+.....    +..+.+.|+++|++++..
T Consensus       181 ~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          181 DVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             SEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             ccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            69999876654    367888999999998765

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.73  E-value=0.00018  Score=61.28  Aligned_cols=91  Identities=18%  Similarity=0.265  Sum_probs=71.9

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---  224 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---  224 (284)
                      --.|++|+|+| .|.+|.++++.++.. |.+|++.+++.++.+.++++|.. .++.  .++.+.....|+|+.++..   
T Consensus       152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~-~~~~--~~l~~~l~~aDvVi~~~p~~~i  226 (293)
T 3d4o_A          152 TIHGANVAVLG-LGRVGMSVARKFAAL-GAKVKVGARESDLLARIAEMGME-PFHI--SKAAQELRDVDVCINTIPALVV  226 (293)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTSE-EEEG--GGHHHHTTTCSEEEECCSSCCB
T ss_pred             CCCCCEEEEEe-eCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHCCCe-ecCh--hhHHHHhcCCCEEEECCChHHh
Confidence            35789999999 899999999999985 89999999998887777777764 2222  2233445689999999863   


Q ss_pred             cHHHHHhhccCCEEEEEcC
Q 023273          225 CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       225 ~~~~~~~l~~~G~~v~~g~  243 (284)
                      ....++.|++++.++.++.
T Consensus       227 ~~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          227 TANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             CHHHHHHSCTTCEEEECSS
T ss_pred             CHHHHHhcCCCCEEEEecC
Confidence            2667889999999998874

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.72  E-value=0.00016  Score=52.25  Aligned_cols=90  Identities=24%  Similarity=0.295  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHHcCCcEE-eeCCC-cccccCCCcccEEEeCCCCc-
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVGQC-  225 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~d~vid~~g~~-  225 (284)
                      .+.+|+|+|+ |.+|...++.+... | .+++++++++++.+.++..+...+ .+..+ +.+.+.-+++|++|++++.. 
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~   81 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTS-SNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL   81 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHC-SSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh
Confidence            4578999997 99999999998885 7 899999999999888876554322 22222 22333346899999999842 


Q ss_pred             --HHHHHhhccCCEEEEE
Q 023273          226 --DKALKAVKEGGRVVSI  241 (284)
Q Consensus       226 --~~~~~~l~~~G~~v~~  241 (284)
                        ..+..+...+-+++.+
T Consensus        82 ~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           82 TPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             HHHHHHHHHHTTCEEECC
T ss_pred             hHHHHHHHHHhCCCEEEe
Confidence              3333445555555433

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.71  E-value=0.00019  Score=63.86  Aligned_cols=91  Identities=19%  Similarity=0.210  Sum_probs=73.1

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC--
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--  224 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~--  224 (284)
                      ..-.|++|+|+| .|.+|..+++.++.. |++|+++++++.+...+...|.. +.     ++.+.....|+++.|.|+  
T Consensus       216 ~~L~GktV~ViG-~G~IGk~vA~~Lra~-Ga~Viv~D~dp~ra~~A~~~G~~-v~-----~Leeal~~ADIVi~atgt~~  287 (435)
T 3gvp_A          216 MMFGGKQVVVCG-YGEVGKGCCAALKAM-GSIVYVTEIDPICALQACMDGFR-LV-----KLNEVIRQVDIVITCTGNKN  287 (435)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCE-EC-----CHHHHTTTCSEEEECSSCSC
T ss_pred             ceecCCEEEEEe-eCHHHHHHHHHHHHC-CCEEEEEeCChhhhHHHHHcCCE-ec-----cHHHHHhcCCEEEECCCCcc
Confidence            356899999999 899999999999995 99999999998877777666643 11     234445689999999884  


Q ss_pred             -c-HHHHHhhccCCEEEEEcCCC
Q 023273          225 -C-DKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       225 -~-~~~~~~l~~~G~~v~~g~~~  245 (284)
                       . ...++.|++++.++.+|...
T Consensus       288 lI~~e~l~~MK~gailINvgrg~  310 (435)
T 3gvp_A          288 VVTREHLDRMKNSCIVCNMGHSN  310 (435)
T ss_dssp             SBCHHHHHHSCTTEEEEECSSTT
T ss_pred             cCCHHHHHhcCCCcEEEEecCCC
Confidence             2 58999999999999887653

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.68  E-value=0.00026  Score=57.96  Aligned_cols=95  Identities=23%  Similarity=0.291  Sum_probs=67.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-cEE-eeCCCcccccCCCcccEEEeCCCCc-
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLA-IDYTKENIEDLPEKFDVVFDAVGQC-  225 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~-~~~~~~~~~~~~~~~d~vid~~g~~-  225 (284)
                      -.+++|+|+||+|.+|...++.+... |.+|+++++++++.+.+.+.+. ..+ .|.. +.+.+.-+++|++|+++|.. 
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~D~vi~~ag~~~   96 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNK-GHEPVAMVRNEEQGPELRERGASDIVVANLE-EDFSHAFASIDAVVFAAGSGP   96 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHTTCSEEEECCTT-SCCGGGGTTCSEEEECCCCCT
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhC-CCeEEEEECChHHHHHHHhCCCceEEEcccH-HHHHHHHcCCCEEEECCCCCC
Confidence            35789999999999999999988884 9999999999998887776665 322 1323 33444456899999998831 


Q ss_pred             ---------------HHHHHhhcc--CCEEEEEcCCC
Q 023273          226 ---------------DKALKAVKE--GGRVVSIIGSV  245 (284)
Q Consensus       226 ---------------~~~~~~l~~--~G~~v~~g~~~  245 (284)
                                     ..+++.++.  .+++|.++...
T Consensus        97 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           97 HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence                           123343332  47999887654

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.65  E-value=0.00019  Score=60.48  Aligned_cols=94  Identities=23%  Similarity=0.333  Sum_probs=67.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCc-EEe--eCCC-cccccC-------CCccc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAI--DYTK-ENIEDL-------PEKFD  216 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~--~~~~-~~~~~~-------~~~~d  216 (284)
                      -.|+++||+|+++++|++.++..... |++|+++++++++++.+ ++++.. ..+  |-.+ +.....       -+++|
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~-Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD  105 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAE-GARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID  105 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999988888874 99999999999887665 566643 222  2111 111111       35799


Q ss_pred             EEEeCCCC----c------------------------HHHHHhhccCCEEEEEcC
Q 023273          217 VVFDAVGQ----C------------------------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       217 ~vid~~g~----~------------------------~~~~~~l~~~G~~v~~g~  243 (284)
                      ++++++|.    +                        +.++..|+++|++|.++.
T Consensus       106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS  160 (273)
T 4fgs_A          106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS  160 (273)
T ss_dssp             EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred             EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee
Confidence            99999872    0                        256778888999998854

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.63  E-value=0.00098  Score=53.18  Aligned_cols=99  Identities=17%  Similarity=0.136  Sum_probs=68.8

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCcccccCCCcc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKF  215 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~  215 (284)
                      .+....++++++||.+| +| .|..++.+++.....+++.++.+++..+.+++    .+..  .++..+........+.+
T Consensus        32 ~l~~l~~~~~~~vLDiG-~G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~  109 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIG-AG-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDP  109 (204)
T ss_dssp             HHHHTTCCTTCEEEEET-CT-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCC
T ss_pred             HHHHcCCCCCCEEEEEC-CC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCC
Confidence            34566888999999999 55 48888888887324899999999998887764    2322  22332221111112569


Q ss_pred             cEEEeCCC--C----cHHHHHhhccCCEEEEEc
Q 023273          216 DVVFDAVG--Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       216 d~vid~~g--~----~~~~~~~l~~~G~~v~~g  242 (284)
                      |+|+....  .    .+.+.+.|+++|++++..
T Consensus       110 D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  142 (204)
T 3e05_A          110 DRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNA  142 (204)
T ss_dssp             SEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             CEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence            99988754  2    378889999999999754

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.63  E-value=0.00073  Score=51.64  Aligned_cols=76  Identities=24%  Similarity=0.369  Sum_probs=55.6

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEe-eCCC-cccccC-CCcccEEEeCCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAI-DYTK-ENIEDL-PEKFDVVFDAVG  223 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~-~~~~-~~~~~~-~~~~d~vid~~g  223 (284)
                      ..++++|+|+| +|.+|...++.++.. |.+|+++++++++.+.++ +.+...+. +... +.+... ..++|++|.+++
T Consensus        16 ~~~~~~v~IiG-~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           16 KQKSKYIVIFG-CGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN   93 (155)
T ss_dssp             -CCCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred             ccCCCcEEEEC-CCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence            45788999999 799999999999885 899999999999888776 56654332 1111 112222 357999999999


Q ss_pred             Cc
Q 023273          224 QC  225 (284)
Q Consensus       224 ~~  225 (284)
                      +.
T Consensus        94 ~~   95 (155)
T 2g1u_A           94 DD   95 (155)
T ss_dssp             CH
T ss_pred             Cc
Confidence            63

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.62  E-value=0.00049  Score=53.46  Aligned_cols=98  Identities=23%  Similarity=0.364  Sum_probs=69.4

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-E-EeeCCC-cccccCCCcc
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-L-AIDYTK-ENIEDLPEKF  215 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~-~~~~~~-~~~~~~~~~~  215 (284)
                      +....+.++++||.+| +|. |..+..+++...+.+++.++.+++..+.+++    .+.. . .+..+. +.++...+.+
T Consensus        18 ~~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   95 (178)
T 3hm2_A           18 ISALAPKPHETLWDIG-GGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNP   95 (178)
T ss_dssp             HHHHCCCTTEEEEEES-TTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCC
T ss_pred             HHHhcccCCCeEEEeC-CCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCC
Confidence            3456778999999999 554 8888898887446899999999998887764    3432 2 222221 2333333689


Q ss_pred             cEEEeCCC--C---cHHHHHhhccCCEEEEEc
Q 023273          216 DVVFDAVG--Q---CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       216 d~vid~~g--~---~~~~~~~l~~~G~~v~~g  242 (284)
                      |+|+....  .   .+.+.+.|+++|++++..
T Consensus        96 D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  127 (178)
T 3hm2_A           96 DVIFIGGGLTAPGVFAAAWKRLPVGGRLVANA  127 (178)
T ss_dssp             SEEEECC-TTCTTHHHHHHHTCCTTCEEEEEE
T ss_pred             CEEEECCcccHHHHHHHHHHhcCCCCEEEEEe
Confidence            99997653  2   478889999999998755

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.61  E-value=0.00031  Score=60.08  Aligned_cols=91  Identities=15%  Similarity=0.309  Sum_probs=71.8

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---  224 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---  224 (284)
                      --.+++|+|+| .|.+|..+++.++.. |.+|++.+++.++.+.+.++|.. .++.  .++.+...+.|+|+.++..   
T Consensus       154 ~l~g~~v~IiG-~G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~-~~~~--~~l~~~l~~aDvVi~~~p~~~i  228 (300)
T 2rir_A          154 TIHGSQVAVLG-LGRTGMTIARTFAAL-GANVKVGARSSAHLARITEMGLV-PFHT--DELKEHVKDIDICINTIPSMIL  228 (300)
T ss_dssp             CSTTSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCE-EEEG--GGHHHHSTTCSEEEECCSSCCB
T ss_pred             CCCCCEEEEEc-ccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCCe-EEch--hhHHHHhhCCCEEEECCChhhh
Confidence            45789999999 799999999999985 99999999998887777777753 3322  2234445789999999874   


Q ss_pred             cHHHHHhhccCCEEEEEcC
Q 023273          225 CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       225 ~~~~~~~l~~~G~~v~~g~  243 (284)
                      ....++.|++++.++.++.
T Consensus       229 ~~~~~~~mk~g~~lin~a~  247 (300)
T 2rir_A          229 NQTVLSSMTPKTLILDLAS  247 (300)
T ss_dssp             CHHHHTTSCTTCEEEECSS
T ss_pred             CHHHHHhCCCCCEEEEEeC
Confidence            2567889999999998874

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.60  E-value=0.00033  Score=63.41  Aligned_cols=88  Identities=23%  Similarity=0.247  Sum_probs=70.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---c
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---C  225 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---~  225 (284)
                      -.|++++|+| .|++|.++++.++.. |++|+++++++++...+...+.+ +.     +.......+|+++++.|.   .
T Consensus       263 L~GKtVvVtG-aGgIG~aiA~~Laa~-GA~Viv~D~~~~~a~~Aa~~g~d-v~-----~lee~~~~aDvVi~atG~~~vl  334 (488)
T 3ond_A          263 IAGKVAVVAG-YGDVGKGCAAALKQA-GARVIVTEIDPICALQATMEGLQ-VL-----TLEDVVSEADIFVTTTGNKDII  334 (488)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCE-EC-----CGGGTTTTCSEEEECSSCSCSB
T ss_pred             ccCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHhCCc-cC-----CHHHHHHhcCEEEeCCCChhhh
Confidence            5799999999 679999999999995 99999999998888777776643 21     123445679999999985   2


Q ss_pred             -HHHHHhhccCCEEEEEcCC
Q 023273          226 -DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       226 -~~~~~~l~~~G~~v~~g~~  244 (284)
                       ...++.|++++.++.+|..
T Consensus       335 ~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          335 MLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             CHHHHTTSCTTEEEEESSST
T ss_pred             hHHHHHhcCCCeEEEEcCCC
Confidence             5588999999999888764

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.56  E-value=0.0015  Score=52.33  Aligned_cols=97  Identities=18%  Similarity=0.247  Sum_probs=68.5

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc---EEeeCCCcccccCCCc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEK  214 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~  214 (284)
                      .+....+.++++||-+| +|. |..++.+++.  +.+++.++.+++..+.+++    .+..   .++..+..........
T Consensus        47 ~l~~l~~~~~~~vLDlG-cG~-G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~  122 (204)
T 3njr_A           47 TLAALAPRRGELLWDIG-GGS-GSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPL  122 (204)
T ss_dssp             HHHHHCCCTTCEEEEET-CTT-CHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCC
T ss_pred             HHHhcCCCCCCEEEEec-CCC-CHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCC
Confidence            34566788999999999 554 8888888886  7899999999998887754    3432   2333332221112347


Q ss_pred             ccEEEeCCC-C---cHHHHHhhccCCEEEEEc
Q 023273          215 FDVVFDAVG-Q---CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       215 ~d~vid~~g-~---~~~~~~~l~~~G~~v~~g  242 (284)
                      +|+|+...+ .   .+.+.+.|+++|++++..
T Consensus       123 ~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~  154 (204)
T 3njr_A          123 PEAVFIGGGGSQALYDRLWEWLAPGTRIVANA  154 (204)
T ss_dssp             CSEEEECSCCCHHHHHHHHHHSCTTCEEEEEE
T ss_pred             CCEEEECCcccHHHHHHHHHhcCCCcEEEEEe
Confidence            999987654 2   367788999999998754

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.53  E-value=0.0004  Score=55.94  Aligned_cols=89  Identities=20%  Similarity=0.286  Sum_probs=62.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe--eCCCcccccCCCcccEEEeCCCCc----
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTKENIEDLPEKFDVVFDAVGQC----  225 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~d~vid~~g~~----  225 (284)
                      .+|+|+||+|.+|...++.+... |.+|+++++++++.+.+. .+. .++  |..+... +.-+++|+||+++|..    
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~-~~~-~~~~~D~~d~~~-~~~~~~d~vi~~ag~~~~~~   76 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNR-GHEVTAIVRNAGKITQTH-KDI-NILQKDIFDLTL-SDLSDQNVVVDAYGISPDEA   76 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCSHHHHHHC-SSS-EEEECCGGGCCH-HHHTTCSEEEECCCSSTTTT
T ss_pred             CeEEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCchhhhhcc-CCC-eEEeccccChhh-hhhcCCCEEEECCcCCcccc
Confidence            36999999999999999998884 899999999988776553 222 222  2211111 2236899999998841    


Q ss_pred             -------HHHHHhhccC--CEEEEEcCC
Q 023273          226 -------DKALKAVKEG--GRVVSIIGS  244 (284)
Q Consensus       226 -------~~~~~~l~~~--G~~v~~g~~  244 (284)
                             ..+++.++..  ++++.++..
T Consensus        77 ~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           77 EKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             TSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             chHHHHHHHHHHHHHhcCCceEEEEecc
Confidence                   4566666654  789888643

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.47  E-value=0.00083  Score=54.03  Aligned_cols=101  Identities=18%  Similarity=0.255  Sum_probs=70.1

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC--CeEEEEeCChhhHHHHHHc----CCc--EEeeCCCcccccCCC
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSL----GAD--LAIDYTKENIEDLPE  213 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~~~~~~~~~~~~----g~~--~~~~~~~~~~~~~~~  213 (284)
                      .+......++++||.+| +| .|..+..+++.. +  .+++.++.+++..+.+++.    +..  .++..+........+
T Consensus        69 ~~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~  145 (215)
T 2yxe_A           69 MCELLDLKPGMKVLEIG-TG-CGYHAAVTAEIV-GEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLA  145 (215)
T ss_dssp             HHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHHH-CTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGC
T ss_pred             HHHhhCCCCCCEEEEEC-CC-ccHHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCC
Confidence            34556788999999999 55 588888999884 5  7999999999988777642    322  222222111111135


Q ss_pred             cccEEEeCCC--C-cHHHHHhhccCCEEEEEcCCC
Q 023273          214 KFDVVFDAVG--Q-CDKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       214 ~~d~vid~~g--~-~~~~~~~l~~~G~~v~~g~~~  245 (284)
                      .+|+|+.+..  . .+.+.++|+++|++++.-...
T Consensus       146 ~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~~~  180 (215)
T 2yxe_A          146 PYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVGRY  180 (215)
T ss_dssp             CEEEEEESSBBSSCCHHHHHTEEEEEEEEEEESSS
T ss_pred             CeeEEEECCchHHHHHHHHHHcCCCcEEEEEECCC
Confidence            7999998754  2 478899999999998875443

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.45  E-value=0.00047  Score=61.58  Aligned_cols=91  Identities=21%  Similarity=0.169  Sum_probs=72.0

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC--
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--  224 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~--  224 (284)
                      ..-.|++|+|+| .|.+|..+++.++.+ |++|+++++++.+...+...|.. +.+     +.+.....|+|+.++|+  
T Consensus       243 ~~L~GKTVgVIG-~G~IGr~vA~~lraf-Ga~Viv~d~dp~~a~~A~~~G~~-vv~-----LeElL~~ADIVv~atgt~~  314 (464)
T 3n58_A          243 VMMAGKVAVVCG-YGDVGKGSAQSLAGA-GARVKVTEVDPICALQAAMDGFE-VVT-----LDDAASTADIVVTTTGNKD  314 (464)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHTTCE-ECC-----HHHHGGGCSEEEECCSSSS
T ss_pred             CcccCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEEeCCcchhhHHHhcCce-ecc-----HHHHHhhCCEEEECCCCcc
Confidence            356899999999 899999999999995 99999999988776666666653 221     23334679999999885  


Q ss_pred             -c-HHHHHhhccCCEEEEEcCCC
Q 023273          225 -C-DKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       225 -~-~~~~~~l~~~G~~v~~g~~~  245 (284)
                       . ...+..|++++.++.+|-..
T Consensus       315 lI~~e~l~~MK~GAILINvGRgd  337 (464)
T 3n58_A          315 VITIDHMRKMKDMCIVGNIGHFD  337 (464)
T ss_dssp             SBCHHHHHHSCTTEEEEECSSST
T ss_pred             ccCHHHHhcCCCCeEEEEcCCCC
Confidence             2 78899999999999887543

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.42  E-value=0.00051  Score=57.36  Aligned_cols=92  Identities=13%  Similarity=0.178  Sum_probs=68.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc-EEeeCCCcccccCCCcccEEEeCCC--Cc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPEKFDVVFDAVG--QC  225 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~d~vid~~g--~~  225 (284)
                      .++.+||.+| +|. |..+..+++...+.+++.++.+++..+.+++.+.. .++..+...++...+.+|+|+....  .+
T Consensus        84 ~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~l  161 (269)
T 1p91_A           84 DKATAVLDIG-CGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCKA  161 (269)
T ss_dssp             TTCCEEEEET-CTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCCCCH
T ss_pred             CCCCEEEEEC-CCC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCChhhH
Confidence            6889999999 676 88888898874368999999999999998876533 2333322222222457999996543  35


Q ss_pred             HHHHHhhccCCEEEEEc
Q 023273          226 DKALKAVKEGGRVVSII  242 (284)
Q Consensus       226 ~~~~~~l~~~G~~v~~g  242 (284)
                      ..+.+.|+++|++++..
T Consensus       162 ~~~~~~L~pgG~l~~~~  178 (269)
T 1p91_A          162 EELARVVKPGGWVITAT  178 (269)
T ss_dssp             HHHHHHEEEEEEEEEEE
T ss_pred             HHHHHhcCCCcEEEEEE
Confidence            88999999999999874

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=97.41  E-value=0.00092  Score=57.32  Aligned_cols=96  Identities=16%  Similarity=0.271  Sum_probs=67.5

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CCcEEeeCCCcccccCCCcccEEE
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GADLAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      +..++.++++||.+| +|. |..+..+++.. +++++.++.+++..+.+++.    +...-+.....+..+..+.+|+|+
T Consensus        84 ~~~~~~~~~~vLDiG-cG~-G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~  160 (318)
T 2fk8_A           84 DKLDLKPGMTLLDIG-CGW-GTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIV  160 (318)
T ss_dssp             TTSCCCTTCEEEEES-CTT-SHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEE
T ss_pred             HhcCCCCcCEEEEEc-ccc-hHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEE
Confidence            456788999999999 555 88888999885 88999999999988887653    321111111112223346799998


Q ss_pred             eC-----CC--C----cHHHHHhhccCCEEEEEc
Q 023273          220 DA-----VG--Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       220 d~-----~g--~----~~~~~~~l~~~G~~v~~g  242 (284)
                      ..     .+  .    +..+.+.|+++|++++..
T Consensus       161 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  194 (318)
T 2fk8_A          161 SIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  194 (318)
T ss_dssp             EESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             EeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            75     32  1    256788999999999764

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.40  E-value=0.0013  Score=52.70  Aligned_cols=99  Identities=16%  Similarity=0.112  Sum_probs=69.5

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCcccccCCCcc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKF  215 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~  215 (284)
                      .+....++++++||.+| +| .|..+..+++.  +.+++.++.+++..+.+++    .+..  .++..+........+.+
T Consensus        69 ~~~~l~~~~~~~vLdiG-~G-~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~  144 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIG-TG-SGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPF  144 (210)
T ss_dssp             HHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred             HHHhcCCCCCCEEEEEc-CC-CCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCc
Confidence            34566788999999999 55 58888888886  7899999999998887764    2322  22222211111124579


Q ss_pred             cEEEeCCC--C-cHHHHHhhccCCEEEEEcCC
Q 023273          216 DVVFDAVG--Q-CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       216 d~vid~~g--~-~~~~~~~l~~~G~~v~~g~~  244 (284)
                      |+|+.+..  . ++.+.+.|+++|++++.-..
T Consensus       145 D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~~  176 (210)
T 3lbf_A          145 DAIIVTAAPPEIPTALMTQLDEGGILVLPVGE  176 (210)
T ss_dssp             EEEEESSBCSSCCTHHHHTEEEEEEEEEEECS
T ss_pred             cEEEEccchhhhhHHHHHhcccCcEEEEEEcC
Confidence            99998654  2 47889999999999876544

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.38  E-value=0.00051  Score=54.90  Aligned_cols=127  Identities=17%  Similarity=0.186  Sum_probs=76.1

Q ss_pred             ceeeEEe-eecCceeeCCCCCCHHhhhcccchHHHHHHHHHh--cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEE
Q 023273          105 SLAEYTA-VEENLLALKPKNLSFVEAASLPLATETAYEGLER--SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVA  181 (284)
Q Consensus       105 ~~~~~~~-~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~--~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~  181 (284)
                      .|.+|.. .+....+.+++++.+.....     .+....++.  ..+.++++||-+| +|. |..+..+++. +..+++.
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~-----~~~~~~~~~l~~~~~~~~~vLDiG-~G~-G~~~~~l~~~-~~~~v~~   88 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNH-----QTTQLAMLGIERAMVKPLTVADVG-TGS-GILAIAAHKL-GAKSVLA   88 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCH-----HHHHHHHHHHHHHCSSCCEEEEET-CTT-SHHHHHHHHT-TCSEEEE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCC-----ccHHHHHHHHHHhccCCCEEEEEC-CCC-CHHHHHHHHC-CCCEEEE
Confidence            3455555 45566677777765433211     111112221  2257889999999 554 7777777775 4569999


Q ss_pred             EeCChhhHHHHHH----cCCc--EEeeCCCcccccCCCcccEEEeCCCC------cHHHHHhhccCCEEEEE
Q 023273          182 ATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFDVVFDAVGQ------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       182 ~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~d~vid~~g~------~~~~~~~l~~~G~~v~~  241 (284)
                      ++.+++..+.+++    .+..  .++..+..  ....+.+|+|+....-      ...+.+.|+++|++++.
T Consensus        89 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~--~~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~  158 (205)
T 3grz_A           89 TDISDESMTAAEENAALNGIYDIALQKTSLL--ADVDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFS  158 (205)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCCCEEEESSTT--TTCCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEE
T ss_pred             EECCHHHHHHHHHHHHHcCCCceEEEecccc--ccCCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            9999998877764    2322  23322221  1224689999876541      36777899999999874

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.38  E-value=0.0019  Score=50.73  Aligned_cols=90  Identities=20%  Similarity=0.268  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHcCCcEEe-eCCC-cccccC--CCcccEEEeCCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSLGADLAI-DYTK-ENIEDL--PEKFDVVFDAVGQ  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~-~~~~~~--~~~~d~vid~~g~  224 (284)
                      .+++|+|+| .|.+|..+++.++. . |.+|+++++++++.+.+++.|...+. |..+ +.+.+.  .+++|++|.++++
T Consensus        38 ~~~~v~IiG-~G~~G~~~a~~L~~-~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~  115 (183)
T 3c85_A           38 GHAQVLILG-MGRIGTGAYDELRA-RYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH  115 (183)
T ss_dssp             TTCSEEEEC-CSHHHHHHHHHHHH-HHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHh-ccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence            367899999 89999999999887 5 88999999999999988888866443 3222 123333  4679999999986


Q ss_pred             c---HH---HHHhhccCCEEEEE
Q 023273          225 C---DK---ALKAVKEGGRVVSI  241 (284)
Q Consensus       225 ~---~~---~~~~l~~~G~~v~~  241 (284)
                      .   ..   .++.+.+..+++..
T Consensus       116 ~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          116 HQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             HHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             hHHHHHHHHHHHHHCCCCEEEEE
Confidence            3   22   33444445566654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.37  E-value=0.0007  Score=54.75  Aligned_cols=92  Identities=15%  Similarity=0.123  Sum_probs=62.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-HhcCCeEEEEeCChh-hHHHHHHcCC-cEEe--eCCC-cccccCCCcccEEEeCCCC-
Q 023273          152 KSILVLGGAGGVGTMVIQLAK-HVFGASKVAATSSTA-KLDLLRSLGA-DLAI--DYTK-ENIEDLPEKFDVVFDAVGQ-  224 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~-~~~g~~vi~~~~~~~-~~~~~~~~g~-~~~~--~~~~-~~~~~~~~~~d~vid~~g~-  224 (284)
                      ++|+|+||+|.+|...++.+. . .|.+|++++++++ +.+.+...+. ...+  |..+ +.+...-+++|++|+++|. 
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~   84 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTY-TDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES   84 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHH-CCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhc-CCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence            469999999999999888877 6 4999999999988 7665532222 2222  2211 2223334589999999985 


Q ss_pred             ---cHHHHHhhccC--CEEEEEcCC
Q 023273          225 ---CDKALKAVKEG--GRVVSIIGS  244 (284)
Q Consensus       225 ---~~~~~~~l~~~--G~~v~~g~~  244 (284)
                         ...+++.++..  |++|.++..
T Consensus        85 n~~~~~~~~~~~~~~~~~iv~iSs~  109 (221)
T 3r6d_A           85 GSDMASIVKALSRXNIRRVIGVSMA  109 (221)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred             ChhHHHHHHHHHhcCCCeEEEEeec
Confidence               24555555543  689888654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.36  E-value=0.00066  Score=56.46  Aligned_cols=94  Identities=20%  Similarity=0.341  Sum_probs=63.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEeeCCCcc---ccc-------CCCccc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAIDYTKEN---IED-------LPEKFD  216 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~~~~~~~---~~~-------~~~~~d  216 (284)
                      -.+++++|+|+++++|.+.++..... |++|+++++++++.+.+. +++.. ..+..+-.+   ...       ..+++|
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEG-GAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID   84 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            36789999999999999988888774 999999999988876664 44422 222211111   111       124799


Q ss_pred             EEEeCCCCc----------------------------HHHHHhhccCCEEEEEcC
Q 023273          217 VVFDAVGQC----------------------------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       217 ~vid~~g~~----------------------------~~~~~~l~~~G~~v~~g~  243 (284)
                      ++++++|..                            +.++..++++|++|.++.
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS  139 (255)
T 4eso_A           85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS  139 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence            999998720                            134455667899998854

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.28  E-value=0.0018  Score=54.56  Aligned_cols=93  Identities=23%  Similarity=0.378  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh-HHH----HHHcCCc-EEe--eCCC-cccccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDL----LRSLGAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~-~~~----~~~~g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      .++++||+|++|++|.+.++.+... |++|+++++++++ .+.    +++.+.. ..+  |-.+ +.+...       .+
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRR-GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999888874 9999999987643 222    2344432 222  2111 111111       24


Q ss_pred             cccEEEeCCCCc----------------------------HHHHHhhccCCEEEEEcC
Q 023273          214 KFDVVFDAVGQC----------------------------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       214 ~~d~vid~~g~~----------------------------~~~~~~l~~~G~~v~~g~  243 (284)
                      ++|++|+++|..                            +.++..|+..|++|.++.
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  164 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  164 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence            799999998721                            234555566799999864

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.27  E-value=0.0014  Score=53.61  Aligned_cols=99  Identities=19%  Similarity=0.308  Sum_probs=69.3

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcE--EeeCCC-cccccCCCc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL--AIDYTK-ENIEDLPEK  214 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~-~~~~~~~~~  214 (284)
                      .++...+.++++||.+| +| .|..++.+++.. +.+++.++.+++..+.+++    .+...  ++..+. ..+.. ...
T Consensus        83 ~~~~l~~~~~~~vLdiG-~G-~G~~~~~la~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~  158 (235)
T 1jg1_A           83 MLEIANLKPGMNILEVG-TG-SGWNAALISEIV-KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPP-KAP  158 (235)
T ss_dssp             HHHHHTCCTTCCEEEEC-CT-TSHHHHHHHHHH-CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-GCC
T ss_pred             HHHhcCCCCCCEEEEEe-CC-cCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCC-CCC
Confidence            34556788999999999 55 788999999984 5899999999988877754    33222  222211 11111 235


Q ss_pred             ccEEEeCCC--C-cHHHHHhhccCCEEEEEcCC
Q 023273          215 FDVVFDAVG--Q-CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       215 ~d~vid~~g--~-~~~~~~~l~~~G~~v~~g~~  244 (284)
                      +|+|+.+..  . +..+.+.|+++|++++.-..
T Consensus       159 fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~~  191 (235)
T 1jg1_A          159 YDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVGS  191 (235)
T ss_dssp             EEEEEECSBBSSCCHHHHHTEEEEEEEEEEECS
T ss_pred             ccEEEECCcHHHHHHHHHHhcCCCcEEEEEEec
Confidence            999997755  2 47889999999999876543

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.27  E-value=0.0025  Score=52.64  Aligned_cols=99  Identities=18%  Similarity=0.098  Sum_probs=69.2

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHc-----CCcE--EeeCCCcccccCCC
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL-----GADL--AIDYTKENIEDLPE  213 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~-----g~~~--~~~~~~~~~~~~~~  213 (284)
                      .+....+.++++||.+| +|. |..+..+++..+ +.+++.++.+++..+.+++.     |...  ++..+.....-..+
T Consensus        88 ~~~~~~~~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~  165 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAG-TGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEA  165 (258)
T ss_dssp             HHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTT
T ss_pred             HHHHcCCCCCCEEEEEC-CCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC
Confidence            44566789999999999 554 888888888743 57999999999988887653     5222  22222111111125


Q ss_pred             cccEEEeCCCC----cHHHHHhhccCCEEEEEc
Q 023273          214 KFDVVFDAVGQ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       214 ~~d~vid~~g~----~~~~~~~l~~~G~~v~~g  242 (284)
                      .+|+|+.....    +..+.+.|+++|+++++.
T Consensus       166 ~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          166 AYDGVALDLMEPWKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             CEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            69999876654    377888999999999765

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=97.26  E-value=0.0028  Score=52.42  Aligned_cols=98  Identities=14%  Similarity=0.183  Sum_probs=71.1

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc----EEeeCCCcccccCCCcccE
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD----LAIDYTKENIEDLPEKFDV  217 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~d~  217 (284)
                      .+....+.++.+||-+| +| .|..+..+++.. +.+++.++.+++..+.+++....    .++..+....+...+.+|+
T Consensus        47 ~~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~  123 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIG-SG-LGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDL  123 (266)
T ss_dssp             HTTTCCCCTTCEEEEET-CT-TSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEE
T ss_pred             HHHhcCCCCCCEEEEEC-CC-CCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEE
Confidence            34566788999999999 44 788899999985 89999999999999999876432    2222222222222467999


Q ss_pred             EEeCCC--C---------cHHHHHhhccCCEEEEEc
Q 023273          218 VFDAVG--Q---------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       218 vid~~g--~---------~~~~~~~l~~~G~~v~~g  242 (284)
                      |+....  .         +..+.+.|+++|++++..
T Consensus       124 v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~  159 (266)
T 3ujc_A          124 IYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITD  159 (266)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence            987532  1         267888999999999874

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.22  E-value=0.0019  Score=53.31  Aligned_cols=98  Identities=24%  Similarity=0.165  Sum_probs=68.6

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHc----CCc---EEeeCCCcccccCCC
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL----GAD---LAIDYTKENIEDLPE  213 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~  213 (284)
                      .+...++.++++||.+| +|. |..+..+++.++ +.+++.++.+++..+.+++.    +..   .++..+.... -..+
T Consensus        85 i~~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~  161 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAG-VGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEE  161 (255)
T ss_dssp             HHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCC
T ss_pred             HHHhhCCCCCCEEEEec-CCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCC
Confidence            34567889999999999 554 888888888743 57999999999988877643    422   2222221111 1134


Q ss_pred             cccEEEeCCCC----cHHHHHhhccCCEEEEEc
Q 023273          214 KFDVVFDAVGQ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       214 ~~d~vid~~g~----~~~~~~~l~~~G~~v~~g  242 (284)
                      .+|+|+.....    ...+.+.|+++|++++..
T Consensus       162 ~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          162 NVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             SEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            69999987664    378889999999998764

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.20  E-value=0.002  Score=53.63  Aligned_cols=74  Identities=22%  Similarity=0.414  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCC-cccccC-------CC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      ..++++||+|++|++|.+.++..... |++|+++++++++.+.+.    +.+.. .++  |-.+ +.+...       .+
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  105 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSL-GARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG  105 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            46789999999999999988887774 999999999988765543    23332 122  2111 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      .+|++|+++|
T Consensus       106 ~id~lv~~Ag  115 (262)
T 3rkr_A          106 RCDVLVNNAG  115 (262)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.20  E-value=0.0013  Score=54.54  Aligned_cols=72  Identities=13%  Similarity=0.213  Sum_probs=51.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE-EeeC--CC-cccccC-------CCcccEEE
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL-AIDY--TK-ENIEDL-------PEKFDVVF  219 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~-~~~~--~~-~~~~~~-------~~~~d~vi  219 (284)
                      +++|||+|+++++|++.++..... |++|+++++++++.+.+.+.+... .+.-  .+ +.....       -+++|+++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV   80 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEA-GDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV   80 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            368999999999999988887774 999999999998887776544332 2221  11 111111       35799999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +++|
T Consensus        81 NNAG   84 (247)
T 3ged_A           81 NNAC   84 (247)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.20  E-value=0.0027  Score=53.18  Aligned_cols=99  Identities=16%  Similarity=0.184  Sum_probs=68.5

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHc-----C--Cc--EEeeCCCcccccC
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL-----G--AD--LAIDYTKENIEDL  211 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~-----g--~~--~~~~~~~~~~~~~  211 (284)
                      .+....+.++++||.+| +| .|..+..+++..+ +.+++.++.+++..+.+++.     |  ..  .++..+.......
T Consensus        91 i~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~  168 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAG-AG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELP  168 (280)
T ss_dssp             HHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCC
T ss_pred             HHHHcCCCCCCEEEEEc-cc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCC
Confidence            34566789999999999 55 7888888888643 57999999999988777643     3  22  2222221111111


Q ss_pred             CCcccEEEeCCCC----cHHHHHhhccCCEEEEEc
Q 023273          212 PEKFDVVFDAVGQ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       212 ~~~~d~vid~~g~----~~~~~~~l~~~G~~v~~g  242 (284)
                      .+.+|+|+.....    ...+.+.|+++|++++..
T Consensus       169 ~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~  203 (280)
T 1i9g_A          169 DGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  203 (280)
T ss_dssp             TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            3579999876654    367888999999998765

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.20  E-value=0.0023  Score=54.26  Aligned_cols=74  Identities=19%  Similarity=0.286  Sum_probs=49.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCc--EEe--eCCCc--ccccC-------
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD--LAI--DYTKE--NIEDL-------  211 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~--~~~--~~~~~--~~~~~-------  211 (284)
                      ..++++||+|+++++|.++++.+... |++|+++++++++.+.+    ++.+..  .++  |-.+.  .....       
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSN-GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            35789999999999999988888774 99999999998876544    222321  222  22221  11111       


Q ss_pred             CCcccEEEeCCC
Q 023273          212 PEKFDVVFDAVG  223 (284)
Q Consensus       212 ~~~~d~vid~~g  223 (284)
                      .+++|++|+++|
T Consensus        89 ~g~iD~lv~nAg  100 (311)
T 3o26_A           89 FGKLDILVNNAG  100 (311)
T ss_dssp             HSSCCEEEECCC
T ss_pred             CCCCCEEEECCc
Confidence            247999999988

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.18  E-value=0.0012  Score=58.79  Aligned_cols=90  Identities=20%  Similarity=0.226  Sum_probs=71.4

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC--
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--  224 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~--  224 (284)
                      ..-.|++|.|+| .|.+|..+++.++.+ |++|+++++++.+...+...|....      ++.+.....|+++.+.++  
T Consensus       207 ~~L~GktVgIiG-~G~IG~~vA~~Lka~-Ga~Viv~D~~p~~a~~A~~~G~~~~------sL~eal~~ADVVilt~gt~~  278 (436)
T 3h9u_A          207 VMIAGKTACVCG-YGDVGKGCAAALRGF-GARVVVTEVDPINALQAAMEGYQVL------LVEDVVEEAHIFVTTTGNDD  278 (436)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEEC------CHHHHTTTCSEEEECSSCSC
T ss_pred             CcccCCEEEEEe-eCHHHHHHHHHHHHC-CCEEEEECCChhhhHHHHHhCCeec------CHHHHHhhCCEEEECCCCcC
Confidence            345799999999 999999999999995 9999999999888777777775321      244445679999988874  


Q ss_pred             -c-HHHHHhhccCCEEEEEcCC
Q 023273          225 -C-DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       225 -~-~~~~~~l~~~G~~v~~g~~  244 (284)
                       . ...++.|++++.++.++-.
T Consensus       279 iI~~e~l~~MK~gAIVINvgRg  300 (436)
T 3h9u_A          279 IITSEHFPRMRDDAIVCNIGHF  300 (436)
T ss_dssp             SBCTTTGGGCCTTEEEEECSSS
T ss_pred             ccCHHHHhhcCCCcEEEEeCCC
Confidence             2 5788899999988888643

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=97.13  E-value=0.003  Score=53.67  Aligned_cols=95  Identities=15%  Similarity=0.198  Sum_probs=68.3

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CCc---EEeeCCCcccccCCCcc
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD---LAIDYTKENIEDLPEKF  215 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~  215 (284)
                      +...+++++++||-+| +| .|..+..+++.. +.+++.++.+++..+.+++.    +..   .++..   +..+..+.+
T Consensus        65 ~~~~~~~~~~~vLDiG-cG-~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~f  138 (302)
T 3hem_A           65 LDKLNLEPGMTLLDIG-CG-WGSTMRHAVAEY-DVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ---GWEEFDEPV  138 (302)
T ss_dssp             HHTTCCCTTCEEEEET-CT-TSHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC---CGGGCCCCC
T ss_pred             HHHcCCCCcCEEEEee-cc-CcHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC---CHHHcCCCc
Confidence            3567789999999999 55 488889999985 79999999999988777643    322   12222   222336789


Q ss_pred             cEEEeCCC-----C-------------cHHHHHhhccCCEEEEEcC
Q 023273          216 DVVFDAVG-----Q-------------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       216 d~vid~~g-----~-------------~~~~~~~l~~~G~~v~~g~  243 (284)
                      |+|+....     +             +..+.+.|+++|++++...
T Consensus       139 D~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  184 (302)
T 3hem_A          139 DRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  184 (302)
T ss_dssp             SEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred             cEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence            99986421     0             2578889999999998643

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.11  E-value=0.0027  Score=53.31  Aligned_cols=42  Identities=24%  Similarity=0.431  Sum_probs=36.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .++++||+|++|++|.+.++.+... |++|+++++++++.+.+
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~   72 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQ-GLKVVGCARTVGNIEEL   72 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEECChHHHHHH
Confidence            5789999999999999999888874 99999999988776544

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.10  E-value=0.0028  Score=51.96  Aligned_cols=73  Identities=25%  Similarity=0.312  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEeeCCCcc---ccc---CCCcccEEEeCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKEN---IED---LPEKFDVVFDAV  222 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~---~~~---~~~~~d~vid~~  222 (284)
                      ++++++|+|++|++|.+.++.+... |++|+++++++++.+.+. ++....++..+-.+   +..   ..+++|++|+++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A   84 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHAT-GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA   84 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECC
Confidence            5789999999999999999888874 999999999888776553 33222333221111   111   124689999998


Q ss_pred             C
Q 023273          223 G  223 (284)
Q Consensus       223 g  223 (284)
                      |
T Consensus        85 g   85 (244)
T 3d3w_A           85 A   85 (244)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.09  E-value=0.0012  Score=53.35  Aligned_cols=89  Identities=19%  Similarity=0.192  Sum_probs=61.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCCcccccCCCcccEEEeCCCCc------
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKENIEDLPEKFDVVFDAVGQC------  225 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~d~vid~~g~~------  225 (284)
                      +|+|+||+|.+|...++.+... |.+|+++++++++...+...+...+ .|..+... ...+++|+||+++|..      
T Consensus         2 kilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~~~~~~~~   79 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRR-GHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-ADLDSVDAVVDALSVPWGSGRG   79 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-HHHTTCSEEEECCCCCTTSSCT
T ss_pred             EEEEEcCCCHHHHHHHHHHHHC-CCEEEEEEecccccccccCCCceEEecccccccH-hhcccCCEEEECCccCCCcchh
Confidence            6999999999999999988884 9999999999888775543333222 12221111 3346899999998741      


Q ss_pred             -------HHHHHhhcc-CCEEEEEcC
Q 023273          226 -------DKALKAVKE-GGRVVSIIG  243 (284)
Q Consensus       226 -------~~~~~~l~~-~G~~v~~g~  243 (284)
                             ..+++.++. ++++|.++.
T Consensus        80 ~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           80 YLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             HHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             hHHHHHHHHHHHHHHHcCCcEEEEec
Confidence                   345555543 478888853

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=97.08  E-value=0.0035  Score=53.86  Aligned_cols=99  Identities=23%  Similarity=0.312  Sum_probs=67.9

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCcccccCCCcc
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKF  215 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~  215 (284)
                      +....++++++||.+| +|. |..+..+++... ..+++.++.+++..+.+++    .+..  .++..+........+.+
T Consensus        68 ~~~l~~~~~~~VLDiG-cG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~f  145 (317)
T 1dl5_A           68 MEWVGLDKGMRVLEIG-GGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPY  145 (317)
T ss_dssp             HHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred             HHhcCCCCcCEEEEec-CCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCe
Confidence            4566788999999999 555 888888888742 2469999999998877764    2432  22222211111123579


Q ss_pred             cEEEeCCC--C-cHHHHHhhccCCEEEEEcC
Q 023273          216 DVVFDAVG--Q-CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       216 d~vid~~g--~-~~~~~~~l~~~G~~v~~g~  243 (284)
                      |+|+....  . .+.+.+.|+++|++++...
T Consensus       146 D~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~~  176 (317)
T 1dl5_A          146 DVIFVTVGVDEVPETWFTQLKEGGRVIVPIN  176 (317)
T ss_dssp             EEEEECSBBSCCCHHHHHHEEEEEEEEEEBC
T ss_pred             EEEEEcCCHHHHHHHHHHhcCCCcEEEEEEC
Confidence            99987654  2 4788899999999988643

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.07  E-value=0.0023  Score=53.20  Aligned_cols=73  Identities=22%  Similarity=0.456  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcEE-e--eCCC-cccccC-------CCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA-I--DYTK-ENIEDL-------PEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~-~--~~~~-~~~~~~-------~~~  214 (284)
                      .|+++||+|+++++|++.++..... |++|+++++++++.+.+    ++.|.... +  |-.+ +.....       -++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~-Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   84 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALN-DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR   84 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5889999999999999988887774 99999999998887655    34454322 2  2111 111111       357


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++++++|
T Consensus        85 iDiLVNNAG   93 (254)
T 4fn4_A           85 IDVLCNNAG   93 (254)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.06  E-value=0.002  Score=51.96  Aligned_cols=89  Identities=16%  Similarity=0.252  Sum_probs=60.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe--eCCC--cccccCCCcccEEEeCCCCc---
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTK--ENIEDLPEKFDVVFDAVGQC---  225 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~--~~~~~~~~~~d~vid~~g~~---  225 (284)
                      +|+|+||+|.+|...++.+... |.+|+++++++++.+..   ....++  |..+  +.+.+.-+++|+||+++|..   
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~   77 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTT-DYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKS   77 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTS-SCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSS
T ss_pred             eEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCC
Confidence            7999999999999999998884 89999999988765432   211222  2222  23444456899999998831   


Q ss_pred             ---------HHHHHhhccC--CEEEEEcCCC
Q 023273          226 ---------DKALKAVKEG--GRVVSIIGSV  245 (284)
Q Consensus       226 ---------~~~~~~l~~~--G~~v~~g~~~  245 (284)
                               ..+++.++..  +++|.++...
T Consensus        78 ~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           78 LLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             CCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             cEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence                     2345544443  5898886543

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=97.06  E-value=0.0018  Score=51.15  Aligned_cols=99  Identities=15%  Similarity=0.127  Sum_probs=66.7

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHc----CC---cEEeeCCCcccc-cCCCc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL----GA---DLAIDYTKENIE-DLPEK  214 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~----g~---~~~~~~~~~~~~-~~~~~  214 (284)
                      ....++++++||-+| +|. |..+..+++..+ ..+++.++.+++..+.+++.    +.   ..++..+...+. ...+.
T Consensus        16 ~~~~~~~~~~vLDlG-cG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~   93 (197)
T 3eey_A           16 IKMFVKEGDTVVDAT-CGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCP   93 (197)
T ss_dssp             HHHHCCTTCEEEESC-CTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSC
T ss_pred             HHhcCCCCCEEEEcC-CCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCC
Confidence            345678899999998 444 778888888742 36999999999988777543    32   123333322232 23467


Q ss_pred             ccEEEeCCCC------------------cHHHHHhhccCCEEEEEcCC
Q 023273          215 FDVVFDAVGQ------------------CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       215 ~d~vid~~g~------------------~~~~~~~l~~~G~~v~~g~~  244 (284)
                      +|+|+...+-                  ...+.+.|+++|+++++...
T Consensus        94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~  141 (197)
T 3eey_A           94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY  141 (197)
T ss_dssp             EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred             ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence            9998865421                  36788899999999987543

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.04  E-value=0.0003  Score=57.74  Aligned_cols=92  Identities=17%  Similarity=0.255  Sum_probs=61.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHHcCCcEEe--eCCC-cccccCCCcccEEEeCCCCc-
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAI--DYTK-ENIEDLPEKFDVVFDAVGQC-  225 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~-~~~~~~~~~~d~vid~~g~~-  225 (284)
                      .++|+|+||+|.+|.+.++.+... | .+|+++++++++...+...+. .++  |..+ +.+...-+++|++|++.|.. 
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~-G~~~V~~~~R~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~  100 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADK-QTIKQTLFARQPAKIHKPYPTNS-QIIMGDVLNHAALKQAMQGQDIVYANLTGED  100 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTC-TTEEEEEEESSGGGSCSSCCTTE-EEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhC-CCceEEEEEcChhhhcccccCCc-EEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence            468999999999999999988874 7 899999998876543222121 122  2211 22333345899999998741 


Q ss_pred             -----HHHHHhhccC--CEEEEEcCC
Q 023273          226 -----DKALKAVKEG--GRVVSIIGS  244 (284)
Q Consensus       226 -----~~~~~~l~~~--G~~v~~g~~  244 (284)
                           +.+++.++..  ++||.++..
T Consensus       101 ~~~~~~~~~~~~~~~~~~~iV~iSS~  126 (236)
T 3qvo_A          101 LDIQANSVIAAMKACDVKRLIFVLSL  126 (236)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             hhHHHHHHHHHHHHcCCCEEEEEecc
Confidence                 4455655543  689988653

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.04  E-value=0.0046  Score=52.43  Aligned_cols=94  Identities=24%  Similarity=0.312  Sum_probs=61.3

Q ss_pred             CCCCEEEEEcCCch--HHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcEEeeCC--C-cccccC-------C
Q 023273          149 SAGKSILVLGGAGG--VGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYT--K-ENIEDL-------P  212 (284)
Q Consensus       149 ~~g~~vlI~ga~g~--~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~--~-~~~~~~-------~  212 (284)
                      -.++++||+|++|.  +|.+.++.+... |++|+++.++++..+.++    +.+....+.-+  + +.....       .
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREA-GAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHT-TCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            46889999999855  999988887774 999999998865443332    33432232221  1 111111       3


Q ss_pred             CcccEEEeCCCCc--------------------------------HHHHHhhccCCEEEEEcC
Q 023273          213 EKFDVVFDAVGQC--------------------------------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       213 ~~~d~vid~~g~~--------------------------------~~~~~~l~~~G~~v~~g~  243 (284)
                      +++|++|+++|..                                +.++..|+++|++|.++.
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS  170 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY  170 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence            5799999998721                                134556677899998854

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=97.03  E-value=0.0026  Score=51.63  Aligned_cols=94  Identities=13%  Similarity=0.253  Sum_probs=65.4

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcC-------CeEEEEeCChhhHHHHHHc----C-------CcEEeeCCCcc-
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFG-------ASKVAATSSTAKLDLLRSL----G-------ADLAIDYTKEN-  207 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-------~~vi~~~~~~~~~~~~~~~----g-------~~~~~~~~~~~-  207 (284)
                      .++++++||.+| +|. |..+..+++.. +       .+++.++.+++..+.+++.    +       ...++..+... 
T Consensus        81 ~~~~~~~VLdiG-~G~-G~~~~~la~~~-~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~  157 (227)
T 1r18_A           81 HLKPGARILDVG-SGS-GYLTACFYRYI-KAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG  157 (227)
T ss_dssp             TCCTTCEEEEES-CTT-SHHHHHHHHHH-HHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC
T ss_pred             hCCCCCEEEEEC-CCc-cHHHHHHHHhc-ccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccC
Confidence            578999999999 554 88888888864 4       5899999999888777542    1       11222222111 


Q ss_pred             cccCCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCC
Q 023273          208 IEDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       208 ~~~~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~  244 (284)
                      +.. ...||+|+.....   ++.+.+.|+++|++++.-+.
T Consensus       158 ~~~-~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~~  196 (227)
T 1r18_A          158 YPP-NAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGP  196 (227)
T ss_dssp             CGG-GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEESC
T ss_pred             CCc-CCCccEEEECCchHHHHHHHHHHhcCCCEEEEEEec
Confidence            111 2569999877652   58899999999999886543

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=97.03  E-value=0.0033  Score=51.02  Aligned_cols=98  Identities=19%  Similarity=0.159  Sum_probs=68.6

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC----cEEeeCCCcccccCCCcccEE
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA----DLAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~d~v  218 (284)
                      +......++++||.+| +|. |..+..+++.  +.+++.++.+++..+.+++...    ..++..+........+.+|+|
T Consensus        63 ~~~~~~~~~~~vLdiG-~G~-G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v  138 (231)
T 1vbf_A           63 LDELDLHKGQKVLEIG-TGI-GYYTALIAEI--VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRV  138 (231)
T ss_dssp             HHHTTCCTTCEEEEEC-CTT-SHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEE
T ss_pred             HHhcCCCCCCEEEEEc-CCC-CHHHHHHHHH--cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEE
Confidence            3556778999999999 554 8888888886  4899999999998888875421    122222211111123579999


Q ss_pred             EeCCC--C-cHHHHHhhccCCEEEEEcCC
Q 023273          219 FDAVG--Q-CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       219 id~~g--~-~~~~~~~l~~~G~~v~~g~~  244 (284)
                      +....  . ...+.+.|+++|++++.-..
T Consensus       139 ~~~~~~~~~~~~~~~~L~pgG~l~~~~~~  167 (231)
T 1vbf_A          139 VVWATAPTLLCKPYEQLKEGGIMILPIGV  167 (231)
T ss_dssp             EESSBBSSCCHHHHHTEEEEEEEEEEECS
T ss_pred             EECCcHHHHHHHHHHHcCCCcEEEEEEcC
Confidence            87654  2 47899999999999987543

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.03  E-value=0.0071  Score=45.21  Aligned_cols=91  Identities=15%  Similarity=0.154  Sum_probs=65.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe-eCCCc-ccccC-CCcccEEEeCCCCc-
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKE-NIEDL-PEKFDVVFDAVGQC-  225 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~-~~~~~-~~~~d~vid~~g~~-  225 (284)
                      -.++|+|+| .|.+|...++.++.. |.+++++++++++.+.+++.|...+. |.... .+... .+.+|+++.++++. 
T Consensus         6 ~~~~viIiG-~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~   83 (140)
T 3fwz_A            6 ICNHALLVG-YGRVGSLLGEKLLAS-DIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGY   83 (140)
T ss_dssp             CCSCEEEEC-CSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHH
T ss_pred             CCCCEEEEC-cCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChH
Confidence            357899999 799999999999985 99999999999999999888765443 22222 12222 35799999999863 


Q ss_pred             -----HHHHHhhccCCEEEEEc
Q 023273          226 -----DKALKAVKEGGRVVSII  242 (284)
Q Consensus       226 -----~~~~~~l~~~G~~v~~g  242 (284)
                           -...+.+.+..+++...
T Consensus        84 ~n~~~~~~a~~~~~~~~iiar~  105 (140)
T 3fwz_A           84 EAGEIVASARAKNPDIEIIARA  105 (140)
T ss_dssp             HHHHHHHHHHHHCSSSEEEEEE
T ss_pred             HHHHHHHHHHHHCCCCeEEEEE
Confidence                 23445555666766443

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.02  E-value=0.0023  Score=52.94  Aligned_cols=43  Identities=16%  Similarity=0.251  Sum_probs=36.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~  193 (284)
                      .++++||+|+++++|.+.++.+... |++|+++++++++.+.+.
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~   48 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATD-GYRVVLIARSKQNLEKVH   48 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHH-TCEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH
Confidence            5789999999999999988887774 999999999988766553

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.01  E-value=0.0034  Score=52.58  Aligned_cols=73  Identities=21%  Similarity=0.286  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCChh---hHHHHHH-cCCcEEe--eCCCc-ccccC-------CC
Q 023273          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTA---KLDLLRS-LGADLAI--DYTKE-NIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~~---~~~~~~~-~g~~~~~--~~~~~-~~~~~-------~~  213 (284)
                      .+++++|+|++  |++|.+.++.+... |++|++++++++   ..+.+++ .+....+  |-.+. .+...       .+
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999998  99999998888874 999999998765   3333332 3322222  22111 11111       34


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        84 ~id~lv~nAg   93 (275)
T 2pd4_A           84 SLDFIVHSVA   93 (275)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999987

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.01  E-value=0.0039  Score=51.58  Aligned_cols=73  Identities=25%  Similarity=0.456  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh--hhHHHHHHcCCcEE-e--eCCC-cccccC--CCcccEEEeC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST--AKLDLLRSLGADLA-I--DYTK-ENIEDL--PEKFDVVFDA  221 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~--~~~~~~~~~g~~~~-~--~~~~-~~~~~~--~~~~d~vid~  221 (284)
                      .|+++||+|+++++|++.++..... |++|+++++++  +..+.+++.|.... +  |-.+ ......  ..++|+++++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~-Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNN   86 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAA-GAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNN   86 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEEC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHc-CCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            5899999999999999988888874 99999999864  34455666664322 2  2221 111111  3579999999


Q ss_pred             CC
Q 023273          222 VG  223 (284)
Q Consensus       222 ~g  223 (284)
                      +|
T Consensus        87 AG   88 (247)
T 4hp8_A           87 AG   88 (247)
T ss_dssp             CC
T ss_pred             CC
Confidence            88

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=97.01  E-value=0.0049  Score=51.78  Aligned_cols=93  Identities=16%  Similarity=0.247  Sum_probs=65.7

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CC---cEEeeCCCcccccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA---DLAIDYTKENIEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~---~~~~~~~~~~~~~~~~~~d  216 (284)
                      +..++.++++||-+| +| .|..+..+++.. +.+++.++.+++..+.+++.    +.   ..++..+   +.+..+.+|
T Consensus        58 ~~~~~~~~~~vLDiG-cG-~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d---~~~~~~~fD  131 (287)
T 1kpg_A           58 GKLGLQPGMTLLDVG-CG-WGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG---WEQFDEPVD  131 (287)
T ss_dssp             TTTTCCTTCEEEEET-CT-TSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC---GGGCCCCCS
T ss_pred             HHcCCCCcCEEEEEC-Cc-ccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECC---hhhCCCCee
Confidence            456788999999999 44 477888888774 88999999999988877653    21   1222222   222336799


Q ss_pred             EEEeC-----CC--C----cHHHHHhhccCCEEEEEc
Q 023273          217 VVFDA-----VG--Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       217 ~vid~-----~g--~----~~~~~~~l~~~G~~v~~g  242 (284)
                      +|+..     .+  .    +..+.+.|+++|++++..
T Consensus       132 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  168 (287)
T 1kpg_A          132 RIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  168 (287)
T ss_dssp             EEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             EEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence            99865     22  1    267788999999998764

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=97.01  E-value=0.0027  Score=51.44  Aligned_cols=95  Identities=12%  Similarity=0.178  Sum_probs=66.0

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcC------CeEEEEeCChhhHHHHHHc----C-----C--cEEeeCCCcccc
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFG------ASKVAATSSTAKLDLLRSL----G-----A--DLAIDYTKENIE  209 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g------~~vi~~~~~~~~~~~~~~~----g-----~--~~~~~~~~~~~~  209 (284)
                      .++++++||.+| +|. |..++.+++.. +      .+++.++.+++..+.+++.    +     .  ..++..+.....
T Consensus        77 ~~~~~~~VLdiG-~G~-G~~~~~la~~~-~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~  153 (227)
T 2pbf_A           77 VLKPGSRAIDVG-SGS-GYLTVCMAIKM-NVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVN  153 (227)
T ss_dssp             TSCTTCEEEEES-CTT-SHHHHHHHHHT-TTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCC
T ss_pred             hCCCCCEEEEEC-CCC-CHHHHHHHHHh-cccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcc
Confidence            678999999999 554 88888888874 4      5999999999988777543    2     1  122222211111


Q ss_pred             ----cCCCcccEEEeCCC--C-cHHHHHhhccCCEEEEEcCC
Q 023273          210 ----DLPEKFDVVFDAVG--Q-CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       210 ----~~~~~~d~vid~~g--~-~~~~~~~l~~~G~~v~~g~~  244 (284)
                          ...+.+|+|+....  . +..+.+.|+++|++++.-.+
T Consensus       154 ~~~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~~  195 (227)
T 2pbf_A          154 EEEKKELGLFDAIHVGASASELPEILVDLLAENGKLIIPIEE  195 (227)
T ss_dssp             HHHHHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEEE
T ss_pred             cccCccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEcc
Confidence                11356999987654  2 58899999999999887543

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=97.00  E-value=0.0053  Score=49.65  Aligned_cols=95  Identities=16%  Similarity=0.203  Sum_probs=64.7

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcC--CeEEEEeCChhhHHHHHHc----C-------CcEEeeCCCcccccCCC
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSL----G-------ADLAIDYTKENIEDLPE  213 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~~~~~~~~~~~~----g-------~~~~~~~~~~~~~~~~~  213 (284)
                      .++++++||.+| +|. |..+..+++.. +  .+++.++.+++..+.+++.    +       ...++..+.........
T Consensus        74 ~~~~~~~vLDiG-~G~-G~~~~~la~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~  150 (226)
T 1i1n_A           74 QLHEGAKALDVG-SGS-GILTACFARMV-GCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEA  150 (226)
T ss_dssp             TSCTTCEEEEET-CTT-SHHHHHHHHHH-CTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGC
T ss_pred             hCCCCCEEEEEc-CCc-CHHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCC
Confidence            478999999999 454 88888888874 4  6899999999988777532    1       11222222111111135


Q ss_pred             cccEEEeCCC--C-cHHHHHhhccCCEEEEEcCC
Q 023273          214 KFDVVFDAVG--Q-CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       214 ~~d~vid~~g--~-~~~~~~~l~~~G~~v~~g~~  244 (284)
                      .+|+|+....  . +..+.+.|+++|++++.-.+
T Consensus       151 ~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~~  184 (226)
T 1i1n_A          151 PYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGP  184 (226)
T ss_dssp             CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEESC
T ss_pred             CcCEEEECCchHHHHHHHHHhcCCCcEEEEEEec
Confidence            6999987654  2 58899999999999886544

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.99  E-value=0.0044  Score=51.01  Aligned_cols=96  Identities=22%  Similarity=0.193  Sum_probs=66.5

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC---cEEeeCCCcccccCCCcc
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA---DLAIDYTKENIEDLPEKF  215 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~~~~  215 (284)
                      +....+.++++||-+| +|. |..+..+++.. +.+++.++.+++..+.+++    .+.   ..++..+...... .+.+
T Consensus        29 ~~~~~~~~~~~VLDiG-cG~-G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~f  104 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLG-SGS-GEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKC  104 (256)
T ss_dssp             HHHTCCCTTCEEEEET-CTT-CHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCE
T ss_pred             HHhcCCCCCCEEEEEC-CCC-CHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCC
Confidence            3556788999999999 444 88888899885 8899999999988877754    332   1222222222222 4679


Q ss_pred             cEEEeCCC-----C----cHHHHHhhccCCEEEEEc
Q 023273          216 DVVFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       216 d~vid~~g-----~----~~~~~~~l~~~G~~v~~g  242 (284)
                      |+|+....     +    +..+.+.|+++|++++..
T Consensus       105 D~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          105 DVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             EEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             CEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence            99986321     2    367778899999998763

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.98  E-value=0.0031  Score=51.91  Aligned_cols=72  Identities=26%  Similarity=0.388  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEe--eCCC-cccccC-------CCcccEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAI--DYTK-ENIEDL-------PEKFDVV  218 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~--~~~~-~~~~~~-------~~~~d~v  218 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+. +++. ..+  |-.+ +.+...       .+.+|++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   81 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKE-GARLVACDIEEGPLREAAEAVGA-HPVVMDVADPASVERGFAEALAHLGRLDGV   81 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTTC-EEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCC-EEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999998888874 999999999988776554 3442 222  2221 111111       2469999


Q ss_pred             EeCCC
Q 023273          219 FDAVG  223 (284)
Q Consensus       219 id~~g  223 (284)
                      |+++|
T Consensus        82 vn~Ag   86 (245)
T 1uls_A           82 VHYAG   86 (245)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.95  E-value=0.0029  Score=52.44  Aligned_cols=72  Identities=22%  Similarity=0.345  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCC--C-cccccC-------CCcccEEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYT--K-ENIEDL-------PEKFDVVF  219 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~--~-~~~~~~-------~~~~d~vi  219 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+..+++.. ..+.-+  + +.+...       .+++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFARE-GALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5789999999999999988888774 9999999998777333344432 333222  1 111111       24799999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +++|
T Consensus        83 ~~Ag   86 (256)
T 2d1y_A           83 NNAA   86 (256)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.95  E-value=0.0018  Score=53.39  Aligned_cols=73  Identities=29%  Similarity=0.433  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe--eCCC-cccccC---CCcccEEEeCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTK-ENIEDL---PEKFDVVFDAVG  223 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~-~~~~~~---~~~~d~vid~~g  223 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+.++.....+  |-.+ +.+.+.   .+++|++|+++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag   83 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFARE-GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence            5789999999999999988888874 99999999988776544433211222  2211 111111   357999999987

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.95  E-value=0.0028  Score=52.76  Aligned_cols=73  Identities=26%  Similarity=0.306  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcEE-e--eCCC-ccccc-------CCCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA-I--DYTK-ENIED-------LPEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~-~--~~~~-~~~~~-------~~~~  214 (284)
                      .|+++||+|+++++|++.++..... |++|+++++++++.+..    ++.|.+.. +  |-.+ +....       .-++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~-Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAA-GARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            6899999999999999988888874 99999999988876544    33443322 1  1111 11111       1457


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++++++|
T Consensus        87 iDiLVNNAG   95 (255)
T 4g81_D           87 VDILINNAG   95 (255)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCC
Confidence            999999988

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.95  E-value=0.006  Score=50.97  Aligned_cols=95  Identities=28%  Similarity=0.440  Sum_probs=61.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC-hhhHHHH----HHcCCc-EEeeCC--C-cccccC-------C
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-TAKLDLL----RSLGAD-LAIDYT--K-ENIEDL-------P  212 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~-~~~~~~~----~~~g~~-~~~~~~--~-~~~~~~-------~  212 (284)
                      -.++++||+|+++++|.+.++..... |++|+++++. +++.+.+    ++.+.. ..+.-+  + +.....       .
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRL-GAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF   94 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999988888774 9999987764 4443332    334433 222211  1 111111       2


Q ss_pred             CcccEEEeCCCC-----c-----------------------HHHHHhhccCCEEEEEcCC
Q 023273          213 EKFDVVFDAVGQ-----C-----------------------DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       213 ~~~d~vid~~g~-----~-----------------------~~~~~~l~~~G~~v~~g~~  244 (284)
                      +.+|++++++|.     +                       +.++..|.++|++|.++..
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~  154 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN  154 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence            479999999872     0                       2456677789999998653

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.93  E-value=0.0076  Score=50.61  Aligned_cols=36  Identities=28%  Similarity=0.287  Sum_probs=31.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      -.++++||+|+++++|.+.++..... |++|++++++
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~~~   43 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAEE-GADIILFDIC   43 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHC-CCeEEEEccc
Confidence            35789999999999999988888774 9999999876

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.92  E-value=0.0032  Score=51.81  Aligned_cols=75  Identities=21%  Similarity=0.361  Sum_probs=52.4

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcE-EeeCCCcc---ccc---CCCcccEEE
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADL-AIDYTKEN---IED---LPEKFDVVF  219 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~-~~~~~~~~---~~~---~~~~~d~vi  219 (284)
                      ..+++++||+|++|++|.+.++.+... |++|+++++++++.+.+. ++.... ++..+-.+   ..+   ..+++|++|
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li   89 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKL-GSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILV   89 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            457889999999999999988887774 999999999988877664 343222 11111111   111   135799999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +++|
T Consensus        90 ~~Ag   93 (249)
T 3f9i_A           90 CNAG   93 (249)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=96.91  E-value=0.0068  Score=50.37  Aligned_cols=73  Identities=16%  Similarity=0.237  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCch--HHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCC--cEEe--eCCC-cccccC-------
Q 023273          150 AGKSILVLGGAGG--VGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGA--DLAI--DYTK-ENIEDL-------  211 (284)
Q Consensus       150 ~g~~vlI~ga~g~--~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~--~~~~--~~~~-~~~~~~-------  211 (284)
                      .+++++|+|++|.  +|.+.++..... |++|+++.++++..+.++    +.+.  ...+  |-.+ +.+...       
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEA-GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            5789999999955  999988887774 999999998765544443    2332  1222  2211 111111       


Q ss_pred             CCcccEEEeCCC
Q 023273          212 PEKFDVVFDAVG  223 (284)
Q Consensus       212 ~~~~d~vid~~g  223 (284)
                      .+.+|++++++|
T Consensus        85 ~g~id~li~~Ag   96 (266)
T 3oig_A           85 VGVIHGIAHCIA   96 (266)
T ss_dssp             HSCCCEEEECCC
T ss_pred             hCCeeEEEEccc
Confidence            247999999876

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.89  E-value=0.0015  Score=53.34  Aligned_cols=95  Identities=23%  Similarity=0.243  Sum_probs=65.4

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CCc---EEeeCCCcc-cccC--CCc
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD---LAIDYTKEN-IEDL--PEK  214 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~-~~~~--~~~  214 (284)
                      .....++++||.+| +| .|..+..+++...+.+++.++.+++..+.+++.    +..   .++..+... ....  .+.
T Consensus        49 ~~~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~  126 (233)
T 2gpy_A           49 LLKMAAPARILEIG-TA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPL  126 (233)
T ss_dssp             HHHHHCCSEEEEEC-CT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCC
T ss_pred             HHhccCCCEEEEec-CC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCC
Confidence            34556889999999 55 788888898874468999999999988877643    421   222222111 1222  357


Q ss_pred             ccEEEeCCC--C----cHHHHHhhccCCEEEEE
Q 023273          215 FDVVFDAVG--Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       215 ~d~vid~~g--~----~~~~~~~l~~~G~~v~~  241 (284)
                      +|+|+....  .    +..+.+.|+++|+++..
T Consensus       127 fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  159 (233)
T 2gpy_A          127 FDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD  159 (233)
T ss_dssp             EEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             ccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            999886544  2    26788899999999875

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.89  E-value=0.0091  Score=49.97  Aligned_cols=94  Identities=24%  Similarity=0.404  Sum_probs=60.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC-hhhHHHH----HHcCCcE-EeeCC--C-cccccC-------C
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-TAKLDLL----RSLGADL-AIDYT--K-ENIEDL-------P  212 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~-~~~~~~~----~~~g~~~-~~~~~--~-~~~~~~-------~  212 (284)
                      -.++++||+|+++++|.+.++..... |++|+++.+. +++.+.+    ++.+... .+.-+  + +.+...       .
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALE-GAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL  107 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999988887774 9999988654 3444333    3334332 22221  1 111111       2


Q ss_pred             CcccEEEeCCCC----c------------------------HHHHHhhccCCEEEEEcC
Q 023273          213 EKFDVVFDAVGQ----C------------------------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       213 ~~~d~vid~~g~----~------------------------~~~~~~l~~~G~~v~~g~  243 (284)
                      +++|++|+++|.    +                        +.++..|+++|++|.++.
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS  166 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS  166 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence            479999999872    0                        235566777899998854

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.88  E-value=0.0076  Score=51.00  Aligned_cols=94  Identities=22%  Similarity=0.365  Sum_probs=60.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh-HHHH----HHcCCcE-Ee--eCCCc-ccccC-------C
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLL----RSLGADL-AI--DYTKE-NIEDL-------P  212 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~-~~~~----~~~g~~~-~~--~~~~~-~~~~~-------~  212 (284)
                      -.++++||+|++|++|.+.++.+... |++|+++++++++ .+.+    ++.+... .+  |-.+. .....       .
T Consensus        45 l~gk~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           45 LKGKNVLITGGDSGIGRAVSIAFAKE-GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL  123 (291)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999988888874 9999999987653 2222    2334322 22  22111 11111       2


Q ss_pred             CcccEEEeCCCC------c-----------------------HHHHHhhccCCEEEEEcC
Q 023273          213 EKFDVVFDAVGQ------C-----------------------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       213 ~~~d~vid~~g~------~-----------------------~~~~~~l~~~G~~v~~g~  243 (284)
                      +.+|++|+++|.      .                       +.++..|+++|++|.++.
T Consensus       124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS  183 (291)
T 3ijr_A          124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS  183 (291)
T ss_dssp             SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence            479999998762      0                       134455667899998864

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.87  E-value=0.0015  Score=54.93  Aligned_cols=93  Identities=16%  Similarity=0.129  Sum_probs=61.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-cccccCCCcccEEEeCCCCc-----
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVGQC-----  225 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~d~vid~~g~~-----  225 (284)
                      +|+|+||+|.+|...++.+....+.+|+++++++++...+...+...+ .|..+ +.+...-+++|+||.+++..     
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~   81 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSFK   81 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHHH
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccchh
Confidence            699999999999998888766238999999998877654433333211 22222 22334457899999998731     


Q ss_pred             -----HHHHHhhccC--CEEEEEcCCC
Q 023273          226 -----DKALKAVKEG--GRVVSIIGSV  245 (284)
Q Consensus       226 -----~~~~~~l~~~--G~~v~~g~~~  245 (284)
                           ..+++.++..  +++|.++...
T Consensus        82 ~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           82 RIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             hHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence                 3445555443  5888886543

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.87  E-value=0.0047  Score=51.27  Aligned_cols=74  Identities=23%  Similarity=0.384  Sum_probs=51.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCc-EEe--eCCC-cccccC-------CCccc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAI--DYTK-ENIEDL-------PEKFD  216 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~--~~~~-~~~~~~-------~~~~d  216 (284)
                      ..++++||+|++|++|.+.++.+... |++|++++++.++.+.+ ++++.. ..+  |-.+ +.....       .+++|
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   84 (259)
T 4e6p_A            6 LEGKSALITGSARGIGRAFAEAYVRE-GATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLD   84 (259)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            35789999999999999988887774 99999999988877655 344432 222  2211 111111       34799


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      ++++++|
T Consensus        85 ~lv~~Ag   91 (259)
T 4e6p_A           85 ILVNNAA   91 (259)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.85  E-value=0.008  Score=46.87  Aligned_cols=96  Identities=20%  Similarity=0.212  Sum_probs=65.1

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCccccc-CCCcccE
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIED-LPEKFDV  217 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~-~~~~~d~  217 (284)
                      ...++++++||-+| +| .|..+..+++.  +.+|+.++.+++..+.+++    .+..  .++......+.. ..+.+|+
T Consensus        17 ~~~~~~~~~vLDiG-cG-~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~   92 (185)
T 3mti_A           17 AEVLDDESIVVDAT-MG-NGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRA   92 (185)
T ss_dssp             HTTCCTTCEEEESC-CT-TSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEE
T ss_pred             HHhCCCCCEEEEEc-CC-CCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCE
Confidence            45678999999998 44 48888888876  7899999999998877754    2322  233322222221 2456999


Q ss_pred             EEeCCC-----------C-------cHHHHHhhccCCEEEEEcCC
Q 023273          218 VFDAVG-----------Q-------CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       218 vid~~g-----------~-------~~~~~~~l~~~G~~v~~g~~  244 (284)
                      |+.+.+           .       ...+.+.|+++|+++++..+
T Consensus        93 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  137 (185)
T 3mti_A           93 AIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY  137 (185)
T ss_dssp             EEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred             EEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence            876532           1       15677899999999987644

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.85  E-value=0.0029  Score=52.69  Aligned_cols=73  Identities=29%  Similarity=0.444  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcC--CcEEeeCC--C-cccccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLG--ADLAIDYT--K-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g--~~~~~~~~--~-~~~~~~-------~~  213 (284)
                      .++++||+|+++++|.+.++..... |++|+++++++++.+.+.    +.+  ....+..+  + +.....       .+
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARA-GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999988887774 999999999988765542    233  11222211  1 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++++++|
T Consensus        88 ~id~lvnnAg   97 (262)
T 3pk0_A           88 GIDVVCANAG   97 (262)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.85  E-value=0.0063  Score=49.72  Aligned_cols=73  Identities=22%  Similarity=0.289  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEe--eCCC-cccccC---CCcccEEEeCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAI--DYTK-ENIEDL---PEKFDVVFDAV  222 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~--~~~~-~~~~~~---~~~~d~vid~~  222 (284)
                      .+++++|+|++|++|...++.+... |++|+++++++++.+.+.+ ......+  |-.+ +.+.+.   .+.+|++|+++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A   84 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHAS-GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA   84 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECC
Confidence            5789999999999999998888874 9999999998877665533 3222233  2111 111111   24689999998


Q ss_pred             C
Q 023273          223 G  223 (284)
Q Consensus       223 g  223 (284)
                      |
T Consensus        85 g   85 (244)
T 1cyd_A           85 A   85 (244)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.84  E-value=0.005  Score=51.46  Aligned_cols=93  Identities=20%  Similarity=0.357  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH----HHcCCc-EEe--eCCC-cccccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~----~~~g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      .++++||+|+++++|.+.++..... |++|+++.. ++++.+.+    +..+.. ..+  |-.+ +.....       .+
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~-G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASD-GFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHH-TCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988877774 999998754 44444433    333432 222  2211 111111       24


Q ss_pred             cccEEEeCCCC-----c-----------------------HHHHHhhccCCEEEEEcC
Q 023273          214 KFDVVFDAVGQ-----C-----------------------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       214 ~~d~vid~~g~-----~-----------------------~~~~~~l~~~G~~v~~g~  243 (284)
                      ++|++|+++|.     .                       +.++..|+++|++|.++.
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS  162 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST  162 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence            79999999872     0                       135556667899998864

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.84  E-value=0.0044  Score=51.87  Aligned_cols=73  Identities=25%  Similarity=0.410  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEeeCC--C-cccccC-------CCcccEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYT--K-ENIEDL-------PEKFDVV  218 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~--~-~~~~~~-------~~~~d~v  218 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+. ++.....+..+  + +.+...       .+++|++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   86 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNS-GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   86 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999988888874 999999999888776554 33322222221  1 111111       2479999


Q ss_pred             EeCCC
Q 023273          219 FDAVG  223 (284)
Q Consensus       219 id~~g  223 (284)
                      |+++|
T Consensus        87 v~nAg   91 (270)
T 1yde_A           87 VNNAG   91 (270)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.84  E-value=0.0071  Score=51.61  Aligned_cols=97  Identities=16%  Similarity=0.185  Sum_probs=67.5

Q ss_pred             Hhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC---cEEeeCCCcccccCCCcc
Q 023273          144 ERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA---DLAIDYTKENIEDLPEKF  215 (284)
Q Consensus       144 ~~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~~~~  215 (284)
                      +... +.++++||-+| +| .|..+..+++.. +.+++.++.+++..+.+++    .+.   ..++..+...++...+.+
T Consensus       110 ~~l~~~~~~~~vLDiG-cG-~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f  186 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAG-CG-RGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAV  186 (312)
T ss_dssp             TTSCCCCTTCEEEEES-CT-TSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCE
T ss_pred             HHhccCCCCCEEEEec-CC-CCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCE
Confidence            3344 78999999999 44 588888888874 8999999999998877764    332   122332222222224679


Q ss_pred             cEEEeCCC----C----cHHHHHhhccCCEEEEEcC
Q 023273          216 DVVFDAVG----Q----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       216 d~vid~~g----~----~~~~~~~l~~~G~~v~~g~  243 (284)
                      |+|+....    +    +..+.+.|+++|++++...
T Consensus       187 D~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~  222 (312)
T 3vc1_A          187 TASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITG  222 (312)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence            99987532    1    3778899999999998753

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.83  E-value=0.0047  Score=50.89  Aligned_cols=73  Identities=23%  Similarity=0.410  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCC-cccccC-------CCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTK-ENIEDL-------PEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~-~~~~~~-------~~~  214 (284)
                      .+++++|+|++|++|.+.++..... |++|+++++++++.+.+.    +.+.. ..+  |-.+ +.+...       .++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAE-GAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999988888874 999999999887765442    22432 222  2211 111111       247


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++|+++|
T Consensus        85 id~lv~nAg   93 (247)
T 2jah_A           85 LDILVNNAG   93 (247)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.83  E-value=0.0044  Score=52.09  Aligned_cols=74  Identities=22%  Similarity=0.399  Sum_probs=50.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCC-cEEeeCC--C-cccccC-------CC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGA-DLAIDYT--K-ENIEDL-------PE  213 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~-~~~~~~~--~-~~~~~~-------~~  213 (284)
                      -.++++||+|+++++|.+.++..... |++|+++++++++.+.+.    +.+. ...+.-+  + +.....       .+
T Consensus        30 l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           30 LSGKRALITGASTGIGKKVALAYAEA-GAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG  108 (276)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999988888774 999999999888765543    2332 2222221  1 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus       109 ~iD~lvnnAg  118 (276)
T 3r1i_A          109 GIDIAVCNAG  118 (276)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.83  E-value=0.0031  Score=52.35  Aligned_cols=74  Identities=19%  Similarity=0.398  Sum_probs=51.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-Hc---CCc-EEe--eCCC-cccccC-------CC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL---GAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~---g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      ..++++||+|+++++|.+.++.+... |++|+++++++++.+.+. ++   +.. ..+  |-.+ +.....       .+
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKE-GARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999988888774 999999999988876654 22   222 222  2111 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++++++|
T Consensus        83 ~id~lv~nAg   92 (257)
T 3imf_A           83 RIDILINNAA   92 (257)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.82  E-value=0.0018  Score=52.97  Aligned_cols=74  Identities=18%  Similarity=0.292  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCC--eEEEEeCChhhHHHHHHcCCcEE-eeCC-CcccccCCCcccEEEeCCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLGADLA-IDYT-KENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~--~vi~~~~~~~~~~~~~~~g~~~~-~~~~-~~~~~~~~~~~d~vid~~g~  224 (284)
                      .+++++|+|++|.+|...++.+... |.  +|+++++++++.+....-+...+ .|.. .+.+...-+++|++|+++|.
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~-G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~   94 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT   94 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHH-TCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcC-CCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCc
Confidence            4679999999999999998888774 88  99999987765432211111111 1221 22333444589999999984

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.82  E-value=0.003  Score=53.61  Aligned_cols=43  Identities=28%  Similarity=0.461  Sum_probs=36.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      ..++++||+|++|++|.+.++.+... |++|+++++++++.+.+
T Consensus        39 l~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~   81 (293)
T 3rih_A           39 LSARSVLVTGGTKGIGRGIATVFARA-GANVAVAARSPRELSSV   81 (293)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            36789999999999999988888774 99999999988876655

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.80  E-value=0.005  Score=51.14  Aligned_cols=73  Identities=23%  Similarity=0.405  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-Hc----CCc-EEe--eCCC-cccccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL----GAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~----g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      .++++||+|++|++|.+.++.+... |++|+++++++++.+.+. ++    +.. ..+  |-.+ +.+...       .+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKE-GAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999998888874 999999999887765442 22    422 222  2221 111111       23


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        85 ~id~lv~~Ag   94 (263)
T 3ai3_A           85 GADILVNNAG   94 (263)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.80  E-value=0.0049  Score=51.35  Aligned_cols=42  Identities=21%  Similarity=0.324  Sum_probs=36.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   53 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAE-GAKLSLVDVSSEGLEAS   53 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5789999999999999988888874 99999999988776544

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.80  E-value=0.0055  Score=49.91  Aligned_cols=72  Identities=22%  Similarity=0.376  Sum_probs=49.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-----HcCCc-EEe--eCCC-cccccC-------CCc
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-----SLGAD-LAI--DYTK-ENIEDL-------PEK  214 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-----~~g~~-~~~--~~~~-~~~~~~-------~~~  214 (284)
                      +++++|+|++|++|.+.++..... |++|++++++.++.+.+.     ..+.. ..+  |-.+ +.....       .++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARD-GYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            678999999999999988888874 999999999988765542     23322 222  2211 111111       237


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++|+++|
T Consensus        81 id~li~~Ag   89 (235)
T 3l77_A           81 VDVVVANAG   89 (235)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.80  E-value=0.0063  Score=51.04  Aligned_cols=73  Identities=22%  Similarity=0.304  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCc-EEe--eCCC-cccccC-------CCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD-LAI--DYTK-ENIEDL-------PEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~-~~~--~~~~-~~~~~~-------~~~  214 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+    ++.+.. ..+  |-.+ +.+...       .++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKE-GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999998888874 99999999988776543    223432 222  2211 111111       347


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++|+++|
T Consensus       100 iD~lv~~Ag  108 (277)
T 2rhc_B          100 VDVLVNNAG  108 (277)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.79  E-value=0.004  Score=52.41  Aligned_cols=73  Identities=23%  Similarity=0.404  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEe--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAI--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .++++||+|+++++|.+.++..... |++|+++++++++.+.+. +++.. ..+  |-.+ +.....       .+++|+
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAE-GARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4789999999999999988888874 999999999988876664 44432 222  2111 111111       247999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +++++|
T Consensus        83 lvnnAg   88 (281)
T 3zv4_A           83 LIPNAG   88 (281)
T ss_dssp             EECCCC
T ss_pred             EEECCC
Confidence            999987

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.79  E-value=0.0032  Score=51.95  Aligned_cols=73  Identities=25%  Similarity=0.404  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcE-Ee--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AI--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .+++++|+|+++++|.+.++..... |++|+++++++++.+.+ ++++... .+  |-.+ +.....       .+++|+
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAAD-GATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            5789999999999999999888874 99999999998877655 3455332 22  1111 111111       247999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +++++|
T Consensus        84 lv~nAg   89 (247)
T 3rwb_A           84 LVNNAS   89 (247)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999988

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.79  E-value=0.0043  Score=51.16  Aligned_cols=73  Identities=18%  Similarity=0.296  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEeeCC--C-cccccC-------CCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAIDYT--K-ENIEDL-------PEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~~~~--~-~~~~~~-------~~~  214 (284)
                      .++++||+|+++++|.+.++..... |++|+++++++++.+.+.    +.+.. ..+.-+  + +.....       .++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALARE-GAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999988888874 999999999888766553    22322 122211  1 111111       247


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++|+++|
T Consensus        87 id~li~~Ag   95 (253)
T 3qiv_A           87 IDYLVNNAA   95 (253)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999986

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.77  E-value=0.0053  Score=50.75  Aligned_cols=43  Identities=23%  Similarity=0.320  Sum_probs=36.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      -.+++++|+|+++++|.+.++..... |++|+++++++++.+.+
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~   52 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARY-GATVILLGRNEEKLRQV   52 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            46789999999999999988887774 99999999998876554

>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*

Probab=96.77  E-value=0.0072  Score=49.41  Aligned_cols=98  Identities=15%  Similarity=0.263  Sum_probs=66.8

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CCc--EEeeCCCcccccCCCcc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD--LAIDYTKENIEDLPEKF  215 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~~--~~~~~~~~~~~~~~~~~  215 (284)
                      .+...+++++.+||-+| +|. |..+..+++.  +.+++.++.+++..+.+++.    +..  .++..+...++...+.+
T Consensus        13 ~~~~~~~~~~~~vLDiG-cG~-G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~f   88 (239)
T 1xxl_A           13 MIKTAECRAEHRVLDIG-AGA-GHTALAFSPY--VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSF   88 (239)
T ss_dssp             HHHHHTCCTTCEEEEES-CTT-SHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCE
T ss_pred             HHHHhCcCCCCEEEEEc-cCc-CHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcE
Confidence            34567889999999999 444 7777777775  56999999999888777542    321  22322222222224679


Q ss_pred             cEEEeCCC-----C----cHHHHHhhccCCEEEEEcC
Q 023273          216 DVVFDAVG-----Q----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       216 d~vid~~g-----~----~~~~~~~l~~~G~~v~~g~  243 (284)
                      |+|+....     +    +..+.+.|+++|++++...
T Consensus        89 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  125 (239)
T 1xxl_A           89 DIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH  125 (239)
T ss_dssp             EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence            99987633     2    2678889999999998743

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.77  E-value=0.0037  Score=52.42  Aligned_cols=74  Identities=26%  Similarity=0.388  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCC-cEEe--eCCC-cccccC-------CCccc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGA-DLAI--DYTK-ENIEDL-------PEKFD  216 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~-~~~~--~~~~-~~~~~~-------~~~~d  216 (284)
                      ..++++||+|+++++|.+.++..... |++|+++++++++.+.+. +++. ...+  |-.+ +.....       .+++|
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  104 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGA-GYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD  104 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            46789999999999999988888774 999999999988776553 4442 2222  2211 111111       24799


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      ++++++|
T Consensus       105 ~lVnnAg  111 (272)
T 4dyv_A          105 VLFNNAG  111 (272)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.77  E-value=0.0052  Score=52.32  Aligned_cols=74  Identities=27%  Similarity=0.393  Sum_probs=51.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCC-cccccC-------CC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      -.++++||+|++|++|.+.++.+... |++|+++++++++.+.+.    +.+.. ..+  |-.+ +.+...       .+
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARR-GARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            46889999999999999988888774 999999999988776553    23322 222  2211 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus       108 ~id~lvnnAg  117 (301)
T 3tjr_A          108 GVDVVFSNAG  117 (301)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.76  E-value=0.0042  Score=51.79  Aligned_cols=73  Identities=32%  Similarity=0.444  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEe--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAI--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+. ++... ..+  |-.+ +.+...       .+.+|+
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFARE-GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            5789999999999999988888874 999999999988776654 34322 122  2211 111111       246899


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|+++|
T Consensus        84 lvnnAg   89 (263)
T 2a4k_A           84 VAHFAG   89 (263)
T ss_dssp             EEEGGG
T ss_pred             EEECCC
Confidence            999987

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.76  E-value=0.0059  Score=50.11  Aligned_cols=73  Identities=23%  Similarity=0.362  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCC-ccccc-------CCCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTK-ENIED-------LPEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~-~~~~~-------~~~~  214 (284)
                      .+++++|+|++|++|.+.++..... |++|+++++++++.+.+.    +.+.. ..+  |-.+ +....       ..+.
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASK-GATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999988888774 999999999887765543    33432 222  2111 11111       1347


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++|+++|
T Consensus        83 id~li~~Ag   91 (247)
T 3lyl_A           83 IDILVNNAG   91 (247)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.76  E-value=0.0063  Score=50.63  Aligned_cols=74  Identities=22%  Similarity=0.320  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCC-ccccc-------CCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTK-ENIED-------LPE  213 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~-~~~~~-------~~~  213 (284)
                      -.++++||+|+++++|.+.++..... |++|+++++++++.+.+.    +.+.. ..+  |-.+ +....       ..+
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQ-GADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999988888774 999999999888765543    23322 222  2221 11111       135


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        88 ~id~lv~nAg   97 (264)
T 3ucx_A           88 RVDVVINNAF   97 (264)
T ss_dssp             CCSEEEECCC
T ss_pred             CCcEEEECCC
Confidence            7999999986

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=96.76  E-value=0.0055  Score=50.71  Aligned_cols=94  Identities=19%  Similarity=0.308  Sum_probs=64.5

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CCc--EEeeCCCcccccCCCcccE
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD--LAIDYTKENIEDLPEKFDV  217 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~~--~~~~~~~~~~~~~~~~~d~  217 (284)
                      ......++.+||-+| +| .|..+..+++.  +.+++.++.+++.++.+++.    +..  .++..+...++-..+.+|+
T Consensus        31 ~~l~~~~~~~vLDiG-cG-~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~  106 (260)
T 1vl5_A           31 QIAALKGNEEVLDVA-TG-GGHVANAFAPF--VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHI  106 (260)
T ss_dssp             HHHTCCSCCEEEEET-CT-TCHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEE
T ss_pred             HHhCCCCCCEEEEEe-CC-CCHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEE
Confidence            345667899999999 44 67788888776  45999999999988777542    321  2222222222222367999


Q ss_pred             EEeCCC-----C----cHHHHHhhccCCEEEEE
Q 023273          218 VFDAVG-----Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       218 vid~~g-----~----~~~~~~~l~~~G~~v~~  241 (284)
                      |+.+..     +    +..+.+.|+++|++++.
T Consensus       107 V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~  139 (260)
T 1vl5_A          107 VTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLV  139 (260)
T ss_dssp             EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence            997643     2    26788999999999986

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=96.75  E-value=0.0089  Score=49.65  Aligned_cols=93  Identities=17%  Similarity=0.220  Sum_probs=65.6

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC---cEEeeCCCcccccCCCcccEEE
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA---DLAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      .+.++.+||-+| +| .|..+..+++. ++.+++.++.+++..+.+++    .+.   ..++..+...+....+.+|+|+
T Consensus        43 ~~~~~~~vLDiG-cG-~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~  119 (267)
T 3kkz_A           43 NLTEKSLIADIG-CG-TGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIW  119 (267)
T ss_dssp             CCCTTCEEEEET-CT-TCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEE
T ss_pred             cCCCCCEEEEeC-CC-CCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEE
Confidence            478999999999 44 58888889887 57899999999998877754    232   2233322222222246799998


Q ss_pred             eCCC----C----cHHHHHhhccCCEEEEEc
Q 023273          220 DAVG----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       220 d~~g----~----~~~~~~~l~~~G~~v~~g  242 (284)
                      ....    +    +..+.+.|+++|++++..
T Consensus       120 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  150 (267)
T 3kkz_A          120 SEGAIYNIGFERGLNEWRKYLKKGGYLAVSE  150 (267)
T ss_dssp             ESSCGGGTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             EcCCceecCHHHHHHHHHHHcCCCCEEEEEE
Confidence            6533    2    367888999999998764

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.75  E-value=0.0033  Score=52.53  Aligned_cols=73  Identities=23%  Similarity=0.414  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcE-Ee--eCCC-cccccC-------CCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AI--DYTK-ENIEDL-------PEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-~~--~~~~-~~~~~~-------~~~  214 (284)
                      .++++||+|++|++|.+.++.+... |++|+++++++++.+.+.    +.+... .+  |-.+ +.....       .++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVA-GAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999988888774 999999999988765543    234321 12  2211 111111       247


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++++++|
T Consensus        82 iD~lVnnAG   90 (264)
T 3tfo_A           82 IDVLVNNAG   90 (264)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.75  E-value=0.0048  Score=51.89  Aligned_cols=74  Identities=22%  Similarity=0.382  Sum_probs=51.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEe--eCCC-cccccC-------CCccc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAI--DYTK-ENIEDL-------PEKFD  216 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~--~~~~-~~~~~~-------~~~~d  216 (284)
                      ..++++||+|++|++|.+.++..... |++|+++++++++.+.+. +++.. ..+  |-.+ +.....       .+++|
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  103 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKN-GAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVD  103 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            35789999999999999988888774 999999999988776553 44432 222  2111 111111       24799


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      ++|+++|
T Consensus       104 ~lv~nAg  110 (277)
T 4dqx_A          104 VLVNNAG  110 (277)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.75  E-value=0.005  Score=51.92  Aligned_cols=74  Identities=18%  Similarity=0.344  Sum_probs=50.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-Hc---CCc-EEe--eCCCc-ccccC-------CC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL---GAD-LAI--DYTKE-NIEDL-------PE  213 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~---g~~-~~~--~~~~~-~~~~~-------~~  213 (284)
                      ..++++||+|+++++|.+.++..... |++|++++++.++.+.+. ++   +.. ..+  |-.+. .....       .+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAAD-GVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFG  104 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999988887774 999999999888766553 22   222 222  21111 11111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++++++|
T Consensus       105 ~iD~lVnnAg  114 (283)
T 3v8b_A          105 HLDIVVANAG  114 (283)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.75  E-value=0.0046  Score=50.72  Aligned_cols=43  Identities=33%  Similarity=0.394  Sum_probs=37.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      ..+++++|+|++|++|.+.++..... |++|+++++++++.+.+
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   54 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAH-GASVVLLGRTEASLAEV   54 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEecCHHHHHHH
Confidence            46789999999999999988888774 99999999998877654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.75  E-value=0.0047  Score=51.15  Aligned_cols=73  Identities=26%  Similarity=0.331  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEe--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAI--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+. +++.. ..+  |-.+ +.+...       .+++|+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAA-GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999888874 999999999888776553 44322 122  2211 111111       237999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|+++|
T Consensus        83 lv~nAg   88 (254)
T 1hdc_A           83 LVNNAG   88 (254)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=96.75  E-value=0.011  Score=49.24  Aligned_cols=96  Identities=16%  Similarity=0.204  Sum_probs=66.1

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CC---cEEeeCCCcccccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA---DLAIDYTKENIEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~---~~~~~~~~~~~~~~~~~~d  216 (284)
                      +..++.++++||-+| +| .|..+..+++.. +.+++.++.+++..+.+++.    +.   ..++..+...++...+.+|
T Consensus        55 ~~~~~~~~~~vLDiG-cG-~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD  131 (273)
T 3bus_A           55 ALLDVRSGDRVLDVG-CG-IGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFD  131 (273)
T ss_dssp             HHSCCCTTCEEEEES-CT-TSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEE
T ss_pred             HhcCCCCCCEEEEeC-CC-CCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCcc
Confidence            566788999999999 44 477888888874 89999999999887777542    32   1222222222222235799


Q ss_pred             EEEeCCC-----C----cHHHHHhhccCCEEEEEc
Q 023273          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       217 ~vid~~g-----~----~~~~~~~l~~~G~~v~~g  242 (284)
                      +|+....     +    +..+.+.|+++|++++..
T Consensus       132 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~  166 (273)
T 3bus_A          132 AVWALESLHHMPDRGRALREMARVLRPGGTVAIAD  166 (273)
T ss_dssp             EEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             EEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            9985432     2    267788999999998764

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.74  E-value=0.004  Score=52.02  Aligned_cols=74  Identities=26%  Similarity=0.441  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcE-EeeCC--C-cccccC-------CCccc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AIDYT--K-ENIEDL-------PEKFD  216 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~~~~--~-~~~~~~-------~~~~d  216 (284)
                      -.++++||+|++|++|.+.++..... |++|+++++++++.+.+ ++++... .+..+  + +.....       .+++|
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  103 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQ-GAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID  103 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            36789999999999999988888774 99999999988877655 4455332 22211  1 111111       24799


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      ++++++|
T Consensus       104 ~lvnnAg  110 (266)
T 3grp_A          104 ILVNNAG  110 (266)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=96.74  E-value=0.01  Score=51.25  Aligned_cols=100  Identities=20%  Similarity=0.173  Sum_probs=65.6

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHHcC-----------------CcEEeeC
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLG-----------------ADLAIDY  203 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~g-----------------~~~~~~~  203 (284)
                      .+....+.++++||-+| +|. |..++.+++..+. .+++.++.+++..+.+++..                 ...++..
T Consensus        97 ~l~~l~~~~g~~VLDiG-~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~  174 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAG-SGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK  174 (336)
T ss_dssp             HHHHHTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred             HHHhcCCCCCCEEEEeC-CCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence            34556789999999999 555 8888888887422 78999999998887775421                 1122222


Q ss_pred             CCcccc-cC-CCcccEEEeCCCC----cHHHHHhhccCCEEEEEcC
Q 023273          204 TKENIE-DL-PEKFDVVFDAVGQ----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       204 ~~~~~~-~~-~~~~d~vid~~g~----~~~~~~~l~~~G~~v~~g~  243 (284)
                      +..... .. .+.+|+|+.....    ...+.++|+++|++++...
T Consensus       175 d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          175 DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             ChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            211111 11 2469998865543    3778899999999997653

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.74  E-value=0.0067  Score=50.30  Aligned_cols=42  Identities=24%  Similarity=0.290  Sum_probs=35.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   47 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARN-GARLLLFSRNREKLEAA   47 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5789999999999999988888874 99999999988776544

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.74  E-value=0.0083  Score=51.45  Aligned_cols=75  Identities=19%  Similarity=0.171  Sum_probs=52.4

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc-----CC-cEEe---eCC-CcccccCCCcccE
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-----GA-DLAI---DYT-KENIEDLPEKFDV  217 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~-----g~-~~~~---~~~-~~~~~~~~~~~d~  217 (284)
                      ...+.+|||+|++|.+|...+..+... |.+|++++++.++.+.+.+.     +. ..++   |-. .+.+.+.-+++|+
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   86 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEH-GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence            346789999999999999999888874 99999999987766544321     21 1222   222 2233444458999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      ||.+++
T Consensus        87 vih~A~   92 (342)
T 1y1p_A           87 VAHIAS   92 (342)
T ss_dssp             EEECCC
T ss_pred             EEEeCC
Confidence            999987

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.74  E-value=0.0052  Score=50.91  Aligned_cols=73  Identities=25%  Similarity=0.409  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEe--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAI--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .+++++|+|+++++|.+.++.+... |++|+++++++++.+.+. +++.. ..+  |-.+ +.....       .+.+|+
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKG-GAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4789999999999999988888874 999999999988876654 44432 222  2111 111111       237999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|+++|
T Consensus        87 li~~Ag   92 (261)
T 3n74_A           87 LVNNAG   92 (261)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.73  E-value=0.0034  Score=52.30  Aligned_cols=73  Identities=19%  Similarity=0.192  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH-HHHHHcCCcEE-eeCCCc-cccc-------CCCcccEEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-DLLRSLGADLA-IDYTKE-NIED-------LPEKFDVVF  219 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~-~~~~~~g~~~~-~~~~~~-~~~~-------~~~~~d~vi  219 (284)
                      .++++||+|++|++|.+.++.+... |++|+++++++++. +.+++.+...+ .|-.+. ....       ..+++|+++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv  104 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEH-GHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVV  104 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            4688999999999999988887774 99999999977654 33445553221 122211 1111       135799999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +++|
T Consensus       105 ~nAg  108 (260)
T 3gem_A          105 HNAS  108 (260)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.73  E-value=0.0064  Score=50.47  Aligned_cols=73  Identities=23%  Similarity=0.433  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCC-cEEe--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGA-DLAI--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~-~~~~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .++++||+|++|++|.+.++.+... |++|+++++++++.+.+. ++.. ...+  |-.+ +.+...       .+++|+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKA-GATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988888874 999999999888776554 3321 1222  2211 111111       237999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|+++|
T Consensus        90 lv~~Ag   95 (263)
T 3ak4_A           90 LCANAG   95 (263)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.73  E-value=0.0052  Score=50.93  Aligned_cols=73  Identities=19%  Similarity=0.341  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEeeCC--C-cccccC-------CCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAIDYT--K-ENIEDL-------PEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~~~~--~-~~~~~~-------~~~  214 (284)
                      .++++||+|+++++|.+.++..... |++|+++++++++.+.+.    +.+.. ..+..+  + +.....       .++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKA-GASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999988887774 999999999887765542    33432 222211  1 111111       247


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++++++|
T Consensus        90 id~lv~nAg   98 (256)
T 3gaf_A           90 ITVLVNNAG   98 (256)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.73  E-value=0.0012  Score=54.51  Aligned_cols=94  Identities=23%  Similarity=0.371  Sum_probs=62.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc-EEeeCCC-ccccc---CCCcccEEEeCCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTK-ENIED---LPEKFDVVFDAVG  223 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~-~~~~~~~-~~~~~---~~~~~d~vid~~g  223 (284)
                      -.|+++||+|+++++|++.++..... |++|+++++++++.+..+.-... ...|-.+ +..++   .-+++|++++++|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~-Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAG   87 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAEL-GAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAG   87 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            36999999999999999988888874 99999999988776532211111 1112111 11111   1457999999988


Q ss_pred             C--c------------------------HHHHHhhc-cCCEEEEEcC
Q 023273          224 Q--C------------------------DKALKAVK-EGGRVVSIIG  243 (284)
Q Consensus       224 ~--~------------------------~~~~~~l~-~~G~~v~~g~  243 (284)
                      -  +                        +.++..|+ ++|+||.++.
T Consensus        88 i~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS  134 (242)
T 4b79_A           88 ISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIAS  134 (242)
T ss_dssp             CCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECC
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEee
Confidence            2  0                        23555564 4799998854

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.72  E-value=0.0061  Score=51.48  Aligned_cols=74  Identities=18%  Similarity=0.318  Sum_probs=51.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEe--eCCC-cccccC---CCcccEEEe
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAI--DYTK-ENIEDL---PEKFDVVFD  220 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~--~~~~-~~~~~~---~~~~d~vid  220 (284)
                      ..|++++|+|++|++|.+.++.+... |++|+++++++++.+.+. +++.. ..+  |-.+ +.+.+.   -+++|++|+
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~   92 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARR-GATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLIN   92 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence            46789999999999999988888774 999999999988877664 34322 122  2111 111111   247899999


Q ss_pred             CCC
Q 023273          221 AVG  223 (284)
Q Consensus       221 ~~g  223 (284)
                      ++|
T Consensus        93 nAg   95 (291)
T 3rd5_A           93 NAG   95 (291)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            987

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.72  E-value=0.0089  Score=50.64  Aligned_cols=94  Identities=16%  Similarity=0.264  Sum_probs=60.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh--hhHHHH----HHcCCcE-Ee--eCCC-cccccC-------C
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST--AKLDLL----RSLGADL-AI--DYTK-ENIEDL-------P  212 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~--~~~~~~----~~~g~~~-~~--~~~~-~~~~~~-------~  212 (284)
                      .++++||+|+++++|.+.++..... |++|+++.++.  ++.+.+    ++.+... .+  |-.+ +.....       .
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYARE-GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999988887774 99999988752  233222    3344332 22  1111 111111       2


Q ss_pred             CcccEEEeCCCC---c--------------------------HHHHHhhccCCEEEEEcCC
Q 023273          213 EKFDVVFDAVGQ---C--------------------------DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       213 ~~~d~vid~~g~---~--------------------------~~~~~~l~~~G~~v~~g~~  244 (284)
                      +++|++++++|.   .                          +.++..++++|++|.++..
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~  187 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI  187 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence            479999999872   0                          1345566778999988643

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.72  E-value=0.0059  Score=49.97  Aligned_cols=69  Identities=25%  Similarity=0.399  Sum_probs=48.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe--eCCCcccccC-------CCcccEEEeC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTKENIEDL-------PEKFDVVFDA  221 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~-------~~~~d~vid~  221 (284)
                      +++++|+|++|++|.+.++.+... |++|+++++++++  ..++++. ..+  |-.++.....       .+++|+++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~-G~~V~~~~r~~~~--~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~   77 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVAR-GYRVAIASRNPEE--AAQSLGA-VPLPTDLEKDDPKGLVKRALEALGGLHVLVHA   77 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHH--HHHHHTC-EEEECCTTTSCHHHHHHHHHHHHTSCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHH--HHHhhCc-EEEecCCchHHHHHHHHHHHHHcCCCCEEEEC
Confidence            578999999999999999888874 9999999998776  2334442 222  2222221111       2479999999


Q ss_pred             CC
Q 023273          222 VG  223 (284)
Q Consensus       222 ~g  223 (284)
                      +|
T Consensus        78 Ag   79 (239)
T 2ekp_A           78 AA   79 (239)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.71  E-value=0.0034  Score=51.42  Aligned_cols=73  Identities=19%  Similarity=0.265  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEe--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAI--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .++++||+|+++++|.+.++.+... |++|+++++++++.+.+. +++.. ..+  |-.+ +.....       .+.+|+
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVER-GHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            3678999999999999988887774 999999999988876654 33321 112  2111 111111       247999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +++++|
T Consensus        81 lvnnAg   86 (235)
T 3l6e_A           81 VLHCAG   86 (235)
T ss_dssp             EEEECC
T ss_pred             EEECCC
Confidence            999987

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.71  E-value=0.0058  Score=51.30  Aligned_cols=73  Identities=27%  Similarity=0.423  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-Hc---CCcEEe--eCCC-ccccc-------CCCcc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL---GADLAI--DYTK-ENIED-------LPEKF  215 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~---g~~~~~--~~~~-~~~~~-------~~~~~  215 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+. ++   +....+  |-.+ +.+..       ..+++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEA-GARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999998888874 999999999887765442 32   211122  2111 11111       13479


Q ss_pred             cEEEeCCC
Q 023273          216 DVVFDAVG  223 (284)
Q Consensus       216 d~vid~~g  223 (284)
                      |++|+++|
T Consensus       107 D~lvnnAg  114 (276)
T 2b4q_A          107 DILVNNAG  114 (276)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.71  E-value=0.0045  Score=51.24  Aligned_cols=73  Identities=19%  Similarity=0.289  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCC-cccccC------CCcc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTK-ENIEDL------PEKF  215 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~-~~~~~~------~~~~  215 (284)
                      .++++||+|+++++|.+.++..... |++|+++++++++.+.+.    +.+.. ..+  |-.+ +.....      .+++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i   84 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAE-GFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL   84 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence            5789999999999999988888874 999999999888765543    23432 122  2111 111111      1579


Q ss_pred             cEEEeCCC
Q 023273          216 DVVFDAVG  223 (284)
Q Consensus       216 d~vid~~g  223 (284)
                      |++++++|
T Consensus        85 d~lv~nAg   92 (252)
T 3h7a_A           85 EVTIFNVG   92 (252)
T ss_dssp             EEEEECCC
T ss_pred             eEEEECCC
Confidence            99999988

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=96.71  E-value=0.0082  Score=49.42  Aligned_cols=99  Identities=12%  Similarity=0.057  Sum_probs=69.2

Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-cEEeeCCCcccccCCCcccEEE
Q 023273          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       141 ~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      ..+......++.+||-+| +| .|..+..+++...+.+++.++.+++..+.+++... ..++..+...+. ..+.+|+|+
T Consensus        24 ~l~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~  100 (259)
T 2p35_A           24 DLLAQVPLERVLNGYDLG-CG-PGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLY  100 (259)
T ss_dssp             HHHTTCCCSCCSSEEEET-CT-TTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEE
T ss_pred             HHHHhcCCCCCCEEEEec-Cc-CCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEE
Confidence            344556678899999999 44 67777788876447899999999999888876432 233333322333 346799998


Q ss_pred             eCCC-----C----cHHHHHhhccCCEEEEEc
Q 023273          220 DAVG-----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       220 d~~g-----~----~~~~~~~l~~~G~~v~~g  242 (284)
                      .+..     +    +..+.+.|+++|++++..
T Consensus       101 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  132 (259)
T 2p35_A          101 ANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM  132 (259)
T ss_dssp             EESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             EeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence            7643     2    256778999999998764

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.70  E-value=0.0056  Score=49.75  Aligned_cols=72  Identities=15%  Similarity=0.255  Sum_probs=49.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEeeCC--C-cccccC-------CCcccEEE
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYT--K-ENIEDL-------PEKFDVVF  219 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~--~-~~~~~~-------~~~~d~vi  219 (284)
                      +++++|+|++|++|...++.+... |++|+++++++++.+.+. ++.....+..+  + +.+.+.       .+++|++|
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAK-GYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            568999999999999998888874 999999999888776553 34322232221  1 111111       24789999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +++|
T Consensus        84 ~~Ag   87 (234)
T 2ehd_A           84 NNAG   87 (234)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.70  E-value=0.0025  Score=51.48  Aligned_cols=90  Identities=19%  Similarity=0.250  Sum_probs=59.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCC---CcccccCCCcccEEEeCCCCc---
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYT---KENIEDLPEKFDVVFDAVGQC---  225 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~d~vid~~g~~---  225 (284)
                      .+|+|+||+|.+|...++.+... |.+|+++++++++...+.  ....++.-+   .+.+.+.-+++|+||.++|..   
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~   81 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNR-GFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNN   81 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTT-TCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC----
T ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCC
Confidence            58999999999999999998884 899999999877654221  111222211   112223345799999998731   


Q ss_pred             -----------HHHHHhhccC--CEEEEEcCC
Q 023273          226 -----------DKALKAVKEG--GRVVSIIGS  244 (284)
Q Consensus       226 -----------~~~~~~l~~~--G~~v~~g~~  244 (284)
                                 ..+++.++..  +++|.++..
T Consensus        82 ~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           82 PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             --CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence                       2345555543  489888653

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.67  E-value=0.0069  Score=49.89  Aligned_cols=73  Identities=23%  Similarity=0.439  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh-hhHH-HHHHcCCc-EEe--eCCC-cccccC-------CCccc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLD-LLRSLGAD-LAI--DYTK-ENIEDL-------PEKFD  216 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~~-~~~~~g~~-~~~--~~~~-~~~~~~-------~~~~d  216 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++ ++.+ .+++.+.. ..+  |-.+ +.+...       .+++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVE-GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999988888874 99999999977 6554 34455532 222  2211 111111       24799


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      ++|+++|
T Consensus        85 ~lv~nAg   91 (249)
T 2ew8_A           85 ILVNNAG   91 (249)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.66  E-value=0.0048  Score=51.75  Aligned_cols=73  Identities=26%  Similarity=0.374  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEeeCC--C-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAIDYT--K-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~~~~--~-~~~~~~-------~~~~d~  217 (284)
                      .++++||+|++|++|.+.++.+... |++|+++++++++.+.+. +++.. ..+..+  + +.+...       .+++|+
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAA-GDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            4689999999999999988888874 999999999988876654 44422 222211  1 111111       247999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|+++|
T Consensus        83 lv~~Ag   88 (281)
T 3m1a_A           83 LVNNAG   88 (281)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.66  E-value=0.0045  Score=52.16  Aligned_cols=43  Identities=33%  Similarity=0.387  Sum_probs=35.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      ..|+++||+|++|++|.+.++.+... |++|+++++++++.+.+
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~   73 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAE-GYSVVITGRRPDVLDAA   73 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            36889999999999999988888774 99999999998876554

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.66  E-value=0.0091  Score=49.86  Aligned_cols=74  Identities=19%  Similarity=0.302  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCC-cccccC-------CC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      ..+++++|+|++|++|.+.++.+... |++|+++++++++.+.+.    +.+.. .++  |-.+ +.+...       .+
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  107 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKL-KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG  107 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            35789999999999999999888874 999999999887665442    23432 222  2211 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus       108 ~iD~li~~Ag  117 (272)
T 1yb1_A          108 DVSILVNNAG  117 (272)
T ss_dssp             CCSEEEECCC
T ss_pred             CCcEEEECCC
Confidence            7999999987

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=96.66  E-value=0.016  Score=43.13  Aligned_cols=72  Identities=25%  Similarity=0.308  Sum_probs=54.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe-eCCCc-ccccC-CCcccEEEeCCCC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKE-NIEDL-PEKFDVVFDAVGQ  224 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~-~~~~~-~~~~d~vid~~g~  224 (284)
                      .++++|+| .|.+|...++.+... |.+|+++++++++.+.+++.+...+. |..+. .+... .+++|++|.++++
T Consensus         6 ~~~v~I~G-~G~iG~~la~~L~~~-g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~   80 (141)
T 3llv_A            6 RYEYIVIG-SEAAGVGLVRELTAA-GKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSD   80 (141)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCC
Confidence            46899999 699999999998885 99999999999999988887754332 22221 12222 3579999999986

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.66  E-value=0.0049  Score=51.83  Aligned_cols=73  Identities=25%  Similarity=0.337  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCc-EEe--eCCCc-ccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAI--DYTKE-NIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~--~~~~~-~~~~~-------~~~~d~  217 (284)
                      .++++||+|+++++|.+.++..... |++|+++++++++.+.+ ++++.. ..+  |-.+. .....       .+++|+
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADE-GCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988887774 99999999998877655 344422 222  22111 11111       247999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +++++|
T Consensus       107 lvnnAg  112 (277)
T 3gvc_A          107 LVANAG  112 (277)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.66  E-value=0.0095  Score=49.81  Aligned_cols=73  Identities=22%  Similarity=0.381  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCC-cccccC-------C-C
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTK-ENIEDL-------P-E  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~-~~~~~~-------~-~  213 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+.    +.+.. ..+  |-.+ +.....       . +
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGL-GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999998888874 999999999887765442    23432 122  2211 111111       2 6


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++++++|
T Consensus        99 ~id~lv~nAg  108 (273)
T 1ae1_A           99 KLNILVNNAG  108 (273)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCC
Confidence            7999999987

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=96.65  E-value=0.014  Score=49.31  Aligned_cols=93  Identities=15%  Similarity=0.100  Sum_probs=65.0

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC---cEEeeCCCcccccCCCcccEEE
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA---DLAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      .+.++.+||-+| +| .|..+..+++.. +.+++.++.+++.++.+++    .+.   ..++..+...++-..+.+|+|+
T Consensus        79 ~~~~~~~vLDiG-cG-~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~  155 (297)
T 2o57_A           79 VLQRQAKGLDLG-AG-YGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIW  155 (297)
T ss_dssp             CCCTTCEEEEET-CT-TSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEE
T ss_pred             CCCCCCEEEEeC-CC-CCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEE
Confidence            778999999999 44 688888888875 8899999999988777754    232   1222222222222235799998


Q ss_pred             eCCC-----C----cHHHHHhhccCCEEEEEc
Q 023273          220 DAVG-----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       220 d~~g-----~----~~~~~~~l~~~G~~v~~g  242 (284)
                      ....     .    +..+.+.|+++|++++..
T Consensus       156 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~  187 (297)
T 2o57_A          156 SQDAFLHSPDKLKVFQECARVLKPRGVMAITD  187 (297)
T ss_dssp             EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ecchhhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            6533     2    367889999999999874

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.65  E-value=0.0047  Score=53.07  Aligned_cols=73  Identities=22%  Similarity=0.379  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCC--c-EEe--eCCC-cccccC-------C
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGA--D-LAI--DYTK-ENIEDL-------P  212 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~--~-~~~--~~~~-~~~~~~-------~  212 (284)
                      .++++||+|++|++|.+.++.+... |++|+++++++++.+.+.    ..+.  . .++  |-.+ +.+...       .
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~-G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQ-GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF   85 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            5789999999999999988888874 999999999988766543    2232  1 222  2211 111111       3


Q ss_pred             CcccEEEeCCC
Q 023273          213 EKFDVVFDAVG  223 (284)
Q Consensus       213 ~~~d~vid~~g  223 (284)
                      +++|++|+++|
T Consensus        86 g~id~lv~nAg   96 (319)
T 3ioy_A           86 GPVSILCNNAG   96 (319)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            57899999988

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.65  E-value=0.0082  Score=49.63  Aligned_cols=72  Identities=22%  Similarity=0.332  Sum_probs=49.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCC-cccccC-------CCcc
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTK-ENIEDL-------PEKF  215 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~-~~~~~~-------~~~~  215 (284)
                      +++++|+|++|++|.+.++.+... |++|+++++++++.+.+.    +.+.. ..+  |-.+ +.+...       .+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKD-GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            468999999999999998888874 999999999887665442    22322 222  2221 111111       2479


Q ss_pred             cEEEeCCC
Q 023273          216 DVVFDAVG  223 (284)
Q Consensus       216 d~vid~~g  223 (284)
                      |++|+++|
T Consensus        81 d~lv~nAg   88 (256)
T 1geg_A           81 DVIVNNAG   88 (256)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.65  E-value=0.0071  Score=50.20  Aligned_cols=73  Identities=18%  Similarity=0.234  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCC--cEEe--eCCC-ccccc-------C
Q 023273          150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGA--DLAI--DYTK-ENIED-------L  211 (284)
Q Consensus       150 ~g~~vlI~ga~g--~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~--~~~~--~~~~-~~~~~-------~  211 (284)
                      .|+++||+|++|  ++|++.++..... |++|+++.+++++.+.+.    +.+.  ...+  |-.+ +....       .
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~-Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQL-GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            688999999776  8999988877774 999999999887765553    3332  1222  2211 11111       1


Q ss_pred             CCcccEEEeCCC
Q 023273          212 PEKFDVVFDAVG  223 (284)
Q Consensus       212 ~~~~d~vid~~g  223 (284)
                      -+.+|++++++|
T Consensus        84 ~G~iD~lvnnAg   95 (256)
T 4fs3_A           84 VGNIDGVYHSIA   95 (256)
T ss_dssp             HCCCSEEEECCC
T ss_pred             hCCCCEEEeccc
Confidence            357999999877

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.65  E-value=0.0074  Score=50.37  Aligned_cols=74  Identities=30%  Similarity=0.444  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-H----cCCc-EEe--eCCC-cccccC-------C
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-S----LGAD-LAI--DYTK-ENIEDL-------P  212 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~----~g~~-~~~--~~~~-~~~~~~-------~  212 (284)
                      ..++++||+|++|++|.+.++.+... |++|+++++++++.+.+. +    .+.. ..+  |-.+ +.+...       .
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   97 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999988888874 999999999887765432 2    2432 222  2221 111111       2


Q ss_pred             CcccEEEeCCC
Q 023273          213 EKFDVVFDAVG  223 (284)
Q Consensus       213 ~~~d~vid~~g  223 (284)
                      +++|++|+++|
T Consensus        98 g~iD~lvnnAg  108 (267)
T 1vl8_A           98 GKLDTVVNAAG  108 (267)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.65  E-value=0.0066  Score=51.03  Aligned_cols=74  Identities=16%  Similarity=0.282  Sum_probs=48.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcE-Ee--eCCC-cccccC-------CC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-~~--~~~~-~~~~~~-------~~  213 (284)
                      ..++++||+|+++++|.+.++..... |++|+++++++++.+.+.    +.+... .+  |-.+ +.....       .+
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAAR-GIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            45789999999999999988887774 999999999888765542    233321 22  2111 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      .+|++|+++|
T Consensus       101 ~id~lv~nAg  110 (279)
T 3sju_A          101 PIGILVNSAG  110 (279)
T ss_dssp             SCCEEEECCC
T ss_pred             CCcEEEECCC
Confidence            7999999987

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.65  E-value=0.0098  Score=48.32  Aligned_cols=97  Identities=24%  Similarity=0.228  Sum_probs=65.1

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC--c--EEeeCCCccc---ccCCCcc
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA--D--LAIDYTKENI---EDLPEKF  215 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~--~--~~~~~~~~~~---~~~~~~~  215 (284)
                      +....++++++||-+| +|. |..+..+++..+..+++.++.+++..+.+++.-.  .  ..+..+....   ......+
T Consensus        67 l~~~~~~~~~~VLDlG-cG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~  144 (230)
T 1fbn_A           67 LKVMPIKRDSKILYLG-ASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKV  144 (230)
T ss_dssp             CCCCCCCTTCEEEEES-CCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCE
T ss_pred             ccccCCCCCCEEEEEc-ccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccE
Confidence            4455678999999999 554 8888888887423789999999998877754321  1  1222221110   1123579


Q ss_pred             cEEEeCCCC-------cHHHHHhhccCCEEEEE
Q 023273          216 DVVFDAVGQ-------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       216 d~vid~~g~-------~~~~~~~l~~~G~~v~~  241 (284)
                      |+|+.....       ...+.+.|+++|++++.
T Consensus       145 D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          145 DVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            999865443       25677899999999986

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.65  E-value=0.0044  Score=51.31  Aligned_cols=73  Identities=18%  Similarity=0.247  Sum_probs=45.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCc-EEe--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAI--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .++++||+|+++++|.+.++..... |++|+++++++++.+.. ++++.. ..+  |-.+ +.....       .+++|+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQE-GATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988888774 99999999987766544 334321 222  2111 111111       247999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +++++|
T Consensus        85 lv~nAg   90 (257)
T 3tpc_A           85 LVNCAG   90 (257)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.64  E-value=0.0064  Score=50.86  Aligned_cols=73  Identities=23%  Similarity=0.344  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCc-EEe--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAI--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .+++++|+|+++++|.+.++..... |++|+++++++++.+.+ ++++.. ..+  |-.+ +.....       .+++|+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARA-GARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988888774 99999999988877655 344432 222  2211 111111       247999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +++++|
T Consensus        89 lv~nAg   94 (271)
T 3tzq_B           89 VDNNAA   94 (271)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.64  E-value=0.0072  Score=50.36  Aligned_cols=73  Identities=18%  Similarity=0.244  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH---HHcCCc-EEe--eCCC-cccccC-------CCcc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL---RSLGAD-LAI--DYTK-ENIEDL-------PEKF  215 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~---~~~g~~-~~~--~~~~-~~~~~~-------~~~~  215 (284)
                      .|+++||+|+++++|++.++..... |++|+++++++++.+.+   ++.+.. ..+  |-.+ +.....       -+.+
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~-Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEE-RAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            5889999999999999988777774 99999999977655443   333422 222  2221 111111       3579


Q ss_pred             cEEEeCCC
Q 023273          216 DVVFDAVG  223 (284)
Q Consensus       216 d~vid~~g  223 (284)
                      |++++++|
T Consensus        85 DiLVNnAG   92 (258)
T 4gkb_A           85 DGLVNNAG   92 (258)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.64  E-value=0.0054  Score=51.85  Aligned_cols=74  Identities=24%  Similarity=0.252  Sum_probs=51.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-Hc----CCc-EEeeCCC-cccccCCCcccEEEeC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL----GAD-LAIDYTK-ENIEDLPEKFDVVFDA  221 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~----g~~-~~~~~~~-~~~~~~~~~~d~vid~  221 (284)
                      ..+++++|+|++|++|.+++..+... |++|+++.+++++.+.+. ++    +.. ...|..+ +.+.+.-+.+|+++++
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~-G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~  195 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA  195 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence            46889999999999999998888875 889999999877765442 22    211 1223222 2233334568999999


Q ss_pred             CC
Q 023273          222 VG  223 (284)
Q Consensus       222 ~g  223 (284)
                      +|
T Consensus       196 ag  197 (287)
T 1lu9_A          196 GA  197 (287)
T ss_dssp             CC
T ss_pred             CC
Confidence            97

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.63  E-value=0.0058  Score=50.27  Aligned_cols=73  Identities=25%  Similarity=0.372  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCc--EEe--eCCC-cccccC------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD--LAI--DYTK-ENIEDL------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~--~~~--~~~~-~~~~~~------~~~~d~  217 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+ ++++..  ..+  |-.+ +.+...      .+++|+
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAAS-GARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            5789999999999999998888874 99999999988876554 333322  122  2211 111111      157999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|+++|
T Consensus        89 li~~Ag   94 (254)
T 2wsb_A           89 LVNSAG   94 (254)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.62  E-value=0.0086  Score=49.62  Aligned_cols=73  Identities=25%  Similarity=0.382  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCC-cccccC-------C-C
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTK-ENIEDL-------P-E  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~-~~~~~~-------~-~  213 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+.    +.+.. ..+  |-.+ +.....       . +
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASL-GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999988888774 999999999887765432    22322 122  2211 111111       2 6


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++++++|
T Consensus        87 ~id~lv~~Ag   96 (260)
T 2ae2_A           87 KLNILVNNAG   96 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.61  E-value=0.0063  Score=50.72  Aligned_cols=74  Identities=26%  Similarity=0.447  Sum_probs=50.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-H----cCCc-EEe--eCCC-cccccC-------C
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-S----LGAD-LAI--DYTK-ENIEDL-------P  212 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~----~g~~-~~~--~~~~-~~~~~~-------~  212 (284)
                      -.++++||+|+++++|.+.++.+... |++|+++++++++.+.+. +    .+.. ..+  |-.+ +.....       .
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   96 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAA-GARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF   96 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999988888874 999999999888765542 1    3322 222  2211 111111       2


Q ss_pred             CcccEEEeCCC
Q 023273          213 EKFDVVFDAVG  223 (284)
Q Consensus       213 ~~~d~vid~~g  223 (284)
                      +++|++|+++|
T Consensus        97 g~id~lv~nAg  107 (266)
T 4egf_A           97 GGLDVLVNNAG  107 (266)
T ss_dssp             TSCSEEEEECC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.61  E-value=0.008  Score=49.90  Aligned_cols=73  Identities=23%  Similarity=0.325  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCCc-ccccC-------CCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTKE-NIEDL-------PEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~~-~~~~~-------~~~  214 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+.    +.+.. ..+  |-.+. .+...       .++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEE-GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999888874 999999999887765442    22322 222  22111 11111       247


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++|+++|
T Consensus        85 id~lv~nAg   93 (262)
T 1zem_A           85 IDFLFNNAG   93 (262)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999886

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.61  E-value=0.0098  Score=50.31  Aligned_cols=73  Identities=23%  Similarity=0.407  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-Hc----CCc-EEe--eCCC-ccccc-------CCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL----GAD-LAI--DYTK-ENIED-------LPE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~----g~~-~~~--~~~~-~~~~~-------~~~  213 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+. ++    +.. ..+  |-.+ +.+..       ..+
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSL-GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988888874 999999999887765442 21    322 222  2111 11111       134


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      .+|++|+++|
T Consensus       104 ~id~li~~Ag  113 (302)
T 1w6u_A          104 HPNIVINNAA  113 (302)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999987

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.61  E-value=0.0083  Score=49.06  Aligned_cols=73  Identities=19%  Similarity=0.398  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-----cCCc-EEe--eCCC-cccccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-----LGAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-----~g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      .+++++|+|++|++|...++.+... |++|+++++++++.+.+.+     .+.. ..+  |-.+ +.+...       .+
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASA-GSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999998888774 9999999998877654422     2322 222  2111 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        85 ~~d~vi~~Ag   94 (248)
T 2pnf_A           85 GIDILVNNAG   94 (248)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.61  E-value=0.0095  Score=53.96  Aligned_cols=88  Identities=19%  Similarity=0.191  Sum_probs=68.5

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---  224 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---  224 (284)
                      .-.|.+|.|+| .|.+|..+++.++.+ |++|++.++++.+...+...|.. +     ..+.+..+..|+|+.+.+.   
T Consensus       254 ~l~GktVgIIG-~G~IG~~vA~~l~~~-G~~Viv~d~~~~~~~~a~~~g~~-~-----~~l~ell~~aDiVi~~~~t~~l  325 (479)
T 1v8b_A          254 LISGKIVVICG-YGDVGKGCASSMKGL-GARVYITEIDPICAIQAVMEGFN-V-----VTLDEIVDKGDFFITCTGNVDV  325 (479)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSCHHHHHHHHTTTCE-E-----CCHHHHTTTCSEEEECCSSSSS
T ss_pred             ccCCCEEEEEe-eCHHHHHHHHHHHhC-cCEEEEEeCChhhHHHHHHcCCE-e-----cCHHHHHhcCCEEEECCChhhh
Confidence            45789999999 899999999999996 99999999998876455555542 1     1234445679999988764   


Q ss_pred             c-HHHHHhhccCCEEEEEcC
Q 023273          225 C-DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       225 ~-~~~~~~l~~~G~~v~~g~  243 (284)
                      . ...++.|+++..++.++-
T Consensus       326 I~~~~l~~MK~gailiNvgr  345 (479)
T 1v8b_A          326 IKLEHLLKMKNNAVVGNIGH  345 (479)
T ss_dssp             BCHHHHTTCCTTCEEEECSS
T ss_pred             cCHHHHhhcCCCcEEEEeCC
Confidence            2 577888999999988864

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=96.60  E-value=0.0051  Score=50.87  Aligned_cols=73  Identities=29%  Similarity=0.397  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEe--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAI--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+. +++.. ..+  |-.+ +.+...       .+.+|+
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGE-GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999998888874 999999999888766553 44432 222  2111 111111       236899


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|+++|
T Consensus        84 lv~~Ag   89 (253)
T 1hxh_A           84 LVNNAG   89 (253)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.59  E-value=0.0076  Score=50.16  Aligned_cols=42  Identities=21%  Similarity=0.378  Sum_probs=36.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .++++||+|+++++|.+.++..... |++|+++++++++.+.+
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~   48 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEA-GAAVAFCARDGERLRAA   48 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5789999999999999988888774 99999999988876554

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.59  E-value=0.0031  Score=52.02  Aligned_cols=73  Identities=26%  Similarity=0.462  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEe--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAI--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .++++||+|+++++|.+.++..... |++|+++++++++.+.+. +++.. ..+  |-.+ +.....       .+++|+
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAER-GAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988888874 999999999988776653 33321 122  2221 111111       247999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +++++|
T Consensus        87 lv~nAg   92 (248)
T 3op4_A           87 LVNNAG   92 (248)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=96.58  E-value=0.012  Score=48.30  Aligned_cols=94  Identities=16%  Similarity=0.208  Sum_probs=65.7

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC---cEEeeCCCcccccCCCcccEE
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA---DLAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~~~~d~v  218 (284)
                      ..+.++++||-+| +| .|..+..+++.. +.+++.++.+++..+.+++    .+.   ..++..+...++...+.+|+|
T Consensus        42 ~~~~~~~~vLDiG-~G-~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v  118 (257)
T 3f4k_A           42 NELTDDAKIADIG-CG-TGGQTLFLADYV-KGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLI  118 (257)
T ss_dssp             CCCCTTCEEEEET-CT-TSHHHHHHHHHC-CSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEE
T ss_pred             hcCCCCCeEEEeC-CC-CCHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEE
Confidence            4678899999999 44 588889999984 6699999999998877754    332   123332222222224679999


Q ss_pred             EeCCC----C----cHHHHHhhccCCEEEEEc
Q 023273          219 FDAVG----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       219 id~~g----~----~~~~~~~l~~~G~~v~~g  242 (284)
                      +....    +    ...+.+.|+++|++++..
T Consensus       119 ~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          119 WSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             EEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             EecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence            86532    2    367888999999999875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.57  E-value=0.0042  Score=52.36  Aligned_cols=73  Identities=29%  Similarity=0.420  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-Hc---CCc-EEe--eCCCc-ccccC-------CCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL---GAD-LAI--DYTKE-NIEDL-------PEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~---g~~-~~~--~~~~~-~~~~~-------~~~  214 (284)
                      .++++||+|+++++|.+.++.+... |++|+++++++++.+.+. ++   +.. ..+  |-.+. .....       .++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFARE-GAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999988888774 999999999988766553 32   222 122  11111 11111       247


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++|+++|
T Consensus        86 iD~lvnnAg   94 (280)
T 3tox_A           86 LDTAFNNAG   94 (280)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.57  E-value=0.0065  Score=50.94  Aligned_cols=74  Identities=22%  Similarity=0.377  Sum_probs=48.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH---cCCc-EEe--eCCC-cccccC------CCcc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS---LGAD-LAI--DYTK-ENIEDL------PEKF  215 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~---~g~~-~~~--~~~~-~~~~~~------~~~~  215 (284)
                      -.++++||+|+++++|.+.++.+... |++|++++++++..+.+++   .+.. ..+  |-.+ +.....      .+++
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~i  107 (273)
T 3uf0_A           29 LAGRTAVVTGAGSGIGRAIAHGYARA-GAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRV  107 (273)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence            35789999999999999988887774 9999999976544443333   2322 122  2111 111111      2479


Q ss_pred             cEEEeCCC
Q 023273          216 DVVFDAVG  223 (284)
Q Consensus       216 d~vid~~g  223 (284)
                      |++|+++|
T Consensus       108 D~lv~nAg  115 (273)
T 3uf0_A          108 DVLVNNAG  115 (273)
T ss_dssp             CEEEECCC
T ss_pred             cEEEECCC
Confidence            99999987

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.57  E-value=0.007  Score=50.27  Aligned_cols=73  Identities=23%  Similarity=0.284  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEe--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAI--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+. ++... ..+  |-.+ +.+...       .+++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAE-GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999998888774 999999999888766543 33321 122  2211 111111       237999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|+++|
T Consensus        85 lv~~Ag   90 (260)
T 1nff_A           85 LVNNAG   90 (260)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}

Probab=96.57  E-value=0.0038  Score=51.98  Aligned_cols=90  Identities=17%  Similarity=0.126  Sum_probs=62.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC-C---
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q---  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g-~---  224 (284)
                      ..+.+||-+| || .|..+..++..  +.+|+.++.+++.++.+++...-..+..+.+.+.-..+.+|+|+.+.. +   
T Consensus        38 ~~~~~vLDvG-cG-tG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~  113 (257)
T 4hg2_A           38 PARGDALDCG-CG-SGQASLGLAEF--FERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFD  113 (257)
T ss_dssp             SCSSEEEEES-CT-TTTTHHHHHTT--CSEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCC
T ss_pred             CCCCCEEEEc-CC-CCHHHHHHHHh--CCEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhh
Confidence            3457899998 44 57788888775  789999999988777665543323333333333333467999987643 2   


Q ss_pred             ----cHHHHHhhccCCEEEEEc
Q 023273          225 ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ----~~~~~~~l~~~G~~v~~g  242 (284)
                          +..+.+.|+|+|+++++.
T Consensus       114 ~~~~~~e~~rvLkpgG~l~~~~  135 (257)
T 4hg2_A          114 LDRFWAELRRVARPGAVFAAVT  135 (257)
T ss_dssp             HHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHHHHHHHHHHcCCCCEEEEEE
Confidence                267889999999998874

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.57  E-value=0.0092  Score=49.36  Aligned_cols=42  Identities=24%  Similarity=0.213  Sum_probs=36.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|++|++|...++.+... |++|+++++++++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~   47 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGE-GATVAACDLDRAAAQET   47 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHH
Confidence            5789999999999999988888774 99999999988876654

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.57  E-value=0.007  Score=50.79  Aligned_cols=74  Identities=18%  Similarity=0.279  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCC-cccccC------CCc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTK-ENIEDL------PEK  214 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~-~~~~~~------~~~  214 (284)
                      -.+++++|+|+++++|.+.++..... |++|+++++++++.+.+.    +.+.. ..+  |-.+ +.....      .++
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~  109 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGA-GAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP  109 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            35789999999999999988888874 999999999877655442    23432 222  2111 111111      147


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++++++|
T Consensus       110 iD~lvnnAg  118 (275)
T 4imr_A          110 VDILVINAS  118 (275)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.57  E-value=0.0074  Score=50.31  Aligned_cols=73  Identities=21%  Similarity=0.334  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcC-CcE--Ee--eCCCc-cccc---CCCccc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLG-ADL--AI--DYTKE-NIED---LPEKFD  216 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g-~~~--~~--~~~~~-~~~~---~~~~~d  216 (284)
                      .++++||+|+++++|.+.++..... |++|+++++++++.+...    +.+ ...  .+  |-.+. ....   .-+++|
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   87 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAE-GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD   87 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence            5789999999999999988887774 999999999887765442    222 111  11  21111 1111   135799


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      ++++++|
T Consensus        88 ~lv~nAg   94 (267)
T 3t4x_A           88 ILINNLG   94 (267)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.56  E-value=0.0034  Score=52.50  Aligned_cols=72  Identities=17%  Similarity=0.272  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe--eCCC-cccccC-------CCcccEEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTK-ENIEDL-------PEKFDVVF  219 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~-~~~~~~-------~~~~d~vi  219 (284)
                      .++++||+|++|++|.+.++.+... |++|++++++.++.+.+.... ...+  |-.+ +.+...       .+++|++|
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEE-GHPLLLLARRVERLKALNLPN-TLCAQVDVTDKYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCHHHHHTTCCTT-EEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHhhcCC-ceEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            4689999999999999988887774 999999999887765432211 1122  2111 111111       24799999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +++|
T Consensus        93 nnAg   96 (266)
T 3p19_A           93 NNAG   96 (266)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9988

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.55  E-value=0.0075  Score=49.91  Aligned_cols=73  Identities=23%  Similarity=0.353  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCc-EEe--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAI--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .+++++|+|++|++|...++.+... |++|+++++++++.+.+ ++++.. .++  |-.+ +.+...       .+++|+
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQ-GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            5789999999999999999888874 99999999987776554 344432 222  2211 111111       237999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|+++|
T Consensus        90 li~~Ag   95 (265)
T 2o23_A           90 AVNCAG   95 (265)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.55  E-value=0.0064  Score=49.90  Aligned_cols=73  Identities=16%  Similarity=0.214  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcC---CcEEeeCC--C-cccccC-------CCcc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLG---ADLAIDYT--K-ENIEDL-------PEKF  215 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g---~~~~~~~~--~-~~~~~~-------~~~~  215 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+. ++.   ....+..+  + +.+...       .+.+
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEE-GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999998888874 999999999887765543 332   11222211  1 111111       2369


Q ss_pred             cEEEeCCC
Q 023273          216 DVVFDAVG  223 (284)
Q Consensus       216 d~vid~~g  223 (284)
                      |++|+++|
T Consensus        84 d~li~~Ag   91 (251)
T 1zk4_A           84 STLVNNAG   91 (251)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.55  E-value=0.011  Score=49.76  Aligned_cols=42  Identities=17%  Similarity=0.323  Sum_probs=34.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~  192 (284)
                      .++++||+|+++++|.+.++..... |++|+++++ ++++.+.+
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~   66 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKA-GANIVLNGFGAPDEIRTV   66 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEECCCCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHH
Confidence            5789999999999999988887774 999999998 55554443

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.54  E-value=0.0063  Score=50.97  Aligned_cols=74  Identities=22%  Similarity=0.366  Sum_probs=50.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcE-Ee--eCCC-ccccc-------CCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AI--DYTK-ENIED-------LPE  213 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-~~--~~~~-~~~~~-------~~~  213 (284)
                      -.|+++||+|+++++|.+.++..... |++|+++++++++.+.+.    +.+... .+  |-.+ +....       ..+
T Consensus        24 l~gk~~lVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (271)
T 4ibo_A           24 LGGRTALVTGSSRGLGRAMAEGLAVA-GARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI  102 (271)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            35789999999999999988888774 999999999888765442    334322 22  1111 11111       134


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++++++|
T Consensus       103 ~iD~lv~nAg  112 (271)
T 4ibo_A          103 DVDILVNNAG  112 (271)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.54  E-value=0.0086  Score=48.61  Aligned_cols=71  Identities=21%  Similarity=0.310  Sum_probs=48.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCc-EEe--eCCCc-c----cccCCCcccEEEeCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-LAI--DYTKE-N----IEDLPEKFDVVFDAV  222 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~-~~~--~~~~~-~----~~~~~~~~d~vid~~  222 (284)
                      +++||+|++|++|.+.++..... |++|+++++++++.+.+.+ ++.. ..+  |-.+. .    +....+.+|++++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A   80 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAE-GKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA   80 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred             CEEEEecCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence            36899999999999988888874 9999999999988877653 3321 111  22211 1    112234459999998


Q ss_pred             C
Q 023273          223 G  223 (284)
Q Consensus       223 g  223 (284)
                      |
T Consensus        81 g   81 (230)
T 3guy_A           81 G   81 (230)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=96.54  E-value=0.0082  Score=49.87  Aligned_cols=76  Identities=21%  Similarity=0.314  Sum_probs=50.2

Q ss_pred             ccCCCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcEEeeCC--C-cccccC------
Q 023273          147 AFSAGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYT--K-ENIEDL------  211 (284)
Q Consensus       147 ~~~~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~--~-~~~~~~------  211 (284)
                      ....++++||+|++  +++|.+.++..... |++|++++++++..+.++    +.+....+.-+  + +.....      
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKRE-GAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHc-CCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            34578999999988  99999988887774 999999988755444333    33322222221  1 111111      


Q ss_pred             -CCcccEEEeCCC
Q 023273          212 -PEKFDVVFDAVG  223 (284)
Q Consensus       212 -~~~~d~vid~~g  223 (284)
                       .+++|++|+++|
T Consensus        89 ~~g~id~lv~nAg  101 (271)
T 3ek2_A           89 HWDSLDGLVHSIG  101 (271)
T ss_dssp             HCSCEEEEEECCC
T ss_pred             HcCCCCEEEECCc
Confidence             357999999886

>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A

Probab=96.54  E-value=0.011  Score=46.83  Aligned_cols=91  Identities=20%  Similarity=0.273  Sum_probs=60.6

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CCc-EEeeCCCcccccCCCcccEEEeCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD-LAIDYTKENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~d~vid~~  222 (284)
                      +.++ +||-+| +|. |..+..+++.  +.+++.++.+++..+.+++.    +.. .++..+........+.+|+|+.+.
T Consensus        28 ~~~~-~vLdiG-cG~-G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~  102 (202)
T 2kw5_A           28 IPQG-KILCLA-EGE-GRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF  102 (202)
T ss_dssp             SCSS-EEEECC-CSC-THHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC
T ss_pred             CCCC-CEEEEC-CCC-CHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh
Confidence            4566 999998 454 7777777775  77999999999888777643    221 222222222222235799998764


Q ss_pred             CC---------cHHHHHhhccCCEEEEEcC
Q 023273          223 GQ---------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       223 g~---------~~~~~~~l~~~G~~v~~g~  243 (284)
                      ..         ...+.+.|+++|++++...
T Consensus       103 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  132 (202)
T 2kw5_A          103 CHLPSSLRQQLYPKVYQGLKPGGVFILEGF  132 (202)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCSSEEEEEEEE
T ss_pred             hcCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            42         2567788999999988753

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.53  E-value=0.0099  Score=49.03  Aligned_cols=73  Identities=21%  Similarity=0.345  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCc-EEeeCC--C-cccccC-------CCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD-LAIDYT--K-ENIEDL-------PEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~-~~~~~~--~-~~~~~~-------~~~  214 (284)
                      .+++++|+|++|++|...++.+... |++|+++++++++.+.+    ++.+.. .++..+  + +.+...       .++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEA-GARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999998888874 99999999987765433    223422 222221  1 111111       237


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++|+++|
T Consensus        91 id~vi~~Ag   99 (260)
T 3awd_A           91 VDILVACAG   99 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999886

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=96.53  E-value=0.0042  Score=46.12  Aligned_cols=73  Identities=22%  Similarity=0.373  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe-eCCC-cccccC-CCcccEEEeCCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTK-ENIEDL-PEKFDVVFDAVGQ  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~-~~~~~~-~~~~d~vid~~g~  224 (284)
                      .+++|+|+| +|.+|...++.+... |.+++++++++++.+.+++.+...+. +..+ +.+.+. .+++|+++.+++.
T Consensus         5 ~~~~v~I~G-~G~iG~~~a~~l~~~-g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            5 KNKQFAVIG-LGRFGGSIVKELHRM-GHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             -CCSEEEEC-CSHHHHHHHHHHHHT-TCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCS
T ss_pred             cCCcEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCC
Confidence            356799999 599999999999885 89999999988887766655543222 2211 112222 3579999999985

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.53  E-value=0.0078  Score=50.31  Aligned_cols=42  Identities=19%  Similarity=0.219  Sum_probs=35.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~  192 (284)
                      .++++||+|++|++|.+.++.+... |++|+++++ ++++.+.+
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~   52 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQ-GFRVVVHYRHSEGAAQRL   52 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHH
Confidence            5689999999999999988888774 999999999 87766544

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.53  E-value=0.01  Score=54.03  Aligned_cols=88  Identities=24%  Similarity=0.235  Sum_probs=68.0

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---  224 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---  224 (284)
                      .-.|.+|.|+| .|.+|..+++.++.+ |++|++.++++.+...+...|.. +     ..+.+..+..|+|+.+++.   
T Consensus       274 ~L~GktVgIIG-~G~IG~~vA~~l~~~-G~~V~v~d~~~~~~~~a~~~G~~-~-----~~l~ell~~aDiVi~~~~t~~l  345 (494)
T 3d64_A          274 MIAGKIAVVAG-YGDVGKGCAQSLRGL-GATVWVTEIDPICALQAAMEGYR-V-----VTMEYAADKADIFVTATGNYHV  345 (494)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSCHHHHHHHHTTTCE-E-----CCHHHHTTTCSEEEECSSSSCS
T ss_pred             ccCCCEEEEEc-cCHHHHHHHHHHHHC-CCEEEEEeCChHhHHHHHHcCCE-e-----CCHHHHHhcCCEEEECCCcccc
Confidence            35789999999 899999999999995 99999999988775444455543 1     1244445679999998764   


Q ss_pred             c-HHHHHhhccCCEEEEEcC
Q 023273          225 C-DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       225 ~-~~~~~~l~~~G~~v~~g~  243 (284)
                      . ...++.|+++..++.++-
T Consensus       346 I~~~~l~~MK~gAilINvgr  365 (494)
T 3d64_A          346 INHDHMKAMRHNAIVCNIGH  365 (494)
T ss_dssp             BCHHHHHHCCTTEEEEECSS
T ss_pred             cCHHHHhhCCCCcEEEEcCC
Confidence            2 678899999988888854

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.52  E-value=0.0074  Score=50.50  Aligned_cols=74  Identities=15%  Similarity=0.278  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCC-cccccC-------CC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      -.++++||+|+++++|.+.++.+... |++|+++++++++.+.+.    +.+.. ..+  |-.+ +.....       .+
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARR-GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG  104 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999988887774 999999999887765442    23321 222  2221 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus       105 ~iD~lvnnAg  114 (270)
T 3ftp_A          105 ALNVLVNNAG  114 (270)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.52  E-value=0.0064  Score=49.92  Aligned_cols=72  Identities=19%  Similarity=0.216  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCC--Cc----ccc---cCCCcccEEEe
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYT--KE----NIE---DLPEKFDVVFD  220 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~--~~----~~~---~~~~~~d~vid  220 (284)
                      .++++||+|++|++|.+.++....  +.+|+++++++++.+.+.+......+..+  +.    ...   +..+++|++|+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~   81 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR--DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH   81 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence            468899999999999998887754  78899999998888777664322222211  00    011   11347999999


Q ss_pred             CCC
Q 023273          221 AVG  223 (284)
Q Consensus       221 ~~g  223 (284)
                      ++|
T Consensus        82 ~Ag   84 (245)
T 3e9n_A           82 AAA   84 (245)
T ss_dssp             CC-
T ss_pred             CCC
Confidence            987

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.51  E-value=0.0098  Score=50.44  Aligned_cols=74  Identities=20%  Similarity=0.245  Sum_probs=49.6

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcEEeeCCCcc---cccC-------C
Q 023273          149 SAGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYTKEN---IEDL-------P  212 (284)
Q Consensus       149 ~~g~~vlI~ga~g--~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~---~~~~-------~  212 (284)
                      ..++++||+|++|  ++|.+.++.+... |++|++++++++..+.++    +.+....+.-+-.+   ....       .
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW  106 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3578999999887  9999988887774 999999999876544432    33433333222111   1111       2


Q ss_pred             CcccEEEeCCC
Q 023273          213 EKFDVVFDAVG  223 (284)
Q Consensus       213 ~~~d~vid~~g  223 (284)
                      +++|++|+++|
T Consensus       107 g~iD~lVnnAG  117 (296)
T 3k31_A          107 GSLDFVVHAVA  117 (296)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.51  E-value=0.01  Score=49.71  Aligned_cols=91  Identities=15%  Similarity=0.251  Sum_probs=58.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCc-EEeeCCCcccccCCCcccEEEeCCCCcH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAIDYTKENIEDLPEKFDVVFDAVGQCD  226 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~  226 (284)
                      -.+++++|+| +|++|.+++..+... |.+|+++.++.++.+.+ ++++.. .+...+.+...+  +++|+++++++...
T Consensus       117 l~~k~vlViG-aGg~g~a~a~~L~~~-G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~--~~~DivVn~t~~~~  192 (271)
T 1nyt_A          117 RPGLRILLIG-AGGASRGVLLPLLSL-DCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEG--HEFDLIINATSSGI  192 (271)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTT--CCCSEEEECCSCGG
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhcc--CCCCEEEECCCCCC
Confidence            3678999999 589999999988885 79999999998886554 454421 110111111211  58999999998532


Q ss_pred             ------HHHHhhccCCEEEEEcC
Q 023273          227 ------KALKAVKEGGRVVSIIG  243 (284)
Q Consensus       227 ------~~~~~l~~~G~~v~~g~  243 (284)
                            .....++++..++.+..
T Consensus       193 ~~~~~~i~~~~l~~~~~v~D~~y  215 (271)
T 1nyt_A          193 SGDIPAIPSSLIHPGIYCYDMFY  215 (271)
T ss_dssp             GTCCCCCCGGGCCTTCEEEESCC
T ss_pred             CCCCCCCCHHHcCCCCEEEEecc
Confidence                  12234555555655543

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.50  E-value=0.0085  Score=49.23  Aligned_cols=73  Identities=26%  Similarity=0.486  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH----HHcCCc-EEe--eCCC-cccccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~----~~~g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++ ++++.+.+    ++.+.. ..+  |-.+ +.+...       .+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQ-GANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4688999999999999998888874 999999998 76665443    223432 222  2211 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        82 ~id~lv~nAg   91 (246)
T 2uvd_A           82 QVDILVNNAG   91 (246)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.50  E-value=0.0088  Score=49.55  Aligned_cols=74  Identities=20%  Similarity=0.273  Sum_probs=50.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCc-EEe--eCCC-cccccC-------CC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      ..+++++|+|++|++|.+.++.+... |++|+++++++++.+.+    ++.+.. ..+  |-.+ +.....       .+
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQD-GAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999998888874 99999999988766543    223322 122  2111 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        91 ~iD~lv~~Ag  100 (260)
T 2zat_A           91 GVDILVSNAA  100 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=96.48  E-value=0.01  Score=50.14  Aligned_cols=43  Identities=23%  Similarity=0.353  Sum_probs=34.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCC---eEEEEeCChhhHHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA---SKVAATSSTAKLDLLR  193 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~---~vi~~~~~~~~~~~~~  193 (284)
                      .++++||+|+++++|.+.++..... |+   +|+++.+++++.+.+.
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~-G~~~~~V~~~~r~~~~~~~~~   77 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEA-SNGDMKLILAARRLEKLEELK   77 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHH-HTTCSEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCCCceEEEEECCHHHHHHHH
Confidence            5789999999999999988766553 55   9999999988776553

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.47  E-value=0.0055  Score=50.32  Aligned_cols=69  Identities=16%  Similarity=0.111  Sum_probs=48.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEE-e--CChhhHHHHH-Hc-CCcEEeeCCCccccc-------CCCcccEE
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-T--SSTAKLDLLR-SL-GADLAIDYTKENIED-------LPEKFDVV  218 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~--~~~~~~~~~~-~~-g~~~~~~~~~~~~~~-------~~~~~d~v  218 (284)
                      +++++|+|++|++|.+.++.+... |++|+++ .  +++++.+.+. ++ +. .+.+.+  ....       ..+++|++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~g~iD~l   76 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQD-GYTVVCHDASFADAAERQRFESENPGT-IALAEQ--KPERLVDATLQHGEAIDTI   76 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHT-TCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCC--CGGGHHHHHGGGSSCEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHH--HHHHHHHHHHHHcCCCCEE
Confidence            468999999999999998888874 9999998 6  8887776553 44 22 222222  2111       13479999


Q ss_pred             EeCCC
Q 023273          219 FDAVG  223 (284)
Q Consensus       219 id~~g  223 (284)
                      |+++|
T Consensus        77 v~~Ag   81 (244)
T 1zmo_A           77 VSNDY   81 (244)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.47  E-value=0.0075  Score=49.99  Aligned_cols=73  Identities=27%  Similarity=0.433  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh-HHHHH-Hc----CCc-EEe--eCCC-cccccC-------C
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLR-SL----GAD-LAI--DYTK-ENIEDL-------P  212 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~-~~~~~-~~----g~~-~~~--~~~~-~~~~~~-------~  212 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++ .+.+. ++    +.. ..+  |-.+ +.+...       .
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQ-GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHc-CCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999998888874 9999999988766 44332 22    422 222  2211 111111       2


Q ss_pred             CcccEEEeCCC
Q 023273          213 EKFDVVFDAVG  223 (284)
Q Consensus       213 ~~~d~vid~~g  223 (284)
                      +++|++|+++|
T Consensus        82 g~iD~lv~~Ag   92 (260)
T 1x1t_A           82 GRIDILVNNAG   92 (260)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.46  E-value=0.005  Score=50.34  Aligned_cols=73  Identities=19%  Similarity=0.152  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-cccccCCCcccEEEeCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~d~vid~~g  223 (284)
                      .+.+|+|+|++|.+|...++.+...+ +.+|+++++++++.+.+ ..+...+ .|..+ +.+.+.-+++|++|+++|
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~   78 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTS   78 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEecc
Confidence            46789999999999999988888733 78999999987765543 1112111 12221 223333457999999876

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.46  E-value=0.025  Score=46.29  Aligned_cols=98  Identities=21%  Similarity=0.222  Sum_probs=66.3

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHcCCc----EEeeCCC---cccccCCC
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSLGAD----LAIDYTK---ENIEDLPE  213 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~g~~----~~~~~~~---~~~~~~~~  213 (284)
                      .++...++||++||-+|+  +.|..+..+|+..+ ..+|++++.+++..+.+++.-..    ..+..+.   ........
T Consensus        69 gl~~l~ikpG~~VldlG~--G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~  146 (233)
T 4df3_A           69 GLIELPVKEGDRILYLGI--ASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVE  146 (233)
T ss_dssp             TCSCCCCCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCC
T ss_pred             chhhcCCCCCCEEEEecC--cCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccc
Confidence            346688999999999995  45777888888762 35899999999988877643211    1122111   11222345


Q ss_pred             cccEEEeCCCCc-------HHHHHhhccCCEEEEE
Q 023273          214 KFDVVFDAVGQC-------DKALKAVKEGGRVVSI  241 (284)
Q Consensus       214 ~~d~vid~~g~~-------~~~~~~l~~~G~~v~~  241 (284)
                      .+|+|+.....+       ..+.+.|+++|++++.
T Consensus       147 ~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          147 GVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            799888655432       4567889999999875

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.45  E-value=0.0065  Score=51.06  Aligned_cols=42  Identities=29%  Similarity=0.335  Sum_probs=36.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .++++||+|++|++|.+.++..... |++|+++++++++.+.+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~   51 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAA-GASVMIVGRNPDKLAGA   51 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5789999999999999988887774 99999999988876544

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.45  E-value=0.0085  Score=49.24  Aligned_cols=73  Identities=25%  Similarity=0.446  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCc-EEe--eCCC-cccccC-------CCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD-LAI--DYTK-ENIEDL-------PEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~-~~~--~~~~-~~~~~~-------~~~  214 (284)
                      .+++++|+|++|++|...++.+... |++|+++++++++.+.+    ++.+.. ..+  |-.+ +.+...       .++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999998888874 99999999988765443    223432 222  2111 111111       237


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++|+++|
T Consensus        89 ~d~vi~~Ag   97 (255)
T 1fmc_A           89 VDILVNNAG   97 (255)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.45  E-value=0.014  Score=48.84  Aligned_cols=84  Identities=24%  Similarity=0.302  Sum_probs=60.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC------
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ------  224 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~------  224 (284)
                      +++++|+| +|++|.+++..+... |.+++++.++.+|.+.+.+++.. ....+     +. ..+|+||+|+..      
T Consensus       118 ~k~vlvlG-aGGaaraia~~L~~~-G~~v~V~nRt~~ka~~la~~~~~-~~~~~-----~l-~~~DiVInaTp~Gm~~~~  188 (269)
T 3phh_A          118 YQNALILG-AGGSAKALACELKKQ-GLQVSVLNRSSRGLDFFQRLGCD-CFMEP-----PK-SAFDLIINATSASLHNEL  188 (269)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCTTHHHHHHHTCE-EESSC-----CS-SCCSEEEECCTTCCCCSC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCe-EecHH-----Hh-ccCCEEEEcccCCCCCCC
Confidence            88999999 799999998888885 79999999998887666576632 22221     12 279999999752      


Q ss_pred             c--HH-HHHhhccCCEEEEEcC
Q 023273          225 C--DK-ALKAVKEGGRVVSIIG  243 (284)
Q Consensus       225 ~--~~-~~~~l~~~G~~v~~g~  243 (284)
                      +  .. ....++++..++.+..
T Consensus       189 ~l~~~~l~~~l~~~~~v~D~vY  210 (269)
T 3phh_A          189 PLNKEVLKGYFKEGKLAYDLAY  210 (269)
T ss_dssp             SSCHHHHHHHHHHCSEEEESCC
T ss_pred             CCChHHHHhhCCCCCEEEEeCC
Confidence            1  22 2236778877777654

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.44  E-value=0.01  Score=49.12  Aligned_cols=90  Identities=20%  Similarity=0.267  Sum_probs=61.1

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-EEeeCCCcccccCCCcccEEEeCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~d~vid~~  222 (284)
                      +.++++||-+| +|. |..++.+++.  +.+++.++.++...+.+++    .+.. .++..+.... -..+.+|+|+.+.
T Consensus       118 ~~~~~~VLDiG-cG~-G~l~~~la~~--g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~  192 (254)
T 2nxc_A          118 LRPGDKVLDLG-TGS-GVLAIAAEKL--GGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANL  192 (254)
T ss_dssp             CCTTCEEEEET-CTT-SHHHHHHHHT--TCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEEC
T ss_pred             cCCCCEEEEec-CCC-cHHHHHHHHh--CCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECC
Confidence            67899999999 555 7777777775  5599999999998877764    2322 2222111110 0135799998754


Q ss_pred             C-C-----cHHHHHhhccCCEEEEEc
Q 023273          223 G-Q-----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       223 g-~-----~~~~~~~l~~~G~~v~~g  242 (284)
                      - .     ...+.++|+++|++++.+
T Consensus       193 ~~~~~~~~l~~~~~~LkpgG~lils~  218 (254)
T 2nxc_A          193 YAELHAALAPRYREALVPGGRALLTG  218 (254)
T ss_dssp             CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence            3 1     367888999999999765

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.44  E-value=0.012  Score=49.55  Aligned_cols=73  Identities=21%  Similarity=0.390  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCC-cccccC-------CCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTK-ENIEDL-------PEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~-~~~~~~-------~~~  214 (284)
                      .+++++|+|++|++|...++.+... |++|+++.+++++.+.+.    +.+.. ..+  |-.+ +.+...       .++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~  121 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKS-VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN  121 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTT-SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999888874 899999888877655432    22432 122  2211 111111       257


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++|+++|
T Consensus       122 id~li~~Ag  130 (285)
T 2c07_A          122 VDILVNNAG  130 (285)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.44  E-value=0.014  Score=45.29  Aligned_cols=94  Identities=14%  Similarity=0.166  Sum_probs=64.5

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC-c--EEeeCCCcc-cccCCCcc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA-D--LAIDYTKEN-IEDLPEKF  215 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~-~--~~~~~~~~~-~~~~~~~~  215 (284)
                      ......++++||.+| +|. |..+..+++.  +.+++.++.+++..+.+++    .+. .  .++..+... +.. .+.+
T Consensus        27 ~~~~~~~~~~vldiG-~G~-G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~  101 (192)
T 1l3i_A           27 CLAEPGKNDVAVDVG-CGT-GGVTLELAGR--VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK-IPDI  101 (192)
T ss_dssp             HHHCCCTTCEEEEES-CTT-SHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT-SCCE
T ss_pred             HhcCCCCCCEEEEEC-CCC-CHHHHHHHHh--cCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc-CCCC
Confidence            455788999999999 555 8888888886  3899999999998877764    332 1  222222111 111 1479


Q ss_pred             cEEEeCCC--C----cHHHHHhhccCCEEEEEc
Q 023273          216 DVVFDAVG--Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       216 d~vid~~g--~----~~~~~~~l~~~G~~v~~g  242 (284)
                      |+|+....  .    ...+.+.|+++|++++..
T Consensus       102 D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A          102 DIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             EEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            99987643  2    267788999999998754

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.44  E-value=0.0086  Score=49.38  Aligned_cols=71  Identities=24%  Similarity=0.402  Sum_probs=48.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEe--eCCC-ccccc----C---CCcccEEE
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAI--DYTK-ENIED----L---PEKFDVVF  219 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~--~~~~-~~~~~----~---~~~~d~vi  219 (284)
                      ++++|+|++|++|.+.++.+... |++|+++++++++.+.+. +++.. ..+  |-.+ +.+..    .   .+++|++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   79 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILV   79 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence            36899999999999988888874 999999999888776553 34322 222  2211 11111    1   24799999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +++|
T Consensus        80 nnAg   83 (248)
T 3asu_A           80 NNAG   83 (248)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9887

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=96.44  E-value=0.015  Score=48.52  Aligned_cols=87  Identities=10%  Similarity=0.124  Sum_probs=62.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc------
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC------  225 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~------  225 (284)
                      .+|+|+|+ |.+|...++.+... |.+|+++++++++.+.+...+.. .+..+-.++.  .+++|+||.+++..      
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~d~~--~~~~d~vi~~a~~~~~~~~~   80 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQ-GWRIIGTSRNPDQMEAIRASGAE-PLLWPGEEPS--LDGVTHLLISTAPDSGGDPV   80 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGG-TCEEEEEESCGGGHHHHHHTTEE-EEESSSSCCC--CTTCCEEEECCCCBTTBCHH
T ss_pred             CcEEEECC-cHHHHHHHHHHHHC-CCEEEEEEcChhhhhhHhhCCCe-EEEecccccc--cCCCCEEEECCCccccccHH
Confidence            68999997 99999999998885 99999999999888777665543 2222222233  57899999998731      


Q ss_pred             -HHHHHhhcc----CCEEEEEcC
Q 023273          226 -DKALKAVKE----GGRVVSIIG  243 (284)
Q Consensus       226 -~~~~~~l~~----~G~~v~~g~  243 (284)
                       ...++.++.    -.++|.++.
T Consensus        81 ~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           81 LAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             HHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             HHHHHHHHHhhcCCceEEEEeec
Confidence             334444433    378888753

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=96.44  E-value=0.0094  Score=49.58  Aligned_cols=42  Identities=24%  Similarity=0.181  Sum_probs=35.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   47 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLK-GAKVALVDWNLEAGVQC   47 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5679999999999999998888874 99999999988776543

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=96.42  E-value=0.0082  Score=48.47  Aligned_cols=92  Identities=15%  Similarity=0.194  Sum_probs=62.8

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc-----------EEeeCCCcccccCCCccc
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-----------LAIDYTKENIEDLPEKFD  216 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~~~~d  216 (284)
                      ++++++||-+| +| .|..+..+++.  +.+++.++.+++..+.+++....           .++..+...+....+.+|
T Consensus        28 ~~~~~~vLdiG-~G-~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D  103 (235)
T 3sm3_A           28 LQEDDEILDIG-CG-SGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFD  103 (235)
T ss_dssp             CCTTCEEEEET-CT-TSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEE
T ss_pred             CCCCCeEEEEC-CC-CCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCcee
Confidence            56889999999 44 47788888876  77999999999988888763321           122222222222246799


Q ss_pred             EEEeCCC-----C-------cHHHHHhhccCCEEEEEcC
Q 023273          217 VVFDAVG-----Q-------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       217 ~vid~~g-----~-------~~~~~~~l~~~G~~v~~g~  243 (284)
                      +|+....     +       ...+.+.|+++|++++...
T Consensus       104 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  142 (235)
T 3sm3_A          104 FAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF  142 (235)
T ss_dssp             EEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence            9986432     1       2467789999999998743

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.41  E-value=0.011  Score=49.46  Aligned_cols=74  Identities=18%  Similarity=0.313  Sum_probs=50.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-H----cCCc-EEe--eCCCc-ccccC-------C
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-S----LGAD-LAI--DYTKE-NIEDL-------P  212 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~----~g~~-~~~--~~~~~-~~~~~-------~  212 (284)
                      -.++++||+|+++++|.+.++..... |++|++++++.++.+... +    .+.. ..+  |-.+. .....       .
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRH-GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999988888774 999999999887654432 2    2322 222  22111 11111       2


Q ss_pred             CcccEEEeCCC
Q 023273          213 EKFDVVFDAVG  223 (284)
Q Consensus       213 ~~~d~vid~~g  223 (284)
                      +++|++++++|
T Consensus       104 g~id~lv~nAg  114 (277)
T 4fc7_A          104 GRIDILINCAA  114 (277)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999987

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.41  E-value=0.0072  Score=50.11  Aligned_cols=73  Identities=18%  Similarity=0.246  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-hcCCeEEEEeCChhhHHHH----HHcCC-cEEeeCCCcc---cccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKH-VFGASKVAATSSTAKLDLL----RSLGA-DLAIDYTKEN---IEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~-~~g~~vi~~~~~~~~~~~~----~~~g~-~~~~~~~~~~---~~~~-------~~  213 (284)
                      .+++++|+|++|++|...++.+.. . |++|++++++.++.+.+    +..+. ..++..+-.+   +...       .+
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLF-SGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHS-SSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhc-CCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            578999999999999998887766 5 89999999987765443    22232 2222221111   1111       23


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        82 ~id~li~~Ag   91 (276)
T 1wma_A           82 GLDVLVNNAG   91 (276)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999987

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.41  E-value=0.012  Score=48.71  Aligned_cols=72  Identities=22%  Similarity=0.306  Sum_probs=47.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh--HHHH-HH---cCCc-EEe--eCCC-cccccC-------CC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK--LDLL-RS---LGAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~--~~~~-~~---~g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      +++++|+|++|++|.+.++.+... |++|+++++++++  .+.+ ++   .+.. ..+  |-.+ +.+...       .+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAAD-GFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999988887774 9999999987766  4333 22   2322 222  2211 111111       23


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        81 ~iD~lv~nAg   90 (258)
T 3a28_C           81 GFDVLVNNAG   90 (258)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.41  E-value=0.012  Score=49.77  Aligned_cols=43  Identities=26%  Similarity=0.457  Sum_probs=36.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      ..+++++|+|++|++|.+.++.+... |++|+++++++++.+.+
T Consensus        16 l~~k~vlVTGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~   58 (303)
T 1yxm_A           16 LQGQVAIVTGGATGIGKAIVKELLEL-GSNVVIASRKLERLKSA   58 (303)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            35789999999999999988888874 99999999988776544

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.40  E-value=0.0076  Score=50.73  Aligned_cols=42  Identities=26%  Similarity=0.440  Sum_probs=36.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~   68 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKM-GAHVVVTARSKETLQKV   68 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            4789999999999999999888774 99999999998876654

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=96.40  E-value=0.033  Score=46.40  Aligned_cols=95  Identities=22%  Similarity=0.261  Sum_probs=65.0

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe--eCCCccc---ccCCCccc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTKENI---EDLPEKFD  216 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~~~~---~~~~~~~d  216 (284)
                      .+...++.++++||-+|+  +.|..+..+++.  +.+|+.++.+++.++.+++.-....+  +....+.   ....+.||
T Consensus        37 il~~l~l~~g~~VLDlGc--GtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD  112 (261)
T 3iv6_A           37 DIFLENIVPGSTVAVIGA--STRFLIEKALER--GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFD  112 (261)
T ss_dssp             HHHTTTCCTTCEEEEECT--TCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCS
T ss_pred             HHHhcCCCCcCEEEEEeC--cchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCcc
Confidence            345667889999999993  568888888875  78999999999999988764322121  2111111   12246799


Q ss_pred             EEEeCCC--C---------cHHHHHhhccCCEEEEE
Q 023273          217 VVFDAVG--Q---------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       217 ~vid~~g--~---------~~~~~~~l~~~G~~v~~  241 (284)
                      +|+.+..  .         +..+.++| |+|++++.
T Consensus       113 ~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS  147 (261)
T 3iv6_A          113 FVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS  147 (261)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             EEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence            9987543  1         24566788 99999865

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.38  E-value=0.0062  Score=51.13  Aligned_cols=42  Identities=21%  Similarity=0.410  Sum_probs=36.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   46 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQE-GANVTITGRSSERLEET   46 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5789999999999999988888874 99999999988876554

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.38  E-value=0.011  Score=50.54  Aligned_cols=86  Identities=21%  Similarity=0.327  Sum_probs=64.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC----
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~----  224 (284)
                      -.|.+|.|+| .|.+|...++.++.. |.+|++.++++++ +.+.+.|... .     ++.+..+..|+|+.+...    
T Consensus       140 l~g~~vgIiG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~-~~~~~~g~~~-~-----~l~ell~~aDvV~l~~p~~~~t  210 (307)
T 1wwk_A          140 LEGKTIGIIG-FGRIGYQVAKIANAL-GMNILLYDPYPNE-ERAKEVNGKF-V-----DLETLLKESDVVTIHVPLVEST  210 (307)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCH-HHHHHTTCEE-C-----CHHHHHHHCSEEEECCCCSTTT
T ss_pred             cCCceEEEEc-cCHHHHHHHHHHHHC-CCEEEEECCCCCh-hhHhhcCccc-c-----CHHHHHhhCCEEEEecCCChHH
Confidence            3578999999 899999999999984 9999999998776 4566777532 1     223334578998887652    


Q ss_pred             ---c-HHHHHhhccCCEEEEEcC
Q 023273          225 ---C-DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       225 ---~-~~~~~~l~~~G~~v~~g~  243 (284)
                         . ...+..|++++.++.++-
T Consensus       211 ~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          211 YHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             TTCBCHHHHHHSCTTCEEEECSC
T ss_pred             hhhcCHHHHhcCCCCeEEEECCC
Confidence               1 467788999988887753

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=96.38  E-value=0.017  Score=48.30  Aligned_cols=96  Identities=15%  Similarity=0.141  Sum_probs=65.0

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChhhHHHHHHc-----CCc--EEeeCCCcccccCCCcc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSL-----GAD--LAIDYTKENIEDLPEKF  215 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~~~-----g~~--~~~~~~~~~~~~~~~~~  215 (284)
                      ....+.++++||-+| +| .|..+..+++.. .+.+++.++.+++..+.+++.     |..  .++..+... ....+.+
T Consensus       104 ~~~~~~~~~~VLD~G-~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~f  180 (275)
T 1yb2_A          104 MRCGLRPGMDILEVG-VG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMY  180 (275)
T ss_dssp             --CCCCTTCEEEEEC-CT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCE
T ss_pred             HHcCCCCcCEEEEec-CC-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCc
Confidence            456788999999998 44 577777777763 267999999999988877643     422  222222111 1113469


Q ss_pred             cEEEeCCCC----cHHHHHhhccCCEEEEEc
Q 023273          216 DVVFDAVGQ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       216 d~vid~~g~----~~~~~~~l~~~G~~v~~g  242 (284)
                      |+|+.....    ++.+.+.|+++|++++..
T Consensus       181 D~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~  211 (275)
T 1yb2_A          181 DAVIADIPDPWNHVQKIASMMKPGSVATFYL  211 (275)
T ss_dssp             EEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             cEEEEcCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            999876554    377888999999998765

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.37  E-value=0.0026  Score=50.37  Aligned_cols=92  Identities=17%  Similarity=0.209  Sum_probs=58.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCC--C-cccccCCCcccEEEeCCCCc--
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYT--K-ENIEDLPEKFDVVFDAVGQC--  225 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~--~-~~~~~~~~~~d~vid~~g~~--  225 (284)
                      +++|+|+|++|.+|...++.+... |.+|+++++++++.......+. .++..+  + +.+.+.-+++|++|+++|..  
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~   80 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQAADVDKTVAGQDAVIVLLGTRND   80 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCGGGSCSSSCCCS-EEEESCTTSHHHHHHHHTTCSEEEECCCCTTC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeChhhcccccCCce-EEEEecCCCHHHHHHHHcCCCEEEECccCCCC
Confidence            368999999999999999988884 8999999998776532111111 222221  1 12333345799999998731  


Q ss_pred             -----------HHHHHhhcc--CCEEEEEcCC
Q 023273          226 -----------DKALKAVKE--GGRVVSIIGS  244 (284)
Q Consensus       226 -----------~~~~~~l~~--~G~~v~~g~~  244 (284)
                                 ..+++.+.+  .++++.++..
T Consensus        81 ~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           81 LSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             CCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence                       233343433  3688887643

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.37  E-value=0.0087  Score=52.08  Aligned_cols=39  Identities=26%  Similarity=0.416  Sum_probs=33.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      -.|+++||+|+++++|.+.++.+... |++|+++++++++
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~   81 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKD-GANIVIAAKTAQP   81 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESCCSC
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHC-CCEEEEEECChhh
Confidence            36889999999999999988887774 9999999987664

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.37  E-value=0.019  Score=47.27  Aligned_cols=71  Identities=21%  Similarity=0.373  Sum_probs=49.0

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe-eCCCcccccC---CCcccEEEeCCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKENIEDL---PEKFDVVFDAVG  223 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~---~~~~d~vid~~g  223 (284)
                      ...+++++|+|++|++|.+.++.+... |++|++++++++..   ++++....+ |- .+.....   ..++|++|+++|
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~---~~~~~~~~~~D~-~~~~~~~~~~~~~iD~lv~~Ag   90 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQE-GAEVTICARNEELL---KRSGHRYVVCDL-RKDLDLLFEKVKEVDILVLNAG   90 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHH---HHTCSEEEECCT-TTCHHHHHHHSCCCSEEEECCC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHH---HhhCCeEEEeeH-HHHHHHHHHHhcCCCEEEECCC
Confidence            346889999999999999998888874 99999999987443   344422222 22 1111111   237999999987

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.36  E-value=0.0082  Score=49.02  Aligned_cols=73  Identities=16%  Similarity=0.283  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcC--CeEEEEeCChhhHHHHHHc-CCc-EEe--eCCC-cccccC-------CC--
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSL-GAD-LAI--DYTK-ENIEDL-------PE--  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~~~~~~~~~~~~-g~~-~~~--~~~~-~~~~~~-------~~--  213 (284)
                      .+++++|+|++|++|.+.++.+... |  ++|+++++++++.+.+++. +.. .++  |-.+ +.+...       .+  
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~-g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKD-KNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTC-TTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhc-CCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            4678999999999999988888774 8  9999999998887776655 221 222  2111 111111       11  


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        81 ~id~li~~Ag   90 (250)
T 1yo6_A           81 GLSLLINNAG   90 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCc
Confidence            7999999886

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.36  E-value=0.0099  Score=49.31  Aligned_cols=73  Identities=22%  Similarity=0.287  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEE-eCChhhHHHHH----HcCCc-EEeeCC--C-cccccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLLR----SLGAD-LAIDYT--K-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~~~~~----~~g~~-~~~~~~--~-~~~~~~-------~~  213 (284)
                      .++++||+|++|++|.+.++..... |++|+++ .+++++.+.+.    +.+.. ..+.-+  + +.....       .+
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~-G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAEN-GYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988888774 9999987 77776655442    23432 222211  1 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      .+|++|+++|
T Consensus        82 ~id~lv~nAg   91 (258)
T 3oid_A           82 RLDVFVNNAA   91 (258)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999987

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.35  E-value=0.004  Score=51.55  Aligned_cols=69  Identities=13%  Similarity=0.038  Sum_probs=47.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH---cCCc-EEeeCCCcccccC-------CCcccEEEe
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS---LGAD-LAIDYTKENIEDL-------PEKFDVVFD  220 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~---~g~~-~~~~~~~~~~~~~-------~~~~d~vid  220 (284)
                      +++||+|++|++|.+.++.+... |++|+++++++++.+.+.+   .+.. ..+  +.+.....       .+++|++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEA-GHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHT-TCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence            47899999999999998888874 9999999998777655432   2322 222  22222211       247999999


Q ss_pred             CCC
Q 023273          221 AVG  223 (284)
Q Consensus       221 ~~g  223 (284)
                      ++|
T Consensus        79 nAg   81 (254)
T 1zmt_A           79 NDI   81 (254)
T ss_dssp             ECC
T ss_pred             CCC
Confidence            876

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.35  E-value=0.0066  Score=50.81  Aligned_cols=42  Identities=21%  Similarity=0.325  Sum_probs=36.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   46 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFARE-GAKVTITGRHAERLEET   46 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5788999999999999988888774 99999999988876654

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.35  E-value=0.01  Score=49.32  Aligned_cols=43  Identities=30%  Similarity=0.382  Sum_probs=35.8

Q ss_pred             CCCCEEEEEcCCc-hHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          149 SAGKSILVLGGAG-GVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       149 ~~g~~vlI~ga~g-~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      -.+++++|+|++| ++|.+.++..... |++|+++++++++.+.+
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~   63 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHERRLGET   63 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCHHHHHHH
Confidence            4578999999875 8999988887774 99999999988876554

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.34  E-value=0.0079  Score=49.88  Aligned_cols=44  Identities=18%  Similarity=0.219  Sum_probs=35.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcC---CeEEEEeCChhhHHHHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFG---ASKVAATSSTAKLDLLR  193 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g---~~vi~~~~~~~~~~~~~  193 (284)
                      ..+++++|+|++|++|.+.++.+... |   ++|+++++++++.+.++
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~-G~~~~~V~~~~r~~~~~~~~~   65 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNL-PQPPQHLFTTCRNREQAKELE   65 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTS-SSCCSEEEEEESCTTSCHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhc-CCCCcEEEEEecChhhhHHHH
Confidence            45789999999999999988888774 7   89999999877654443

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.32  E-value=0.012  Score=48.25  Aligned_cols=41  Identities=20%  Similarity=0.212  Sum_probs=35.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      +++++|+|++|++|...+..+... |++|+++++++++.+.+
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~   42 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLAR-GDRVAALDLSAETLEET   42 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            578999999999999988888774 89999999988776554

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.32  E-value=0.0069  Score=51.43  Aligned_cols=42  Identities=21%  Similarity=0.417  Sum_probs=36.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .++++||+|++|++|.+.++.+... |++|+++++++++.+.+
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~   66 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKE-GAQVTITGRNEDRLEET   66 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5789999999999999988888874 99999999988776544

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.32  E-value=0.014  Score=50.88  Aligned_cols=87  Identities=23%  Similarity=0.355  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC----
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~----  224 (284)
                      -.|++|.|+| .|.+|...++.++.. |.+|++.++++.+.+.+++.|...+     .++.+..+..|+|+-++..    
T Consensus       162 l~gktvGIIG-~G~IG~~vA~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell~~aDvV~l~~Plt~~t  234 (351)
T 3jtm_A          162 LEGKTIGTVG-AGRIGKLLLQRLKPF-GCNLLYHDRLQMAPELEKETGAKFV-----EDLNEMLPKCDVIVINMPLTEKT  234 (351)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHGGG-CCEEEEECSSCCCHHHHHHHCCEEC-----SCHHHHGGGCSEEEECSCCCTTT
T ss_pred             ccCCEEeEEE-eCHHHHHHHHHHHHC-CCEEEEeCCCccCHHHHHhCCCeEc-----CCHHHHHhcCCEEEECCCCCHHH
Confidence            3588999999 899999999999994 9999999988766666667665321     1233334567887776541    


Q ss_pred             ---c-HHHHHhhccCCEEEEEc
Q 023273          225 ---C-DKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ---~-~~~~~~l~~~G~~v~~g  242 (284)
                         . ...+..|+++..+|.++
T Consensus       235 ~~li~~~~l~~mk~gailIN~a  256 (351)
T 3jtm_A          235 RGMFNKELIGKLKKGVLIVNNA  256 (351)
T ss_dssp             TTCBSHHHHHHSCTTEEEEECS
T ss_pred             HHhhcHHHHhcCCCCCEEEECc
Confidence               1 56677777777777664

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=96.31  E-value=0.016  Score=47.99  Aligned_cols=73  Identities=25%  Similarity=0.371  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCChh---hHHHHH-HcCCcEEeeC--CC-cccccC-------CC
Q 023273          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTA---KLDLLR-SLGADLAIDY--TK-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~~---~~~~~~-~~g~~~~~~~--~~-~~~~~~-------~~  213 (284)
                      .+++++|+|++  |++|.+.++.+... |++|++++++++   ..+.+. +.+....+.-  .+ +.+...       .+
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEA-GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            47899999998  99999988887774 999999998775   333332 2332223322  11 111111       23


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        86 ~iD~lv~~Ag   95 (261)
T 2wyu_A           86 GLDYLVHAIA   95 (261)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.31  E-value=0.0098  Score=48.89  Aligned_cols=73  Identities=26%  Similarity=0.379  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC-hhhHHHHH----HcCCc-EEe--eCCC-cccccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-TAKLDLLR----SLGAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~-~~~~~~~~----~~g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      .+++++|+|++|++|...++.+... |++|++++++ +++.+.+.    +.+.. ..+  |-.+ +.+...       .+
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARA-GAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999998888874 9999999997 66654432    22322 122  2111 111111       13


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        85 ~id~vi~~Ag   94 (258)
T 3afn_B           85 GIDVLINNAG   94 (258)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.31  E-value=0.015  Score=48.72  Aligned_cols=36  Identities=28%  Similarity=0.388  Sum_probs=31.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      -.++++||+|+++++|.+.++..... |++|++++++
T Consensus         8 l~~k~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~   43 (281)
T 3s55_A            8 FEGKTALITGGARGMGRSHAVALAEA-GADIAICDRC   43 (281)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCC
Confidence            35789999999999999988888874 9999999986

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.31  E-value=0.0065  Score=53.26  Aligned_cols=91  Identities=16%  Similarity=0.289  Sum_probs=65.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC-cccccCCCcccEEEeCCCC---cH
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIEDLPEKFDVVFDAVGQ---CD  226 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~d~vid~~g~---~~  226 (284)
                      ..+|+|+|+ |.+|..+++.+..  ..+|.+++++.++.+.+++......+|..+ +.+.+.-+++|+|++|++.   ..
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~--~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~~~   92 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD--EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFK   92 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT--TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc--CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcccch
Confidence            357999995 9999998888765  578999999999988887654333344332 2233334689999999984   35


Q ss_pred             HHHHhhccCCEEEEEcCC
Q 023273          227 KALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       227 ~~~~~l~~~G~~v~~g~~  244 (284)
                      .+-.|+..+=.++.++..
T Consensus        93 v~~~~~~~g~~yvD~s~~  110 (365)
T 3abi_A           93 SIKAAIKSKVDMVDVSFM  110 (365)
T ss_dssp             HHHHHHHHTCEEEECCCC
T ss_pred             HHHHHHhcCcceEeeecc
Confidence            666788888888877643

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.31  E-value=0.011  Score=49.04  Aligned_cols=73  Identities=23%  Similarity=0.372  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCCc-ccccC--------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTKE-NIEDL--------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~~-~~~~~--------~~  213 (284)
                      .+++++|+|++|++|...++.+... |++|+++++++++.+.+.    +.+.. ..+  |-.+. .+...        .+
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGF-GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5689999999999999999888874 999999999887665432    22322 222  21111 11111        16


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        92 ~id~li~~Ag  101 (266)
T 1xq1_A           92 KLDILINNLG  101 (266)
T ss_dssp             CCSEEEEECC
T ss_pred             CCcEEEECCC
Confidence            7999999987

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.31  E-value=0.014  Score=49.13  Aligned_cols=36  Identities=28%  Similarity=0.300  Sum_probs=31.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      -.++++||+|+++++|.+.++..... |++|++++++
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~-G~~V~~~~~~   44 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQE-GADIIAVDIC   44 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEecc
Confidence            35789999999999999988888774 9999999876

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=96.31  E-value=0.015  Score=47.46  Aligned_cols=72  Identities=19%  Similarity=0.327  Sum_probs=48.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCC-------eEEEEeCChhhHHHHH-Hc---CCc-EEe--eCCC-cccccC----
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGA-------SKVAATSSTAKLDLLR-SL---GAD-LAI--DYTK-ENIEDL----  211 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~-------~vi~~~~~~~~~~~~~-~~---g~~-~~~--~~~~-~~~~~~----  211 (284)
                      +++++|+|++|++|...++.+... |.       +|+++++++++.+.+. ++   +.. ..+  |-.+ +.+...    
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~-G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARA-ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHH-TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHh-cCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            568999999999999988877774 88       8999999887765543 22   322 122  2111 111111    


Q ss_pred             ---CCcccEEEeCCC
Q 023273          212 ---PEKFDVVFDAVG  223 (284)
Q Consensus       212 ---~~~~d~vid~~g  223 (284)
                         .+++|++|+++|
T Consensus        81 ~~~~g~id~li~~Ag   95 (244)
T 2bd0_A           81 VERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHHTSCCSEEEECCC
T ss_pred             HHhCCCCCEEEEcCC
Confidence               247999999987

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.30  E-value=0.011  Score=49.36  Aligned_cols=73  Identities=23%  Similarity=0.409  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH----HHcCCc-EEe--eCCC-cccccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~----~~~g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      .++++||+|+++++|.+.++..... |++|+++++ ++++.+.+    ++.+.. ..+  |-.+ +.....       .+
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAA-GAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988887774 999999887 55544433    233432 222  2211 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus       106 ~id~lv~nAg  115 (269)
T 4dmm_A          106 RLDVLVNNAG  115 (269)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=96.29  E-value=0.015  Score=47.90  Aligned_cols=92  Identities=20%  Similarity=0.228  Sum_probs=63.4

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC----C-cEEeeCCCcccccCCCcccEEEe
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG----A-DLAIDYTKENIEDLPEKFDVVFD  220 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g----~-~~~~~~~~~~~~~~~~~~d~vid  220 (284)
                      ..+.++.+||-+| +| .|..+..+++.  +.+++.++.+++..+.+++.-    . ..++..+...+.-..+.+|+|+.
T Consensus        35 ~~~~~~~~vLDiG-~G-~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~  110 (263)
T 2yqz_A           35 HPKGEEPVFLELG-VG-TGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIV  110 (263)
T ss_dssp             CCSSSCCEEEEET-CT-TSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEE
T ss_pred             cCCCCCCEEEEeC-Cc-CCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEE
Confidence            3567899999999 44 37777777775  789999999999888887541    1 12222222222222457999987


Q ss_pred             CCC-----C----cHHHHHhhccCCEEEEE
Q 023273          221 AVG-----Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       221 ~~g-----~----~~~~~~~l~~~G~~v~~  241 (284)
                      ...     +    +..+.+.|+++|++++.
T Consensus       111 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~  140 (263)
T 2yqz_A          111 VHLWHLVPDWPKVLAEAIRVLKPGGALLEG  140 (263)
T ss_dssp             ESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence            543     2    26778899999999876

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.29  E-value=0.014  Score=48.90  Aligned_cols=35  Identities=23%  Similarity=0.272  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~  184 (284)
                      -.++++||+|+++++|.+.++..... |++|+++++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~-G~~V~~~~r   47 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAE-GADIIACDI   47 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEec
Confidence            46889999999999999988888774 999999987

>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}

Probab=96.29  E-value=0.025  Score=45.87  Aligned_cols=96  Identities=23%  Similarity=0.254  Sum_probs=61.6

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhh----HHHHHHcCCcEEeeCCCcc---cccCCCcc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAK----LDLLRSLGADLAIDYTKEN---IEDLPEKF  215 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~----~~~~~~~g~~~~~~~~~~~---~~~~~~~~  215 (284)
                      ....++++++||-+| +|. |..+..+++..+ +.+++.++.+++.    .+.++.......+..+...   +....+.+
T Consensus        71 ~~~~~~~~~~vLDlG-~G~-G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~  148 (233)
T 2ipx_A           71 DQIHIKPGAKVLYLG-AAS-GTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMV  148 (233)
T ss_dssp             SCCCCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCE
T ss_pred             heecCCCCCEEEEEc-ccC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcE
Confidence            345688999999999 444 778888888742 3789999998653    3334443222222222221   22234579


Q ss_pred             cEEEeCCCCc-------HHHHHhhccCCEEEEE
Q 023273          216 DVVFDAVGQC-------DKALKAVKEGGRVVSI  241 (284)
Q Consensus       216 d~vid~~g~~-------~~~~~~l~~~G~~v~~  241 (284)
                      |+|+.....+       ..+.+.|+++|++++.
T Consensus       149 D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~  181 (233)
T 2ipx_A          149 DVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS  181 (233)
T ss_dssp             EEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence            9998765432       3477899999999874

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.28  E-value=0.014  Score=48.73  Aligned_cols=36  Identities=25%  Similarity=0.268  Sum_probs=31.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      -.++++||+|+++++|.+.++.+... |++|++++++
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~   46 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAAD-GADIIAVDLC   46 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecc
Confidence            36789999999999999988888774 9999999876

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.27  E-value=0.01  Score=50.01  Aligned_cols=37  Identities=24%  Similarity=0.470  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      .++++||+|+++++|.+.++..... |++|++++++++
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~   44 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAAD-GANVALVAKSAE   44 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTT-TCEEEEEESCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECChh
Confidence            5789999999999999988888774 999999998765

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.27  E-value=0.0083  Score=50.13  Aligned_cols=71  Identities=21%  Similarity=0.326  Sum_probs=47.1

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe--eCCC-cccccC-------CCccc
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTK-ENIEDL-------PEKFD  216 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~-~~~~~~-------~~~~d  216 (284)
                      ....++++||+|+++++|.+.++..... |++|+++++++++..     +....+  |-.+ +.....       .+++|
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   83 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRY-GAKVVSVSLDEKSDV-----NVSDHFKIDVTNEEEVKEAVEKTTKKYGRID   83 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCC--CT-----TSSEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCchhcc-----CceeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            3457899999999999999988888774 999999998765542     111122  2211 111111       24799


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      ++|+++|
T Consensus        84 ~lv~nAg   90 (269)
T 3vtz_A           84 ILVNNAG   90 (269)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=96.27  E-value=0.011  Score=47.92  Aligned_cols=94  Identities=20%  Similarity=0.337  Sum_probs=64.5

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC-cEEeeCCCcccccC-CCcccEEE
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA-DLAIDYTKENIEDL-PEKFDVVF  219 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~-~~~~d~vi  219 (284)
                      ..++++++||-+| +|..|..+..+++.. +.+++.++.+++..+.+++    .+. ..++..+...+... .+.+|+|+
T Consensus        51 ~~~~~~~~vLDlG-~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~  128 (230)
T 3evz_A           51 TFLRGGEVALEIG-TGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIF  128 (230)
T ss_dssp             TTCCSSCEEEEEC-CTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEE
T ss_pred             hhcCCCCEEEEcC-CCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEE
Confidence            3467899999999 665788888888874 8899999999998877753    332 23333332112222 36799998


Q ss_pred             eCC----------------------CC------cHHHHHhhccCCEEEEE
Q 023273          220 DAV----------------------GQ------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       220 d~~----------------------g~------~~~~~~~l~~~G~~v~~  241 (284)
                      ...                      +.      ...+.+.|+++|+++++
T Consensus       129 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  178 (230)
T 3evz_A          129 SAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY  178 (230)
T ss_dssp             ECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             ECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence            541                      10      25677889999999875

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.27  E-value=0.018  Score=48.38  Aligned_cols=74  Identities=18%  Similarity=0.282  Sum_probs=49.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH----HHcCCc-EEe--eCCC-cccccC-------C
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGAD-LAI--DYTK-ENIEDL-------P  212 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~----~~~g~~-~~~--~~~~-~~~~~~-------~  212 (284)
                      ..++++||+|+++++|.+.++.+... |++|+++++ ++++.+.+    ++.+.. ..+  |-.+ +.....       .
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAAS-GFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999988888874 999999985 65554433    333432 222  2211 111111       2


Q ss_pred             CcccEEEeCCC
Q 023273          213 EKFDVVFDAVG  223 (284)
Q Consensus       213 ~~~d~vid~~g  223 (284)
                      +++|++|+++|
T Consensus       106 g~iD~lvnnAg  116 (280)
T 4da9_A          106 GRIDCLVNNAG  116 (280)
T ss_dssp             SCCCEEEEECC
T ss_pred             CCCCEEEECCC
Confidence            47999999887

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.27  E-value=0.017  Score=50.27  Aligned_cols=93  Identities=22%  Similarity=0.216  Sum_probs=59.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH--HHHHHcCCcEEeeCC---C-cccccCCCcccEEEeCCCC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL--DLLRSLGADLAIDYT---K-ENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~--~~~~~~g~~~~~~~~---~-~~~~~~~~~~d~vid~~g~  224 (284)
                      +.+|+|+|++|.+|...++.+... |.+|+++++++++.  +.+.......++.-+   + +.+...-+++|+||.+++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~   83 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAV-GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   83 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence            568999999999999999888774 89999999987665  333332212222222   1 1233334579999977653


Q ss_pred             c--------HHHHHhhcc-C--CEEEEEcCC
Q 023273          225 C--------DKALKAVKE-G--GRVVSIIGS  244 (284)
Q Consensus       225 ~--------~~~~~~l~~-~--G~~v~~g~~  244 (284)
                      .        ..+++.+.. +  +++|.++..
T Consensus        84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             TTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             CCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            1        334444433 2  589988654

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.26  E-value=0.0073  Score=49.81  Aligned_cols=95  Identities=19%  Similarity=0.229  Sum_probs=63.6

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHc----CCc---EEeeCCCcc-cccC--CCc
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL----GAD---LAIDYTKEN-IEDL--PEK  214 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~-~~~~--~~~  214 (284)
                      ....++++||-+| +| .|..+..+++.+. +.+++.++.+++..+.+++.    +..   .++..+... +...  .+.
T Consensus        59 ~~~~~~~~VLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~  136 (248)
T 3tfw_A           59 VRLTQAKRILEIG-TL-GGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPA  136 (248)
T ss_dssp             HHHHTCSEEEEEC-CT-TSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCC
T ss_pred             HhhcCCCEEEEec-CC-chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCC
Confidence            3456789999999 44 4888888888754 57999999999988877642    432   222222111 2222  237


Q ss_pred             ccEEEeCCC--C----cHHHHHhhccCCEEEEEc
Q 023273          215 FDVVFDAVG--Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       215 ~d~vid~~g--~----~~~~~~~l~~~G~~v~~g  242 (284)
                      ||+|+-...  .    ++.+.++|+++|.++.-.
T Consensus       137 fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          137 FDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             eEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            999884332  1    367889999999998653

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.26  E-value=0.0084  Score=50.02  Aligned_cols=37  Identities=24%  Similarity=0.460  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      .|+++||+|+++++|++.++..... |++|+++.++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~   46 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLEL-GAQVLTTARARP   46 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHc-CCEEEEEECCch
Confidence            6899999999999999988887774 999999998644

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.26  E-value=0.012  Score=49.07  Aligned_cols=73  Identities=16%  Similarity=0.322  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH----HHcCCc-EEeeCCCcc---cccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGAD-LAIDYTKEN---IEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~----~~~g~~-~~~~~~~~~---~~~~-------~~  213 (284)
                      .+++++|+|++|++|.+.++..... |++|+++.+ ++++.+.+    ++.+.. .++..+-.+   ....       .+
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASM-GLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999988887774 999999998 44443333    333432 222222111   1111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus       107 ~id~li~nAg  116 (271)
T 4iin_A          107 GLSYLVNNAG  116 (271)
T ss_dssp             SCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=96.25  E-value=0.031  Score=45.90  Aligned_cols=36  Identities=22%  Similarity=0.335  Sum_probs=31.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      ++++|+|++|++|.+.++.+... |++|+++++++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~   37 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAA-GHQIVGIDIRDAE   37 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCchh
Confidence            47999999999999999888774 9999999987654

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.25  E-value=0.017  Score=49.02  Aligned_cols=36  Identities=25%  Similarity=0.295  Sum_probs=31.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      -.++++||+|+++++|.+.++..... |++|++++++
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~   61 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLARE-GADIIAIDVC   61 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEecc
Confidence            35789999999999999988887774 9999999876

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}

Probab=96.24  E-value=0.024  Score=46.48  Aligned_cols=94  Identities=21%  Similarity=0.231  Sum_probs=64.4

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC---cEEeeCCCcccccCCCcccEEEeC
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA---DLAIDYTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~d~vid~  221 (284)
                      .....++.+||-+| +| .|..+..+++. +..+++.++.+++..+.+++...   ..++..+...+....+.+|+|+.+
T Consensus        39 ~~~~~~~~~vLD~G-cG-~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~  115 (253)
T 3g5l_A           39 MLPDFNQKTVLDLG-CG-FGWHCIYAAEH-GAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSS  115 (253)
T ss_dssp             TCCCCTTCEEEEET-CT-TCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEE
T ss_pred             hhhccCCCEEEEEC-CC-CCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEc
Confidence            44556899999999 33 47778888876 34499999999999888876432   122222222222224679999875


Q ss_pred             CC-----C----cHHHHHhhccCCEEEEE
Q 023273          222 VG-----Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       222 ~g-----~----~~~~~~~l~~~G~~v~~  241 (284)
                      ..     .    +..+.+.|+++|++++.
T Consensus       116 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~  144 (253)
T 3g5l_A          116 LALHYIASFDDICKKVYINLKSSGSFIFS  144 (253)
T ss_dssp             SCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence            43     2    26788899999999875

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.24  E-value=0.016  Score=48.93  Aligned_cols=42  Identities=21%  Similarity=0.172  Sum_probs=35.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEe-CChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~-~~~~~~~~~  192 (284)
                      .+++++|+|+++++|.+.++.+... |++|++++ +++++.+.+
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~~r~~~~~~~~   50 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAE-GYAVCLHYHRSAAEANAL   50 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHH
Confidence            5789999999999999998888874 99999999 888766544

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=96.24  E-value=0.014  Score=48.38  Aligned_cols=73  Identities=26%  Similarity=0.418  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCCh---hhHHHHH-HcCCcEEe--eCCCc-cccc-------CCC
Q 023273          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSST---AKLDLLR-SLGADLAI--DYTKE-NIED-------LPE  213 (284)
Q Consensus       150 ~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~---~~~~~~~-~~g~~~~~--~~~~~-~~~~-------~~~  213 (284)
                      .++++||+|++  |++|.+.++.+... |++|+++++++   +..+.+. +.+....+  |-.+. .+..       ..+
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            57899999998  99999988888774 99999999876   2333332 22322222  22211 1111       124


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        87 ~iD~lv~~Ag   96 (265)
T 1qsg_A           87 KFDGFVHSIG   96 (265)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=96.24  E-value=0.011  Score=49.55  Aligned_cols=71  Identities=20%  Similarity=0.327  Sum_probs=48.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCC---cEEe--eCCCc-ccc----cC---CCcccE
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGA---DLAI--DYTKE-NIE----DL---PEKFDV  217 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~---~~~~--~~~~~-~~~----~~---~~~~d~  217 (284)
                      +++||+|++|++|.+.++.+... |++|+++++++++.+.+. ++..   ...+  |-.+. .+.    ..   .+.+|+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEA-GWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            78999999999999988888874 999999999988776553 3321   1222  21111 111    11   246899


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +|+++|
T Consensus       101 lvnnAG  106 (272)
T 2nwq_A          101 LINNAG  106 (272)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.24  E-value=0.0085  Score=50.98  Aligned_cols=91  Identities=23%  Similarity=0.247  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHH-HHcCCc--EEeeCCCcccccCCCcccEEEeCCCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGAD--LAIDYTKENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~-~~~g~~--~~~~~~~~~~~~~~~~~d~vid~~g~  224 (284)
                      -.+++++|+| +|++|.+++..+... |+ +|+++.++.+|.+.+ ++++..  .+++.  +...+...++|++|+|++.
T Consensus       139 l~~~~vlVlG-aGg~g~aia~~L~~~-G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~~aDivIn~t~~  214 (297)
T 2egg_A          139 LDGKRILVIG-AGGGARGIYFSLLST-AAERIDMANRTVEKAERLVREGDERRSAYFSL--AEAETRLAEYDIIINTTSV  214 (297)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTT-TCSEEEEECSSHHHHHHHHHHSCSSSCCEECH--HHHHHTGGGCSEEEECSCT
T ss_pred             CCCCEEEEEC-cHHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHhhhccCceeeH--HHHHhhhccCCEEEECCCC
Confidence            3678999999 699999998888885 76 899999998886555 455541  22221  1222334679999999874


Q ss_pred             cH--------HHHHhhccCCEEEEEcC
Q 023273          225 CD--------KALKAVKEGGRVVSIIG  243 (284)
Q Consensus       225 ~~--------~~~~~l~~~G~~v~~g~  243 (284)
                      ..        .....++++..++.+..
T Consensus       215 ~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          215 GMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             TCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             CCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            21        12245666666666654

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.23  E-value=0.0076  Score=49.28  Aligned_cols=95  Identities=18%  Similarity=0.208  Sum_probs=64.5

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHc----CCc---EEeeCCCcc-cccC-----
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL----GAD---LAIDYTKEN-IEDL-----  211 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~-~~~~-----  211 (284)
                      ....++++||.+| +| .|..+..+++... +.+++.++.+++..+.+++.    +..   .++..+... +...     
T Consensus        56 ~~~~~~~~VLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~  133 (239)
T 2hnk_A           56 TKISGAKRIIEIG-TF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKS  133 (239)
T ss_dssp             HHHHTCSEEEEEC-CT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSS
T ss_pred             HHhhCcCEEEEEe-CC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcc
Confidence            4556789999999 44 6888888988743 57999999999988777643    432   122221111 1111     


Q ss_pred             ----------C-CcccEEEeCCCC------cHHHHHhhccCCEEEEEc
Q 023273          212 ----------P-EKFDVVFDAVGQ------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       212 ----------~-~~~d~vid~~g~------~~~~~~~l~~~G~~v~~g  242 (284)
                                . +.+|+|+.....      +..+.++|+++|+++...
T Consensus       134 ~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          134 APSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             CCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                      1 579999876552      277889999999998753

>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}

Probab=96.23  E-value=0.014  Score=46.63  Aligned_cols=99  Identities=17%  Similarity=0.159  Sum_probs=65.9

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChhhHHHHHHc----CC--cEEeeCCCcccccCCCcc
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSL----GA--DLAIDYTKENIEDLPEKF  215 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~~~----g~--~~~~~~~~~~~~~~~~~~  215 (284)
                      +....+.++.+||-+| +| .|..+..+++.. ...+++.++.+++..+.+++.    +.  ..++..+...+....+.+
T Consensus        30 ~~~~~~~~~~~vLDiG-~G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~f  107 (219)
T 3dh0_A           30 LKEFGLKEGMTVLDVG-TG-AGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTV  107 (219)
T ss_dssp             HHHHTCCTTCEEEESS-CT-TCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCE
T ss_pred             HHHhCCCCCCEEEEEe-cC-CCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCe
Confidence            3455778899999998 33 477777777763 247999999999888777542    22  222332222222224569


Q ss_pred             cEEEeCCC-----C----cHHHHHhhccCCEEEEEcC
Q 023273          216 DVVFDAVG-----Q----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       216 d~vid~~g-----~----~~~~~~~l~~~G~~v~~g~  243 (284)
                      |+|+....     .    +..+.+.|+++|++++...
T Consensus       108 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~  144 (219)
T 3dh0_A          108 DFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDW  144 (219)
T ss_dssp             EEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEe
Confidence            99987543     1    2678899999999998753

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.23  E-value=0.012  Score=48.95  Aligned_cols=73  Identities=29%  Similarity=0.489  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCC---cEEeeCC--C-cccccC-------CCcc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA---DLAIDYT--K-ENIEDL-------PEKF  215 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~---~~~~~~~--~-~~~~~~-------~~~~  215 (284)
                      .+++++|+|++|++|...++.+... |++|+++++++++.+.+ ++++.   ..++..+  + +.+...       .+++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRY-GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999988888774 99999999987765544 33332   1222211  1 111111       2379


Q ss_pred             cEEEeCCC
Q 023273          216 DVVFDAVG  223 (284)
Q Consensus       216 d~vid~~g  223 (284)
                      |++|+++|
T Consensus        94 d~li~~Ag  101 (278)
T 2bgk_A           94 DIMFGNVG  101 (278)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            99999887

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=96.23  E-value=0.017  Score=48.52  Aligned_cols=74  Identities=20%  Similarity=0.354  Sum_probs=48.2

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCChh---hHHHHHH-cCCcEEe--eCCC-cccccC-------C
Q 023273          149 SAGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTA---KLDLLRS-LGADLAI--DYTK-ENIEDL-------P  212 (284)
Q Consensus       149 ~~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~~---~~~~~~~-~g~~~~~--~~~~-~~~~~~-------~  212 (284)
                      ..+++++|+|++  |++|.+.++.+... |++|++++++++   ..+.+.+ .+....+  |-.+ +.+...       .
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHRE-GAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            357899999998  89999988888774 999999998775   2333322 3322222  2221 111111       3


Q ss_pred             CcccEEEeCCC
Q 023273          213 EKFDVVFDAVG  223 (284)
Q Consensus       213 ~~~d~vid~~g  223 (284)
                      +++|++|+++|
T Consensus        98 g~iD~lv~~Ag  108 (285)
T 2p91_A           98 GSLDIIVHSIA  108 (285)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=96.22  E-value=0.018  Score=49.93  Aligned_cols=75  Identities=17%  Similarity=0.242  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHH-cC--CcEEe--eCCC-cccccCCCcccEEEeC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-LG--ADLAI--DYTK-ENIEDLPEKFDVVFDA  221 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~-~g--~~~~~--~~~~-~~~~~~~~~~d~vid~  221 (284)
                      -.+++|||+||+|.+|...++.+....|. +|+++++++++...+.+ +.  ....+  |-.+ +.+...-+++|+||.+
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~   98 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA   98 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence            45789999999999999988887762276 99999998887765542 22  11222  2221 1222334589999999


Q ss_pred             CC
Q 023273          222 VG  223 (284)
Q Consensus       222 ~g  223 (284)
                      ++
T Consensus        99 Aa  100 (344)
T 2gn4_A           99 AA  100 (344)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.21  E-value=0.011  Score=48.80  Aligned_cols=73  Identities=22%  Similarity=0.396  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH----HHcCCc-EEe--eCCC-cccccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~----~~~g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++ ++++.+.+    ++.+.. ..+  |-.+ +.+.+.       .+
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATE-KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999988888774 999999998 76655443    223322 122  2111 111111       23


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        85 ~id~li~~Ag   94 (261)
T 1gee_A           85 KLDVMINNAG   94 (261)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.21  E-value=0.021  Score=49.19  Aligned_cols=73  Identities=18%  Similarity=0.225  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh----hHHHHHHc------CCcEEeeCCC---cccccCCCccc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA----KLDLLRSL------GADLAIDYTK---ENIEDLPEKFD  216 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~----~~~~~~~~------g~~~~~~~~~---~~~~~~~~~~d  216 (284)
                      .+.+|||+||+|.+|...++.+... |.+|++++++..    ....++..      ....++.-+-   +.+...-+++|
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  102 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKL-NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD  102 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence            4689999999999999999888884 899999998543    23333332      2122222221   12333356899


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      +||++++
T Consensus       103 ~Vih~A~  109 (351)
T 3ruf_A          103 HVLHQAA  109 (351)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999987

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=96.21  E-value=0.022  Score=46.06  Aligned_cols=93  Identities=13%  Similarity=0.139  Sum_probs=66.1

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-cEEeeCCC-cccccC-CCcccEEEeCCCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTK-ENIEDL-PEKFDVVFDAVGQ  224 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~-~~~~~~-~~~~d~vid~~g~  224 (284)
                      +.++++||-+| +| .|..+..+++.  +.+++.++.+++.++.+++... ..++..+. +.++.. .+.+|+|+.....
T Consensus        46 ~~~~~~vLDiG-cG-~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~~  121 (226)
T 3m33_A           46 LTPQTRVLEAG-CG-HGPDAARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRRGP  121 (226)
T ss_dssp             CCTTCEEEEES-CT-TSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEESCC
T ss_pred             CCCCCeEEEeC-CC-CCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCCCH
Confidence            46889999999 33 47778888876  7899999999999988876532 23333222 222222 4679999987542


Q ss_pred             ---cHHHHHhhccCCEEEEEcCC
Q 023273          225 ---CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g~~  244 (284)
                         +..+.+.|+++|+++..+..
T Consensus       122 ~~~l~~~~~~LkpgG~l~~~~~~  144 (226)
T 3m33_A          122 TSVILRLPELAAPDAHFLYVGPR  144 (226)
T ss_dssp             SGGGGGHHHHEEEEEEEEEEESS
T ss_pred             HHHHHHHHHHcCCCcEEEEeCCc
Confidence               58899999999999966543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.21  E-value=0.013  Score=49.12  Aligned_cols=38  Identities=26%  Similarity=0.455  Sum_probs=32.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      .+++++|+|+++++|.+.++..... |++|+++++++++
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~   42 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARD-GANVAIAAKSAVA   42 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCSC
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeccchh
Confidence            5789999999999999988887774 9999999987653

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=96.21  E-value=0.018  Score=48.24  Aligned_cols=75  Identities=17%  Similarity=0.269  Sum_probs=49.6

Q ss_pred             cCCCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCCh--hhHHHHHH-cCCcEEeeCCCcc---ccc-------CC
Q 023273          148 FSAGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSST--AKLDLLRS-LGADLAIDYTKEN---IED-------LP  212 (284)
Q Consensus       148 ~~~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~--~~~~~~~~-~g~~~~~~~~~~~---~~~-------~~  212 (284)
                      ...+++++|+||+  +++|.+.++..... |++|+++++++  ++.+.+++ .+....+..+-.+   +..       ..
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHRE-GAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW  101 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHT-TCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHc-CCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence            3467899999988  56999988887774 99999999876  55555543 3332333222111   111       13


Q ss_pred             CcccEEEeCCC
Q 023273          213 EKFDVVFDAVG  223 (284)
Q Consensus       213 ~~~d~vid~~g  223 (284)
                      +.+|++|+++|
T Consensus       102 g~id~li~nAg  112 (280)
T 3nrc_A          102 DGLDAIVHSIA  112 (280)
T ss_dssp             SSCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            57999999987

>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}

Probab=96.20  E-value=0.0092  Score=45.76  Aligned_cols=93  Identities=15%  Similarity=0.080  Sum_probs=65.6

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-cEEeeCCCcccccCCCcccEEEeCCC
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      ...+.++++||-+| +| .|..+..+++. +. ++++++.+++..+.+++... ..++..+   .....+.+|+|+....
T Consensus        12 ~~~~~~~~~vLDiG-~G-~G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~   84 (170)
T 3i9f_A           12 NIFEGKKGVIVDYG-CG-NGFYCKYLLEF-AT-KLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANS   84 (170)
T ss_dssp             HHHSSCCEEEEEET-CT-TCTTHHHHHTT-EE-EEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESC
T ss_pred             hcCcCCCCeEEEEC-CC-CCHHHHHHHhh-cC-eEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccc
Confidence            34578899999999 44 47788888887 34 99999999998888876532 2222222   2223467999986543


Q ss_pred             -----C----cHHHHHhhccCCEEEEEcCC
Q 023273          224 -----Q----CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       224 -----~----~~~~~~~l~~~G~~v~~g~~  244 (284)
                           +    .+.+.+.|+++|++++....
T Consensus        85 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  114 (170)
T 3i9f_A           85 FHDMDDKQHVISEVKRILKDDGRVIIIDWR  114 (170)
T ss_dssp             STTCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             hhcccCHHHHHHHHHHhcCCCCEEEEEEcC
Confidence                 1    26788999999999987543

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=96.20  E-value=0.013  Score=46.63  Aligned_cols=93  Identities=18%  Similarity=0.205  Sum_probs=62.8

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC----cEEeeCCCcccccCCCcccEEEeCCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA----DLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      +.++++||.+| +|. |..+..+++. +..++++++.+++..+.+++...    ..++..+...+.-..+.+|+|+....
T Consensus        40 ~~~~~~vLdiG-cG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~  116 (215)
T 2pxx_A           40 LRPEDRILVLG-CGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGT  116 (215)
T ss_dssp             CCTTCCEEEET-CTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESH
T ss_pred             cCCCCeEEEEC-CCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcc
Confidence            47889999999 554 7778888876 33489999999999888876432    12232222222212357999986311


Q ss_pred             --------------------C----cHHHHHhhccCCEEEEEcC
Q 023273          224 --------------------Q----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       224 --------------------~----~~~~~~~l~~~G~~v~~g~  243 (284)
                                          .    +..+.+.|+++|++++...
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~  160 (215)
T 2pxx_A          117 LDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS  160 (215)
T ss_dssp             HHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred             hhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence                                0    2567889999999998754

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.20  E-value=0.019  Score=47.99  Aligned_cols=35  Identities=23%  Similarity=0.282  Sum_probs=30.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~  184 (284)
                      -.++++||+|+++++|.+.++..... |++|+++++
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~-G~~V~~~~r   43 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAE-GADIIAVDI   43 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEec
Confidence            35789999999999999988888774 999999987

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.19  E-value=0.012  Score=48.55  Aligned_cols=73  Identities=26%  Similarity=0.394  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh--HHHHHHcCCc-EEe--eCCC-cccccC-------CCccc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK--LDLLRSLGAD-LAI--DYTK-ENIEDL-------PEKFD  216 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~--~~~~~~~g~~-~~~--~~~~-~~~~~~-------~~~~d  216 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++  .+.+++.+.. ..+  |-.+ +.+...       .+++|
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARA-GANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999998888874 9999999887652  1222333432 222  2111 111111       23799


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      ++|+++|
T Consensus        82 ~lv~~Ag   88 (255)
T 2q2v_A           82 ILVNNAG   88 (255)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.17  E-value=0.025  Score=45.04  Aligned_cols=93  Identities=20%  Similarity=0.115  Sum_probs=65.8

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc--EEeeCCCcccccCCCcccEEEeCCC
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      ....++.+||-+| +| .|..+..+++.  +.+++.++.+++..+.+++.+..  .++..+...+ ...+.+|+|+....
T Consensus        42 ~~~~~~~~vLdiG-~G-~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~  116 (218)
T 3ou2_A           42 RAGNIRGDVLELA-SG-TGYWTRHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHW  116 (218)
T ss_dssp             TTTTSCSEEEEES-CT-TSHHHHHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESC
T ss_pred             hcCCCCCeEEEEC-CC-CCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEech
Confidence            3477888999999 44 47788888876  77999999999999988875522  2222222222 22467999987543


Q ss_pred             -----C------cHHHHHhhccCCEEEEEcC
Q 023273          224 -----Q------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       224 -----~------~~~~~~~l~~~G~~v~~g~  243 (284)
                           .      +..+.+.|+++|++++...
T Consensus       117 l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  147 (218)
T 3ou2_A          117 LAHVPDDRFEAFWESVRSAVAPGGVVEFVDV  147 (218)
T ss_dssp             GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             hhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence                 1      2567789999999998754

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.17  E-value=0.052  Score=47.59  Aligned_cols=102  Identities=15%  Similarity=0.209  Sum_probs=67.1

Q ss_pred             HHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCC----hhh---------HHHHHHcCCcEEee
Q 023273          138 TAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSS----TAK---------LDLLRSLGADLAID  202 (284)
Q Consensus       138 ta~~al~~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~----~~~---------~~~~~~~g~~~~~~  202 (284)
                      .-+.+++..+ --+..+|+|+| +|..|..+++++..+ |. ++++++++    .+|         ..++++...    .
T Consensus       178 al~~A~~i~g~~l~~~kVVv~G-AGaAG~~iAkll~~~-G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~----~  251 (388)
T 1vl6_A          178 AFLNALKLTEKKIEEVKVVVNG-IGAAGYNIVKFLLDL-GVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP----E  251 (388)
T ss_dssp             HHHHHHHHHTCCTTTCEEEEEC-CSHHHHHHHHHHHHH-TCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT----T
T ss_pred             HHHHHHHHhCCCCCCcEEEEEC-CCHHHHHHHHHHHhC-CCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc----c
Confidence            3455555433 34667999999 899999999999997 76 89999987    554         233333221    0


Q ss_pred             CCCcccccCCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCC
Q 023273          203 YTKENIEDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       203 ~~~~~~~~~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (284)
                      .....+.+.-++.|++|-+++.   .+.+++.|+++--++.++.|.
T Consensus       252 ~~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt  297 (388)
T 1vl6_A          252 RLSGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPV  297 (388)
T ss_dssp             CCCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSS
T ss_pred             CchhhHHHHHccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCC
Confidence            1122344444578999998773   277888888777666666654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.17  E-value=0.016  Score=48.85  Aligned_cols=42  Identities=17%  Similarity=0.173  Sum_probs=35.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh-hhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~~~~  192 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++ ++.+.+
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~   64 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQT-GYRVVIHYHNSAEAAVSL   64 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHH-TCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCeEEEEeCCchHHHHHH
Confidence            5789999999999999988888774 99999999987 655433

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.15  E-value=0.094  Score=38.36  Aligned_cols=72  Identities=24%  Similarity=0.270  Sum_probs=50.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEe-eCCCc-ccccC-CCcccEEEeCCCC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAI-DYTKE-NIEDL-PEKFDVVFDAVGQ  224 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~-~~~~~-~~~~~-~~~~d~vid~~g~  224 (284)
                      +.+|+|+| +|.+|...++.+... |.+++++++++++.+.+++ .+...+. +.... .+... ..++|+++.+++.
T Consensus         4 ~m~i~IiG-~G~iG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~   79 (140)
T 1lss_A            4 GMYIIIAG-IGRVGYTLAKSLSEK-GHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGK   79 (140)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCC
Confidence            46899999 699999998888874 8999999999888877764 4543222 22111 12211 3579999999986

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=96.14  E-value=0.04  Score=44.67  Aligned_cols=94  Identities=21%  Similarity=0.262  Sum_probs=63.7

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCc---EEeeCCCcccccCCCcccEEEe
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD---LAIDYTKENIEDLPEKFDVVFD  220 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~d~vid  220 (284)
                      .....++.+||-+| +| .|..+..+++.  +. +++.++.+++..+.+++....   .++..+........+.+|+|+.
T Consensus        38 ~~~~~~~~~vLdiG-~G-~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~  113 (243)
T 3bkw_A           38 MLPEVGGLRIVDLG-CG-FGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYS  113 (243)
T ss_dssp             HSCCCTTCEEEEET-CT-TCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEE
T ss_pred             hccccCCCEEEEEc-Cc-CCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEE
Confidence            45566889999998 44 46777777775  55 999999999999988875432   2222222222212457999986


Q ss_pred             CCC-----C----cHHHHHhhccCCEEEEEc
Q 023273          221 AVG-----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       221 ~~g-----~----~~~~~~~l~~~G~~v~~g  242 (284)
                      ...     .    +..+.+.|+++|++++..
T Consensus       114 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  144 (243)
T 3bkw_A          114 SLALHYVEDVARLFRTVHQALSPGGHFVFST  144 (243)
T ss_dssp             ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence            543     1    267788999999998753

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.14  E-value=0.0091  Score=47.60  Aligned_cols=94  Identities=14%  Similarity=0.032  Sum_probs=60.2

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc-CC-----------------cEEeeCCC
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-GA-----------------DLAIDYTK  205 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~-g~-----------------~~~~~~~~  205 (284)
                      ....+.++.+||.+| | +.|..+..+++.  |++|+.++.+++-++.+++. ..                 -.++..+.
T Consensus        16 ~~l~~~~~~~vLD~G-C-G~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~   91 (203)
T 1pjz_A           16 SSLNVVPGARVLVPL-C-GKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   91 (203)
T ss_dssp             HHHCCCTTCEEEETT-T-CCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HhcccCCCCEEEEeC-C-CCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc
Confidence            344567899999998 3 456777788875  78999999999988888653 11                 11111111


Q ss_pred             cccccCC-CcccEEEeCCC--C---------cHHHHHhhccCCEEEEE
Q 023273          206 ENIEDLP-EKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       206 ~~~~~~~-~~~d~vid~~g--~---------~~~~~~~l~~~G~~v~~  241 (284)
                      ..+.... +.||+|++...  .         .+.+.+.|+++|+++++
T Consensus        92 ~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           92 FALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             SSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             ccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            1111111 46999997432  1         14578899999994333

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.12  E-value=0.018  Score=49.85  Aligned_cols=86  Identities=21%  Similarity=0.309  Sum_probs=63.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC----
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~----  224 (284)
                      -.|++|.|+| .|.+|...++.++.. |.+|++.+++.++ +.+.+.|... .     ++.+..+..|+|+.+...    
T Consensus       163 l~g~tvgIIG-lG~IG~~vA~~l~~~-G~~V~~~d~~~~~-~~~~~~g~~~-~-----~l~ell~~aDvV~l~~P~t~~t  233 (335)
T 2g76_A          163 LNGKTLGILG-LGRIGREVATRMQSF-GMKTIGYDPIISP-EVSASFGVQQ-L-----PLEEIWPLCDFITVHTPLLPST  233 (335)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSSSCH-HHHHHTTCEE-C-----CHHHHGGGCSEEEECCCCCTTT
T ss_pred             CCcCEEEEEe-ECHHHHHHHHHHHHC-CCEEEEECCCcch-hhhhhcCcee-C-----CHHHHHhcCCEEEEecCCCHHH
Confidence            4678999999 899999999999984 9999999987665 3556677532 1     233334578888887652    


Q ss_pred             ---c-HHHHHhhccCCEEEEEcC
Q 023273          225 ---C-DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       225 ---~-~~~~~~l~~~G~~v~~g~  243 (284)
                         . ...+..|++++.++.++-
T Consensus       234 ~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          234 TGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             TTSBCHHHHTTSCTTEEEEECSC
T ss_pred             HHhhCHHHHhhCCCCcEEEECCC
Confidence               1 467788888888887753

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.11  E-value=0.011  Score=48.99  Aligned_cols=40  Identities=23%  Similarity=0.366  Sum_probs=33.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD  190 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~  190 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++++++++.+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~   59 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADA-GDKVAITYRSGEPPE   59 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSCCCT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHhhc
Confidence            4789999999999999988888774 999999998766543

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.10  E-value=0.02  Score=49.33  Aligned_cols=42  Identities=21%  Similarity=0.172  Sum_probs=36.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEe-CChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~-~~~~~~~~~  192 (284)
                      .++++||+|++|++|.+.++.+... |++|++++ +++++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~-G~~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAE-GYAVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHH
Confidence            5789999999999999999888874 99999999 888776544

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.09  E-value=0.0048  Score=49.90  Aligned_cols=37  Identities=22%  Similarity=0.315  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      .+++++|+|+++++|.+.++..... |++|++++++++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~   41 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESE-HTIVHVASRQTG   41 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCST-TEEEEEESGGGT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEecCCcc
Confidence            4678999999999999998888774 999999887543

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.09  E-value=0.016  Score=48.23  Aligned_cols=38  Identities=16%  Similarity=0.287  Sum_probs=33.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      .++++||+|++|++|.+.++.+... |++|+++++++++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~   44 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDE-GSKVIDLSIHDPG   44 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEecCccc
Confidence            4789999999999999998888874 9999999987655

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.09  E-value=0.018  Score=47.45  Aligned_cols=73  Identities=16%  Similarity=0.252  Sum_probs=47.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCCh--hhHHHHHHc--CCc-EEe--eCCCc--ccccC-------C
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSST--AKLDLLRSL--GAD-LAI--DYTKE--NIEDL-------P  212 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~--~~~~~~~~~--g~~-~~~--~~~~~--~~~~~-------~  212 (284)
                      .+++++|+|++|++|.+.++.+... |++ |+++++++  +..+.+++.  +.. .++  |-.+.  .....       .
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~-G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKR-NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC-CCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            4689999999999999988888774 886 88888865  334444332  211 122  22221  11111       2


Q ss_pred             CcccEEEeCCC
Q 023273          213 EKFDVVFDAVG  223 (284)
Q Consensus       213 ~~~d~vid~~g  223 (284)
                      +++|++|+++|
T Consensus        83 g~id~lv~~Ag   93 (254)
T 1sby_A           83 KTVDILINGAG   93 (254)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999988

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.08  E-value=0.016  Score=48.97  Aligned_cols=88  Identities=30%  Similarity=0.430  Sum_probs=56.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh-------hhHHHHH---HcCCcEE-eeCCC-cccccCCCcccEE
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-------AKLDLLR---SLGADLA-IDYTK-ENIEDLPEKFDVV  218 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-------~~~~~~~---~~g~~~~-~~~~~-~~~~~~~~~~d~v  218 (284)
                      +.+|+|+||+|.+|...++.+... |.+|+++++++       ++.+.++   ..+...+ .|..+ +.+...-+++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v   80 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKA-GNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIV   80 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHH-TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhC-CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEE
Confidence            467999999999999999888875 89999999876       5544333   3343322 12221 2233334589999


Q ss_pred             EeCCCC--c---HHHHHhhccC---CEEE
Q 023273          219 FDAVGQ--C---DKALKAVKEG---GRVV  239 (284)
Q Consensus       219 id~~g~--~---~~~~~~l~~~---G~~v  239 (284)
                      |++++.  .   ..+++.++..   ++++
T Consensus        81 i~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           81 ICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             EECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             EECCcccccccHHHHHHHHHhcCCceEEe
Confidence            999874  1   3444444433   4676

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.08  E-value=0.0075  Score=51.82  Aligned_cols=72  Identities=18%  Similarity=0.238  Sum_probs=47.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-cccccCCCcccEEEeCCC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~d~vid~~g  223 (284)
                      ..+|||+||+|.+|...++.+... |.+|+++++++++.+.+...+...+ .|..+ +.+.+.-+++|+||.+++
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~   86 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAA-GHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG   86 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence            358999999999999999888874 8999999998766543332232211 12211 123333467999999987

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=96.07  E-value=0.014  Score=48.61  Aligned_cols=93  Identities=20%  Similarity=0.251  Sum_probs=62.2

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHh--cCCeEEEEeCChhhHHHHHH----cCCc---EEeeCCCcccccCCCcccE
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHV--FGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKFDV  217 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~--~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~d~  217 (284)
                      .+++|.+||-+|+  +.|..+..+++..  .+++++.++.+++-++.+++    .+..   .++..+..+++  .+.+|+
T Consensus        67 ~~~~~~~vLDlGc--GtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~--~~~~d~  142 (261)
T 4gek_A           67 FVQPGTQVYDLGC--SLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA--IENASM  142 (261)
T ss_dssp             HCCTTCEEEEETC--TTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC--CCSEEE
T ss_pred             hCCCCCEEEEEeC--CCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc--cccccc
Confidence            4789999999993  4577777777753  26799999999998887764    2321   12222211121  246898


Q ss_pred             EEeCCC-C----------cHHHHHhhccCCEEEEEcC
Q 023273          218 VFDAVG-Q----------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       218 vid~~g-~----------~~~~~~~l~~~G~~v~~g~  243 (284)
                      |+.+.. .          ++.+.+.|+|+|++++...
T Consensus       143 v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~  179 (261)
T 4gek_A          143 VVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK  179 (261)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence            876543 1          2567889999999997643

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.06  E-value=0.016  Score=47.67  Aligned_cols=68  Identities=19%  Similarity=0.320  Sum_probs=46.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe--eCCC-cccccC-------CCcccEEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTK-ENIEDL-------PEKFDVVF  219 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~-~~~~~~-------~~~~d~vi  219 (284)
                      .+++++|+|++|++|.+.++.+... |++|++++++++.    ++.+ ...+  |-.+ +.+...       .+++|++|
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~----~~~~-~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEA-GAKVTGFDQAFTQ----EQYP-FATEVMDVADAAQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCCCS----SCCS-SEEEECCTTCHHHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCchhh----hcCC-ceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999998888874 9999999987653    1223 1222  2211 111111       34799999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +++|
T Consensus        80 ~~Ag   83 (250)
T 2fwm_X           80 NAAG   83 (250)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=96.06  E-value=0.05  Score=43.59  Aligned_cols=94  Identities=23%  Similarity=0.290  Sum_probs=59.6

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH----HHHcCCcEEeeCCCccc---ccCCCcccEE
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL----LRSLGADLAIDYTKENI---EDLPEKFDVV  218 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~----~~~~g~~~~~~~~~~~~---~~~~~~~d~v  218 (284)
                      ..+++|++||-+|+  +.|..+..+++..++.+|+.++.+++..+.    ++.......+..+....   ....+.+|+|
T Consensus        53 ~~~~~g~~VLDlGc--GtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V  130 (210)
T 1nt2_A           53 LKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLI  130 (210)
T ss_dssp             CCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEE
T ss_pred             cCCCCCCEEEEECC--cCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEE
Confidence            56789999999994  356677777776433689999999875433    33332111222111111   1123579999


Q ss_pred             EeCCCC-------cHHHHHhhccCCEEEEE
Q 023273          219 FDAVGQ-------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       219 id~~g~-------~~~~~~~l~~~G~~v~~  241 (284)
                      +.....       ...+.+.|+++|++++.
T Consensus       131 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~  160 (210)
T 1nt2_A          131 YQDIAQKNQIEILKANAEFFLKEKGEVVIM  160 (210)
T ss_dssp             EECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence            876542       24567899999999977

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.06  E-value=0.049  Score=47.39  Aligned_cols=89  Identities=22%  Similarity=0.293  Sum_probs=61.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC-----ccc--ccC-----C----
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-----ENI--EDL-----P----  212 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~--~~~-----~----  212 (284)
                      -.|++|.|.| .|.+|..+++.++.. |++|++.+.++++.+.+++++++.+ +.+.     .++  +..     .    
T Consensus       173 L~GktV~I~G-~GnVG~~~A~~l~~~-GakVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A~~~~I~~~~~  249 (355)
T 1c1d_A          173 LDGLTVLVQG-LGAVGGSLASLAAEA-GAQLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGGVITTEVA  249 (355)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSCCBCHHHH
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHhHHHhhcCHHHH
Confidence            5789999999 899999999999995 9999988888776566667775432 2110     010  000     0    


Q ss_pred             --CcccEEEeCCCCc---HHHHHhhccCCEEEE
Q 023273          213 --EKFDVVFDAVGQC---DKALKAVKEGGRVVS  240 (284)
Q Consensus       213 --~~~d~vid~~g~~---~~~~~~l~~~G~~v~  240 (284)
                        -+.++++++++.+   +.+.+.|..+|.++.
T Consensus       250 ~~lk~~iVie~AN~p~t~~eA~~~L~~~gIlv~  282 (355)
T 1c1d_A          250 RTLDCSVVAGAANNVIADEAASDILHARGILYA  282 (355)
T ss_dssp             HHCCCSEECCSCTTCBCSHHHHHHHHHTTCEEC
T ss_pred             hhCCCCEEEECCCCCCCCHHHHHHHHhCCEEEE
Confidence              1467778877642   466788888887664

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=96.05  E-value=0.018  Score=47.01  Aligned_cols=73  Identities=22%  Similarity=0.456  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEE-eCChhhHHHH----HHcCCc-EEeeC--CC-cccccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL----RSLGAD-LAIDY--TK-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~~~~----~~~g~~-~~~~~--~~-~~~~~~-------~~  213 (284)
                      .+++++|+|++|++|...++.+... |++|+++ .+++++.+.+    ++.+.. ..+.-  .+ +.+...       .+
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~-G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNM-GANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999988888874 9999988 5555554333    233432 22221  11 111111       23


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        83 ~~d~vi~~Ag   92 (247)
T 2hq1_A           83 RIDILVNNAG   92 (247)
T ss_dssp             CCCEEEECC-
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.04  E-value=0.028  Score=47.13  Aligned_cols=89  Identities=22%  Similarity=0.258  Sum_probs=59.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHH-HHcCC--cEEeeCCCcccccCCCcccEEEeCCCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGA--DLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~-~~~g~--~~~~~~~~~~~~~~~~~~d~vid~~g~  224 (284)
                      -.+++++|+| +|++|.+++..+... |+ +++++.++.+|.+.+ ++++.  ...+..+  ++..  ..+|+||+++..
T Consensus       118 l~~k~~lvlG-aGg~~~aia~~L~~~-G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~--~l~~--~~~DivInaTp~  191 (272)
T 3pwz_A          118 LRNRRVLLLG-AGGAVRGALLPFLQA-GPSELVIANRDMAKALALRNELDHSRLRISRYE--ALEG--QSFDIVVNATSA  191 (272)
T ss_dssp             CTTSEEEEEC-CSHHHHHHHHHHHHT-CCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG--GGTT--CCCSEEEECSSG
T ss_pred             ccCCEEEEEC-ccHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH--Hhcc--cCCCEEEECCCC
Confidence            3688999999 689999988888775 75 899999998887655 44443  1222221  1211  679999999863


Q ss_pred             c------HHHHHhhccCCEEEEEcC
Q 023273          225 C------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       225 ~------~~~~~~l~~~G~~v~~g~  243 (284)
                      .      ....+.++++..++.+..
T Consensus       192 gm~~~~~~i~~~~l~~~~~V~DlvY  216 (272)
T 3pwz_A          192 SLTADLPPLPADVLGEAALAYELAY  216 (272)
T ss_dssp             GGGTCCCCCCGGGGTTCSEEEESSC
T ss_pred             CCCCCCCCCCHHHhCcCCEEEEeec
Confidence            1      122356777776666643

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.03  E-value=0.023  Score=46.99  Aligned_cols=73  Identities=19%  Similarity=0.272  Sum_probs=46.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEE-eCChhhHHHH----HHcCCc-EEeeCC--C-cccccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL----RSLGAD-LAIDYT--K-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~~~~----~~~g~~-~~~~~~--~-~~~~~~-------~~  213 (284)
                      .++++||+|+++++|.+.++..... |++|+++ .+++++.+..    ++.+.. ..+.-+  + +.....       .+
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQE-GANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999988888774 9999988 4455544333    233422 222211  1 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++++++|
T Consensus        86 ~id~lv~nAg   95 (259)
T 3edm_A           86 EIHGLVHVAG   95 (259)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999886

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.02  E-value=0.021  Score=48.94  Aligned_cols=36  Identities=28%  Similarity=0.275  Sum_probs=31.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      ..++++||+|+++++|.+.++..... |++|++++++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~-G~~Vv~~~~~   79 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQD-GADIVAIDLC   79 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC-CCeEEEEecc
Confidence            46789999999999999988888774 9999999865

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.01  E-value=0.0069  Score=49.62  Aligned_cols=93  Identities=18%  Similarity=0.249  Sum_probs=62.5

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc-----EEeeCCCccc-ccC-CCcccEE-
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-----LAIDYTKENI-EDL-PEKFDVV-  218 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~-----~~~~~~~~~~-~~~-~~~~d~v-  218 (284)
                      ...+|.+||-+| +| +|..+..+++. .+.++++++.+++-.+.+++....     .++..+.... ... .+.||.| 
T Consensus        57 ~~~~G~rVLdiG-~G-~G~~~~~~~~~-~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~  133 (236)
T 3orh_A           57 ASSKGGRVLEVG-FG-MAIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGIL  133 (236)
T ss_dssp             HTTTCEEEEEEC-CT-TSHHHHHHTTS-CEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred             hccCCCeEEEEC-CC-ccHHHHHHHHh-CCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEE
Confidence            347899999999 44 68888888887 467899999999988888764321     2222221111 111 3568987 


Q ss_pred             EeCCCC-------------cHHHHHhhccCCEEEEEc
Q 023273          219 FDAVGQ-------------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       219 id~~g~-------------~~~~~~~l~~~G~~v~~g  242 (284)
                      +|+...             .+.+.+.|+|+|+++++.
T Consensus       134 ~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             EeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            565431             146889999999998763

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.01  E-value=0.014  Score=51.19  Aligned_cols=86  Identities=26%  Similarity=0.307  Sum_probs=59.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---  224 (284)
                      -.|.+|.|+| .|.+|...++.++.. |.+ |++.+++.++.+.+.+.|...+     .++.+.....|+|+.++..   
T Consensus       162 l~g~tvgIIG-~G~IG~~vA~~l~~~-G~~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~aDvV~l~~P~t~~  234 (364)
T 2j6i_A          162 IEGKTIATIG-AGRIGYRVLERLVPF-NPKELLYYDYQALPKDAEEKVGARRV-----ENIEELVAQADIVTVNAPLHAG  234 (364)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHGGG-CCSEEEEECSSCCCHHHHHHTTEEEC-----SSHHHHHHTCSEEEECCCCSTT
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHhC-CCcEEEEECCCccchhHHHhcCcEec-----CCHHHHHhcCCEEEECCCCChH
Confidence            3688999999 899999999999985 997 9999987766666666664321     1122233457777766542   


Q ss_pred             ----c-HHHHHhhccCCEEEEE
Q 023273          225 ----C-DKALKAVKEGGRVVSI  241 (284)
Q Consensus       225 ----~-~~~~~~l~~~G~~v~~  241 (284)
                          . ...+..|++++.+|.+
T Consensus       235 t~~li~~~~l~~mk~ga~lIn~  256 (364)
T 2j6i_A          235 TKGLINKELLSKFKKGAWLVNT  256 (364)
T ss_dssp             TTTCBCHHHHTTSCTTEEEEEC
T ss_pred             HHHHhCHHHHhhCCCCCEEEEC
Confidence                1 3456667776666665

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=96.00  E-value=0.028  Score=49.14  Aligned_cols=104  Identities=19%  Similarity=0.274  Sum_probs=73.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~-----  224 (284)
                      .|++|.|+| .|.+|...++.++. +|.+|++.+++. +.+.+.+.|...      .++.+.....|+|+-+...     
T Consensus       175 ~gktvGIIG-lG~IG~~vA~~l~~-fG~~V~~~d~~~-~~~~~~~~g~~~------~~l~ell~~aDvV~l~~Plt~~T~  245 (365)
T 4hy3_A          175 AGSEIGIVG-FGDLGKALRRVLSG-FRARIRVFDPWL-PRSMLEENGVEP------ASLEDVLTKSDFIFVVAAVTSENK  245 (365)
T ss_dssp             SSSEEEEEC-CSHHHHHHHHHHTT-SCCEEEEECSSS-CHHHHHHTTCEE------CCHHHHHHSCSEEEECSCSSCC--
T ss_pred             CCCEEEEec-CCcccHHHHHhhhh-CCCEEEEECCCC-CHHHHhhcCeee------CCHHHHHhcCCEEEEcCcCCHHHH
Confidence            478999999 99999999999998 599999999874 344455666431      1234445678999887541     


Q ss_pred             ---cHHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHHHHHHHHHHCCCee
Q 023273          225 ---CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (284)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  274 (284)
                         ....+..|++++.+|.++-..            .-+-+.+.+.+++|+|.
T Consensus       246 ~li~~~~l~~mk~gailIN~aRG~------------~vde~aL~~aL~~g~i~  286 (365)
T 4hy3_A          246 RFLGAEAFSSMRRGAAFILLSRAD------------VVDFDALMAAVSSGHIV  286 (365)
T ss_dssp             -CCCHHHHHTSCTTCEEEECSCGG------------GSCHHHHHHHHHTTSSE
T ss_pred             hhcCHHHHhcCCCCcEEEECcCCc------------hhCHHHHHHHHHcCCce
Confidence               167889999999998776211            11233556666777765

>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}

Probab=96.00  E-value=0.03  Score=44.46  Aligned_cols=96  Identities=21%  Similarity=0.192  Sum_probs=64.5

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CC---cEEeeCCCcccccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA---DLAIDYTKENIEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~---~~~~~~~~~~~~~~~~~~d  216 (284)
                      .....+++ +||-+| + +.|..+..+++. .+.+++.++.+++..+.+++.    +.   ..++..+...++-..+.+|
T Consensus        38 ~~~~~~~~-~vLdiG-~-G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D  113 (219)
T 3dlc_A           38 NRFGITAG-TCIDIG-S-GPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYAD  113 (219)
T ss_dssp             HHHCCCEE-EEEEET-C-TTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEE
T ss_pred             HhcCCCCC-EEEEEC-C-CCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCccccc
Confidence            34555666 999998 3 347788888887 588999999999988777643    32   1223222222222246799


Q ss_pred             EEEeCCC-----C----cHHHHHhhccCCEEEEEcC
Q 023273          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       217 ~vid~~g-----~----~~~~~~~l~~~G~~v~~g~  243 (284)
                      +|+....     .    +..+.+.|+++|++++...
T Consensus       114 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~  149 (219)
T 3dlc_A          114 LIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGG  149 (219)
T ss_dssp             EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             EEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEec
Confidence            9987543     1    2678889999999988653

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.99  E-value=0.015  Score=48.47  Aligned_cols=74  Identities=26%  Similarity=0.368  Sum_probs=48.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEE-eCChhhHHHH----HHcCCc-EEeeCCCcc---cccC-------C
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL----RSLGAD-LAIDYTKEN---IEDL-------P  212 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~~~~----~~~g~~-~~~~~~~~~---~~~~-------~  212 (284)
                      ..++++||+|++|++|.+.++.+... |++|+++ .+++++.+.+    ++.+.. ..+..+-.+   +...       .
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQ-GWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            46789999999999999988888774 9999877 5666655443    233332 122211111   1111       2


Q ss_pred             CcccEEEeCCC
Q 023273          213 EKFDVVFDAVG  223 (284)
Q Consensus       213 ~~~d~vid~~g  223 (284)
                      +++|++|+++|
T Consensus       103 g~id~li~nAg  113 (272)
T 4e3z_A          103 GRLDGLVNNAG  113 (272)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.99  E-value=0.026  Score=46.70  Aligned_cols=90  Identities=13%  Similarity=0.089  Sum_probs=59.9

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCC---------------------c-EEeeCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGA---------------------D-LAIDYT  204 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~---------------------~-~~~~~~  204 (284)
                      ..++.+||.+| | +.|..+..+|+.  |++|+.++.+++-++.+++ .+.                     . .++..+
T Consensus        66 ~~~~~~vLD~G-C-G~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  141 (252)
T 2gb4_A           66 GQSGLRVFFPL-C-GKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS  141 (252)
T ss_dssp             TCCSCEEEETT-C-TTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred             CCCCCeEEEeC-C-CCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence            46788999998 4 457778888875  8899999999999888854 321                     1 112222


Q ss_pred             CcccccC-CCcccEEEeCCC--C---------cHHHHHhhccCCEEEEE
Q 023273          205 KENIEDL-PEKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       205 ~~~~~~~-~~~~d~vid~~g--~---------~~~~~~~l~~~G~~v~~  241 (284)
                      -..+... .+.||+|++...  .         ...+.+.|+++|+++++
T Consensus       142 ~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~  190 (252)
T 2gb4_A          142 IFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA  190 (252)
T ss_dssp             TTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            1122221 267999998532  1         14577899999998644

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=95.99  E-value=0.017  Score=48.04  Aligned_cols=37  Identities=16%  Similarity=0.230  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      .++++||+|+++++|.+.++..... |++|+++.+...
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~   46 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALE-SVNLVLHYHQAK   46 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTS-SCEEEEEESCGG
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecCcc
Confidence            5789999999999999988888874 999999876543

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.99  E-value=0.015  Score=47.93  Aligned_cols=73  Identities=26%  Similarity=0.411  Sum_probs=48.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHH-HcCCc-EEe--eCCCc-ccccC-------CCcccE
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR-SLGAD-LAI--DYTKE-NIEDL-------PEKFDV  217 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~-~~g~~-~~~--~~~~~-~~~~~-------~~~~d~  217 (284)
                      +++++|+|+++++|.+.++.....+ +.+|+.+.+++++.+.+. +++.. ..+  |-.+. .....       .+.+|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            5789999999999999887665533 478888899888876664 34422 122  22111 11111       247999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +++++|
T Consensus        82 lvnnAg   87 (254)
T 3kzv_A           82 LVANAG   87 (254)
T ss_dssp             EEEECC
T ss_pred             EEECCc
Confidence            999887

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.99  E-value=0.018  Score=47.76  Aligned_cols=73  Identities=32%  Similarity=0.423  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH----HHcCCc-EEe--eCCC-cccccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~----~~~g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      .+++++|+|++|++|...++.+... |++|+++++ ++++.+.+    ++.+.. ..+  |-.+ +.+...       .+
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRR-GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988888874 999999998 66655433    233433 222  2211 111111       13


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        99 ~~d~vi~~Ag  108 (274)
T 1ja9_A           99 GLDFVMSNSG  108 (274)
T ss_dssp             CEEEEECCCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.98  E-value=0.019  Score=49.27  Aligned_cols=36  Identities=25%  Similarity=0.395  Sum_probs=31.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      -.++++||+|+++++|.+.++..... |++|++++++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~-G~~Vv~~~r~   60 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAE-GARVVVNDIG   60 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECCC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCc
Confidence            46889999999999999988887774 9999999876

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.95  E-value=0.023  Score=46.29  Aligned_cols=72  Identities=19%  Similarity=0.391  Sum_probs=47.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEE-eCChhhHHHHH----HcCCc-EEe--eCCC-cccccC-------CCc
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLLR----SLGAD-LAI--DYTK-ENIEDL-------PEK  214 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~~~~~----~~g~~-~~~--~~~~-~~~~~~-------~~~  214 (284)
                      |++++|+|++|++|...++.+... |++|+++ .+++++.+.+.    +.+.. ..+  |-.+ +.+...       .++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~-G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKA-GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999998888874 9999985 67776654432    22322 122  2111 111111       247


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++|+++|
T Consensus        80 id~li~~Ag   88 (244)
T 1edo_A           80 IDVVVNNAG   88 (244)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=95.93  E-value=0.017  Score=48.72  Aligned_cols=72  Identities=24%  Similarity=0.198  Sum_probs=49.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHH--HHHHcCCcEE-eeCCC-cccccCCCcccEEEeCCC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLD--LLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~--~~~~~g~~~~-~~~~~-~~~~~~~~~~d~vid~~g  223 (284)
                      .++|+|+|++|.+|...++.+... | .+|+++++++++..  .+...+...+ .|..+ +.+...-+++|+||.+++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   81 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLED-GTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN   81 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH-CSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhc-CCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence            478999999999999998887775 7 89999999876642  2333443322 12221 223333467999999987

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.93  E-value=0.0079  Score=50.34  Aligned_cols=92  Identities=21%  Similarity=0.259  Sum_probs=60.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhc--CCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-cccccCCCcccEEEeCCCC-c-
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVF--GASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVGQ-C-  225 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~--g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~d~vid~~g~-~-  225 (284)
                      ++|+|+|++|.+|...++.+.. .  |.+|+++++++++...+...+...+ .|..+ +.+.+.-+++|+||.+++. . 
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~-~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~   79 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLK-KVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYD   79 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTT-TSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSC
T ss_pred             CeEEEEcCCchHHHHHHHHHHH-hCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcC
Confidence            3689999999999999888776 4  7899999998877665554443322 12221 2233335689999999873 1 


Q ss_pred             --------HHHHHhhccC--CEEEEEcCC
Q 023273          226 --------DKALKAVKEG--GRVVSIIGS  244 (284)
Q Consensus       226 --------~~~~~~l~~~--G~~v~~g~~  244 (284)
                              ..+++.++..  ++++.++..
T Consensus        80 ~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~  108 (287)
T 2jl1_A           80 NTLLIVQHANVVKAARDAGVKHIAYTGYA  108 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred             chHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence                    2344444433  588887643

>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}

Probab=95.91  E-value=0.052  Score=45.80  Aligned_cols=93  Identities=14%  Similarity=0.139  Sum_probs=64.5

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChhhHHHHHHc-------C-CcEEeeCCCcccccCC-----
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSL-------G-ADLAIDYTKENIEDLP-----  212 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~~~-------g-~~~~~~~~~~~~~~~~-----  212 (284)
                      ...++.+||-+| | +.|..+..+++.. .+.+++.++.+++..+.+++.       . ...++..+...+....     
T Consensus        33 ~~~~~~~vLDiG-c-G~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~  110 (299)
T 3g5t_A           33 HDGERKLLVDVG-C-GPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVD  110 (299)
T ss_dssp             CCSCCSEEEEET-C-TTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTT
T ss_pred             hcCCCCEEEEEC-C-CCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcccccccc
Confidence            346899999999 4 4688888898753 488999999999988887653       1 1223333222222222     


Q ss_pred             -CcccEEEeCCC----C----cHHHHHhhccCCEEEEE
Q 023273          213 -EKFDVVFDAVG----Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       213 -~~~d~vid~~g----~----~~~~~~~l~~~G~~v~~  241 (284)
                       +.+|+|+.+..    .    +..+.++|+++|++++.
T Consensus       111 ~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~  148 (299)
T 3g5t_A          111 KQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIW  148 (299)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEE
Confidence             57999987543    2    36788999999999874

>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20

Probab=95.90  E-value=0.014  Score=47.77  Aligned_cols=94  Identities=18%  Similarity=0.247  Sum_probs=61.6

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCccccc---CCCcccE
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIED---LPEKFDV  217 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~---~~~~~d~  217 (284)
                      .+.++.+||-+|+ | .|..++.+++...+.+++.++.+++..+.+++    .+..  .++..+..++..   ..+.||+
T Consensus        67 ~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~  144 (240)
T 1xdz_A           67 DFNQVNTICDVGA-G-AGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDI  144 (240)
T ss_dssp             CGGGCCEEEEECS-S-SCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEE
T ss_pred             ccCCCCEEEEecC-C-CCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccE
Confidence            4467889999994 3 56666666654347899999999988877754    3432  233332222221   1357999


Q ss_pred             EEeCC-CCc----HHHHHhhccCCEEEEEc
Q 023273          218 VFDAV-GQC----DKALKAVKEGGRVVSII  242 (284)
Q Consensus       218 vid~~-g~~----~~~~~~l~~~G~~v~~g  242 (284)
                      |+... ...    ..+.+.|+++|++++..
T Consensus       145 V~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  174 (240)
T 1xdz_A          145 VTARAVARLSVLSELCLPLVKKNGLFVALK  174 (240)
T ss_dssp             EEEECCSCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             EEEeccCCHHHHHHHHHHhcCCCCEEEEEe
Confidence            98643 332    66778999999998763

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.90  E-value=0.042  Score=47.04  Aligned_cols=86  Identities=15%  Similarity=0.082  Sum_probs=59.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCC--eEEEEeCChhhHHHHHHcCCc-EEeeCCCccccc-CCCcccEEEeCCCC--
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLGAD-LAIDYTKENIED-LPEKFDVVFDAVGQ--  224 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~--~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~-~~~~~d~vid~~g~--  224 (284)
                      -.+|.|+| .|.+|.+.+..++.. |.  +|++.++++++.+.+++.|.. .....    ..+ ...+.|+||-|+..  
T Consensus        33 ~~kI~IIG-~G~mG~slA~~l~~~-G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~----~~~~~~~~aDvVilavp~~~  106 (314)
T 3ggo_A           33 MQNVLIVG-VGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVDLGIIDEGTTS----IAKVEDFSPDFVMLSSPVRT  106 (314)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHHTTSCSEEESC----TTGGGGGCCSEEEECSCGGG
T ss_pred             CCEEEEEe-eCHHHHHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHCCCcchhcCC----HHHHhhccCCEEEEeCCHHH
Confidence            36899999 899999988888874 87  899999999999988888852 22211    222 23567888887763  


Q ss_pred             ----cHHHHHhhccCCEEEEEc
Q 023273          225 ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ----~~~~~~~l~~~G~~v~~g  242 (284)
                          .......++++..++.++
T Consensus       107 ~~~vl~~l~~~l~~~~iv~d~~  128 (314)
T 3ggo_A          107 FREIAKKLSYILSEDATVTDQG  128 (314)
T ss_dssp             HHHHHHHHHHHSCTTCEEEECC
T ss_pred             HHHHHHHHhhccCCCcEEEECC
Confidence                133344455555555443

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=95.90  E-value=0.021  Score=48.97  Aligned_cols=85  Identities=24%  Similarity=0.265  Sum_probs=62.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC----
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~----  224 (284)
                      -.|.+|.|+| .|.+|...++.++.. |.+|++.++++++. .+++.|... .     ++.+..+..|+|+.++..    
T Consensus       140 l~g~~vgIIG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~~-~~~~~g~~~-~-----~l~ell~~aDvVvl~~P~~~~t  210 (313)
T 2ekl_A          140 LAGKTIGIVG-FGRIGTKVGIIANAM-GMKVLAYDILDIRE-KAEKINAKA-V-----SLEELLKNSDVISLHVTVSKDA  210 (313)
T ss_dssp             CTTCEEEEES-CSHHHHHHHHHHHHT-TCEEEEECSSCCHH-HHHHTTCEE-C-----CHHHHHHHCSEEEECCCCCTTS
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHHC-CCEEEEECCCcchh-HHHhcCcee-c-----CHHHHHhhCCEEEEeccCChHH
Confidence            4688999999 899999999999984 99999999887764 356666542 1     222333568888887652    


Q ss_pred             ---c-HHHHHhhccCCEEEEEc
Q 023273          225 ---C-DKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ---~-~~~~~~l~~~G~~v~~g  242 (284)
                         . ...+..|++++.++.++
T Consensus       211 ~~li~~~~l~~mk~ga~lIn~a  232 (313)
T 2ekl_A          211 KPIIDYPQFELMKDNVIIVNTS  232 (313)
T ss_dssp             CCSBCHHHHHHSCTTEEEEESS
T ss_pred             HHhhCHHHHhcCCCCCEEEECC
Confidence               1 45677888887777665

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.89  E-value=0.058  Score=45.10  Aligned_cols=84  Identities=15%  Similarity=0.161  Sum_probs=57.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCC--eEEEEeCChhhHHHHHHcCCc-EEeeCCCcccccCCC-cccEEEeCCCCc--
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPE-KFDVVFDAVGQC--  225 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~--~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~-~~d~vid~~g~~--  225 (284)
                      .+|.|+| .|.+|.+.+..++.. |.  +|++.++++++.+.+++.|.. ....    +..+... +.|+||.|+...  
T Consensus         2 ~~I~iIG-~G~mG~~~a~~l~~~-g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~aDvVilavp~~~~   75 (281)
T 2g5c_A            2 QNVLIVG-VGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVDLGIIDEGTT----SIAKVEDFSPDFVMLSSPVRTF   75 (281)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHHTTSCSEEES----CGGGGGGTCCSEEEECSCHHHH
T ss_pred             cEEEEEe-cCHHHHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHCCCcccccC----CHHHHhcCCCCEEEEcCCHHHH
Confidence            3689999 899999998888874 76  899999999998888887753 1221    1222234 788888887731  


Q ss_pred             ----HHHHHhhccCCEEEEE
Q 023273          226 ----DKALKAVKEGGRVVSI  241 (284)
Q Consensus       226 ----~~~~~~l~~~G~~v~~  241 (284)
                          ......++++..++.+
T Consensus        76 ~~v~~~l~~~l~~~~iv~~~   95 (281)
T 2g5c_A           76 REIAKKLSYILSEDATVTDQ   95 (281)
T ss_dssp             HHHHHHHHHHSCTTCEEEEC
T ss_pred             HHHHHHHHhhCCCCcEEEEC
Confidence                2333445555555544

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=95.88  E-value=0.0093  Score=49.80  Aligned_cols=91  Identities=18%  Similarity=0.188  Sum_probs=59.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhc--CCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-cccccCCCcccEEEeCCCC----
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVF--GASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVGQ----  224 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~--g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~d~vid~~g~----  224 (284)
                      +|+|+|++|.+|...++.+.. .  |.+|+++++++++.+.+...+...+ .|..+ +.+.+.-+++|+||.+++.    
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~-~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~   79 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMK-TVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQ   79 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTT-TSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred             CEEEEcCCchHHHHHHHHHHh-hCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchH
Confidence            489999999999999888876 4  7899999998877665554443322 12221 2233345689999998873    


Q ss_pred             ----cHHHHHhhcc--CCEEEEEcCC
Q 023273          225 ----CDKALKAVKE--GGRVVSIIGS  244 (284)
Q Consensus       225 ----~~~~~~~l~~--~G~~v~~g~~  244 (284)
                          ...+++.+..  -++++.++..
T Consensus        80 ~~~~~~~l~~a~~~~~~~~~v~~Ss~  105 (286)
T 2zcu_A           80 RAPQHRNVINAAKAAGVKFIAYTSLL  105 (286)
T ss_dssp             --CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEECCC
Confidence                1334444433  2688887643

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.87  E-value=0.023  Score=48.92  Aligned_cols=35  Identities=23%  Similarity=0.368  Sum_probs=30.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      .+++++|+|++|++|.+.++.+... |++|+++.++
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~-G~~V~~~~r~   38 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGA-GHRVYASMRD   38 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEecCc
Confidence            4678999999999999999888884 9999988765

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=95.85  E-value=0.025  Score=46.40  Aligned_cols=73  Identities=23%  Similarity=0.353  Sum_probs=47.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH----HHcCCcE-EeeCCCcc---cccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGADL-AIDYTKEN---IEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~----~~~g~~~-~~~~~~~~---~~~~-------~~  213 (284)
                      .++++||+|++|++|.+.++.+... |++|+++++ ++++.+.+    ++.+... .+.-+-.+   ....       .+
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEE-GYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999988887774 999998877 44544433    3334322 22221111   1111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++++++|
T Consensus        82 ~id~lv~nAg   91 (246)
T 3osu_A           82 SLDVLVNNAG   91 (246)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=95.85  E-value=0.018  Score=48.02  Aligned_cols=42  Identities=26%  Similarity=0.287  Sum_probs=35.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .+++++|+|++|++|.+.+..+... |++|+++++++++.+.+
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~   74 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQA-GADVAIWYNSHPADEKA   74 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHH-TCEEEEEESSSCCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5789999999999999988887774 99999999877655433

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=95.84  E-value=0.019  Score=47.23  Aligned_cols=87  Identities=25%  Similarity=0.317  Sum_probs=58.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC-cccc-------cCCCcccEEEeCC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIE-------DLPEKFDVVFDAV  222 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~-------~~~~~~d~vid~~  222 (284)
                      +++++|+|++|++|.+.++..... |++|+++++++++...     ....++-.+ +...       +..+.+|++|+++
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~-----~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~A   95 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSK-SWNTISIDFRENPNAD-----HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAA   95 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCTTSS-----EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCcccccc-----cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            679999999999999998888874 9999999987765431     011111111 1111       1135789999998


Q ss_pred             CC------c-----------------------HHHHHhhccCCEEEEEcC
Q 023273          223 GQ------C-----------------------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       223 g~------~-----------------------~~~~~~l~~~G~~v~~g~  243 (284)
                      |.      .                       +.++..++++|++|.++.
T Consensus        96 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  145 (251)
T 3orf_A           96 GGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGA  145 (251)
T ss_dssp             CCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             ccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEec
Confidence            72      0                       134556667899998864

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=95.84  E-value=0.019  Score=46.31  Aligned_cols=95  Identities=20%  Similarity=0.213  Sum_probs=63.8

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHc----CC---cEEeeCCCcc-cccC---C-
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL----GA---DLAIDYTKEN-IEDL---P-  212 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~----g~---~~~~~~~~~~-~~~~---~-  212 (284)
                      ....++++||.+| +| .|..++.+++.+. +.+++.++.+++..+.+++.    +.   -.++..+... ....   . 
T Consensus        65 ~~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~  142 (229)
T 2avd_A           65 ARLIQAKKALDLG-TF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGE  142 (229)
T ss_dssp             HHHTTCCEEEEEC-CT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTC
T ss_pred             HHhcCCCEEEEEc-CC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCC
Confidence            4456788999999 44 7888888988743 57999999999988777642    32   1222222111 1111   1 


Q ss_pred             -CcccEEEeCCC--C----cHHHHHhhccCCEEEEEc
Q 023273          213 -EKFDVVFDAVG--Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       213 -~~~d~vid~~g--~----~~~~~~~l~~~G~~v~~g  242 (284)
                       +.+|+|+....  .    ++.+.++|+++|.++...
T Consensus       143 ~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          143 AGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             TTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence             57999875433  2    378889999999998754

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.84  E-value=0.026  Score=49.84  Aligned_cols=87  Identities=18%  Similarity=0.159  Sum_probs=58.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC----
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~----  224 (284)
                      -.|++|.|+| .|.+|...++.++.. |.+|++.+++.++.+..++.|....     .++.+.....|+|+.++..    
T Consensus       189 l~gktvGIIG-lG~IG~~vA~~l~a~-G~~V~~~d~~~~~~~~~~~~G~~~~-----~~l~ell~~aDvV~l~~Plt~~t  261 (393)
T 2nac_A          189 LEAMHVGTVA-AGRIGLAVLRRLAPF-DVHLHYTDRHRLPESVEKELNLTWH-----ATREDMYPVCDVVTLNCPLHPET  261 (393)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHGGG-TCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHGGGCSEEEECSCCCTTT
T ss_pred             CCCCEEEEEe-ECHHHHHHHHHHHhC-CCEEEEEcCCccchhhHhhcCceec-----CCHHHHHhcCCEEEEecCCchHH
Confidence            3688999999 999999999999984 9999999987666666666664321     1122333456777666541    


Q ss_pred             ---c-HHHHHhhccCCEEEEEc
Q 023273          225 ---C-DKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ---~-~~~~~~l~~~G~~v~~g  242 (284)
                         . ...+..|+++..+|.++
T Consensus       262 ~~li~~~~l~~mk~gailIN~a  283 (393)
T 2nac_A          262 EHMINDETLKLFKRGAYIVNTA  283 (393)
T ss_dssp             TTCBSHHHHTTSCTTEEEEECS
T ss_pred             HHHhhHHHHhhCCCCCEEEECC
Confidence               1 34556666666665553

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.84  E-value=0.029  Score=46.25  Aligned_cols=38  Identities=29%  Similarity=0.442  Sum_probs=32.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      .+++++|+|++|++|.+.++.+... |++|++++++.++
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~   50 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAA-GANVAVIYRSAAD   50 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCcchh
Confidence            4678999999999999988888874 9999999986544

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.84  E-value=0.025  Score=46.10  Aligned_cols=72  Identities=18%  Similarity=0.298  Sum_probs=47.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEE-eCChhhHHHH----HHcCCc-EE-e--eCCC-cccccC-------CC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL----RSLGAD-LA-I--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~~~~----~~~g~~-~~-~--~~~~-~~~~~~-------~~  213 (284)
                      +++++|+|++|++|...++.+... |++|+++ .+++++.+.+    ++.+.. .. +  |-.+ +.....       .+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~-G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAED-GFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            368999999999999998888874 9999988 7777765543    223322 22 2  2211 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        80 ~~d~li~~Ag   89 (245)
T 2ph3_A           80 GLDTLVNNAG   89 (245)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=95.83  E-value=0.03  Score=49.83  Aligned_cols=41  Identities=22%  Similarity=0.286  Sum_probs=32.5

Q ss_pred             ccc-CCCCEEEEEcCCchHHHHHHHHHHH-hcCCeEEEEeCChh
Q 023273          146 SAF-SAGKSILVLGGAGGVGTMVIQLAKH-VFGASKVAATSSTA  187 (284)
Q Consensus       146 ~~~-~~g~~vlI~ga~g~~G~~a~~~a~~-~~g~~vi~~~~~~~  187 (284)
                      ..+ +.++++||+||++++|++.+..+.. . |++|+++.++.+
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~-GA~Vv~~~r~~~   97 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGF-GADTLGVFFEKP   97 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHH-CCEEEEEECCCC
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhC-CCEEEEEeCCch
Confidence            444 4688999999999999997776665 5 999999987543

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.83  E-value=0.14  Score=41.46  Aligned_cols=90  Identities=18%  Similarity=0.190  Sum_probs=58.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh-hHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc--
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC--  225 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~--  225 (284)
                      -.|.+|||+| +|.+|...+..+... |++|++++.... .+..+.+.+.-..+.... . .....++|+||-++++.  
T Consensus        29 L~gk~VLVVG-gG~va~~ka~~Ll~~-GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~-~-~~dL~~adLVIaAT~d~~~  104 (223)
T 3dfz_A           29 LKGRSVLVVG-GGTIATRRIKGFLQE-GAAITVVAPTVSAEINEWEAKGQLRVKRKKV-G-EEDLLNVFFIVVATNDQAV  104 (223)
T ss_dssp             CTTCCEEEEC-CSHHHHHHHHHHGGG-CCCEEEECSSCCHHHHHHHHTTSCEEECSCC-C-GGGSSSCSEEEECCCCTHH
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEECCCCCHHHHHHHHcCCcEEEECCC-C-HhHhCCCCEEEECCCCHHH
Confidence            4678999999 799999999999885 999998886432 333333333223332211 1 11236899999999974  


Q ss_pred             HHHHHhhccCCEEEEEc
Q 023273          226 DKALKAVKEGGRVVSII  242 (284)
Q Consensus       226 ~~~~~~l~~~G~~v~~g  242 (284)
                      +..+...++.|..|...
T Consensus       105 N~~I~~~ak~gi~VNvv  121 (223)
T 3dfz_A          105 NKFVKQHIKNDQLVNMA  121 (223)
T ss_dssp             HHHHHHHSCTTCEEEC-
T ss_pred             HHHHHHHHhCCCEEEEe
Confidence            44555555577776654

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.83  E-value=0.0081  Score=51.03  Aligned_cols=68  Identities=25%  Similarity=0.355  Sum_probs=45.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCCcccccCCCcccEEEeCCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      ++|+|+||+|.+|...++.+... |.+|+++++++.+.. ++  +...+ .|...+.+.+.-+++|+||.+++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~-~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~   71 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKND-GNTPIILTRSIGNKA-IN--DYEYRVSDYTLEDLINQLNDVDAVVHLAA   71 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCC--------CCEEEECCCCHHHHHHHTTTCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhC-CCEEEEEeCCCCccc-CC--ceEEEEccccHHHHHHhhcCCCEEEEccc
Confidence            68999999999999999988884 899999999855544 33  22211 12222223333568999999987

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=95.81  E-value=0.009  Score=49.64  Aligned_cols=39  Identities=18%  Similarity=0.300  Sum_probs=33.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL  189 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~  189 (284)
                      .++++||+|++|++|.+.++..... |++|++++++.++.
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~   65 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDR-NYRVVATSRSIKPS   65 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSCCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChhhc
Confidence            5789999999999999988888774 99999999876543

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=95.81  E-value=0.051  Score=43.94  Aligned_cols=95  Identities=12%  Similarity=0.205  Sum_probs=63.3

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCc--E--EeeCCCcc-cccC-CC
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD--L--AIDYTKEN-IEDL-PE  213 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~--~--~~~~~~~~-~~~~-~~  213 (284)
                      ..+.+++.+||-+|  .+.|..++.+++.+. +.+++.++.+++..+.+++    .|..  +  ++..+... .... .+
T Consensus        51 ~~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~  128 (221)
T 3dr5_A           51 TTNGNGSTGAIAIT--PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLAND  128 (221)
T ss_dssp             HSCCTTCCEEEEES--TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTT
T ss_pred             hhCCCCCCCEEEEc--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCC
Confidence            34455666999998  467888888888743 6799999999998877754    3422  1  22221111 2223 46


Q ss_pred             cccEEEeCCC--C----cHHHHHhhccCCEEEEE
Q 023273          214 KFDVVFDAVG--Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       214 ~~d~vid~~g--~----~~~~~~~l~~~G~~v~~  241 (284)
                      .||+||-...  .    ++.++++|+++|.++.-
T Consensus       129 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  162 (221)
T 3dr5_A          129 SYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLA  162 (221)
T ss_dssp             CEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEET
T ss_pred             CcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEe
Confidence            7999875433  2    36788999999999863

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.81  E-value=0.058  Score=45.03  Aligned_cols=92  Identities=13%  Similarity=0.159  Sum_probs=60.7

Q ss_pred             ccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC
Q 023273          132 LPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL  211 (284)
Q Consensus       132 ~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  211 (284)
                      +||+.......++..+ -.|.+++|+|.++.+|..++.++... |++|+++.+..+.++                   +.
T Consensus       132 ~PcTp~gv~~lL~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~-gAtVtv~~~~t~~L~-------------------~~  190 (276)
T 3ngx_A          132 VPATPRAVIDIMDYYG-YHENTVTIVNRSPVVGRPLSMMLLNR-NYTVSVCHSKTKDIG-------------------SM  190 (276)
T ss_dssp             CCHHHHHHHHHHHHHT-CCSCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTCSCHH-------------------HH
T ss_pred             CCCcHHHHHHHHHHhC-cCCCEEEEEcCChHHHHHHHHHHHHC-CCeEEEEeCCcccHH-------------------Hh
Confidence            3544444444555445 78999999997677999999999985 999988865432222                   22


Q ss_pred             CCcccEEEeCCCCcH-HHHHhhccCCEEEEEcCC
Q 023273          212 PEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       212 ~~~~d~vid~~g~~~-~~~~~l~~~G~~v~~g~~  244 (284)
                      .+..|++|.++|.++ ---+.++++..++.+|..
T Consensus       191 ~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~  224 (276)
T 3ngx_A          191 TRSSKIVVVAVGRPGFLNREMVTPGSVVIDVGIN  224 (276)
T ss_dssp             HHHSSEEEECSSCTTCBCGGGCCTTCEEEECCCE
T ss_pred             hccCCEEEECCCCCccccHhhccCCcEEEEeccC
Confidence            345788888887531 112346777777777654

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=95.80  E-value=0.059  Score=42.98  Aligned_cols=93  Identities=14%  Similarity=0.101  Sum_probs=63.5

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC--cEEeeCCCcccccCCCcccEEEeCC
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA--DLAIDYTKENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~d~vid~~  222 (284)
                      .....++.+||-+|+  +.|..+..+++.  +.+++.++.+++..+.+++...  ..++..+...+... +.+|+|+...
T Consensus        40 ~~~~~~~~~vLDiGc--G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~  114 (220)
T 3hnr_A           40 DVVNKSFGNVLEFGV--GTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTY  114 (220)
T ss_dssp             HHHHTCCSEEEEECC--TTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEES
T ss_pred             HhhccCCCeEEEeCC--CCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECc
Confidence            344558899999993  347777777775  7899999999998888876432  12232222222222 7899998754


Q ss_pred             C--C---------cHHHHHhhccCCEEEEEc
Q 023273          223 G--Q---------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       223 g--~---------~~~~~~~l~~~G~~v~~g  242 (284)
                      .  .         +..+.+.|+++|++++..
T Consensus       115 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  145 (220)
T 3hnr_A          115 AFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD  145 (220)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             chhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            3  1         256778999999999774

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=95.80  E-value=0.036  Score=44.69  Aligned_cols=96  Identities=26%  Similarity=0.237  Sum_probs=62.5

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCcEEeeCCCccc---ccCCCcc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADLAIDYTKENI---EDLPEKF  215 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~---~~~~~~~  215 (284)
                      ....+.++++||-+| +|. |..+..+++..+ +.+++.++.+++..+.+++    .....++..+....   ....+.+
T Consensus        67 ~~~~~~~~~~vLDlG-~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~  144 (227)
T 1g8a_A           67 KNFPIKPGKSVLYLG-IAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKV  144 (227)
T ss_dssp             CCCCCCTTCEEEEET-TTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCE
T ss_pred             HhcCCCCCCEEEEEe-ccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCc
Confidence            345678999999999 444 778888887742 3689999999976655543    21112222222111   1224579


Q ss_pred             cEEEeCCCC-------cHHHHHhhccCCEEEEE
Q 023273          216 DVVFDAVGQ-------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       216 d~vid~~g~-------~~~~~~~l~~~G~~v~~  241 (284)
                      |+|+.....       ...+.+.|+++|++++.
T Consensus       145 D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          145 DVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            999865442       25577899999999887

>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}

Probab=95.80  E-value=0.052  Score=43.94  Aligned_cols=91  Identities=16%  Similarity=0.189  Sum_probs=63.5

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC---cEEeeCCCcccccCCCcccEEEeCCC-
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA---DLAIDYTKENIEDLPEKFDVVFDAVG-  223 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~d~vid~~g-  223 (284)
                      +.++.+||-+|+  +.|..+..+++.  +.+++.++.+++..+.+++...   ..++..+...++...+.+|+|+.... 
T Consensus        51 ~~~~~~vLDiG~--G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l  126 (242)
T 3l8d_A           51 VKKEAEVLDVGC--GDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSL  126 (242)
T ss_dssp             SCTTCEEEEETC--TTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCT
T ss_pred             cCCCCeEEEEcC--CCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChH
Confidence            568899999993  457777777775  7799999999999998887531   12222222222222467999986533 


Q ss_pred             ----C----cHHHHHhhccCCEEEEEc
Q 023273          224 ----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       224 ----~----~~~~~~~l~~~G~~v~~g  242 (284)
                          .    ...+.+.|+++|++++..
T Consensus       127 ~~~~~~~~~l~~~~~~L~pgG~l~i~~  153 (242)
T 3l8d_A          127 EWTEEPLRALNEIKRVLKSDGYACIAI  153 (242)
T ss_dssp             TSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence                1    267888999999998774

>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*

Probab=95.79  E-value=0.063  Score=43.82  Aligned_cols=96  Identities=16%  Similarity=0.189  Sum_probs=58.4

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHH----HHcCCcEEeeCCCcc---cccCCCcc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLL----RSLGADLAIDYTKEN---IEDLPEKF  215 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~----~~~g~~~~~~~~~~~---~~~~~~~~  215 (284)
                      ....+++|++||-+|+  +.|..+..+|...+ ..+|++++.++...+.+    ++...-..+..+...   .....+.+
T Consensus        70 ~~~~l~~g~~VLDlG~--GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~  147 (232)
T 3id6_C           70 KTNPIRKGTKVLYLGA--ASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENV  147 (232)
T ss_dssp             SCCSCCTTCEEEEETC--TTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCE
T ss_pred             hhcCCCCCCEEEEEee--cCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccce
Confidence            4467899999999995  33456666666542 45899999999765333    332211222222111   12234579


Q ss_pred             cEEEeCCCCc-------HHHHHhhccCCEEEEE
Q 023273          216 DVVFDAVGQC-------DKALKAVKEGGRVVSI  241 (284)
Q Consensus       216 d~vid~~g~~-------~~~~~~l~~~G~~v~~  241 (284)
                      |+|+.....+       ..+.+.|+++|+++..
T Consensus       148 D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis  180 (232)
T 3id6_C          148 DVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV  180 (232)
T ss_dssp             EEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence            9988665432       1233489999999976

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=95.79  E-value=0.018  Score=48.67  Aligned_cols=92  Identities=21%  Similarity=0.259  Sum_probs=58.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHH-HHcCC----cEEeeCCCcccccCCCcccEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGA----DLAIDYTKENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~-~~~g~----~~~~~~~~~~~~~~~~~~d~vid~~  222 (284)
                      -.+++++|+| +|++|.+++..+... |+ +++++.++.+|.+.+ ++++.    ..+...+.+++.+....+|+||+|+
T Consensus       125 l~~k~vlVlG-aGG~g~aia~~L~~~-G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaT  202 (283)
T 3jyo_A          125 AKLDSVVQVG-AGGVGNAVAYALVTH-GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT  202 (283)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECS
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECC
Confidence            4688999999 699999998888875 77 799999998887654 33321    1111111122223235799999998


Q ss_pred             CC---c----HHHHHhhccCCEEEEEc
Q 023273          223 GQ---C----DKALKAVKEGGRVVSII  242 (284)
Q Consensus       223 g~---~----~~~~~~l~~~G~~v~~g  242 (284)
                      ..   +    ....+.++++..++.+-
T Consensus       203 p~Gm~~~~~~pi~~~~l~~~~~v~Dlv  229 (283)
T 3jyo_A          203 PMGMPAHPGTAFDVSCLTKDHWVGDVV  229 (283)
T ss_dssp             STTSTTSCSCSSCGGGCCTTCEEEECC
T ss_pred             CCCCCCCCCCCCCHHHhCCCCEEEEec
Confidence            52   1    12345666666555554

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.79  E-value=0.023  Score=46.89  Aligned_cols=71  Identities=21%  Similarity=0.306  Sum_probs=46.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc-EEe--eCCC-cccccC------CCcccEEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAI--DYTK-ENIEDL------PEKFDVVF  219 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~-~~~--~~~~-~~~~~~------~~~~d~vi  219 (284)
                      .++++||+|+++++|.+.++..... |++|+++++..++.  .++++.. ..+  |-.+ +.....      .+++|+++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~--~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv   84 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDA-GAQVVVLDIRGEDV--VADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV   84 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHH-TCEEEEEESSCHHH--HHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCchHHH--HHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            4689999999999999988877774 99999999854433  3344432 222  2111 111111      24799999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +++|
T Consensus        85 ~nAg   88 (257)
T 3tl3_A           85 NCAG   88 (257)
T ss_dssp             ECGG
T ss_pred             ECCC
Confidence            9987

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.78  E-value=0.033  Score=47.76  Aligned_cols=73  Identities=26%  Similarity=0.382  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---------ChhhHHHH----HHcCCcEEeeCCCcc-ccc-----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---------STAKLDLL----RSLGADLAIDYTKEN-IED-----  210 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---------~~~~~~~~----~~~g~~~~~~~~~~~-~~~-----  210 (284)
                      .++++||+|++|++|...++.+... |++|++.++         +.++.+.+    +..+.....|..+.. ...     
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~-Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAER-GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence            5789999999999999988888774 999998754         44444332    333433334433221 111     


Q ss_pred             --CCCcccEEEeCCC
Q 023273          211 --LPEKFDVVFDAVG  223 (284)
Q Consensus       211 --~~~~~d~vid~~g  223 (284)
                        ..+++|++|+++|
T Consensus        87 ~~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           87 LDTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHHTSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence              1357999999987

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=95.75  E-value=0.026  Score=46.57  Aligned_cols=94  Identities=19%  Similarity=0.217  Sum_probs=63.6

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCccccc---CCCcccEE
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIED---LPEKFDVV  218 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~---~~~~~d~v  218 (284)
                      ..++.+||-+|+  +.|..++.+++...+.+|+.++.+++..+.+++    ++..  .++..+..++..   ..+.||+|
T Consensus        78 ~~~~~~vLDiG~--G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I  155 (249)
T 3g89_A           78 WQGPLRVLDLGT--GAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARA  155 (249)
T ss_dssp             CCSSCEEEEETC--TTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEE
T ss_pred             cCCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEE
Confidence            467889999983  356666777776446899999999998887754    3432  233333222221   13579999


Q ss_pred             EeCC-CC----cHHHHHhhccCCEEEEEcC
Q 023273          219 FDAV-GQ----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       219 id~~-g~----~~~~~~~l~~~G~~v~~g~  243 (284)
                      +... ..    .+.+.+.|+++|+++.+.+
T Consensus       156 ~s~a~~~~~~ll~~~~~~LkpgG~l~~~~g  185 (249)
T 3g89_A          156 VARAVAPLCVLSELLLPFLEVGGAAVAMKG  185 (249)
T ss_dssp             EEESSCCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred             EECCcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence            8753 33    2667789999999998754

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.74  E-value=0.02  Score=47.60  Aligned_cols=73  Identities=26%  Similarity=0.368  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHhcCCeEEEEeCChhh-HHHHH-HcCCc-EEe--eCCCc-ccccC-------CC-
Q 023273          150 AGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLR-SLGAD-LAI--DYTKE-NIEDL-------PE-  213 (284)
Q Consensus       150 ~g~~vlI~ga--~g~~G~~a~~~a~~~~g~~vi~~~~~~~~-~~~~~-~~g~~-~~~--~~~~~-~~~~~-------~~-  213 (284)
                      .+++++|+|+  +|++|.+.++.+... |++|+++++++++ .+.+. +++.. ..+  |-.+. .....       .+ 
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQ-GAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHT-TCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHC-CCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999998  899999988888774 9999999987765 24443 34321 122  22211 11111       12 


Q ss_pred             --cccEEEeCCC
Q 023273          214 --KFDVVFDAVG  223 (284)
Q Consensus       214 --~~d~vid~~g  223 (284)
                        ++|++|+++|
T Consensus        85 ~~~iD~lv~nAg   96 (269)
T 2h7i_A           85 GNKLDGVVHSIG   96 (269)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCceEEEECCc
Confidence              7999999876

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.72  E-value=0.023  Score=46.76  Aligned_cols=76  Identities=24%  Similarity=0.321  Sum_probs=46.3

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEe-CChhhHH----HHHHcCCc-EEeeCCCcc---ccc-------
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLD----LLRSLGAD-LAIDYTKEN---IED-------  210 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~-~~~~~~~----~~~~~g~~-~~~~~~~~~---~~~-------  210 (284)
                      ...+++++||+|+++++|.+.++..... |++|++++ ++.++..    .+++.+.. ..+..+-.+   ...       
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKD-GFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHT-TEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            3457889999999999999988887774 99999887 4444332    22334432 222221111   111       


Q ss_pred             CCCcccEEEeCCC
Q 023273          211 LPEKFDVVFDAVG  223 (284)
Q Consensus       211 ~~~~~d~vid~~g  223 (284)
                      ..+++|++|+++|
T Consensus        88 ~~g~id~lv~~Ag  100 (256)
T 3ezl_A           88 EVGEIDVLVNNAG  100 (256)
T ss_dssp             HTCCEEEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence            1347999999987

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=95.72  E-value=0.016  Score=48.94  Aligned_cols=87  Identities=21%  Similarity=0.303  Sum_probs=57.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHH-HHcCC---cEEeeCCCcccccCCCcccEEEeCCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGA---DLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~-~~~g~---~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      -.+++++|+| +|++|.+++..+... |+ +++++.++.++.+.+ ++++.   ......     .+...++|+||+|++
T Consensus       124 l~~k~vlvlG-aGg~g~aia~~L~~~-G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~-----~~l~~~aDiIInaTp  196 (281)
T 3o8q_A          124 LKGATILLIG-AGGAARGVLKPLLDQ-QPASITVTNRTFAKAEQLAELVAAYGEVKAQAF-----EQLKQSYDVIINSTS  196 (281)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTT-CCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEG-----GGCCSCEEEEEECSC
T ss_pred             ccCCEEEEEC-chHHHHHHHHHHHhc-CCCeEEEEECCHHHHHHHHHHhhccCCeeEeeH-----HHhcCCCCEEEEcCc
Confidence            3688999999 689999988888775 75 899999998886555 34432   122222     222368999999986


Q ss_pred             Cc---H---HHHHhhccCCEEEEEc
Q 023273          224 QC---D---KALKAVKEGGRVVSII  242 (284)
Q Consensus       224 ~~---~---~~~~~l~~~G~~v~~g  242 (284)
                      ..   +   .-.+.++++..++.+.
T Consensus       197 ~gm~~~~~~l~~~~l~~~~~V~Dlv  221 (281)
T 3o8q_A          197 ASLDGELPAIDPVIFSSRSVCYDMM  221 (281)
T ss_dssp             CCC----CSCCGGGEEEEEEEEESC
T ss_pred             CCCCCCCCCCCHHHhCcCCEEEEec
Confidence            31   1   1234566555555554

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=95.71  E-value=0.12  Score=44.50  Aligned_cols=117  Identities=15%  Similarity=0.204  Sum_probs=72.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHH-HhcCCeEE-EEeCChhhHHHH-HHcCCcEEeeCCCcccccC--CCcccEEEeCCCC-
Q 023273          151 GKSILVLGGAGGVGTMVIQLAK-HVFGASKV-AATSSTAKLDLL-RSLGADLAIDYTKENIEDL--PEKFDVVFDAVGQ-  224 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~-~~~g~~vi-~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~--~~~~d~vid~~g~-  224 (284)
                      .-+|.|+| +|.+|...+..++ ...+.+++ +.++++++.+.+ +++|...+++.    +.+.  ..++|+|+.|+.. 
T Consensus         8 ~~~v~iiG-~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~----~~~~l~~~~~D~V~i~tp~~   82 (346)
T 3cea_A            8 PLRAAIIG-LGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTN----YKDMIDTENIDAIFIVAPTP   82 (346)
T ss_dssp             CEEEEEEC-CSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESC----HHHHHTTSCCSEEEECSCGG
T ss_pred             cceEEEEc-CCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCC----HHHHhcCCCCCEEEEeCChH
Confidence            35899999 7999988777766 43466655 557787777554 55676444332    2222  2479999999985 


Q ss_pred             --cHHHHHhhccCCEEEEEcCCCC--------------CC-ceeEEEec---cHHHHHHHHHHHHCCCe
Q 023273          225 --CDKALKAVKEGGRVVSIIGSVT--------------PP-ASSFVLTS---DGSILEKLNPYFESGKV  273 (284)
Q Consensus       225 --~~~~~~~l~~~G~~v~~g~~~~--------------~~-~~~~~~~~---~~~~~~~~~~~~~~g~i  273 (284)
                        .+.+..+|+. |+-|++..|..              .. ...+....   ....+..+.+++++|+|
T Consensus        83 ~h~~~~~~al~~-G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~~g~i  150 (346)
T 3cea_A           83 FHPEMTIYAMNA-GLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDI  150 (346)
T ss_dssp             GHHHHHHHHHHT-TCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHHTTTT
T ss_pred             hHHHHHHHHHHC-CCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHHcCCC
Confidence              3667777776 56566654421              11 22222111   23457888888888776

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.71  E-value=0.069  Score=47.54  Aligned_cols=91  Identities=19%  Similarity=0.294  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe-eCCCc-ccccC-CCcccEEEeCCCCc-
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKE-NIEDL-PEKFDVVFDAVGQC-  225 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~-~~~~~-~~~~d~vid~~g~~-  225 (284)
                      .+++|+|+| .|.+|...++.++.. |..+++++.++++.+.+++.|...++ |.... .+... .+.+|+++-++++. 
T Consensus         3 ~~~~viIiG-~Gr~G~~va~~L~~~-g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~   80 (413)
T 3l9w_A            3 HGMRVIIAG-FGRFGQITGRLLLSS-GVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQ   80 (413)
T ss_dssp             -CCSEEEEC-CSHHHHHHHHHHHHT-TCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChH
Confidence            457899999 799999999999984 99999999999999999988865443 22222 23232 46799999999863 


Q ss_pred             -----HHHHHhhccCCEEEEEc
Q 023273          226 -----DKALKAVKEGGRVVSII  242 (284)
Q Consensus       226 -----~~~~~~l~~~G~~v~~g  242 (284)
                           -...+.+.+.-+++.-.
T Consensus        81 ~n~~i~~~ar~~~p~~~Iiara  102 (413)
T 3l9w_A           81 TNLQLTEMVKEHFPHLQIIARA  102 (413)
T ss_dssp             HHHHHHHHHHHHCTTCEEEEEE
T ss_pred             HHHHHHHHHHHhCCCCeEEEEE
Confidence                 34455666776776553

>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=95.71  E-value=0.098  Score=40.47  Aligned_cols=91  Identities=19%  Similarity=0.138  Sum_probs=62.2

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-cEEeeCCCcccccCCCcccEEEeCCCC--
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDAVGQ--  224 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~d~vid~~g~--  224 (284)
                      +.++.+||-+| +| .|..+..+++.  +.+++.++.+++..+.+++... ..++..+........+.+|+|+.....  
T Consensus        44 ~~~~~~vLdiG-~G-~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~  119 (195)
T 3cgg_A           44 APRGAKILDAG-CG-QGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMG  119 (195)
T ss_dssp             SCTTCEEEEET-CT-TTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGG
T ss_pred             ccCCCeEEEEC-CC-CCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHh
Confidence            56889999999 44 57777777775  7799999999998888876432 233333222222223579999875211  


Q ss_pred             ----------cHHHHHhhccCCEEEEEc
Q 023273          225 ----------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ----------~~~~~~~l~~~G~~v~~g  242 (284)
                                ...+.+.|+++|++++..
T Consensus       120 ~~~~~~~~~~l~~~~~~l~~~G~l~~~~  147 (195)
T 3cgg_A          120 FLAEDGREPALANIHRALGADGRAVIGF  147 (195)
T ss_dssp             GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence                      256778899999998754

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=95.66  E-value=0.012  Score=51.21  Aligned_cols=74  Identities=22%  Similarity=0.183  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEee--CC-C-cccccCCCcccEEEeCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID--YT-K-ENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~--~~-~-~~~~~~~~~~d~vid~~g  223 (284)
                      .+.+|||+||+|.+|...++.+....|.+|+++++++++...+.......++.  .. + +.+...-+++|+||.+++
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~  100 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA  100 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence            45799999999999999888877633899999999877655443322222222  21 1 112222358999999877

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=95.64  E-value=0.034  Score=44.14  Aligned_cols=92  Identities=20%  Similarity=0.224  Sum_probs=63.6

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc-CCcEEeeCCCcccccCCCcccEEEeCCC-
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-GADLAIDYTKENIEDLPEKFDVVFDAVG-  223 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~d~vid~~g-  223 (284)
                      ..+.++.+||-+|+  +.|..+..+++.  +.+++.++.+++..+.+++. +.. ++..+...+. ..+.+|+|+.... 
T Consensus        39 ~~~~~~~~vLDiGc--G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~-~~~~d~~~~~-~~~~fD~v~~~~~l  112 (211)
T 3e23_A           39 GELPAGAKILELGC--GAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLGRP-VRTMLFHQLD-AIDAYDAVWAHACL  112 (211)
T ss_dssp             TTSCTTCEEEESSC--TTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSC-CEECCGGGCC-CCSCEEEEEECSCG
T ss_pred             HhcCCCCcEEEECC--CCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcCCc-eEEeeeccCC-CCCcEEEEEecCch
Confidence            35678899999983  457777777775  77999999999988888754 322 2222222222 3567999987542 


Q ss_pred             ------C----cHHHHHhhccCCEEEEEcC
Q 023273          224 ------Q----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       224 ------~----~~~~~~~l~~~G~~v~~g~  243 (284)
                            .    +..+.+.|+++|++++...
T Consensus       113 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  142 (211)
T 3e23_A          113 LHVPRDELADVLKLIWRALKPGGLFYASYK  142 (211)
T ss_dssp             GGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             hhcCHHHHHHHHHHHHHhcCCCcEEEEEEc
Confidence                  1    2578889999999987743

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=95.64  E-value=0.0078  Score=50.11  Aligned_cols=68  Identities=18%  Similarity=0.207  Sum_probs=46.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe--eCCC-cccccCCCcccEEEeCCC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTK-ENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~-~~~~~~~~~~d~vid~~g  223 (284)
                      +++|+|+||+|.+|...++.+... |.+|+++++++++..   . .....+  |-.+ +.+...-+++|++|+++|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~---~-~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag   73 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPM-AEILRLADLSPLDPA---G-PNEECVQCDLADANAVNAMVAGCDGIVHLGG   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGG-EEEEEEEESSCCCCC---C-TTEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhc-CCEEEEEecCCcccc---C-CCCEEEEcCCCCHHHHHHHHcCCCEEEECCC
Confidence            468999999999999988888874 899999998776543   1 111222  2111 122233458999999987

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=95.64  E-value=0.028  Score=47.50  Aligned_cols=87  Identities=26%  Similarity=0.450  Sum_probs=56.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC-----hhhHHHHHH---cCCcEEe--eCCC-cccccCCCcccEEE
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-----TAKLDLLRS---LGADLAI--DYTK-ENIEDLPEKFDVVF  219 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~-----~~~~~~~~~---~g~~~~~--~~~~-~~~~~~~~~~d~vi  219 (284)
                      ..+|+|+||+|.+|...++.+... |.+|++++++     +++.+.+++   .+.. ++  |..+ +.+...-+++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~l~~~~~~~d~vi   81 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISL-GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASLDDHQRLVDALKQVDVVI   81 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCSSCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhC-CCcEEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCCCCHHHHHHHHhCCCEEE
Confidence            467999999999999999988884 8999999987     344444332   2332 22  2221 22333345899999


Q ss_pred             eCCCCc---------HHHHHhhccCC---EEE
Q 023273          220 DAVGQC---------DKALKAVKEGG---RVV  239 (284)
Q Consensus       220 d~~g~~---------~~~~~~l~~~G---~~v  239 (284)
                      .+++..         ..+++.++..|   ++|
T Consensus        82 ~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           82 SALAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             ECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             ECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            998731         34555554444   776

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=95.63  E-value=0.034  Score=46.23  Aligned_cols=74  Identities=23%  Similarity=0.365  Sum_probs=46.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEe-CChhhHHHH----HHcCCc-EEeeCCCcc---cccC-------C
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLL----RSLGAD-LAIDYTKEN---IEDL-------P  212 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~-~~~~~~~~~----~~~g~~-~~~~~~~~~---~~~~-------~  212 (284)
                      ..+++++|+|+++++|.+.++..... |++|+++. ++.++.+..    +..+.. ..+.-+-.+   ....       .
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDA-GMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999988888774 99999988 454444332    222322 222221111   1111       2


Q ss_pred             CcccEEEeCCC
Q 023273          213 EKFDVVFDAVG  223 (284)
Q Consensus       213 ~~~d~vid~~g  223 (284)
                      +.+|++|+++|
T Consensus       102 g~id~li~nAg  112 (269)
T 3gk3_A          102 GKVDVLINNAG  112 (269)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=95.63  E-value=0.02  Score=46.57  Aligned_cols=95  Identities=16%  Similarity=0.142  Sum_probs=63.2

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC---cEEeeCCCcc-cc-cCCCcc
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA---DLAIDYTKEN-IE-DLPEKF  215 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~---~~~~~~~~~~-~~-~~~~~~  215 (284)
                      .....++.+||-+|+  +.|..+..+++...+.+++.++.+++..+.+++    .+.   -.++..+... +. ...+.|
T Consensus        66 ~~~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~f  143 (232)
T 3ntv_A           66 LIRMNNVKNILEIGT--AIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVY  143 (232)
T ss_dssp             HHHHHTCCEEEEECC--SSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCE
T ss_pred             HHhhcCCCEEEEEeC--chhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCc
Confidence            344567889999983  457777788875336899999999998877754    342   1233332212 23 334679


Q ss_pred             cEEEeCCC--C----cHHHHHhhccCCEEEEE
Q 023273          216 DVVFDAVG--Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       216 d~vid~~g--~----~~~~~~~l~~~G~~v~~  241 (284)
                      |+|+-...  .    ++.+.+.|+++|.++.-
T Consensus       144 D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d  175 (232)
T 3ntv_A          144 DMIFIDAAKAQSKKFFEIYTPLLKHQGLVITD  175 (232)
T ss_dssp             EEEEEETTSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred             cEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            99875432  2    26778899999999763

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=95.62  E-value=0.021  Score=47.74  Aligned_cols=71  Identities=27%  Similarity=0.335  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEe--eCCCc-cccc------CCCcccEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAI--DYTKE-NIED------LPEKFDVV  218 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~--~~~~~-~~~~------~~~~~d~v  218 (284)
                      .++++||+|+++++|.+.++..... |++|+++++++++.+.+. +++.. .++  |-.+. ....      ..+++|++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHAD-GLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            5789999999999999988888774 999999999988876653 44432 222  21111 1111      12478999


Q ss_pred             EeC
Q 023273          219 FDA  221 (284)
Q Consensus       219 id~  221 (284)
                      +.+
T Consensus       108 v~~  110 (281)
T 3ppi_A          108 VVA  110 (281)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            887

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.62  E-value=0.015  Score=49.90  Aligned_cols=92  Identities=16%  Similarity=0.143  Sum_probs=57.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCC---hhhHHHHH-Hc----CC-cEEeeCCC-cccccCCCcccE
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSS---TAKLDLLR-SL----GA-DLAIDYTK-ENIEDLPEKFDV  217 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~---~~~~~~~~-~~----g~-~~~~~~~~-~~~~~~~~~~d~  217 (284)
                      -.+++++|+| +|++|.+++..+... |+ +|+++.++   .++.+.+. ++    +. ...++.++ +.+.+....+|+
T Consensus       152 l~gk~~lVlG-aGG~g~aia~~L~~~-Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDi  229 (315)
T 3tnl_A          152 IIGKKMTICG-AGGAATAICIQAALD-GVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVI  229 (315)
T ss_dssp             CTTSEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             ccCCEEEEEC-CChHHHHHHHHHHHC-CCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCE
Confidence            3688999999 699999988888875 77 89999998   66655442 22    21 12233322 112222347999


Q ss_pred             EEeCCCC---cH-----H-HHHhhccCCEEEEEc
Q 023273          218 VFDAVGQ---CD-----K-ALKAVKEGGRVVSII  242 (284)
Q Consensus       218 vid~~g~---~~-----~-~~~~l~~~G~~v~~g  242 (284)
                      ||+|+..   +.     . ....++++..++.+-
T Consensus       230 IINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~Dlv  263 (315)
T 3tnl_A          230 FTNATGVGMKPFEGETLLPSADMLRPELIVSDVV  263 (315)
T ss_dssp             EEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESC
T ss_pred             EEECccCCCCCCCCCCCCCcHHHcCCCCEEEEec
Confidence            9999752   11     1 345566665555554

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=95.60  E-value=0.014  Score=50.64  Aligned_cols=37  Identities=27%  Similarity=0.308  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH--hcCCeEEEEeCChh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKH--VFGASKVAATSSTA  187 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~--~~g~~vi~~~~~~~  187 (284)
                      .+.+|||+||+|.+|...++.+..  . |.+|+++++++.
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~-g~~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHP-KAKVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCT-TSEEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCC-CCeEEEEECCCc
Confidence            578999999999999998888777  5 899999998554

>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}

Probab=95.58  E-value=0.052  Score=45.04  Aligned_cols=96  Identities=22%  Similarity=0.283  Sum_probs=65.2

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CCc--EEeeCCCcccccCCCcccEE
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD--LAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~~--~~~~~~~~~~~~~~~~~d~v  218 (284)
                      ...+.++.+||-+| + +.|..+..+++...+.+++.++.+++..+.+++.    +..  .++..+...+....+.+|+|
T Consensus        32 ~~~~~~~~~vLDiG-~-G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v  109 (276)
T 3mgg_A           32 DTVYPPGAKVLEAG-C-GIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHI  109 (276)
T ss_dssp             TCCCCTTCEEEETT-C-TTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEE
T ss_pred             cccCCCCCeEEEec-C-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEE
Confidence            45668899999998 3 3577778888873368999999999888777542    321  22222222222224679999


Q ss_pred             EeCCC-----C----cHHHHHhhccCCEEEEEc
Q 023273          219 FDAVG-----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       219 id~~g-----~----~~~~~~~l~~~G~~v~~g  242 (284)
                      +....     +    ...+.+.|+++|.+++..
T Consensus       110 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  142 (276)
T 3mgg_A          110 FVCFVLEHLQSPEEALKSLKKVLKPGGTITVIE  142 (276)
T ss_dssp             EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEechhhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            86532     2    267888999999999864

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.58  E-value=0.03  Score=47.94  Aligned_cols=73  Identities=16%  Similarity=0.170  Sum_probs=47.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH----HHH-cC-CcEEeeCCC---cccccC--CCcccEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL----LRS-LG-ADLAIDYTK---ENIEDL--PEKFDVV  218 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~----~~~-~g-~~~~~~~~~---~~~~~~--~~~~d~v  218 (284)
                      .+.+|||+||+|.+|...++.+... |.+|++++++.++...    +.. .+ ....+..+-   +.+.+.  ..++|++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   82 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAH-GYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA   82 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHC-CCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence            4579999999999999999888884 9999999886554322    111 12 112222111   112222  1379999


Q ss_pred             EeCCC
Q 023273          219 FDAVG  223 (284)
Q Consensus       219 id~~g  223 (284)
                      |++++
T Consensus        83 ih~A~   87 (341)
T 3enk_A           83 IHFAA   87 (341)
T ss_dssp             EECCC
T ss_pred             EECcc
Confidence            99987

>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*

Probab=95.56  E-value=0.063  Score=41.90  Aligned_cols=93  Identities=16%  Similarity=0.168  Sum_probs=61.8

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CC--cEEeeCCCcccccCCCcccEE
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA--DLAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~--~~~~~~~~~~~~~~~~~~d~v  218 (284)
                      .....++++||-+| +| .|..+..+++.  +.+++.++.+++..+.+++.    +.  ..++..+...... .+.+|+|
T Consensus        27 ~~~~~~~~~vLdiG-~G-~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v  101 (199)
T 2xvm_A           27 AVKVVKPGKTLDLG-CG-NGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFI  101 (199)
T ss_dssp             HTTTSCSCEEEEET-CT-TSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEE
T ss_pred             HhhccCCCeEEEEc-CC-CCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEE
Confidence            34556788999998 44 57777777775  77999999999888777542    22  1223222222222 5679999


Q ss_pred             EeCCC-------C----cHHHHHhhccCCEEEEEc
Q 023273          219 FDAVG-------Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       219 id~~g-------~----~~~~~~~l~~~G~~v~~g  242 (284)
                      +....       .    ...+.+.|+++|+++++.
T Consensus       102 ~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  136 (199)
T 2xvm_A          102 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  136 (199)
T ss_dssp             EEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence            86532       1    256778999999987764

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.54  E-value=0.034  Score=48.46  Aligned_cols=85  Identities=20%  Similarity=0.245  Sum_probs=60.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~-----  224 (284)
                      .|++|.|+| .|.+|...++.++.. |.+|++.+++. +.+.+.+.|...+     .++.+..+..|+|+-+...     
T Consensus       159 ~g~tvGIIG-lG~IG~~vA~~l~~~-G~~V~~~d~~~-~~~~~~~~g~~~~-----~~l~ell~~aDiV~l~~Plt~~t~  230 (352)
T 3gg9_A          159 KGQTLGIFG-YGKIGQLVAGYGRAF-GMNVLVWGREN-SKERARADGFAVA-----ESKDALFEQSDVLSVHLRLNDETR  230 (352)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSHH-HHHHHHHTTCEEC-----SSHHHHHHHCSEEEECCCCSTTTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhC-CCEEEEECCCC-CHHHHHhcCceEe-----CCHHHHHhhCCEEEEeccCcHHHH
Confidence            478999999 899999999999994 99999999875 3344556665321     1223334567888776541     


Q ss_pred             ---cHHHHHhhccCCEEEEEc
Q 023273          225 ---CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g  242 (284)
                         ....+..|+++..+|.++
T Consensus       231 ~li~~~~l~~mk~gailIN~a  251 (352)
T 3gg9_A          231 SIITVADLTRMKPTALFVNTS  251 (352)
T ss_dssp             TCBCHHHHTTSCTTCEEEECS
T ss_pred             HhhCHHHHhhCCCCcEEEECC
Confidence               156777888888888775

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.53  E-value=0.056  Score=45.33  Aligned_cols=93  Identities=23%  Similarity=0.234  Sum_probs=61.0

Q ss_pred             ccchHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc
Q 023273          132 LPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED  210 (284)
Q Consensus       132 ~~~~~~ta~~al~~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  210 (284)
                      +||........++..+ .-.|.+++|+|.++.+|..++.++... +++|+++.+..+.                   +.+
T Consensus       141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~hs~t~~-------------------L~~  200 (285)
T 3l07_A          141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-KATVTTCHRFTTD-------------------LKS  200 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTCSS-------------------HHH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCCchh-------------------HHH
Confidence            3444434444444443 358999999996666899999999985 9988877543222                   222


Q ss_pred             CCCcccEEEeCCCCcH-HHHHhhccCCEEEEEcCC
Q 023273          211 LPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       211 ~~~~~d~vid~~g~~~-~~~~~l~~~G~~v~~g~~  244 (284)
                      ..+..|++|.++|.++ ---+.++++..++.+|..
T Consensus       201 ~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~  235 (285)
T 3l07_A          201 HTTKADILIVAVGKPNFITADMVKEGAVVIDVGIN  235 (285)
T ss_dssp             HHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCE
T ss_pred             hcccCCEEEECCCCCCCCCHHHcCCCcEEEEeccc
Confidence            2356888888888531 122456777777777654

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.52  E-value=0.043  Score=45.57  Aligned_cols=84  Identities=21%  Similarity=0.271  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcEEeeCCCcccccCCCcccEEEeCCCCcH--
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCD--  226 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~~--  226 (284)
                      .+ +++|+| +|.+|.+.+..+... |.++++.+++.++.+.+ ++++..  +    .++.+. +..|+|+.|++...  
T Consensus       116 ~~-~v~iiG-~G~~g~~~a~~l~~~-g~~v~v~~r~~~~~~~l~~~~~~~--~----~~~~~~-~~~Divi~~tp~~~~~  185 (263)
T 2d5c_A          116 KG-PALVLG-AGGAGRAVAFALREA-GLEVWVWNRTPQRALALAEEFGLR--A----VPLEKA-REARLLVNATRVGLED  185 (263)
T ss_dssp             CS-CEEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSHHHHHHHHHHHTCE--E----CCGGGG-GGCSEEEECSSTTTTC
T ss_pred             CC-eEEEEC-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccc--h----hhHhhc-cCCCEEEEccCCCCCC
Confidence            46 999999 799999998888875 77899999988876544 455643  2    123445 78999999987421  


Q ss_pred             ---HH--HHhhccCCEEEEEcC
Q 023273          227 ---KA--LKAVKEGGRVVSIIG  243 (284)
Q Consensus       227 ---~~--~~~l~~~G~~v~~g~  243 (284)
                         ..  ...++++..++.++.
T Consensus       186 ~~~~~l~~~~l~~g~~viD~~~  207 (263)
T 2d5c_A          186 PSASPLPAELFPEEGAAVDLVY  207 (263)
T ss_dssp             TTCCSSCGGGSCSSSEEEESCC
T ss_pred             CCCCCCCHHHcCCCCEEEEeec
Confidence               11  456777776666553

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=95.51  E-value=0.022  Score=49.11  Aligned_cols=88  Identities=22%  Similarity=0.321  Sum_probs=56.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh----hhHHHHH---HcCCcEEeeCC--C-cccccCCC--cccEE
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST----AKLDLLR---SLGADLAIDYT--K-ENIEDLPE--KFDVV  218 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~----~~~~~~~---~~g~~~~~~~~--~-~~~~~~~~--~~d~v  218 (284)
                      ..+|+|+||+|.+|...++.+... |.+|+++++++    ++.+.+.   ..+.. ++.-+  + +.+.+.-+  ++|+|
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~-~~~~Dl~d~~~l~~~~~~~~~d~V   87 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDA-HRPTYILARPGPRSPSKAKIFKALEDKGAI-IVYGLINEQEAMEKILKEHEIDIV   87 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHT-TCCEEEEECSSCCCHHHHHHHHHHHHTTCE-EEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHC-CCCEEEEECCCCCChhHHHHHHHHHhCCcE-EEEeecCCHHHHHHHHhhCCCCEE
Confidence            468999999999999999988885 89999999966    4444333   33333 33222  1 12222334  89999


Q ss_pred             EeCCCC--c---HHHHHhhccCC---EEEE
Q 023273          219 FDAVGQ--C---DKALKAVKEGG---RVVS  240 (284)
Q Consensus       219 id~~g~--~---~~~~~~l~~~G---~~v~  240 (284)
                      |.+++.  .   ..+++.++..|   +++.
T Consensus        88 i~~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           88 VSTVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             EECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             EECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            999883  1   44555555444   6653

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=95.50  E-value=0.02  Score=44.85  Aligned_cols=90  Identities=16%  Similarity=0.136  Sum_probs=57.1

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcC---------CeEEEEeCChhhHHHHHHcCCcEEe-eCCCcccc------
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFG---------ASKVAATSSTAKLDLLRSLGADLAI-DYTKENIE------  209 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g---------~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~------  209 (284)
                      ..++++++||.+| +|+ |..+..+++..+.         .++++++.++...     ......+ ..+.....      
T Consensus        18 ~~~~~~~~vLDlG-cG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~   90 (196)
T 2nyu_A           18 QILRPGLRVLDCG-AAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRIL   90 (196)
T ss_dssp             CCCCTTCEEEEET-CCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHH
T ss_pred             CCCCCCCEEEEeC-CCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHH
Confidence            3468899999999 676 8899999988522         7899999887431     1111222 21111110      


Q ss_pred             -cC-CCcccEEEe-----CCCC---------------cHHHHHhhccCCEEEEEc
Q 023273          210 -DL-PEKFDVVFD-----AVGQ---------------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       210 -~~-~~~~d~vid-----~~g~---------------~~~~~~~l~~~G~~v~~g  242 (284)
                       .. .+.+|+|+.     +++.               ...+.+.|+++|++++..
T Consensus        91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence             01 247999985     3332               134678999999998764

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.49  E-value=0.1  Score=43.42  Aligned_cols=82  Identities=13%  Similarity=0.104  Sum_probs=56.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc-EEeeCCCcccccCCCcccEEEeCCCCc--H---
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPEKFDVVFDAVGQC--D---  226 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~d~vid~~g~~--~---  226 (284)
                      +|.|+| +|.+|.+.+..+... |.+|+++++++++.+.+++.|.. ...    .+..+. .+.|+||-|+...  .   
T Consensus         2 ~i~iiG-~G~~G~~~a~~l~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~-~~~D~vi~av~~~~~~~~~   74 (279)
T 2f1k_A            2 KIGVVG-LGLIGASLAGDLRRR-GHYLIGVSRQQSTCEKAVERQLVDEAG----QDLSLL-QTAKIIFLCTPIQLILPTL   74 (279)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTSCSEEE----SCGGGG-TTCSEEEECSCHHHHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhCCCCcccc----CCHHHh-CCCCEEEEECCHHHHHHHH
Confidence            688999 899999988887774 88999999999988888877743 221    123334 6788888888741  2   


Q ss_pred             -HHHHhhccCCEEEEE
Q 023273          227 -KALKAVKEGGRVVSI  241 (284)
Q Consensus       227 -~~~~~l~~~G~~v~~  241 (284)
                       .....++++..++.+
T Consensus        75 ~~l~~~~~~~~~vv~~   90 (279)
T 2f1k_A           75 EKLIPHLSPTAIVTDV   90 (279)
T ss_dssp             HHHGGGSCTTCEEEEC
T ss_pred             HHHHhhCCCCCEEEEC
Confidence             222334455555544

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=95.48  E-value=0.089  Score=44.60  Aligned_cols=68  Identities=18%  Similarity=0.108  Sum_probs=51.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~  224 (284)
                      ..+|.|+| .|.+|...+..+... |.+|++.++++++.+.+.+.|.......    ..+.....|+||-|+..
T Consensus         7 ~~~I~iIG-~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~~~~----~~e~~~~aDvvi~~vp~   74 (303)
T 3g0o_A            7 DFHVGIVG-LGSMGMGAARSCLRA-GLSTWGADLNPQACANLLAEGACGAAAS----AREFAGVVDALVILVVN   74 (303)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCSEEESS----STTTTTTCSEEEECCSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHcCCccccCC----HHHHHhcCCEEEEECCC
Confidence            35799999 899999988887774 8999999999999998888776531211    22223567888887765

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.48  E-value=0.043  Score=47.33  Aligned_cols=84  Identities=17%  Similarity=0.333  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~-----  224 (284)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.+++.++.+.+.+.+....      ++.+.....|+|+.++..     
T Consensus       154 ~g~~vgIIG-~G~iG~~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~~~------~l~e~l~~aDvVi~~vp~~~~t~  225 (330)
T 2gcg_A          154 TQSTVGIIG-LGRIGQAIARRLKPF-GVQRFLYTGRQPRPEEAAEFQAEFV------STPELAAQSDFIVVACSLTPATE  225 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGG-TCCEEEEESSSCCHHHHHTTTCEEC------CHHHHHHHCSEEEECCCCCTTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCCcchhHHHhcCceeC------CHHHHHhhCCEEEEeCCCChHHH
Confidence            478999999 899999999999984 9999999987766665555553211      122222456777766542     


Q ss_pred             --c-HHHHHhhccCCEEEEE
Q 023273          225 --C-DKALKAVKEGGRVVSI  241 (284)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~  241 (284)
                        . ...+..|+++..++.+
T Consensus       226 ~~i~~~~~~~mk~gailIn~  245 (330)
T 2gcg_A          226 GLCNKDFFQKMKETAVFINI  245 (330)
T ss_dssp             TCBSHHHHHHSCTTCEEEEC
T ss_pred             HhhCHHHHhcCCCCcEEEEC
Confidence              1 3455666666666554

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.46  E-value=0.03  Score=48.08  Aligned_cols=86  Identities=14%  Similarity=0.139  Sum_probs=58.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---  224 (284)
                      -.|.+|.|+| .|.+|...++.++.. |.+|++.++ ++++. .+++.|... .    .++.+.....|+|+.++..   
T Consensus       144 l~g~~vgIIG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~~~-~~~~~g~~~-~----~~l~ell~~aDvVil~~p~~~~  215 (320)
T 1gdh_A          144 LDNKTLGIYG-FGSIGQALAKRAQGF-DMDIDYFDTHRASSS-DEASYQATF-H----DSLDSLLSVSQFFSLNAPSTPE  215 (320)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSSCCCHH-HHHHHTCEE-C----SSHHHHHHHCSEEEECCCCCTT
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCCcChh-hhhhcCcEE-c----CCHHHHHhhCCEEEEeccCchH
Confidence            3678999999 899999999999984 999999998 77653 455566431 1    1122223457777776542   


Q ss_pred             ----c-HHHHHhhccCCEEEEEc
Q 023273          225 ----C-DKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ----~-~~~~~~l~~~G~~v~~g  242 (284)
                          . ...+..|++++.++.++
T Consensus       216 t~~~i~~~~l~~mk~gailIn~a  238 (320)
T 1gdh_A          216 TRYFFNKATIKSLPQGAIVVNTA  238 (320)
T ss_dssp             TTTCBSHHHHTTSCTTEEEEECS
T ss_pred             HHhhcCHHHHhhCCCCcEEEECC
Confidence                1 34556677766666654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.46  E-value=0.028  Score=46.49  Aligned_cols=73  Identities=21%  Similarity=0.317  Sum_probs=46.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh-hhHHHHHHc----CCc-EEe--eCCC-cccccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSL----GAD-LAI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~~~~~~~----g~~-~~~--~~~~-~~~~~~-------~~  213 (284)
                      .+++++|+|++|++|.+.++..... |++|+++.+++ +..+.+++.    +.. .++  |-.+ +.+...       .+
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAK-GYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            3578999999999999988888774 99999987654 334444322    211 222  2211 111111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++|+++|
T Consensus        85 ~id~lv~~Ag   94 (264)
T 3i4f_A           85 KIDFLINNAG   94 (264)
T ss_dssp             CCCEEECCCC
T ss_pred             CCCEEEECCc
Confidence            7999999988

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=95.43  E-value=0.044  Score=43.75  Aligned_cols=94  Identities=18%  Similarity=0.192  Sum_probs=64.6

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccc---ccC-CCcccEEEeC
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI---EDL-PEKFDVVFDA  221 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~-~~~~d~vid~  221 (284)
                      ....++.+||-+|+  +.|..+..+++.  +.+++.++.+++..+.+++.+.......+...+   ... ...+|+|+..
T Consensus        48 ~~~~~~~~vLdiG~--G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~  123 (227)
T 3e8s_A           48 ILGRQPERVLDLGC--GEGWLLRALADR--GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICAN  123 (227)
T ss_dssp             HHHTCCSEEEEETC--TTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEE
T ss_pred             hhcCCCCEEEEeCC--CCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEEC
Confidence            34567799999983  346777777775  779999999999999988775433333222222   111 3459999875


Q ss_pred             CC----C----cHHHHHhhccCCEEEEEcC
Q 023273          222 VG----Q----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       222 ~g----~----~~~~~~~l~~~G~~v~~g~  243 (284)
                      ..    .    +..+.+.|+++|++++...
T Consensus       124 ~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~  153 (227)
T 3e8s_A          124 FALLHQDIIELLSAMRTLLVPGGALVIQTL  153 (227)
T ss_dssp             SCCCSSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             chhhhhhHHHHHHHHHHHhCCCeEEEEEec
Confidence            32    2    3678889999999998643

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=95.43  E-value=0.025  Score=47.81  Aligned_cols=70  Identities=23%  Similarity=0.256  Sum_probs=45.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCCcccccCCCcccEEEeCCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      ++|||+|++|.+|...++.+... |.+|+++++++++.......+...+ .|..+..+.+.-++ |+||++++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~   71 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVEL-GYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGIKG-DVVFHFAA   71 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTCCC-SEEEECCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhC-CCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhcCC-CEEEECCC
Confidence            47999999999999999988884 9999999986654332211122111 12222223333334 99999987

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.43  E-value=0.035  Score=48.28  Aligned_cols=47  Identities=21%  Similarity=0.301  Sum_probs=38.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH-HhcCCeEEEEeCChhhHHHHHHcCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAK-HVFGASKVAATSSTAKLDLLRSLGA  197 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~-~~~g~~vi~~~~~~~~~~~~~~~g~  197 (284)
                      -.|.+|.|+| .|.+|...++.++ . .|.+|++.++++++.+.+.+.|.
T Consensus       161 l~g~~vgIIG-~G~IG~~vA~~l~~~-~G~~V~~~d~~~~~~~~~~~~g~  208 (348)
T 2w2k_A          161 PRGHVLGAVG-LGAIQKEIARKAVHG-LGMKLVYYDVAPADAETEKALGA  208 (348)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHT-TCCEEEEECSSCCCHHHHHHHTC
T ss_pred             CCCCEEEEEE-ECHHHHHHHHHHHHh-cCCEEEEECCCCcchhhHhhcCc
Confidence            4578999999 8999999999998 8 49999999988776655555554

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.43  E-value=0.048  Score=47.08  Aligned_cols=85  Identities=26%  Similarity=0.370  Sum_probs=57.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC----
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~----  224 (284)
                      -.+.+|.|+| .|.+|...++.++.. |.+|++.++++++ +.+++.|...  .    ++.+.....|+|+.++..    
T Consensus       148 l~g~~vgIIG-~G~iG~~iA~~l~~~-G~~V~~~d~~~~~-~~~~~~g~~~--~----~l~~~l~~aDvVil~vp~~~~t  218 (334)
T 2dbq_A          148 VYGKTIGIIG-LGRIGQAIAKRAKGF-NMRILYYSRTRKE-EVERELNAEF--K----PLEDLLRESDFVVLAVPLTRET  218 (334)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCH-HHHHHHCCEE--C----CHHHHHHHCSEEEECCCCCTTT
T ss_pred             CCCCEEEEEc-cCHHHHHHHHHHHhC-CCEEEEECCCcch-hhHhhcCccc--C----CHHHHHhhCCEEEECCCCChHH
Confidence            3578999999 899999999999984 9999999998776 5555555421  1    122223457777776642    


Q ss_pred             ---c-HHHHHhhccCCEEEEEc
Q 023273          225 ---C-DKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ---~-~~~~~~l~~~G~~v~~g  242 (284)
                         . ...+..|+++..++.++
T Consensus       219 ~~~i~~~~~~~mk~~ailIn~s  240 (334)
T 2dbq_A          219 YHLINEERLKLMKKTAILINIA  240 (334)
T ss_dssp             TTCBCHHHHHHSCTTCEEEECS
T ss_pred             HHhhCHHHHhcCCCCcEEEECC
Confidence               1 34556677776666553

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=95.42  E-value=0.028  Score=47.02  Aligned_cols=87  Identities=21%  Similarity=0.318  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCC--c-EEeeCCCcccccCC-CcccEEEeCCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGA--D-LAIDYTKENIEDLP-EKFDVVFDAVGQ  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~--~-~~~~~~~~~~~~~~-~~~d~vid~~g~  224 (284)
                      .+++++|+| +|++|.+++..+... |.+|+++.++.+|.+.+. +++.  . ...+     +.... +.+|++|++++.
T Consensus       118 ~~~~vlvlG-aGg~g~a~a~~L~~~-G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~-----~~~~~~~~~DivIn~t~~  190 (272)
T 1p77_A          118 PNQHVLILG-AGGATKGVLLPLLQA-QQNIVLANRTFSKTKELAERFQPYGNIQAVS-----MDSIPLQTYDLVINATSA  190 (272)
T ss_dssp             TTCEEEEEC-CSHHHHTTHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGSCEEEEE-----GGGCCCSCCSEEEECCCC
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHccccCCeEEee-----HHHhccCCCCEEEECCCC
Confidence            578999999 589999988888775 799999999988866553 3332  1 1222     12222 479999999984


Q ss_pred             cH------HHHHhhccCCEEEEEcC
Q 023273          225 CD------KALKAVKEGGRVVSIIG  243 (284)
Q Consensus       225 ~~------~~~~~l~~~G~~v~~g~  243 (284)
                      ..      .....++++..++.+..
T Consensus       191 ~~~~~~~~i~~~~l~~~~~v~D~~y  215 (272)
T 1p77_A          191 GLSGGTASVDAEILKLGSAFYDMQY  215 (272)
T ss_dssp             -------CCCHHHHHHCSCEEESCC
T ss_pred             CCCCCCCCCCHHHcCCCCEEEEeeC
Confidence            21      11244566666666654

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=95.42  E-value=0.068  Score=47.19  Aligned_cols=38  Identities=24%  Similarity=0.326  Sum_probs=30.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-hcCCeEEEEeCChh
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKH-VFGASKVAATSSTA  187 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~-~~g~~vi~~~~~~~  187 (284)
                      ..++++||+|+++++|++.+..+.. . |++|+++.++.+
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~-GA~Vv~~~~~~~   83 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGC-GADTLGVFFERP   83 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHH-CCEEEEEECCCC
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhc-CCEEEEEeCCch
Confidence            5678889999999999987776665 5 999998876543

>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}

Probab=95.42  E-value=0.082  Score=47.60  Aligned_cols=97  Identities=19%  Similarity=0.226  Sum_probs=62.7

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHH----cCCc--EEeeCCCccccc-CC-Cc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIED-LP-EK  214 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~-~~-~~  214 (284)
                      ....++++++||-+| +|+ |..+..++..+.+ .++++++.++++.+.+++    +|..  .++..+...+.. .. +.
T Consensus       253 ~~l~~~~g~~VLDlg-aG~-G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~  330 (450)
T 2yxl_A          253 IVLDPKPGETVVDLA-AAP-GGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEV  330 (450)
T ss_dssp             HHHCCCTTCEEEESS-CTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSC
T ss_pred             HhcCCCCcCEEEEeC-CCc-cHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCC
Confidence            345688999999988 444 6666777776534 789999999998877753    3542  223222222221 22 56


Q ss_pred             ccEEEe---CCCC----------------------------cHHHHHhhccCCEEEEEc
Q 023273          215 FDVVFD---AVGQ----------------------------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       215 ~d~vid---~~g~----------------------------~~~~~~~l~~~G~~v~~g  242 (284)
                      ||+|+-   |+|.                            +..++++|+++|+++...
T Consensus       331 fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t  389 (450)
T 2yxl_A          331 ADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT  389 (450)
T ss_dssp             EEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             CCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            999874   4331                            134677889999998654

>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41

Probab=95.41  E-value=0.052  Score=44.78  Aligned_cols=89  Identities=19%  Similarity=0.300  Sum_probs=61.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC-----
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-----  223 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g-----  223 (284)
                      .++.+||-+|+  +.|..+..+++.  +.+++.++.+++..+.+++.....++..+...++...+.+|+|+....     
T Consensus        53 ~~~~~vLDiGc--G~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~  128 (260)
T 2avn_A           53 KNPCRVLDLGG--GTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYV  128 (260)
T ss_dssp             CSCCEEEEETC--TTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHC
T ss_pred             CCCCeEEEeCC--CcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcc
Confidence            37889999983  356777777775  779999999999988887654322333332223222457999986532     


Q ss_pred             -C----cHHHHHhhccCCEEEEE
Q 023273          224 -Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       224 -~----~~~~~~~l~~~G~~v~~  241 (284)
                       +    +..+.+.|+++|++++.
T Consensus       129 ~~~~~~l~~~~~~LkpgG~l~~~  151 (260)
T 2avn_A          129 ENKDKAFSEIRRVLVPDGLLIAT  151 (260)
T ss_dssp             SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccHHHHHHHHHHHcCCCeEEEEE
Confidence             1    26678899999999865

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=95.40  E-value=0.098  Score=44.68  Aligned_cols=97  Identities=21%  Similarity=0.227  Sum_probs=62.7

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCcccccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~d  216 (284)
                      ....++++++||-+|+  +.|..+..++..+. +.++++++.++++.+.+++    .|..  .++..+...+....+.||
T Consensus       112 ~~l~~~~g~~VLDlg~--G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD  189 (315)
T 1ixk_A          112 VALDPKPGEIVADMAA--APGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFD  189 (315)
T ss_dssp             HHHCCCTTCEEEECCS--SCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEE
T ss_pred             HHhCCCCCCEEEEeCC--CCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCC
Confidence            3456789999998874  34556666776542 4789999999998887754    3432  233333222332345799


Q ss_pred             EEEe---CCCC----------------------------cHHHHHhhccCCEEEEEc
Q 023273          217 VVFD---AVGQ----------------------------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       217 ~vid---~~g~----------------------------~~~~~~~l~~~G~~v~~g  242 (284)
                      +|+-   |+|.                            +..+.++|+++|+++...
T Consensus       190 ~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st  246 (315)
T 1ixk_A          190 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST  246 (315)
T ss_dssp             EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence            8874   3331                            135788999999998754

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=95.40  E-value=0.045  Score=50.16  Aligned_cols=64  Identities=19%  Similarity=0.186  Sum_probs=47.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      +.+|||+||+|.+|...+..+... |.+|+++++++.+.+.       ...+.. +......+++|+||++++
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~-G~~V~~l~R~~~~~~~-------v~~d~~-~~~~~~l~~~D~Vih~A~  210 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTG-GHEVIQLVRKEPKPGK-------RFWDPL-NPASDLLDGADVLVHLAG  210 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESSSCCTTC-------EECCTT-SCCTTTTTTCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCCCccc-------eeeccc-chhHHhcCCCCEEEECCC
Confidence            679999999999999999988884 9999999998765321       112222 223333468999999887

>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A

Probab=95.39  E-value=0.066  Score=47.05  Aligned_cols=93  Identities=19%  Similarity=0.226  Sum_probs=63.7

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChhhHHHHHHc---------C-----CcEEeeCCCccc----
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSL---------G-----ADLAIDYTKENI----  208 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~~~---------g-----~~~~~~~~~~~~----  208 (284)
                      ..++.+||-+| + +.|..+..+++.. .+.+++.++.+++.++.+++.         |     ...++..+...+    
T Consensus        81 ~~~~~~VLDlG-c-G~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~  158 (383)
T 4fsd_A           81 SLEGATVLDLG-C-GTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAE  158 (383)
T ss_dssp             GGTTCEEEEES-C-TTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCB
T ss_pred             CCCCCEEEEec-C-ccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcc
Confidence            67899999999 3 3477778888764 256999999999988888753         3     112232222222    


Q ss_pred             --ccCCCcccEEEeCCC-----C----cHHHHHhhccCCEEEEEc
Q 023273          209 --EDLPEKFDVVFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       209 --~~~~~~~d~vid~~g-----~----~~~~~~~l~~~G~~v~~g  242 (284)
                        .-..+.+|+|+....     +    +..+.+.|+++|++++..
T Consensus       159 ~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  203 (383)
T 4fsd_A          159 PEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSD  203 (383)
T ss_dssp             SCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence              112357999986543     2    267889999999998764

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=95.36  E-value=0.023  Score=48.84  Aligned_cols=69  Identities=19%  Similarity=0.204  Sum_probs=45.5

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-cccccCCCcccEEEeCCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~d~vid~~g  223 (284)
                      -..+++|||+||+|.+|...++.+... |.+|+++++++++      .+...+ .|..+ +.+...-.++|+||.+++
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~   86 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQ-GRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGA   86 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHT-TCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhC-CCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEECCc
Confidence            456789999999999999999988884 9999999987665      222211 12211 122233458999999887

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=95.36  E-value=0.041  Score=46.74  Aligned_cols=88  Identities=17%  Similarity=0.333  Sum_probs=56.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh------hhHHHHH---HcCCcEE-eeCCC-cccccCCCcccEEE
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST------AKLDLLR---SLGADLA-IDYTK-ENIEDLPEKFDVVF  219 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~------~~~~~~~---~~g~~~~-~~~~~-~~~~~~~~~~d~vi  219 (284)
                      ..+|+|+||+|.+|...++.+... |.+|+++++++      ++.+.++   ..+...+ .|..+ +.+...-+++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi   82 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSF-SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI   82 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhC-CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence            457999999999999999888884 89999999875      3333332   3343222 12222 22333346799999


Q ss_pred             eCCCC-----cHHHHHhhccC---CEEE
Q 023273          220 DAVGQ-----CDKALKAVKEG---GRVV  239 (284)
Q Consensus       220 d~~g~-----~~~~~~~l~~~---G~~v  239 (284)
                      ++++.     ...+++.+...   +++|
T Consensus        83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           83 SALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             ECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            99873     14455554443   4776

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=95.33  E-value=0.062  Score=45.99  Aligned_cols=73  Identities=14%  Similarity=0.181  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH---HHcCC----cEEe--eCC-CcccccCCCcccEEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL---RSLGA----DLAI--DYT-KENIEDLPEKFDVVF  219 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~---~~~g~----~~~~--~~~-~~~~~~~~~~~d~vi  219 (284)
                      .+++|||+||+|.+|...++.+... |.+|++++++.++.+.+   .++..    -.++  |-. .+.+...-+++|+||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   82 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLER-GYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVF   82 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEE
Confidence            4678999999999999998888774 99999988876643222   22211    1122  211 122333345799999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      .+++
T Consensus        83 h~A~   86 (337)
T 2c29_D           83 HVAT   86 (337)
T ss_dssp             ECCC
T ss_pred             Eecc
Confidence            9875

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=95.29  E-value=0.076  Score=43.66  Aligned_cols=94  Identities=15%  Similarity=0.173  Sum_probs=62.6

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCc---EEeeCCCcc-cccC-----
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD---LAIDYTKEN-IEDL-----  211 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~-~~~~-----  211 (284)
                      ....++++||-+|  ++.|..++.+++.+. +.+++.++.+++..+.+++    .+..   .++..+... ++..     
T Consensus        75 ~~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~  152 (247)
T 1sui_A           75 LKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEK  152 (247)
T ss_dssp             HHHTTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGG
T ss_pred             HHhhCcCEEEEeC--CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccC
Confidence            3445778999998  356778888888753 5799999999998877754    3431   122222111 1221     


Q ss_pred             -CCcccEEEeCCC--C----cHHHHHhhccCCEEEEE
Q 023273          212 -PEKFDVVFDAVG--Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       212 -~~~~d~vid~~g--~----~~~~~~~l~~~G~~v~~  241 (284)
                       .+.||+||-...  .    ++.+.++|+++|.++.-
T Consensus       153 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  189 (247)
T 1sui_A          153 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  189 (247)
T ss_dssp             GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             CCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence             357999875432  2    36788999999999864

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.29  E-value=0.017  Score=49.86  Aligned_cols=84  Identities=18%  Similarity=0.232  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~-----  224 (284)
                      .|.+|.|+| .|.+|...++.++. +|.+|++.++++++.+...+.|....      ++.+.....|+|+-+...     
T Consensus       144 ~g~tvGIIG-~G~IG~~vA~~l~~-~G~~V~~~d~~~~~~~~~~~~g~~~~------~l~ell~~aDvV~l~~P~t~~t~  215 (330)
T 4e5n_A          144 DNATVGFLG-MGAIGLAMADRLQG-WGATLQYHEAKALDTQTEQRLGLRQV------ACSELFASSDFILLALPLNADTL  215 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHTTT-SCCEEEEECSSCCCHHHHHHHTEEEC------CHHHHHHHCSEEEECCCCSTTTT
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHH-CCCEEEEECCCCCcHhHHHhcCceeC------CHHHHHhhCCEEEEcCCCCHHHH
Confidence            578999999 99999999999998 49999999988755555555553211      122223345666655431     


Q ss_pred             --c-HHHHHhhccCCEEEEE
Q 023273          225 --C-DKALKAVKEGGRVVSI  241 (284)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~  241 (284)
                        . ...+..|+++..+|.+
T Consensus       216 ~li~~~~l~~mk~gailIN~  235 (330)
T 4e5n_A          216 HLVNAELLALVRPGALLVNP  235 (330)
T ss_dssp             TCBCHHHHTTSCTTEEEEEC
T ss_pred             HHhCHHHHhhCCCCcEEEEC
Confidence              1 3455566666555555

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=95.28  E-value=0.017  Score=49.52  Aligned_cols=74  Identities=19%  Similarity=0.201  Sum_probs=47.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHH-HHHHcCCcEEeeCC--C-cccccCCC--cccEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD-LLRSLGADLAIDYT--K-ENIEDLPE--KFDVVFDAV  222 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~-~~~~~g~~~~~~~~--~-~~~~~~~~--~~d~vid~~  222 (284)
                      ..+.+|||+||+|.+|...++.+... |.+|+++++++.+.. .+..+....++..+  + +.+...-+  ++|+||+++
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   96 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQ-GHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSA   96 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGG-TCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECC
Confidence            45779999999999999999888874 899999998544321 11112111222211  1 11222233  799999998


Q ss_pred             C
Q 023273          223 G  223 (284)
Q Consensus       223 g  223 (284)
                      |
T Consensus        97 ~   97 (330)
T 2pzm_A           97 A   97 (330)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=95.26  E-value=0.022  Score=46.37  Aligned_cols=95  Identities=17%  Similarity=0.245  Sum_probs=63.1

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHc----CCc---EEeeCCCcc-cccC---C-
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL----GAD---LAIDYTKEN-IEDL---P-  212 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~-~~~~---~-  212 (284)
                      ....++++||-+| +| .|..++.+++.+. +.+++.++.+++..+.+++.    +..   .++..+... +...   . 
T Consensus        68 ~~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~  145 (232)
T 3cbg_A           68 ISLTGAKQVLEIG-VF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKP  145 (232)
T ss_dssp             HHHHTCCEEEEEC-CT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSS
T ss_pred             HHhcCCCEEEEec-CC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCC
Confidence            3445778999999 44 8888999998753 57999999999988777542    322   122222111 1111   1 


Q ss_pred             -CcccEEEeCCC-C-----cHHHHHhhccCCEEEEEc
Q 023273          213 -EKFDVVFDAVG-Q-----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       213 -~~~d~vid~~g-~-----~~~~~~~l~~~G~~v~~g  242 (284)
                       +.||+||-... .     ++.+.++|+++|.++.-.
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence             67999884332 2     377889999999998753

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.25  E-value=0.027  Score=48.27  Aligned_cols=73  Identities=25%  Similarity=0.287  Sum_probs=46.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH--HHHHHcCC---cEEeeCC--C-cccccCCC--cccEEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL--DLLRSLGA---DLAIDYT--K-ENIEDLPE--KFDVVF  219 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~--~~~~~~g~---~~~~~~~--~-~~~~~~~~--~~d~vi  219 (284)
                      .+++|||+||+|.+|...++.+... |.+|+++++++++.  +.++.++.   ...+..+  + +.+.+.-+  .+|+||
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   80 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEK-GYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVY   80 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            3678999999999999998888874 89999999876543  23344321   1122111  1 11112112  479999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +++|
T Consensus        81 h~A~   84 (345)
T 2z1m_A           81 NLAA   84 (345)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}

Probab=95.23  E-value=0.052  Score=44.83  Aligned_cols=96  Identities=18%  Similarity=0.155  Sum_probs=64.4

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      ......++.+||-+| | +.|..+..+++.  +.+++.++.+++..+.+++.....++..+...+....+.+|+|+....
T Consensus        28 ~~~~~~~~~~vLDiG-c-G~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~  103 (261)
T 3ege_A           28 NLLNLPKGSVIADIG-A-GTGGYSVALANQ--GLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILA  103 (261)
T ss_dssp             HHHCCCTTCEEEEET-C-TTSHHHHHHHTT--TCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESC
T ss_pred             HHhCCCCCCEEEEEc-C-cccHHHHHHHhC--CCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcch
Confidence            445678899999999 3 447788888873  789999999987776555433222222222222222467999987543


Q ss_pred             -----C----cHHHHHhhccCCEEEEEcCC
Q 023273          224 -----Q----CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       224 -----~----~~~~~~~l~~~G~~v~~g~~  244 (284)
                           +    ...+.+.|+ +|+++++...
T Consensus       104 l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~  132 (261)
T 3ege_A          104 IHHFSHLEKSFQEMQRIIR-DGTIVLLTFD  132 (261)
T ss_dssp             GGGCSSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred             HhhccCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence                 2    267888999 9988877543

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.22  E-value=0.021  Score=49.20  Aligned_cols=84  Identities=14%  Similarity=0.255  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~-----  224 (284)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.++++++.+.     ....+.  ..++.+..+..|+|+.+...     
T Consensus       136 ~gktvGIiG-lG~IG~~vA~~l~~~-G~~V~~~dr~~~~~~~-----~~~~~~--~~~l~ell~~aDvV~l~lPlt~~t~  206 (324)
T 3evt_A          136 TGQQLLIYG-TGQIGQSLAAKASAL-GMHVIGVNTTGHPADH-----FHETVA--FTATADALATANFIVNALPLTPTTH  206 (324)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSCCCCTT-----CSEEEE--GGGCHHHHHHCSEEEECCCCCGGGT
T ss_pred             cCCeEEEEC-cCHHHHHHHHHHHhC-CCEEEEECCCcchhHh-----Hhhccc--cCCHHHHHhhCCEEEEcCCCchHHH
Confidence            478999999 999999999999994 9999999987654321     111111  12233334578999887652     


Q ss_pred             ---cHHHHHhhccCCEEEEEc
Q 023273          225 ---CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g  242 (284)
                         ....+..|+++..+|.++
T Consensus       207 ~li~~~~l~~mk~gailIN~a  227 (324)
T 3evt_A          207 HLFSTELFQQTKQQPMLINIG  227 (324)
T ss_dssp             TCBSHHHHHTCCSCCEEEECS
T ss_pred             HhcCHHHHhcCCCCCEEEEcC
Confidence               157788899999988776

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=95.20  E-value=0.044  Score=46.55  Aligned_cols=87  Identities=31%  Similarity=0.449  Sum_probs=56.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh-hHHHH---HHcCCcEE-eeCCC-cccccCCCcccEEEeCCCC-
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLL---RSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVGQ-  224 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~~---~~~g~~~~-~~~~~-~~~~~~~~~~d~vid~~g~-  224 (284)
                      .+|+|+||+|.+|...++.+... |.+|++++++++ +...+   ...+...+ .|..+ +.+...-+++|+||.+++. 
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~   90 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKL-GHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP   90 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred             CeEEEECCCchHHHHHHHHHHHC-CCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh
Confidence            47999999999999999988884 899999999764 43333   33343322 12222 2233334679999999873 


Q ss_pred             ----cHHHHHhhccC---CEEE
Q 023273          225 ----CDKALKAVKEG---GRVV  239 (284)
Q Consensus       225 ----~~~~~~~l~~~---G~~v  239 (284)
                          ...+++.++..   +++|
T Consensus        91 ~~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           91 QILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             GSTTHHHHHHHHHHHCCCCEEE
T ss_pred             hhHHHHHHHHHHHhcCCCCEEE
Confidence                13444544433   4776

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=95.19  E-value=0.023  Score=48.70  Aligned_cols=72  Identities=18%  Similarity=0.104  Sum_probs=46.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe--eCCC-c-ccccCCCcccEEEeCCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTK-E-NIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~-~-~~~~~~~~~d~vid~~g  223 (284)
                      ++|||+|++|.+|...++.+....|.+|+++++++++.+.+.......++  |..+ . .+.+.-+++|+||.+++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~   76 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEccc
Confidence            37999999999999998887763378999999987765432221111222  2221 1 12222347999999877

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=95.19  E-value=0.035  Score=45.88  Aligned_cols=42  Identities=19%  Similarity=0.295  Sum_probs=35.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .++++||+|++|++|.+.++.+... |++|+++++++++.+.+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   45 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKA-GATVYITGRHLDTLRVV   45 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999988888874 99999999988776544

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.19  E-value=0.068  Score=44.91  Aligned_cols=66  Identities=23%  Similarity=0.279  Sum_probs=47.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~  224 (284)
                      .+|.|+| .|.+|...+..+... |.+|++.++++++.+.+++.|.... +    +..+.....|+||.|+..
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~-~----~~~~~~~~aDvvi~~vp~   67 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKA-GCSVTIWNRSPEKAEELAALGAERA-A----TPCEVVESCPVTFAMLAD   67 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSGGGGHHHHHTTCEEC-S----SHHHHHHHCSEEEECCSS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHCCCeec-C----CHHHHHhcCCEEEEEcCC
Confidence            5789999 899999988888874 8999999999999988877664321 1    111222346777776653

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.16  E-value=0.054  Score=45.39  Aligned_cols=87  Identities=29%  Similarity=0.326  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEeeCCCcccccCCCcccEEEeCCCCc--H
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVGQC--D  226 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~--~  226 (284)
                      .+.+++|+| +|.+|.+.+..+... |.+++++.+++++.+.+. +++. ...+    +..+..+.+|+|+.|+...  .
T Consensus       128 ~~~~v~iiG-aG~~g~aia~~L~~~-g~~V~v~~r~~~~~~~l~~~~g~-~~~~----~~~~~~~~aDiVi~atp~~~~~  200 (275)
T 2hk9_A          128 KEKSILVLG-AGGASRAVIYALVKE-GAKVFLWNRTKEKAIKLAQKFPL-EVVN----SPEEVIDKVQVIVNTTSVGLKD  200 (275)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSSHHHHHHHTTTSCE-EECS----CGGGTGGGCSEEEECSSTTSST
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHcCC-eeeh----hHHhhhcCCCEEEEeCCCCCCC
Confidence            578999999 799999998888875 789999999988766553 4442 1211    2333346799999998742  1


Q ss_pred             ---HH--HHhhccCCEEEEEcC
Q 023273          227 ---KA--LKAVKEGGRVVSIIG  243 (284)
Q Consensus       227 ---~~--~~~l~~~G~~v~~g~  243 (284)
                         ..  ...++++..++.++.
T Consensus       201 ~~~~~i~~~~l~~g~~viDv~~  222 (275)
T 2hk9_A          201 EDPEIFNYDLIKKDHVVVDIIY  222 (275)
T ss_dssp             TCCCSSCGGGCCTTSEEEESSS
T ss_pred             CCCCCCCHHHcCCCCEEEEcCC
Confidence               11  345667776666654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.15  E-value=0.052  Score=45.01  Aligned_cols=73  Identities=16%  Similarity=0.231  Sum_probs=46.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEe-CChhhHHHH----HHcCCc-EEeeCCCcc---cccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLL----RSLGAD-LAIDYTKEN---IEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~-~~~~~~~~~----~~~g~~-~~~~~~~~~---~~~~-------~~  213 (284)
                      .+++++|+|++|++|.+.++..... |++|++.. +++++.+..    ++.+.. .++..+-.+   ....       .+
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAAD-GFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4679999999999999988888774 99997765 455444332    233322 222221111   1111       24


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      .+|++|+++|
T Consensus       104 ~id~li~nAg  113 (267)
T 4iiu_A          104 AWYGVVSNAG  113 (267)
T ss_dssp             CCSEEEECCC
T ss_pred             CccEEEECCC
Confidence            7999999987

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=95.14  E-value=0.042  Score=46.29  Aligned_cols=87  Identities=25%  Similarity=0.405  Sum_probs=55.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh------hhHHHHH---HcCCcEEe--eCCC-cccccCCCcccEE
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST------AKLDLLR---SLGADLAI--DYTK-ENIEDLPEKFDVV  218 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~------~~~~~~~---~~g~~~~~--~~~~-~~~~~~~~~~d~v  218 (284)
                      ..+|+|+||+|.+|...++.+... |.+|++++++.      ++.+.++   ..+.. ++  |..+ +.+.+.-+++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d~~~l~~~~~~~d~v   81 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDL-GHPTFLLVRESTASSNSEKAQLLESFKASGAN-IVHGSIDDHASLVEAVKNVDVV   81 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCE-EECCCTTCHHHHHHHHHTCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhC-CCCEEEEECCcccccCHHHHHHHHHHHhCCCE-EEEeccCCHHHHHHHHcCCCEE
Confidence            467999999999999999988884 89999999863      3333333   23332 22  2221 1222334579999


Q ss_pred             EeCCCCc-----HHHHHhhccC---CEEE
Q 023273          219 FDAVGQC-----DKALKAVKEG---GRVV  239 (284)
Q Consensus       219 id~~g~~-----~~~~~~l~~~---G~~v  239 (284)
                      |.+++..     ..+++.++..   ++++
T Consensus        82 i~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           82 ISTVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             EECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             EECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence            9998731     3444444432   4776

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=95.13  E-value=0.077  Score=43.06  Aligned_cols=91  Identities=11%  Similarity=0.088  Sum_probs=62.0

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccc-cc-CCCcccEEEeCCC
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI-ED-LPEKFDVVFDAVG  223 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~-~~~~~d~vid~~g  223 (284)
                      ..++++.+||-+|+  +.|..+..+++.  +.+++.++.+++..+.+++.  ...+..+.... .. ..+.+|+|+....
T Consensus        37 ~~~~~~~~vLDiGc--G~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~  110 (240)
T 3dli_A           37 PYFKGCRRVLDIGC--GRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHF  110 (240)
T ss_dssp             GGTTTCSCEEEETC--TTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESC
T ss_pred             hhhcCCCeEEEEeC--CCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCc
Confidence            34678899999993  356666667665  78999999999998888775  22332221111 11 2467999986432


Q ss_pred             -----C------cHHHHHhhccCCEEEEEc
Q 023273          224 -----Q------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       224 -----~------~~~~~~~l~~~G~~v~~g  242 (284)
                           .      +..+.+.|+++|++++..
T Consensus       111 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  140 (240)
T 3dli_A          111 VEHLDPERLFELLSLCYSKMKYSSYIVIES  140 (240)
T ss_dssp             GGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred             hhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence                 1      257888999999998764

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.13  E-value=0.047  Score=49.44  Aligned_cols=92  Identities=23%  Similarity=0.274  Sum_probs=59.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc-CCcE-EeeCCC-cccccCCCcccEEEeCCCCc-
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-GADL-AIDYTK-ENIEDLPEKFDVVFDAVGQC-  225 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~-g~~~-~~~~~~-~~~~~~~~~~d~vid~~g~~-  225 (284)
                      .+.+|+|+| +|.+|.+++..+...++.+|++++++.++.+.+.+. +... .++..+ +.+...-+++|+||+|++.. 
T Consensus        22 ~~k~VlIiG-AGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~  100 (467)
T 2axq_A           22 MGKNVLLLG-SGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTF  100 (467)
T ss_dssp             -CEEEEEEC-CSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGG
T ss_pred             CCCEEEEEC-ChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhh
Confidence            456899999 599999988877764467899999998887766532 3221 122221 12222235799999999852 


Q ss_pred             --HHHHHhhccCCEEEEEc
Q 023273          226 --DKALKAVKEGGRVVSII  242 (284)
Q Consensus       226 --~~~~~~l~~~G~~v~~g  242 (284)
                        ..+..+++++-.++...
T Consensus       101 ~~~v~~a~l~~g~~vvd~~  119 (467)
T 2axq_A          101 HPNVVKSAIRTKTDVVTSS  119 (467)
T ss_dssp             HHHHHHHHHHHTCEEEECS
T ss_pred             hHHHHHHHHhcCCEEEEee
Confidence              33455677766666553

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=95.13  E-value=0.044  Score=45.33  Aligned_cols=39  Identities=26%  Similarity=0.382  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          149 SAGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       149 ~~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      -.+++++|+|++  +++|.+.++.+... |++|+++.++.++
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~-G~~v~~~~~~~~~   58 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEM-GAAVAITYASRAQ   58 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHT-SCEEEECBSSSSS
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHC-CCeEEEEeCCcch
Confidence            357899999998  89999988887774 9999998876443

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=95.12  E-value=0.024  Score=44.87  Aligned_cols=68  Identities=24%  Similarity=0.357  Sum_probs=45.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEeeCCCc---ccccC-C--CcccEEEeCCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKE---NIEDL-P--EKFDVVFDAVG  223 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~---~~~~~-~--~~~d~vid~~g  223 (284)
                      ++++|+|++|++|...++.+..  . +|+++++++++.+.+. +++. ..+..+-.   .+... .  +++|++|+++|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~--~-~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   75 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKG--H-DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVG   75 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTT--S-EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHh--C-CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            4789999999999998887766  3 8999999888776554 2332 23222111   11111 1  37999999987

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=95.10  E-value=0.016  Score=50.81  Aligned_cols=72  Identities=19%  Similarity=0.173  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe--eCCC-cccccCCCcccEEEeCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTK-ENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~-~~~~~~~~~~d~vid~~g  223 (284)
                      ...+|||+|++|.+|...++.+... |.+|+++++++++.......+. .++  |..+ +.+...-+++|+||.+++
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~v-~~~~~Dl~d~~~~~~~~~~~d~Vih~A~  102 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHE-GHYVIASDWKKNEHMTEDMFCD-EFHLVDLRVMENCLKVTEGVDHVFNLAA  102 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCSSSCGGGTCS-EEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHC-CCeEEEEECCCccchhhccCCc-eEEECCCCCHHHHHHHhCCCCEEEECce
Confidence            3578999999999999999888874 8999999987654322111122 222  2211 122233458999999987

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.10  E-value=0.18  Score=42.23  Aligned_cols=94  Identities=19%  Similarity=0.140  Sum_probs=63.2

Q ss_pred             ccchHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc
Q 023273          132 LPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED  210 (284)
Q Consensus       132 ~~~~~~ta~~al~~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  210 (284)
                      +||........++..+ .-.|.+++|+|.++.+|..++.++... +++|.++.+....                   +.+
T Consensus       141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-gAtVtv~hs~T~~-------------------L~~  200 (286)
T 4a5o_A          141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-GCTVTVTHRFTRD-------------------LAD  200 (286)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-TCEEEEECTTCSC-------------------HHH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCCCcC-------------------HHH
Confidence            3544444444444443 358999999997777999999999985 9998887653322                   222


Q ss_pred             CCCcccEEEeCCCCcH-HHHHhhccCCEEEEEcCCC
Q 023273          211 LPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       211 ~~~~~d~vid~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (284)
                      ..+..|++|.++|.++ ---+.++++..++.+|...
T Consensus       201 ~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~  236 (286)
T 4a5o_A          201 HVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINR  236 (286)
T ss_dssp             HHHTCSEEEECCCCTTCBCGGGSCTTCEEEECCSCS
T ss_pred             HhccCCEEEECCCCCCCCCHHHcCCCeEEEEecccc
Confidence            2356899999988641 1225678888888887654

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.09  E-value=0.084  Score=44.61  Aligned_cols=94  Identities=22%  Similarity=0.235  Sum_probs=62.8

Q ss_pred             ccchHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc
Q 023273          132 LPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED  210 (284)
Q Consensus       132 ~~~~~~ta~~al~~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  210 (284)
                      +||+.......++..+ --.|.+++|+|++..+|.-++.++... +++|.++.+..+                   ++.+
T Consensus       145 ~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~hs~t~-------------------~L~~  204 (301)
T 1a4i_A          145 IPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-NATVTTCHSKTA-------------------HLDE  204 (301)
T ss_dssp             CCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTCS-------------------SHHH
T ss_pred             cCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-CCeEEEEECCcc-------------------cHHH
Confidence            3444333333344433 357999999996557899999999985 899888764322                   2233


Q ss_pred             CCCcccEEEeCCCCcH-HHHHhhccCCEEEEEcCCC
Q 023273          211 LPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       211 ~~~~~d~vid~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (284)
                      ..+..|++|.++|.++ ---++++++..++.+|.+.
T Consensus       205 ~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~~  240 (301)
T 1a4i_A          205 EVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINY  240 (301)
T ss_dssp             HHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCBC
T ss_pred             HhccCCEEEECCCCcccCCHHHcCCCcEEEEccCCC
Confidence            3467899999998642 2224578888888888653

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=95.07  E-value=0.033  Score=52.32  Aligned_cols=73  Identities=23%  Similarity=0.377  Sum_probs=43.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---------ChhhHHHH----HHcCCcEEeeCCCc-cccc----C
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---------STAKLDLL----RSLGADLAIDYTKE-NIED----L  211 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---------~~~~~~~~----~~~g~~~~~~~~~~-~~~~----~  211 (284)
                      .|+++||+||++++|.+.++.+... |++|+++++         +.++.+.+    ++.+.....|..+. ...+    .
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~-Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~   96 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAER-GAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETA   96 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC--
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHH
Confidence            5789999999999999988887774 999999876         44444332    34454444443321 1111    1


Q ss_pred             ---CCcccEEEeCCC
Q 023273          212 ---PEKFDVVFDAVG  223 (284)
Q Consensus       212 ---~~~~d~vid~~g  223 (284)
                         .+.+|++|+++|
T Consensus        97 ~~~~g~iDiLVnnAG  111 (613)
T 3oml_A           97 IKAFGRVDILVNNAG  111 (613)
T ss_dssp             --------CEECCCC
T ss_pred             HHHCCCCcEEEECCC
Confidence               247999999988

>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}

Probab=95.07  E-value=0.083  Score=43.97  Aligned_cols=93  Identities=23%  Similarity=0.268  Sum_probs=63.5

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC-CcEEeeCCCcccccCCCcccEEEeCCC
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG-ADLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      .....++.+||-+|+  +.|..+..+++ . +.+++.++.+++.++.+++.. ...++..+...+. ..+.+|+|+....
T Consensus        52 ~l~~~~~~~vLDiGc--G~G~~~~~l~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~  126 (279)
T 3ccf_A           52 LLNPQPGEFILDLGC--GTGQLTEKIAQ-S-GAEVLGTDNAATMIEKARQNYPHLHFDVADARNFR-VDKPLDAVFSNAM  126 (279)
T ss_dssp             HHCCCTTCEEEEETC--TTSHHHHHHHH-T-TCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCC-CSSCEEEEEEESC
T ss_pred             HhCCCCCCEEEEecC--CCCHHHHHHHh-C-CCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCC-cCCCcCEEEEcch
Confidence            345678899999983  35777777777 3 789999999999888887542 1122222222222 2467999987543


Q ss_pred             -----C----cHHHHHhhccCCEEEEEc
Q 023273          224 -----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       224 -----~----~~~~~~~l~~~G~~v~~g  242 (284)
                           +    +..+.+.|+++|++++..
T Consensus       127 l~~~~d~~~~l~~~~~~LkpgG~l~~~~  154 (279)
T 3ccf_A          127 LHWVKEPEAAIASIHQALKSGGRFVAEF  154 (279)
T ss_dssp             GGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hhhCcCHHHHHHHHHHhcCCCcEEEEEe
Confidence                 2    267888999999998753

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.05  E-value=0.14  Score=42.85  Aligned_cols=93  Identities=22%  Similarity=0.226  Sum_probs=60.8

Q ss_pred             ccchHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc
Q 023273          132 LPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED  210 (284)
Q Consensus       132 ~~~~~~ta~~al~~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  210 (284)
                      +||........++..+ .-.|.+++|+|.++.+|..++.++... +++|.++.+..+.                   +.+
T Consensus       140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-gAtVtv~h~~t~~-------------------L~~  199 (285)
T 3p2o_A          140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-GATVSVCHIKTKD-------------------LSL  199 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTCSC-------------------HHH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCchh-------------------HHH
Confidence            3444333333444433 358999999997677899999999985 9998887654322                   222


Q ss_pred             CCCcccEEEeCCCCcH-HHHHhhccCCEEEEEcCC
Q 023273          211 LPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       211 ~~~~~d~vid~~g~~~-~~~~~l~~~G~~v~~g~~  244 (284)
                      ..+..|++|.++|.++ ---+.++++..++.+|..
T Consensus       200 ~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~  234 (285)
T 3p2o_A          200 YTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGIN  234 (285)
T ss_dssp             HHTTCSEEEECSSCTTCBCGGGSCTTEEEEECCCE
T ss_pred             HhhcCCEEEECCCCCCcCCHHHcCCCeEEEEeccC
Confidence            2356888998888531 122456777777777654

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.04  E-value=0.14  Score=42.81  Aligned_cols=88  Identities=13%  Similarity=0.196  Sum_probs=59.1

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHH-HHcCCcEEeeCCCcccccCCCcccEEEeCCCC
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~  224 (284)
                      +...+.+++|+| +|+.|.+++..+... |+ +++++.++.+|.+.+ ++++..  +..   ...  ...+|+||+|+..
T Consensus       115 ~~~~~~~vlvlG-aGgaarav~~~L~~~-G~~~i~v~nRt~~ka~~la~~~~~~--~~~---~~~--~~~~DivInaTp~  185 (271)
T 1npy_A          115 HLNKNAKVIVHG-SGGMAKAVVAAFKNS-GFEKLKIYARNVKTGQYLAALYGYA--YIN---SLE--NQQADILVNVTSI  185 (271)
T ss_dssp             TCCTTSCEEEEC-SSTTHHHHHHHHHHT-TCCCEEEECSCHHHHHHHHHHHTCE--EES---CCT--TCCCSEEEECSST
T ss_pred             CCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHcCCc--cch---hhh--cccCCEEEECCCC
Confidence            344678999999 899999988888775 75 799999998876544 455541  111   111  2579999999863


Q ss_pred             c---H-------HHHHhhccCCEEEEEcC
Q 023273          225 C---D-------KALKAVKEGGRVVSIIG  243 (284)
Q Consensus       225 ~---~-------~~~~~l~~~G~~v~~g~  243 (284)
                      .   .       ....+++++..++.+..
T Consensus       186 gm~~~~~~~~~~~~~~~l~~~~~v~DlvY  214 (271)
T 1npy_A          186 GMKGGKEEMDLAFPKAFIDNASVAFDVVA  214 (271)
T ss_dssp             TCTTSTTTTSCSSCHHHHHHCSEEEECCC
T ss_pred             CccCccccCCCCCCHHHcCCCCEEEEeec
Confidence            1   1       12356777776766654

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=95.03  E-value=0.12  Score=45.96  Aligned_cols=99  Identities=18%  Similarity=0.216  Sum_probs=63.1

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHH-----------cCC--cE--EeeCCC
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRS-----------LGA--DL--AIDYTK  205 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~-----------~g~--~~--~~~~~~  205 (284)
                      .+...+++++++|+-+|  +++|..++++|+.. ++. ++.++.+++-.+.+++           +|.  ..  ++..+-
T Consensus       165 il~~l~l~~gd~VLDLG--CGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~  241 (438)
T 3uwp_A          165 MIDEIKMTDDDLFVDLG--SGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF  241 (438)
T ss_dssp             HHHHHCCCTTCEEEEES--CTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCT
T ss_pred             HHHhcCCCCCCEEEEeC--CCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcc
Confidence            34667899999999998  35688888888874 765 9999999865544432           232  22  222221


Q ss_pred             cc--cccCCCcccEEEeCCC----C----cHHHHHhhccCCEEEEEcC
Q 023273          206 EN--IEDLPEKFDVVFDAVG----Q----CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       206 ~~--~~~~~~~~d~vid~~g----~----~~~~~~~l~~~G~~v~~g~  243 (284)
                      ..  +...-..+|+|+.+.-    .    +..+++.|+++|++|.+..
T Consensus       242 ~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~  289 (438)
T 3uwp_A          242 LSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKP  289 (438)
T ss_dssp             TSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred             cCCccccccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeec
Confidence            11  1110136899885321    1    2567789999999998743

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.02  E-value=0.095  Score=44.84  Aligned_cols=68  Identities=19%  Similarity=0.284  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~  224 (284)
                      ...+|.|+| .|.+|...+..+... |.+|++.++++++.+.+.+.|.... .    +..+.....|+||-|+..
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~l~~~g~~~~-~----~~~e~~~~aDvVi~~vp~   97 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCEA-GYALQVWNRTPARAASLAALGATIH-E----QARAAARDADIVVSMLEN   97 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTTTCEEE-S----SHHHHHTTCSEEEECCSS
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhC-CCeEEEEcCCHHHHHHHHHCCCEee-C----CHHHHHhcCCEEEEECCC
Confidence            346899999 899999988888774 8999999999999988877664321 1    112223457777777764

>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}

Probab=95.02  E-value=0.073  Score=42.00  Aligned_cols=93  Identities=15%  Similarity=0.083  Sum_probs=58.7

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CC-cEEeeCCCcccccCCCcccEEEeC
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA-DLAIDYTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~-~~~~~~~~~~~~~~~~~~d~vid~  221 (284)
                      ...++.+||-+| +| .|.....++.. .+.+++.++.+++..+.+++.    +. ..++..+........+.+|+|+..
T Consensus        20 ~~~~~~~vLDiG-cG-~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~   96 (209)
T 2p8j_A           20 ESNLDKTVLDCG-AG-GDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSY   96 (209)
T ss_dssp             HSSSCSEEEEES-CC-SSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEEC
T ss_pred             ccCCCCEEEEEC-CC-CCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEc
Confidence            456789999999 44 45443444444 388999999999888777542    21 122222222222223579999864


Q ss_pred             CC--C---------cHHHHHhhccCCEEEEEc
Q 023273          222 VG--Q---------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       222 ~g--~---------~~~~~~~l~~~G~~v~~g  242 (284)
                      ..  .         ...+.+.|+++|++++..
T Consensus        97 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  128 (209)
T 2p8j_A           97 GTIFHMRKNDVKEAIDEIKRVLKPGGLACINF  128 (209)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            22  1         156788999999998764

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.02  E-value=0.21  Score=42.19  Aligned_cols=95  Identities=29%  Similarity=0.298  Sum_probs=61.1

Q ss_pred             ccchHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc
Q 023273          132 LPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED  210 (284)
Q Consensus       132 ~~~~~~ta~~al~~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  210 (284)
                      +||....+...++..+ .-.|.+++|+|.++.+|..++.++... |++|+++.+....+++                 .+
T Consensus       145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~~~~T~~l~l-----------------~~  206 (300)
T 4a26_A          145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-NATVTIVHSGTSTEDM-----------------ID  206 (300)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTSCHHHH-----------------HH
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCCCCchh-----------------hh
Confidence            3444433444444333 458999999997667899999999985 9999888764333320                 01


Q ss_pred             CCCcccEEEeCCCCcH-HHHHhhccCCEEEEEcCC
Q 023273          211 LPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       211 ~~~~~d~vid~~g~~~-~~~~~l~~~G~~v~~g~~  244 (284)
                      ..+..|++|.++|.++ ---+.++++..++.+|..
T Consensus       207 ~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~  241 (300)
T 4a26_A          207 YLRTADIVIAAMGQPGYVKGEWIKEGAAVVDVGTT  241 (300)
T ss_dssp             HHHTCSEEEECSCCTTCBCGGGSCTTCEEEECCCE
T ss_pred             hhccCCEEEECCCCCCCCcHHhcCCCcEEEEEecc
Confidence            1245788888888531 112456778777777653

>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A

Probab=95.01  E-value=0.13  Score=45.86  Aligned_cols=97  Identities=21%  Similarity=0.189  Sum_probs=63.6

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-EEeeCCCccccc-C-CCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIED-L-PEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~-~-~~~~d  216 (284)
                      .....+++++||-.| +|+ |..+..++....+.++++++.++++.+.+++    .|.. .++..+...... . .+.||
T Consensus       240 ~~l~~~~g~~VLDlg-aG~-G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD  317 (429)
T 1sqg_A          240 TWLAPQNGEHILDLC-AAP-GGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFD  317 (429)
T ss_dssp             HHHCCCTTCEEEEES-CTT-CHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEE
T ss_pred             HHcCCCCcCeEEEEC-CCc-hHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCC
Confidence            345678999999998 444 6677778777434799999999998887754    3432 333333222221 1 25699


Q ss_pred             EEEe---CCCC----------------------------cHHHHHhhccCCEEEEEc
Q 023273          217 VVFD---AVGQ----------------------------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       217 ~vid---~~g~----------------------------~~~~~~~l~~~G~~v~~g  242 (284)
                      .|+-   |+|.                            ...++++|+++|+++...
T Consensus       318 ~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst  374 (429)
T 1sqg_A          318 RILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT  374 (429)
T ss_dssp             EEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             EEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence            9875   4441                            135777899999998654

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=95.00  E-value=0.02  Score=49.25  Aligned_cols=35  Identities=11%  Similarity=0.177  Sum_probs=29.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      +++++|+|++|++|.+.+..+... |++++++.++.
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~-G~~v~~v~r~~   36 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASD-PSQSFKVYATL   36 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTC-TTCCEEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC-CCceEEEEeec
Confidence            578999999999999988888874 88888776543

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=95.00  E-value=0.058  Score=45.70  Aligned_cols=72  Identities=18%  Similarity=0.238  Sum_probs=44.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-Chhh---HHHHHHcCC----cEEe--eCC-CcccccCCCcccEEE
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAK---LDLLRSLGA----DLAI--DYT-KENIEDLPEKFDVVF  219 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~---~~~~~~~g~----~~~~--~~~-~~~~~~~~~~~d~vi  219 (284)
                      |++|||+||+|.+|...++.+... |.+|+++++ ++++   ...+.++..    ..++  |-. .+.+...-+++|+||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   79 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLEN-GYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF   79 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHC-CCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence            578999999999999999888774 899998887 5432   222222210    0122  211 122333345789999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      ++++
T Consensus        80 h~A~   83 (322)
T 2p4h_X           80 HTAS   83 (322)
T ss_dssp             ECCC
T ss_pred             EcCC
Confidence            9875

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=94.98  E-value=0.031  Score=48.32  Aligned_cols=73  Identities=15%  Similarity=0.179  Sum_probs=47.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHc--C-CcEEeeCC--C-cccccCCC--cccEEEe
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSL--G-ADLAIDYT--K-ENIEDLPE--KFDVVFD  220 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~--g-~~~~~~~~--~-~~~~~~~~--~~d~vid  220 (284)
                      .+++|||+|++|.+|...++.+... |.+|+++++++++...+ +.+  + ...++..+  + +.+...-+  .+|+||.
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   86 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTM-GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   86 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhC-CCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence            4679999999999999999888874 89999999876554322 221  1 11222221  1 11222222  4899999


Q ss_pred             CCC
Q 023273          221 AVG  223 (284)
Q Consensus       221 ~~g  223 (284)
                      +++
T Consensus        87 ~A~   89 (357)
T 1rkx_A           87 MAA   89 (357)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            987

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=94.96  E-value=0.059  Score=47.94  Aligned_cols=39  Identities=13%  Similarity=0.189  Sum_probs=33.2

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      ..++.+|||+||+|.+|...+..+.. .|.+|++++++++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~-~g~~V~~~~R~~~  104 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQG-YSHRIYCFIRADN  104 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTT-TEEEEEEEEECSS
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHc-CCCEEEEEECCCC
Confidence            34567999999999999998888866 4899999999776

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=94.95  E-value=0.081  Score=45.57  Aligned_cols=73  Identities=18%  Similarity=0.194  Sum_probs=47.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh----hHHHHH-Hc-----CCcEEeeCC--C-cccccCCCccc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA----KLDLLR-SL-----GADLAIDYT--K-ENIEDLPEKFD  216 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~----~~~~~~-~~-----g~~~~~~~~--~-~~~~~~~~~~d  216 (284)
                      .+.+|||+|++|.+|...++.+... |.+|+++++++.    +.+.+. .+     ....++.-+  + +.+.+.-+++|
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKL-DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            4578999999999999999888874 899999998653    233222 11     111222221  1 12223335899


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      +||.+++
T Consensus       105 ~vih~A~  111 (352)
T 1sb8_A          105 YVLHQAA  111 (352)
T ss_dssp             EEEECCS
T ss_pred             EEEECCc
Confidence            9999987

>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}

Probab=94.93  E-value=0.12  Score=41.63  Aligned_cols=92  Identities=21%  Similarity=0.230  Sum_probs=63.3

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC----cEEeeCCCcccccCCCcccEEEeCCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA----DLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      ..++.+||-+|+  +.|..+..+++...+.+++.++.+++..+.+++.-.    ..++..+...... .+.+|+|+....
T Consensus        42 ~~~~~~vLDiG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~  118 (234)
T 3dtn_A           42 DTENPDILDLGA--GTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDF-EEKYDMVVSALS  118 (234)
T ss_dssp             SCSSCEEEEETC--TTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCC-CSCEEEEEEESC
T ss_pred             CCCCCeEEEecC--CCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCC-CCCceEEEEeCc
Confidence            678899999983  457778888887447899999999998888875421    1223222222222 267999987532


Q ss_pred             ----C-------cHHHHHhhccCCEEEEEc
Q 023273          224 ----Q-------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       224 ----~-------~~~~~~~l~~~G~~v~~g  242 (284)
                          .       +..+.+.|+++|++++..
T Consensus       119 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  148 (234)
T 3dtn_A          119 IHHLEDEDKKELYKRSYSILKESGIFINAD  148 (234)
T ss_dssp             GGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence                1       256778999999999765

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=94.92  E-value=0.35  Score=36.18  Aligned_cols=89  Identities=11%  Similarity=0.087  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC-hhhHHHHHH---cCCcEEeeCCC---cccccC-CCcccEEEeC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-TAKLDLLRS---LGADLAIDYTK---ENIEDL-PEKFDVVFDA  221 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~-~~~~~~~~~---~g~~~~~~~~~---~~~~~~-~~~~d~vid~  221 (284)
                      ..++++|+| .|.+|...++.+... |.+|++++++ +++.+.+++   .+.. ++.-+.   +.+.+. -+++|+++-+
T Consensus         2 ~~~~vlI~G-~G~vG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (153)
T 1id1_A            2 RKDHFIVCG-HSILAINTILQLNQR-GQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSNDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             CCSCEEEEC-CSHHHHHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHC-CCCEEEEECCChHHHHHHHHhhcCCCe-EEEcCCCCHHHHHHcChhhCCEEEEe
Confidence            456899999 799999999988884 8999999997 465555542   2333 332221   112222 4689999999


Q ss_pred             CCCc------HHHHHhhccCCEEEEE
Q 023273          222 VGQC------DKALKAVKEGGRVVSI  241 (284)
Q Consensus       222 ~g~~------~~~~~~l~~~G~~v~~  241 (284)
                      +++.      ....+.+.+..+++..
T Consensus        79 ~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           79 SDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             cCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            9863      2344455455566654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=94.90  E-value=0.076  Score=45.39  Aligned_cols=72  Identities=24%  Similarity=0.290  Sum_probs=46.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH---HHHHHc---CCcEEe--eCC-CcccccCCCcccEEEeC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL---DLLRSL---GADLAI--DYT-KENIEDLPEKFDVVFDA  221 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~---~~~~~~---g~~~~~--~~~-~~~~~~~~~~~d~vid~  221 (284)
                      +++|||+||+|.+|...++.+... |.+|++++++.++.   ..+..+   ....++  |-. .+.+...-+++|+||.+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   87 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQK-GYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHV   87 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHT-TCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHC-CCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence            689999999999999998888874 99999888865532   222222   111222  211 12233333579999987


Q ss_pred             CC
Q 023273          222 VG  223 (284)
Q Consensus       222 ~g  223 (284)
                      ++
T Consensus        88 A~   89 (338)
T 2rh8_A           88 AT   89 (338)
T ss_dssp             SS
T ss_pred             CC
Confidence            65

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=94.90  E-value=0.052  Score=46.39  Aligned_cols=92  Identities=15%  Similarity=0.176  Sum_probs=55.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCC---hhhHHHHH-Hc----CCc-EEeeCCCc-ccccCCCcccE
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSS---TAKLDLLR-SL----GAD-LAIDYTKE-NIEDLPEKFDV  217 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~---~~~~~~~~-~~----g~~-~~~~~~~~-~~~~~~~~~d~  217 (284)
                      -.+++++|+| +|+.|.+++..+... |+ +++++.++   .+|.+.+. ++    +.. ..++..+. ...+....+|+
T Consensus       146 l~gk~~lVlG-AGGaaraia~~L~~~-G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~Di  223 (312)
T 3t4e_A          146 MRGKTMVLLG-AGGAATAIGAQAAIE-GIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADI  223 (312)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred             cCCCEEEEEC-cCHHHHHHHHHHHHc-CCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceE
Confidence            3578999999 699999988888875 76 79999998   55554432 22    211 12222211 01122346999


Q ss_pred             EEeCCCC---c--HH----HHHhhccCCEEEEEc
Q 023273          218 VFDAVGQ---C--DK----ALKAVKEGGRVVSII  242 (284)
Q Consensus       218 vid~~g~---~--~~----~~~~l~~~G~~v~~g  242 (284)
                      +|+|+..   +  ..    -...++++..++.+-
T Consensus       224 IINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v  257 (312)
T 3t4e_A          224 LTNGTKVGMKPLENESLIGDVSLLRPELLVTECV  257 (312)
T ss_dssp             EEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECC
T ss_pred             EEECCcCCCCCCCCCcccCCHHHcCCCCEEEEec
Confidence            9999763   1  11    135566666655554

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=94.90  E-value=0.058  Score=49.58  Aligned_cols=70  Identities=29%  Similarity=0.448  Sum_probs=45.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcEEeeCCCcccccC-CCcccEEEeCCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDL-PEKFDVVFDAVGQ  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~-~~~~d~vid~~g~  224 (284)
                      .+.+++|+|+ |++|.+++..+... |++|+++.++.++.+.+ ++++.. ++...  ++... ...+|++++++|.
T Consensus       363 ~~k~vlV~Ga-GGig~aia~~L~~~-G~~V~i~~R~~~~a~~la~~~~~~-~~~~~--dl~~~~~~~~DilVN~agv  434 (523)
T 2o7s_A          363 ASKTVVVIGA-GGAGKALAYGAKEK-GAKVVIANRTYERALELAEAIGGK-ALSLT--DLDNYHPEDGMVLANTTSM  434 (523)
T ss_dssp             ---CEEEECC-SHHHHHHHHHHHHH-CC-CEEEESSHHHHHHHHHHTTC--CEETT--TTTTC--CCSEEEEECSST
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCc-eeeHH--HhhhccccCceEEEECCCC
Confidence            4678999995 89999988888875 88999999988877655 345432 22222  12221 2358999999873

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=94.89  E-value=0.29  Score=37.69  Aligned_cols=96  Identities=18%  Similarity=0.223  Sum_probs=64.0

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CC----cEEeeCCCcccccCCCc
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA----DLAIDYTKENIEDLPEK  214 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~----~~~~~~~~~~~~~~~~~  214 (284)
                      +.....+++++||-+| +| .|..+..+++.  +.+++.++.+++..+.+++.    +.    ..++..+..... ..+.
T Consensus        45 ~~~~~~~~~~~vLdiG-~G-~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~  119 (194)
T 1dus_A           45 VENVVVDKDDDILDLG-CG-YGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV-KDRK  119 (194)
T ss_dssp             HHHCCCCTTCEEEEET-CT-TSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC-TTSC
T ss_pred             HHHcccCCCCeEEEeC-CC-CCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc-ccCC
Confidence            3455667899999998 44 57777777775  78999999999888777542    32    223332211111 1457


Q ss_pred             ccEEEeCCC--C--------cHHHHHhhccCCEEEEEcC
Q 023273          215 FDVVFDAVG--Q--------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       215 ~d~vid~~g--~--------~~~~~~~l~~~G~~v~~g~  243 (284)
                      +|+|+....  .        ...+.+.|+++|++++...
T Consensus       120 ~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  158 (194)
T 1dus_A          120 YNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ  158 (194)
T ss_dssp             EEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence            999987543  1        2567788999999987753

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=94.88  E-value=0.23  Score=39.67  Aligned_cols=69  Identities=14%  Similarity=0.097  Sum_probs=50.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEeeCCCc---ccccC-CCcccEEEeCCCC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKE---NIEDL-PEKFDVVFDAVGQ  224 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~---~~~~~-~~~~d~vid~~g~  224 (284)
                      +|+|+| .|.+|...++.+... |.+++++++++++.+.+. ..+.. ++.-+..   .+.+. -+++|+++-++++
T Consensus         2 ~iiIiG-~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~l~~~~~~~-~i~gd~~~~~~l~~a~i~~ad~vi~~~~~   75 (218)
T 3l4b_C            2 KVIIIG-GETTAYYLARSMLSR-KYGVVIINKDRELCEEFAKKLKAT-IIHGDGSHKEILRDAEVSKNDVVVILTPR   75 (218)
T ss_dssp             CEEEEC-CHHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHHSSSE-EEESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred             EEEEEC-CCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHcCCe-EEEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence            689999 799999999988884 999999999999988765 45543 3322211   12222 4679999999986

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=94.86  E-value=0.062  Score=46.60  Aligned_cols=84  Identities=20%  Similarity=0.323  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~-----  224 (284)
                      .|++|.|+| .|.+|...++.++. +|.+|++.+++..+.+...  +... .    +++.+..+..|+|+-++..     
T Consensus       172 ~gktvGIIG-lG~IG~~vA~~l~~-~G~~V~~~dr~~~~~~~~~--g~~~-~----~~l~ell~~sDvV~l~~Plt~~T~  242 (345)
T 4g2n_A          172 TGRRLGIFG-MGRIGRAIATRARG-FGLAIHYHNRTRLSHALEE--GAIY-H----DTLDSLLGASDIFLIAAPGRPELK  242 (345)
T ss_dssp             TTCEEEEES-CSHHHHHHHHHHHT-TTCEEEEECSSCCCHHHHT--TCEE-C----SSHHHHHHTCSEEEECSCCCGGGT
T ss_pred             CCCEEEEEE-eChhHHHHHHHHHH-CCCEEEEECCCCcchhhhc--CCeE-e----CCHHHHHhhCCEEEEecCCCHHHH
Confidence            478999999 99999999999998 4999999998764433222  3221 1    1223333456777666541     


Q ss_pred             --c-HHHHHhhccCCEEEEEc
Q 023273          225 --C-DKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g  242 (284)
                        . ...+..|+++..+|.++
T Consensus       243 ~li~~~~l~~mk~gailIN~a  263 (345)
T 4g2n_A          243 GFLDHDRIAKIPEGAVVINIS  263 (345)
T ss_dssp             TCBCHHHHHHSCTTEEEEECS
T ss_pred             HHhCHHHHhhCCCCcEEEECC
Confidence              1 45666677766666653

>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53

Probab=94.86  E-value=0.34  Score=38.41  Aligned_cols=92  Identities=14%  Similarity=0.176  Sum_probs=61.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC--cEEeeCCCccccc-C-CCcccEEEe
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA--DLAIDYTKENIED-L-PEKFDVVFD  220 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~--~~~~~~~~~~~~~-~-~~~~d~vid  220 (284)
                      .++++||-+|+  +.|..++.+++...+.+++.++.+++..+.+++    .+.  ..++..+...+.. . .+.+|+|+-
T Consensus        40 ~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~  117 (214)
T 1yzh_A           40 NDNPIHVEVGS--GKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYL  117 (214)
T ss_dssp             SCCCEEEEESC--TTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred             CCCCeEEEEcc--CcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEE
Confidence            46788999983  467778888887446799999999998877753    232  2233333333332 2 346998876


Q ss_pred             CCCC-----------------cHHHHHhhccCCEEEEEc
Q 023273          221 AVGQ-----------------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       221 ~~g~-----------------~~~~~~~l~~~G~~v~~g  242 (284)
                      ....                 ...+.+.|+++|.+++..
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  156 (214)
T 1yzh_A          118 NFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT  156 (214)
T ss_dssp             ESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred             ECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence            5442                 245678899999998653

>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42

Probab=94.85  E-value=0.052  Score=44.13  Aligned_cols=92  Identities=12%  Similarity=0.104  Sum_probs=61.1

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc------EEeeCCCcccccCCCcccEEEeC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD------LAIDYTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~d~vid~  221 (284)
                      ..++.+||-+|+  +.|..+..+++. +..+++.++.+++..+.+++....      .++..+...+....+.+|+|+..
T Consensus        77 ~~~~~~vLDiGc--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~  153 (241)
T 2ex4_A           77 KTGTSCALDCGA--GIGRITKRLLLP-LFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQ  153 (241)
T ss_dssp             CCCCSEEEEETC--TTTHHHHHTTTT-TCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEE
T ss_pred             CCCCCEEEEECC--CCCHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEc
Confidence            346899999983  457777788877 367999999999988888754321      12222222222223469998865


Q ss_pred             CC-----C------cHHHHHhhccCCEEEEEc
Q 023273          222 VG-----Q------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       222 ~g-----~------~~~~~~~l~~~G~~v~~g  242 (284)
                      ..     .      +..+.+.|+++|++++..
T Consensus       154 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  185 (241)
T 2ex4_A          154 WVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD  185 (241)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             chhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence            32     1      256778899999999864

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=94.83  E-value=0.013  Score=49.55  Aligned_cols=72  Identities=19%  Similarity=0.331  Sum_probs=46.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-cccccCCC--cccEEEeCCCC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPE--KFDVVFDAVGQ  224 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~--~~d~vid~~g~  224 (284)
                      +++|+|+|++|.+|...++.+... +|.+|+++++++.+.....  +...+ .|..+ +.+.+.-+  ++|+||++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~   78 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN--SGPFEVVNALDFNQIEHLVEVHKITDIYLMAAL   78 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH--SSCEEECCTTCHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC--CCceEEecCCCHHHHHHHHhhcCCCEEEECCcc
Confidence            367999999999999988877762 2789999998766543222  22211 12211 11222222  79999999873

>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43

Probab=94.83  E-value=0.18  Score=40.22  Aligned_cols=92  Identities=17%  Similarity=0.163  Sum_probs=59.1

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CC-cEEeeCCCcccccCCCcccEEEeC
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA-DLAIDYTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~-~~~~~~~~~~~~~~~~~~d~vid~  221 (284)
                      .+.++.+||-+|+  +.|..+..+++.  +.+++.++.+++..+.+++.    +. ..++..+...+....+.+|+|+..
T Consensus        35 ~~~~~~~vLDlG~--G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~  110 (227)
T 1ve3_A           35 YMKKRGKVLDLAC--GVGGFSFLLEDY--GFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFI  110 (227)
T ss_dssp             SCCSCCEEEEETC--TTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEE
T ss_pred             hcCCCCeEEEEec--cCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEc
Confidence            3456889999983  345666667765  45999999999887777542    21 223332222222123579988865


Q ss_pred             CC----C-------cHHHHHhhccCCEEEEEc
Q 023273          222 VG----Q-------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       222 ~g----~-------~~~~~~~l~~~G~~v~~g  242 (284)
                      ..    .       ...+.+.|+++|++++..
T Consensus       111 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  142 (227)
T 1ve3_A          111 DSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF  142 (227)
T ss_dssp             SCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CchHhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence            33    1       256778999999998763

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=94.82  E-value=0.048  Score=49.44  Aligned_cols=43  Identities=9%  Similarity=0.161  Sum_probs=34.3

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhc--CCeEEEEeCChhhH
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVF--GASKVAATSSTAKL  189 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~--g~~vi~~~~~~~~~  189 (284)
                      ....+++|+|+||+|.+|...++.+....  |.+|+++++++++.
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~  113 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE  113 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH
Confidence            34568899999999999999887776622  68999999976644

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=94.79  E-value=0.025  Score=48.56  Aligned_cols=73  Identities=15%  Similarity=0.197  Sum_probs=45.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH-HHHHHcCCcEEee--CCC-cccccCCCc--ccEEEeCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-DLLRSLGADLAID--YTK-ENIEDLPEK--FDVVFDAVG  223 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~-~~~~~~g~~~~~~--~~~-~~~~~~~~~--~d~vid~~g  223 (284)
                      .+.+|||+||+|.+|...++.+... |.+|+++++++.+. +.+.++....++.  ..+ +.+...-++  +|+||++++
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~   98 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLER-GDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAA   98 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECce
Confidence            4679999999999999999888874 89999999865422 1111111112222  111 112222234  999999987

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=94.77  E-value=0.037  Score=46.20  Aligned_cols=87  Identities=16%  Similarity=0.229  Sum_probs=56.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCC-CcccccCCCc-ccEEEeCCCC---
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYT-KENIEDLPEK-FDVVFDAVGQ---  224 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~-~~~~~~~~~~-~d~vid~~g~---  224 (284)
                      +.+|||+| +|.+|...++.+... |.+|+++++++++..    .+...+ .|.. .+.+.+..++ +|+||.+++.   
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~----~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~   76 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQ-GHEVTGLRRSAQPMP----AGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEY   76 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHT-TCCEEEEECTTSCCC----TTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHH
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCccccc----cCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCC
Confidence            46899999 699999999988884 999999999876531    122211 1221 1223333334 9999998752   


Q ss_pred             ------------cHHHHHhhccC--CEEEEEcC
Q 023273          225 ------------CDKALKAVKEG--GRVVSIIG  243 (284)
Q Consensus       225 ------------~~~~~~~l~~~--G~~v~~g~  243 (284)
                                  ...+++.++..  +++|.++.
T Consensus        77 ~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS  109 (286)
T 3gpi_A           77 SDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS  109 (286)
T ss_dssp             C-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence                        13455555543  58888754

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=94.75  E-value=0.072  Score=49.88  Aligned_cols=73  Identities=19%  Similarity=0.327  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh---------hhHHH----HHHcCCcEEeeCCCc-ccccC----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST---------AKLDL----LRSLGADLAIDYTKE-NIEDL----  211 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~---------~~~~~----~~~~g~~~~~~~~~~-~~~~~----  211 (284)
                      .+++++|+|+++++|++.++..... |++|++.+++.         ++.+.    ++..+...+.|..+. +....    
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~-Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~   85 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKL-GAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETA   85 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHc-CCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHH
Confidence            5788999999999999988888774 99999987643         33332    233444334443221 11111    


Q ss_pred             ---CCcccEEEeCCC
Q 023273          212 ---PEKFDVVFDAVG  223 (284)
Q Consensus       212 ---~~~~d~vid~~g  223 (284)
                         -+.+|++++++|
T Consensus        86 ~~~~G~iDiLVnNAG  100 (604)
T 2et6_A           86 VKNFGTVHVIINNAG  100 (604)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence               357999999988

>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}

Probab=94.74  E-value=0.11  Score=43.34  Aligned_cols=89  Identities=18%  Similarity=0.305  Sum_probs=60.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CC---cEEeeCCCcccc-cCCCcccEEEeC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA---DLAIDYTKENIE-DLPEKFDVVFDA  221 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~---~~~~~~~~~~~~-~~~~~~d~vid~  221 (284)
                      ++.+||-+|+  +.|..+..+++.  +.+++.++.+++..+.+++.    +.   ..++..+..... ...+.+|+|+..
T Consensus        68 ~~~~vLDiGc--G~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~  143 (285)
T 4htf_A           68 QKLRVLDAGG--GEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFH  143 (285)
T ss_dssp             SCCEEEEETC--TTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEE
T ss_pred             CCCEEEEeCC--cchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEEC
Confidence            4679999983  347777778775  78999999999988877643    22   123333322232 224679999865


Q ss_pred             CC-----C----cHHHHHhhccCCEEEEEc
Q 023273          222 VG-----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       222 ~g-----~----~~~~~~~l~~~G~~v~~g  242 (284)
                      ..     +    +..+.+.|+++|++++..
T Consensus       144 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (285)
T 4htf_A          144 AVLEWVADPRSVLQTLWSVLRPGGVLSLMF  173 (285)
T ss_dssp             SCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             chhhcccCHHHHHHHHHHHcCCCeEEEEEE
Confidence            32     2    267888999999998763

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=94.73  E-value=0.075  Score=45.88  Aligned_cols=45  Identities=18%  Similarity=0.257  Sum_probs=36.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG  196 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g  196 (284)
                      -.|.+|.|+| .|.+|...++.++.. |.+|++.++++++ +.+.+.|
T Consensus       144 l~g~~vgIIG-~G~iG~~vA~~l~~~-G~~V~~~d~~~~~-~~~~~~g  188 (333)
T 2d0i_A          144 LYGKKVGILG-MGAIGKAIARRLIPF-GVKLYYWSRHRKV-NVEKELK  188 (333)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHGGG-TCEEEEECSSCCH-HHHHHHT
T ss_pred             CCcCEEEEEc-cCHHHHHHHHHHHHC-CCEEEEECCCcch-hhhhhcC
Confidence            3578999999 899999999999984 9999999987765 4444444

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=94.72  E-value=0.088  Score=47.48  Aligned_cols=73  Identities=26%  Similarity=0.465  Sum_probs=47.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh--H-HHHHHcCCcEE-eeCCC-cccccC-------CC-ccc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK--L-DLLRSLGADLA-IDYTK-ENIEDL-------PE-KFD  216 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~--~-~~~~~~g~~~~-~~~~~-~~~~~~-------~~-~~d  216 (284)
                      +++++||+|++|++|.+.++..... |++++++.+++..  . +..++.+...+ .|-.+ +.....       .+ .+|
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~-Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARD-GATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHC-CCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            5789999999999999988887774 9999998875432  2 22234443321 12221 111111       22 499


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      ++|+++|
T Consensus       291 ~lV~nAG  297 (454)
T 3u0b_A          291 ILVNNAG  297 (454)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999988

>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}

Probab=94.70  E-value=0.075  Score=44.40  Aligned_cols=91  Identities=15%  Similarity=0.186  Sum_probs=60.7

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CC-cEEeeCCCcccccCCCcccEEEeCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA-DLAIDYTKENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~-~~~~~~~~~~~~~~~~~~d~vid~~  222 (284)
                      ..++.+||-+| +| .|..+..+++.  +.+++.++.+++.++.+++.    +. ..++..+...... .+.+|+|+.+.
T Consensus       118 ~~~~~~vLD~G-cG-~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~  192 (286)
T 3m70_A          118 IISPCKVLDLG-CG-QGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTV  192 (286)
T ss_dssp             HSCSCEEEEES-CT-TCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECS
T ss_pred             ccCCCcEEEEC-CC-CCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEcc
Confidence            34789999998 33 47777777775  77999999999988777542    32 1222222222222 56799999754


Q ss_pred             C----C-------cHHHHHhhccCCEEEEEcC
Q 023273          223 G----Q-------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       223 g----~-------~~~~~~~l~~~G~~v~~g~  243 (284)
                      .    .       ...+.+.|+++|.++++..
T Consensus       193 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  224 (286)
T 3m70_A          193 VFMFLNRERVPSIIKNMKEHTNVGGYNLIVAA  224 (286)
T ss_dssp             SGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             chhhCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            2    1       2567889999999776643

>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42

Probab=94.70  E-value=0.13  Score=41.94  Aligned_cols=97  Identities=14%  Similarity=0.079  Sum_probs=64.5

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC--c--EEeeCCCcccccCCCcccEEE
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA--D--LAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~--~--~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      ......++.+||-+|+  +.|..+..+++. +..+++.++.+++.++.+++...  .  .++..+...+....+.+|+|+
T Consensus        87 ~~l~~~~~~~vLDiG~--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~  163 (254)
T 1xtp_A           87 ASLPGHGTSRALDCGA--GIGRITKNLLTK-LYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIV  163 (254)
T ss_dssp             HTSTTCCCSEEEEETC--TTTHHHHHTHHH-HCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEE
T ss_pred             HhhcccCCCEEEEECC--CcCHHHHHHHHh-hcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEE
Confidence            3445678899999983  457777778777 36679999999998888876432  1  122222222222235799998


Q ss_pred             eCCC--C---------cHHHHHhhccCCEEEEEcC
Q 023273          220 DAVG--Q---------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       220 d~~g--~---------~~~~~~~l~~~G~~v~~g~  243 (284)
                      ....  .         +..+.+.|+++|++++...
T Consensus       164 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  198 (254)
T 1xtp_A          164 IQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN  198 (254)
T ss_dssp             EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence            6532  1         2567889999999998753

>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=94.67  E-value=0.13  Score=40.39  Aligned_cols=88  Identities=20%  Similarity=0.227  Sum_probs=61.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-cEEeeCCCcccccCCCcccEEEeCCC------
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDAVG------  223 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~d~vid~~g------  223 (284)
                      +.+||-+|+  +.|..+..+++.  +.+++.++.+++..+.+++... ..++..+...+....+.+|+|+....      
T Consensus        42 ~~~vLDiGc--G~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~  117 (203)
T 3h2b_A           42 DGVILDVGS--GTGRWTGHLASL--GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGP  117 (203)
T ss_dssp             CSCEEEETC--TTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCT
T ss_pred             CCeEEEecC--CCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCH
Confidence            789999983  356677777775  7799999999998888876532 23333332233323467999987432      


Q ss_pred             -C----cHHHHHhhccCCEEEEEc
Q 023273          224 -Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       224 -~----~~~~~~~l~~~G~~v~~g  242 (284)
                       .    +..+.+.|+++|++++..
T Consensus       118 ~~~~~~l~~~~~~L~pgG~l~i~~  141 (203)
T 3h2b_A          118 GELPDALVALRMAVEDGGGLLMSF  141 (203)
T ss_dssp             TTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCcEEEEEE
Confidence             1    267888999999998764

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=94.63  E-value=0.013  Score=49.66  Aligned_cols=36  Identities=22%  Similarity=0.301  Sum_probs=32.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      +.+|||+||+|.+|...++.+... |.+|+++++++.
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~   42 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVAS-GEEVTVLDDLRV   42 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT-TCCEEEECCCSS
T ss_pred             CCeEEEECCCChHHHHHHHHHHHC-CCEEEEEecCCc
Confidence            679999999999999999988884 899999998665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	284
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	6e-24
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	2e-23
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	2e-23
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	7e-23
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	2e-21
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	1e-20
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	2e-20
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	1e-18
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	2e-18
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	3e-18
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	6e-18
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	2e-17
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	3e-17
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	3e-17
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	8e-17
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	2e-15
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	8e-15
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	3e-14
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	4e-14
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	6e-14
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	3e-13
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	4e-13
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	5e-13
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	1e-12
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	2e-12
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	3e-12
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	9e-12
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	1e-11
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	2e-11
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	3e-11
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	3e-11
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	4e-11
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	1e-09
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	4e-09
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	5e-09
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	5e-09
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	1e-08
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	3e-08
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	4e-08
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	4e-08
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	4e-08
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	6e-08
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	1e-07
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	1e-07
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	2e-07
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	5e-07
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	7e-07
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	9e-07
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	1e-06
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	1e-06
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	3e-06
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	4e-06
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	3e-05
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	2e-04
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	5e-04
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	0.003
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.003
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	0.003

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 92.6 bits (229), Expect = 6e-24
 Identities = 32/158 (20%), Positives = 54/158 (34%), Gaps = 9/158 (5%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            +A+V  +          +T + +  L E  VL++V  +++N  D    L +        
Sbjct: 4   FQAFVVNKTETEF-TAGVQT-ISMDDLPEGDVLVRVHYSSVNYKD---GLASIPDGKIVK 58

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
                  +      V SQ  +F+ GDEV     E         G  +EY  +    L   
Sbjct: 59  TYPFVPGIDLAGVVVSSQHPRFREGDEVIATGYE---IGVTHFGGYSEYARLHGEWLVPL 115

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG 158
           PK L    A  + LA               G++++ L 
Sbjct: 116 PKGLER-IAQEISLAELPQALKRILRGELRGRTVVRLA 152

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 91.9 bits (227), Expect = 2e-23
 Identities = 43/170 (25%), Positives = 66/170 (38%), Gaps = 11/170 (6%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            +A   ++  +    +  +T +    L +D VLIKV  +    I++K  L   +  +   
Sbjct: 4   FQALQAEKNADD-VSVHVKT-ISTEDLPKDGVLIKVAYSG---INYKDGLAGKAGGNIVR 58

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
                  +      V S   +F  GDEV     E       R+G L+EY +V  + L   
Sbjct: 59  EYPLILGIDAAGTVVSSNDPRFAEGDEVIATSYE---LGVSRDGGLSEYASVPGDWLVPL 115

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQL 170
           P+NLS  EA    L T    E        A K IL     G V   +++L
Sbjct: 116 PQNLSLKEAMVDQLLTIVDREVSLEETPGALKDILQNRIQGRV---IVKL 162

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 37/179 (20%), Positives = 62/179 (34%), Gaps = 26/179 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP- 59
           + A +YK     Q+ L+ E    +P  +ED+VL+++    +   D         A     
Sbjct: 3   LSAVLYK-----QNDLRLEQ-RPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVK 56

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRN---------------- 103
            P + G++ +G V KVG  VK  K GD V  +                            
Sbjct: 57  DPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATP 116

Query: 104 ---GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
              G+LA Y     +     P N +  +  +     E   +  E +   A  +I V+  
Sbjct: 117 PDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMIS 175

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 90.7 bits (224), Expect = 7e-23
 Identities = 45/176 (25%), Positives = 66/176 (37%), Gaps = 25/176 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V   YG   + L+ E  V+VP     QVL+K+ A+ +   D     G +       
Sbjct: 6   MKAAVVHAYG---APLRIEE-VKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPL- 60

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDH-------------------PK 101
           P IPG++  G V  VGS V + K GD V       A                        
Sbjct: 61  PFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYS 120

Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVL 157
            NG  AEY   + N + + PKN+                + + R+    G+ +L +
Sbjct: 121 VNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM-RAGQIEGRIVLEM 175

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.3 bits (212), Expect = 2e-21
 Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 22/170 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A    E+G  + VLK  +++ VP  ++ QVLIKV A  +NP++     G + +    L
Sbjct: 3   MRAVRVFEFGGPE-VLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTY-SRKPLL 60

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P  PG DVAGV+E VG     FK GD V+             +G  AEY    ++ +   
Sbjct: 61  PYTPGSDVAGVIEAVGDNASAFKKGDRVF--------TSSTISGGYAEYALAADHTVYKL 112

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQL 170
           P+ L  V  +  PL                     ++ G+G  G M++ L
Sbjct: 113 PEKLKPVIGSQYPLEKVAEAHE------------NIIHGSGATGKMILLL 150

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 84.2 bits (207), Expect = 1e-20
 Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 30/181 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF------S 54
           M+A    E G     L  +  + VP  +  QVLIKV AA +   D     G F       
Sbjct: 1   MRAVRLVEIGKP---LSLQE-IGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVE 56

Query: 55  ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPK------------- 101
                LP   G+++AG +E+VG +V  +  GD V  +  +   +                
Sbjct: 57  DLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPR 116

Query: 102 -----RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT-ETAYEGLERSAFSAGKSIL 155
                 +G+ AEY  V       K + +  +   ++ L     A + LE    + G+ +L
Sbjct: 117 WLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLEN-FKAIGRQVL 175

Query: 156 V 156
           +
Sbjct: 176 I 176

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 84.5 bits (208), Expect = 2e-20
 Identities = 41/197 (20%), Positives = 68/197 (34%), Gaps = 46/197 (23%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA V  E G     L  E  +EV   +  +V IK++A A+   D   + GA      P+
Sbjct: 7   CKAAVAWEAGKP---LSIEE-IEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 62

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------------------------- 88
               G+  AG+VE VG  V K K GD V                                
Sbjct: 63  I--LGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120

Query: 89  -------YGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141
                        K + H     + +EYT V +  +A     +   E  +  L+ +   +
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINK 180

Query: 142 GLER-SAFSAGKSILVL 157
             E   +  + ++++ +
Sbjct: 181 AFELMHSGKSIRTVVKI 197

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.6 bits (195), Expect = 1e-18
 Identities = 37/182 (20%), Positives = 59/182 (32%), Gaps = 27/182 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFK-RMLGAFSATDSP 59
             + V    G     L+ E N  +P    ++VL+++ +  +   D      G        
Sbjct: 8   NLSLVVHGPG----DLRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVK 62

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG-------------------DINEKALDHP 100
            P + G++ +G VEKVGS VK  K GD V                       +      P
Sbjct: 63  KPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATP 122

Query: 101 KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA 160
             +G+L  +           P N+  +     PL    A E  E      G  I++    
Sbjct: 123 PDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPLE--KALEAFETFKKGLGLKIMLKCDP 180

Query: 161 GG 162
             
Sbjct: 181 SD 182

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 78.7 bits (192), Expect = 2e-18
 Identities = 22/173 (12%), Positives = 58/173 (33%), Gaps = 6/173 (3%)

Query: 1   MKAWVYKEYGNSQSVLKFET-NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP 59
            +A +Y ++G  + VL  ++  ++  +L  ++V++K + + +NP D  ++ G + +  + 
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
                  + A      G         +    +  +  +      G+   +    ++    
Sbjct: 64  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123

Query: 120 KPKNLSFVEAASLPLATETAYEGL--ERSAFSAGKSILVLGGA-GGVGTMVIQ 169
            P        A+      T  + +            +   G A    G  +I 
Sbjct: 124 LPNP--AQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT 174

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 78.1 bits (191), Expect = 3e-18
 Identities = 42/177 (23%), Positives = 64/177 (36%), Gaps = 27/177 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V +++      LK +  VE P++   +VL+++ A  +   D              L
Sbjct: 1   MKAAVVEQFK---EPLKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAA-HGDWPVKPKL 55

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------------YGDINEKALDHPK 101
           P IPG++  G+VE+VG  V   KVGD V                         +      
Sbjct: 56  PLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYS 115

Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG 158
            +G  AEY     + +   P N    E   L    E     L+      G+ +L L 
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNTII-EVQPLEKINEVFDRMLK--GQINGRVVLTLE 169

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 76.5 bits (187), Expect = 6e-18
 Identities = 30/139 (21%), Positives = 53/139 (38%), Gaps = 8/139 (5%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           ++A + ++    +++   +T ++   L E  V + V  ++LN  D    +          
Sbjct: 1   LQALLLEQQD-GKTLASVQT-LDESRLPEGDVTVDVHWSSLNYKDA-LAITGKGKIIRNF 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P IPG D AG V    S+  +F  G EV   +           G LAE   V+ + L   
Sbjct: 58  PMIPGIDFAGTVRT--SEDPRFHAGQEV---LLTGWGVGENHWGGLAEQARVKGDWLVAM 112

Query: 121 PKNLSFVEAASLPLATETA 139
           P+  +  E +         
Sbjct: 113 PQGQAAKEISLSEAPNFAE 131

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.0 bits (186), Expect = 2e-17
 Identities = 26/183 (14%), Positives = 60/183 (32%), Gaps = 31/183 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            +    + + + ++  K +   +     +  + IK+ A  +   D     G +   +  +
Sbjct: 7   FEGIAIQSHEDWKNPKKTK--YDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG--NMKM 62

Query: 61  PTIPGYDVAGVVEKVGSQVKK-FKVGD--------------------------EVYGDIN 93
           P + G+++ G V K+G +     KVG                           +     +
Sbjct: 63  PLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYS 122

Query: 94  EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKS 153
           +   D     G  A Y  V E+ +   P+N+              A+E +E+       +
Sbjct: 123 QPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERMEKGDVRYRFT 182

Query: 154 ILV 156
           ++ 
Sbjct: 183 LVG 185

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 74.5 bits (182), Expect = 3e-17
 Identities = 37/157 (23%), Positives = 52/157 (33%), Gaps = 26/157 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWV K  G    +     ++  P   E +V+++V A  LN  D    LGA+     P 
Sbjct: 1   MKAWVLKRLGGPLEL----VDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPP 56

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
                          G +V     G      +           G LAE  AV +  L   
Sbjct: 57  FIP------------GMEVVGVVEGRRYAALVP---------QGGLAERVAVPKGALLPL 95

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVL 157
           P+    V         E A+  L       GK ++ L
Sbjct: 96  PEGRPVVGPVFPFAEAEAAFRALLDRG-HTGKVVVRL 131

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 75.7 bits (185), Expect = 3e-17
 Identities = 32/197 (16%), Positives = 66/197 (33%), Gaps = 46/197 (23%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA V  E       L  E  +EV     +++ IK++A  +   D   +           
Sbjct: 9   CKAAVAWEANKP---LVIEE-IEVDVPHANEIRIKIIATGVCHTDLYHL--FEGKHKDGF 62

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYG------------------------------ 90
           P + G++ AG+VE VG  V +F+ G++V                                
Sbjct: 63  PVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPD 122

Query: 91  ---------DINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141
                        + +       + ++YT V +  +A    ++   E  +  +  E+  +
Sbjct: 123 VMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVND 182

Query: 142 GLERSA-FSAGKSILVL 157
            ++        +++L L
Sbjct: 183 AIDLMKHGKCIRTVLSL 199

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 74.9 bits (183), Expect = 8e-17
 Identities = 42/201 (20%), Positives = 67/201 (33%), Gaps = 52/201 (25%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA +  + G+    L  E  +EV   +  +V I+V+A  + P D         A     
Sbjct: 9   CKAAIAWKTGSP---LCIEE-IEVSPPKACEVRIQVIATCVCPTDINATDPKKKALF--- 61

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYG------------------------------ 90
           P + G++ AG+VE VG  V  FK GD+V                                
Sbjct: 62  PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121

Query: 91  -------------DINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATE 137
                            +++ H     S ++YT V E  LA            +  L  E
Sbjct: 122 IDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFE 181

Query: 138 TAYEGLERSAFSAGKSILVLG 158
           +  + ++      GKSI  + 
Sbjct: 182 SINDAID--LMKEGKSIRTIL 200

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 70.7 bits (172), Expect = 2e-15
 Identities = 34/224 (15%), Positives = 60/224 (26%), Gaps = 73/224 (32%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           + A V    G      + +  +++   + D+VL+KVVA  +   D       +     PL
Sbjct: 4   IIAAVTPCKGAD---FELQA-LKIRQPQGDEVLVKVVATGMCHTDLIVRDQKY---PVPL 56

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------------------------- 88
           P + G++ +G++E +G  V + +VGD V                                
Sbjct: 57  PAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGA 116

Query: 89  --------YGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140
                            DH     S A Y    EN      K+  F +            
Sbjct: 117 DSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLV---------- 166

Query: 141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184
                                 +    I   K +     +   +
Sbjct: 167 ---------------KFYAFDEINQAAIDSRKGI-TLKPIIKIA 194

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 69.2 bits (168), Expect = 8e-15
 Identities = 33/207 (15%), Positives = 49/207 (23%), Gaps = 37/207 (17%)

Query: 1   MKAWVYKEYGNS--QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS 58
            +  VY   G    Q +   +         E  V++KVV+  +   D   + G  +A   
Sbjct: 2   NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVG 61

Query: 59  ---------------PLPTIPGYDVAGVVE-----------KVGSQVKKFKVGDEVYGDI 92
                                       V            K         V     G  
Sbjct: 62  LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGA 121

Query: 93  NEKALDHPKRNGSLAEYTAV--EENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSA 150
                      G  AEY  V   +  L   P     +E  ++          L+ +    
Sbjct: 122 YGYVDMGDWTGG-QAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISLDDAPRGY 180

Query: 151 GKSILVLGGAGGVGTMVIQLAKHVFGA 177
           G+       AG     VI   K  F A
Sbjct: 181 GE-----FDAGVPKKFVIDPHKT-FSA 201

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 67.7 bits (164), Expect = 3e-14
 Identities = 28/189 (14%), Positives = 56/189 (29%), Gaps = 40/189 (21%)

Query: 124 LSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA 182
           L+  + A++ +   TAY  L      + GK   +  G              +   + ++ 
Sbjct: 1   LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISV 60

Query: 183 TSSTAKLDLL----RSLGADLAIDYTKENIEDLPEKF-----------DVVFDAVG--QC 225
                 LD +    + LGA   I   + N  +                 +  + VG    
Sbjct: 61  IRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSS 120

Query: 226 DKALKAVKEGGRVVSIIGSVTPPASS--------------FVLTS--------DGSILEK 263
               + +   G +++  G    P +               F +T           S L +
Sbjct: 121 TGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQ 180

Query: 264 LNPYFESGK 272
           +  ++E GK
Sbjct: 181 IIAWYEEGK 189

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 67.2 bits (163), Expect = 4e-14
 Identities = 43/197 (21%), Positives = 65/197 (32%), Gaps = 48/197 (24%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA V  E          E  VEV   +  +V IK+VA  +   D   + G       PL
Sbjct: 9   CKAAVLWEEKKP---FSIEE-VEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT---PL 61

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINE-------------------------- 94
           P I G++ AG+VE +G  V   + GD+V                                
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121

Query: 95  -------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141
                        K + H     + ++YT V+E  +A      +     +  L  E   E
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFEKINE 181

Query: 142 GLERSAFSAGKSILVLG 158
           G       +G+SI  + 
Sbjct: 182 GF--DLLRSGESIRTIL 196

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 66.8 bits (162), Expect = 6e-14
 Identities = 38/206 (18%), Positives = 61/206 (29%), Gaps = 56/206 (27%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA V  E       L  ET + V   +  +V IK++A+ +   D   +        S  
Sbjct: 9   CKAAVAWEPHKP---LSLET-ITVAPPKAHEVRIKILASGICGSDSSVL---KEIIPSKF 61

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------------------------- 88
           P I G++  GVVE +G+ V   K GD+V                                
Sbjct: 62  PVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTG 121

Query: 89  -------YGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141
                        K + +     +  EYT V +  +A     ++                
Sbjct: 122 LMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKIN---------VNFLVST 172

Query: 142 GLERSAFSAGKSILVLGGAGGVGTMV 167
            L     +    +L   G G    M+
Sbjct: 173 KLTLDQINKAFELLSS-GQGVRSIMI 197

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 64.2 bits (155), Expect = 3e-13
 Identities = 34/195 (17%), Positives = 61/195 (31%), Gaps = 43/195 (22%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MK +           L +    E P       +++ +A +    D   +     A     
Sbjct: 1   MKGFAMLGINK----LGWIE-KERPVAGSYDAIVRPLAVSPCTSDIHTV--FEGALGDRK 53

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALD---------------------H 99
             I G++  G V +VGS+VK FK GD V                                
Sbjct: 54  NMILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFS 113

Query: 100 PKRNGSLAEYTAV---EENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILV 156
             ++G   EY  V   + NL  L PK++   +  +        Y G +       +++L+
Sbjct: 114 NFKDGVFGEYFHVNDADMNLAIL-PKDVDLSKLVT------HVYHGFDH----IEEALLL 162

Query: 157 LGGAGGVGTMVIQLA 171
           +        +   + 
Sbjct: 163 M-KDKPKDLIKAVVI 176

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 63.9 bits (154), Expect = 4e-13
 Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 25/175 (14%)

Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           KA    EY      L+ E +V+ P L     V++++  A +   D   + G +     P 
Sbjct: 1   KAARLHEYNKP---LRIE-DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPK 56

Query: 61  PTIPGYDVAGV-VEKVGSQVKKFKVGDEVYGDINEKALDHP------------------K 101
                       +E+V   V+  + GD V                               
Sbjct: 57  LPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLN 116

Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILV 156
            +G  AE+       +   PK++                E LE+     G+++L+
Sbjct: 117 IDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEK-GEVLGRAVLI 170

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 63.8 bits (154), Expect = 5e-13
 Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 123 NLSFVEAASLPLATETAYEGLERSAFS-AGKSILVLGGAGGVGTMVIQLAKHVFGASKVA 181
               VE A L  A  TAY  ++++A +    + + + G GG+G + +QL K +  A+ +A
Sbjct: 3   REKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIA 62

Query: 182 ATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAVG---QCDKALKAVK 233
                 KL L   LGAD  +D  ++ ++ +         +V  D VG     D     + 
Sbjct: 63  LDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG 122

Query: 234 EGGRVVSI 241
             GR++ +
Sbjct: 123 RMGRLIIV 130

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 62.9 bits (152), Expect = 1e-12
 Identities = 26/190 (13%), Positives = 60/190 (31%), Gaps = 47/190 (24%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
             A V +++      L ++   E+  +    +L+++++A +   D     G       P+
Sbjct: 5   AHAMVLEKFNQP---LVYK-EFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPI 60

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGD---------------------------------E 87
                ++ AG V +V  + +                                       +
Sbjct: 61  ILG--HEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRK 118

Query: 88  VYGDINEKALDHPKRNGSLAEYTAV-EENLLALKPKNLSFVEAASLPLATETAYEGLERS 146
           VYG IN    ++P   G  + +  +  E  +    + ++       PL    A + LE  
Sbjct: 119 VYG-INRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRL----PLKE--ANKALELM 171

Query: 147 AFSAGKSILV 156
                  +++
Sbjct: 172 ESREALKVIL 181

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 61.2 bits (147), Expect = 2e-12
 Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 14/157 (8%)

Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLP 61
               + ++G    VL+           E+++ ++  A  +N ID     G +      LP
Sbjct: 2   TRIEFHKHGGP-EVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPP--SLP 57

Query: 62  TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKP 121
           +  G + AG+V KVGS VK  K GD V               G+ +    +  +  A+ P
Sbjct: 58  SGLGTEAAGIVSKVGSGVKHIKAGDRVVY--------AQSALGAYSSVHNIIADKAAILP 109

Query: 122 KNL--SFVEAASLPLATETAYEGLERSAFSAGKSILV 156
             +     E    PL        +  S  + G S+L+
Sbjct: 110 AAIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI 146

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 61.7 bits (148), Expect = 3e-12
 Identities = 36/170 (21%), Positives = 69/170 (40%), Gaps = 21/170 (12%)

Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
           L+ VEAA L  +  T Y  + +++    K++LV+G  GG+GTM +Q+AK V GA+ +   
Sbjct: 1   LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD 60

Query: 184 SSTAKLDLLRSLGADLAIDYTKENIEDLPEK---------FDVVFDAVGQCDKALKAVKE 234
                ++  +  GAD  I+ + ++      +            + ++        KA+ +
Sbjct: 61  VREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAK 120

Query: 235 GGRVVSIIGSVTPPASSFV------LTSDGSI------LEKLNPYFESGK 272
            G+ V +                  +   GS+         +    E+GK
Sbjct: 121 QGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGK 170

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 60.6 bits (146), Expect = 9e-12
 Identities = 26/150 (17%), Positives = 48/150 (32%), Gaps = 26/150 (17%)

Query: 128 EAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187
           +   L     T Y G   +    G ++ V  GAG VG      A+ +  A  +    + A
Sbjct: 3   DLTCLSDILPTGYHGAVTAGVGPGSTVYVA-GAGPVGLAAAASARLLGAAVVIVGDLNPA 61

Query: 188 KLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVG------------------ 223
           +L   ++ G ++A       + +         + D   DAVG                  
Sbjct: 62  RLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPAT 121

Query: 224 QCDKALKAVKEGGRVVSIIGSVTPPASSFV 253
             +  ++  +  G++  I G         V
Sbjct: 122 VLNSLMQVTRVAGKIG-IPGLYVTEDPGAV 150

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 60.3 bits (145), Expect = 1e-11
 Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 11/128 (8%)

Query: 124 LSFVEAASLPLATETAYEGL----ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           L+  EA ++  A  TA   +    E         +LV G  GGVG++ + +     G + 
Sbjct: 1   LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAK-RGYTV 59

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIEDLPE----KFDVVFDAVG--QCDKALKAVK 233
            A+T   A+ D LR LGA   +       E +      ++    D VG       L  ++
Sbjct: 60  EASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMR 119

Query: 234 EGGRVVSI 241
            GG V   
Sbjct: 120 YGGAVAVS 127

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 59.2 bits (142), Expect = 2e-11
 Identities = 37/176 (21%), Positives = 60/176 (34%), Gaps = 29/176 (16%)

Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
           +    A  +     T + G E +    G S++V+ G G VG M I  AK       +   
Sbjct: 1   MPLENAVMITDMMTTGFHGAELADIEMGSSVVVI-GIGAVGLMGIAGAKLRGAGRIIGVG 59

Query: 184 SSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVG---QCDKALKAVKE 234
           S    ++  +  GA   ++Y   +IED        +  D V  A G      +A+K VK 
Sbjct: 60  SRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKP 119

Query: 235 GGRVVSIIGSVTPPASSFV-----------LTSDGSI-------LEKLNPYFESGK 272
           GG +   I       +  +            T  G +        E+L       +
Sbjct: 120 GGIIS-NINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERLRDMVVYNR 174

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 56.1 bits (135), Expect = 3e-11
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 5/78 (6%)

Query: 124 LSFVEAASLPLATETAYEGL----ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           L   +A  +  A  TA   +    +         I+V G +GGVG+  + L     G   
Sbjct: 1   LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHK-LGYQV 59

Query: 180 VAATSSTAKLDLLRSLGA 197
           VA +   +  + L+SLGA
Sbjct: 60  VAVSGRESTHEYLKSLGA 77

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 58.9 bits (141), Expect = 3e-11
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)

Query: 124 LSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA 182
           +SF +AA+  L   T Y  L ++      +  L    AGGVG +  Q AK   GA  +  
Sbjct: 1   ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKA-LGAKLIGT 59

Query: 183 TSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQC--DKALKAVKE 234
             +  K       GA   I+Y +E++ +        +K  VV+D+VG+   +++L  ++ 
Sbjct: 60  VGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQR 119

Query: 235 GGR 237
            G 
Sbjct: 120 RGL 122

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 58.4 bits (140), Expect = 4e-11
 Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 6/122 (4%)

Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
                 A L  A  T Y  L       GK + V+ G GG+G M I+   H  GA  VA T
Sbjct: 4   EQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVV-GIGGLGHMGIK-LAHAMGAHVVAFT 61

Query: 184 SSTAKLDLLRSLGADLAIDYTKEN-IEDLPEKFDVVFDAV---GQCDKALKAVKEGGRVV 239
           +S AK +  ++LGAD  ++    + +    + FD + + V      D     +K  G + 
Sbjct: 62  TSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMT 121

Query: 240 SI 241
            +
Sbjct: 122 LV 123

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 1e-09
 Identities = 38/172 (22%), Positives = 63/172 (36%), Gaps = 26/172 (15%)

Query: 125 SFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
           +F E A + PL+         R   + G  +LV  GAG +G + + +AK +  A  V   
Sbjct: 2   TFEEGALIEPLSV--GIHACRRGGVTLGHKVLVC-GAGPIGMVTLLVAKAMGAAQVVVTD 58

Query: 184 SSTAKLDLLRSLGADLAIDYTKENIED--------LPEKFDVVFDAVG---QCDKALKAV 232
            S  +L   + +GADL +  +KE+ ++        L  K +V  +  G        + A 
Sbjct: 59  LSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYAT 118

Query: 233 KEGGRVVSII---GSVTPPASSFV---LTSDGSI-----LEKLNPYFESGKV 273
           + GG +V +       T P        +   G                S  V
Sbjct: 119 RSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSV 170

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 52.8 bits (125), Expect = 4e-09
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 12/141 (8%)

Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
           + F E A +  A  T Y+GL+++    G+ + +  G GG+G + +Q A+   G    A  
Sbjct: 1   VEFAEIAPILCAGVTVYKGLKQTNARPGQWVAI-SGIGGLGHVAVQYARA-MGLHVAAID 58

Query: 184 SSTAKLDLLRSLGADLAIDYTKENIEDLPEK-------FDVVFDAVGQCDKALKAVKEGG 236
              AKL+L R LGA L ++  +E+  +  ++         V   +     +A+   + GG
Sbjct: 59  IDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGG 118

Query: 237 RVVSII---GSVTPPASSFVL 254
            +  +    G    P    VL
Sbjct: 119 TIALVGLPPGDFPTPIFDVVL 139

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 52.3 bits (124), Expect = 5e-09
 Identities = 27/129 (20%), Positives = 42/129 (32%), Gaps = 12/129 (9%)

Query: 126 FVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184
             +   +     T Y    + A  + G +  V G  GGVG  VI   K    A  +    
Sbjct: 3   LEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDI 61

Query: 185 STAKLDLLRSLGADLAIDYTKE-------NIEDLPEKFDVVFDAVG---QCDKALKAVKE 234
           +  K    + +GA   ++             E      D  F+ +G       AL   +E
Sbjct: 62  NKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE 121

Query: 235 GGRVVSIIG 243
              V  I+G
Sbjct: 122 AYGVSVIVG 130

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 52.3 bits (124), Expect = 5e-09
 Identities = 26/129 (20%), Positives = 40/129 (31%), Gaps = 12/129 (9%)

Query: 126 FVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184
             +   L     T Y     +A    G    V G  G     VI   K    +  +    
Sbjct: 3   LDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGL-AVIMGCKVAGASRIIGVDI 61

Query: 185 STAKLDLLRSLGADLAIDYTKEN-------IEDLPEKFDVVFDAVGQ---CDKALKAVKE 234
           +  K    +  GA   I+    +       IE      D  F+ +G       AL+A  +
Sbjct: 62  NKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK 121

Query: 235 GGRVVSIIG 243
           G  V  ++G
Sbjct: 122 GWGVSVVVG 130

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 51.1 bits (121), Expect = 1e-08
 Identities = 27/121 (22%), Positives = 42/121 (34%), Gaps = 11/121 (9%)

Query: 138 TAYEGL----ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR 193
           TA   +    +        S+LV G  GGVG + + +     G   VA+T +    D L+
Sbjct: 7   TAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNK-RGYDVVASTGNREAADYLK 65

Query: 194 SLGADLAIDYT----KENIEDLPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP 247
            LGA   I               +++    D VG       L  ++ GG V     +   
Sbjct: 66  QLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGG 125

Query: 248 P 248
            
Sbjct: 126 E 126

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 50.1 bits (118), Expect = 3e-08
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 1/119 (0%)

Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
           LS  EAA+ P++  TAY  L+R+    G+ +LV   AG +GT  +Q+A+ +      AA+
Sbjct: 1   LSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS 60

Query: 184 SSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC-DKALKAVKEGGRVVSI 241
                   L     + A               D+V +  G+  +++L  +  GGR+V I
Sbjct: 61  RPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYI 119

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 49.9 bits (118), Expect = 4e-08
 Identities = 31/128 (24%), Positives = 48/128 (37%), Gaps = 9/128 (7%)

Query: 124 LSFVEAASLPLATETAYEGL----ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           L   +A  +  A  TA   +    +         I+V G +GGVG+  + L     G   
Sbjct: 1   LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHK-LGYQV 59

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK--FDVVFDAVG--QCDKALKAVKEG 235
           VA +   +  + L+SLGA   +   +       EK  +    D VG     K L  +  G
Sbjct: 60  VAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYG 119

Query: 236 GRVVSIIG 243
           G V +   
Sbjct: 120 GCVAACGL 127

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.0 bits (118), Expect = 4e-08
 Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 21/170 (12%)

Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
           +    AA L     T Y  L R+    GK + ++ G GG+G+M   ++K   GA     +
Sbjct: 1   IPSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIV-GLGGIGSMGTLISKA-MGAETYVIS 58

Query: 184 SSTAKLDLLRSLGADLAIDYTK--ENIEDLPEKFDVVFDAVG-----QCDKALKAVKEGG 236
            S+ K +    +GAD  I   +  +  E   + FD++            +   KA+K GG
Sbjct: 59  RSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGG 118

Query: 237 RVVSIIGSVTPPASSFV------LTSDGSI------LEKLNPYFESGKVK 274
           R+VSI         S        ++   S       L +L        +K
Sbjct: 119 RIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIK 168

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 49.9 bits (118), Expect = 4e-08
 Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%)

Query: 127 VEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS 185
           +E+  +     T Y     +A  + G +  V G  GGVG   I   K    +  +   + 
Sbjct: 3   LESCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTH 61

Query: 186 TAKLDLLRSLGADLAIDYTKEN-------IEDLPEKFDVVFDAVGQCDKALKAVK 233
             K      LGA   ++    +        E      D   +  G+ +  + A++
Sbjct: 62  KDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQ 116

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 49.1 bits (116), Expect = 6e-08
 Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 7/106 (6%)

Query: 124 LSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA 182
           +       L    +T       +   +   S +   GAG VG   +  AK    +  +A 
Sbjct: 1   VPIELLGPLGCGIQTGAGACINALKVTPASSFVT-WGAGAVGLSALLAAKVCGASIIIAV 59

Query: 183 TSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVG 223
               ++L+L + LGA   I+   ++             +   ++ G
Sbjct: 60  DIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTG 105

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 48.5 bits (114), Expect = 1e-07
 Identities = 34/180 (18%), Positives = 66/180 (36%), Gaps = 32/180 (17%)

Query: 128 EAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186
           EAA+  +A  TA+  L      S G+ +L+    GGVG   + +AK +       A S  
Sbjct: 2   EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA 61

Query: 187 AKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVG--QCDKALKAVKEGGRV 238
            + ++L  LG +   D    +  D           DVV +++      + ++ +  GGR 
Sbjct: 62  KR-EMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRF 120

Query: 239 VSIIGSVTPPASSFVLTSD----------------------GSILEKLNPYFESGKVKAI 276
           + +        +S  L +                         +L+ +  +   GK++ +
Sbjct: 121 IELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL 180

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 48.1 bits (113), Expect = 1e-07
 Identities = 19/138 (13%), Positives = 38/138 (27%), Gaps = 12/138 (8%)

Query: 126 FVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184
                 L     T +     +A    G +  V G        V+           +A   
Sbjct: 3   LDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAK-RIIAVDL 61

Query: 185 STAKLDLLRSLGADLAIDYTKEN-------IEDLPEKFDVVFDAVGQ---CDKALKAVKE 234
           +  K +  +  GA   ++    +        +      D   + VG       AL++  +
Sbjct: 62  NPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK 121

Query: 235 GGRVVSIIGSVTPPASSF 252
           G  V  ++G       + 
Sbjct: 122 GWGVSVLVGWTDLHDVAT 139

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 48.0 bits (113), Expect = 2e-07
 Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 34/170 (20%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           +KA            L+    +       + V I++    +   D  ++   +    +  
Sbjct: 1   IKAVGAYSAK---QPLEPMD-ITRREPGPNDVKIEIAYCGVCHSDLHQVRSEW--AGTVY 54

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV--------------------------YGDINE 94
           P +PG+++ G V  VG QV+K+  GD V                           G  N 
Sbjct: 55  PCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNS 114

Query: 95  KALDHP-KRNGSLAEYTAV-EENLLALKPKNLSFVEAASLPLATETAYEG 142
              D P    G  ++   V E  +L ++  ++  + A  +  A E    G
Sbjct: 115 PTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRG 164

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 46.5 bits (109), Expect = 5e-07
 Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 19/140 (13%)

Query: 125 SFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
           S  E A L PL+         R+    G ++LV  GAG +G + +  AK       V   
Sbjct: 2   SLEEGALLEPLSV--GVHACRRAGVQLGTTVLV-IGAGPIGLVSVLAAKAYGA-FVVCTA 57

Query: 184 SSTAKLDLLRSLGADLAIDYTKENI----------EDLPEKFDVVFDAVG---QCDKALK 230
            S  +L++ ++ GAD+ +                   + +  +V  D  G        + 
Sbjct: 58  RSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGIN 117

Query: 231 AVKEGGRVVSIIGSVTPPAS 250
             + GG ++ ++G  +   +
Sbjct: 118 ITRTGGTLM-LVGMGSQMVT 136

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 46.3 bits (108), Expect = 7e-07
 Identities = 42/170 (24%), Positives = 64/170 (37%), Gaps = 21/170 (12%)

Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
           LSF EAA +  A  T Y+ L+ +    G+ + + G  G     V        G + VA  
Sbjct: 1   LSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYA--KAMGLNVVAVD 58

Query: 184 SSTAKLDLLRSLGADLAIDYT-----KENIEDLPEKFDVVFDAVGQ--CDKALKAVKEGG 236
               KL+L + LGADL ++       K   E +      V  AV +     A  +++ GG
Sbjct: 59  IGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGG 118

Query: 237 RVVSIIGSVTPPASSFV------LTSDGSI------LEKLNPYFESGKVK 274
             V +                  +   GSI      L++   +   GKVK
Sbjct: 119 ACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVK 168

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 9e-07
 Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 12/129 (9%)

Query: 126 FVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184
             +   +     T Y    ++     G + +V G  GGVG  VI   K    +  +    
Sbjct: 4   PEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDL 62

Query: 185 STAKLDLLRSLGADLAIDYTKEN-------IEDLPEKFDVVFDAVGQCDK---ALKAVKE 234
           +  K +   ++GA   I              E         F+ +G  +    AL +   
Sbjct: 63  NKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHM 122

Query: 235 GGRVVSIIG 243
                 ++G
Sbjct: 123 NYGTSVVVG 131

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.8 bits (107), Expect = 1e-06
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 123 NLSFVEAASLPLATETAYEGL-ERSAFSAGK--SILVLGGAGGVGTMVIQLAKH 173
           +LS+   A + +   T+  G+ E+   SAG   +++V G AG  G++  Q+   
Sbjct: 1   HLSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHL 53

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 45.3 bits (106), Expect = 1e-06
 Identities = 27/135 (20%), Positives = 56/135 (41%), Gaps = 15/135 (11%)

Query: 129 AASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187
            A    +  TAY   +      AGK++++ G AG +G   + +A+ +   + +    S  
Sbjct: 6   LAMAMCSGATAYHAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPN 64

Query: 188 KLDLLRSLGADLAIDYTKENIEDLPEK---------FDVVFDAVG---QCDKALKAVKEG 235
           +L L   +GADL ++  + ++E+  +           D + +A G      +  + ++ G
Sbjct: 65  RLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG 124

Query: 236 GRVVSIIGSVTPPAS 250
           G    + G   P   
Sbjct: 125 GFYS-VAGVAVPQDP 138

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 43.9 bits (103), Expect = 3e-06
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 12/92 (13%)

Query: 2  KAWVYKEYGN---SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS 58
          K+W  K++     +QS  + +T VE+P L+  +VL++ +  +++P               
Sbjct: 5  KSWTLKKHFQGKPTQSDFELKT-VELPPLKNGEVLLEALFLSVDPYMRIAS-----KRLK 58

Query: 59 PLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG 90
              + G  VA VVE   S+   F  G  V  
Sbjct: 59 EGAVMMGQQVARVVE---SKNSAFPAGSIVLA 87

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (103), Expect = 4e-06
 Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 12/142 (8%)

Query: 124 LSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA 182
           L F + A++ +   TAY  L  SA   AG+S+LV G +GGVG    Q     +G   +  
Sbjct: 1   LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQ-IARAYGLKILGT 59

Query: 183 TSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAVKE 234
             +     ++   GA    ++ + N  D        +  D++ + +      K L  +  
Sbjct: 60  AGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSH 119

Query: 235 GGRVVSI--IGSVTPPASSFVL 254
           GGRV+ +   G++       + 
Sbjct: 120 GGRVIVVGSRGTIEINPRDTMA 141

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 41.5 bits (96), Expect = 3e-05
 Identities = 22/138 (15%), Positives = 43/138 (31%), Gaps = 12/138 (8%)

Query: 128 EAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186
               +     + Y     +A  + G +  V G  G VG   I   K    +  +A   + 
Sbjct: 5   RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDING 63

Query: 187 AKLDLLRSLGADLAIDYTKEN-------IEDLPEKFDVVFDAVGQCDK---ALKAVKEGG 236
            K    ++LGA   ++  + +        E      D   D  G       A+     G 
Sbjct: 64  EKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGW 123

Query: 237 RVVSIIGSVTPPASSFVL 254
              +++G+     +   +
Sbjct: 124 GSCTVVGAKVDEMTIPTV 141

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 38.9 bits (89), Expect = 2e-04
 Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)

Query: 129 AASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187
             ++ +   TAY GL        G+++LV   AG VG++V Q+AK   G   V A  S  
Sbjct: 7   LGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKL-KGCKVVGAAGSDE 65

Query: 188 KLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAVKEGGRVV 239
           K+  L+ +G D A +Y   N  +       P+ +D  FD VG    +  L  +K+ G++ 
Sbjct: 66  KIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIA 125

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 38.5 bits (88), Expect = 5e-04
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 148 FSAGKSILVLGGAGGVG-TMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLA 200
           +    ++LV GG GGVG  +   LA+   GA  +   S S    D    L A+L 
Sbjct: 6   WKPTGTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAELE 58

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 36.0 bits (83), Expect = 0.003
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 6/79 (7%)

Query: 150 AGKSILVLGGAGGVG-TMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKEN 207
           AGK +LV GGA G+G  +    A+   GA            ++  ++G     +D   E 
Sbjct: 4   AGKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEGKEVAEAIGGAFFQVDLEDE- 60

Query: 208 IEDLPEKFDVVFDAVGQCD 226
             +     +    A+G+ D
Sbjct: 61  -RERVRFVEEAAYALGRVD 78

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 13/77 (16%)

Query: 151 GKSILVLGGAGGVG-TMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209
            K +LVL  + G+G  +   L++   GA +V   +     +LL+  G           + 
Sbjct: 4   DKGVLVLAASRGIGRAVADVLSQE--GA-EVTICARNE--ELLKRSGHRYV-------VC 51

Query: 210 DLPEKFDVVFDAVGQCD 226
           DL +  D++F+ V + D
Sbjct: 52  DLRKDLDLLFEKVKEVD 68

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 36.3 bits (82), Expect = 0.003
 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 4/77 (5%)

Query: 143 LERSAFSAGKSILVLGGAGGVGT-MVIQLAKHVFGASKVAATSSTAKLD-LLRSLGADLA 200
           ++ +    G  +LV G  G V + +V QL +H  G        S +KL  L +   A   
Sbjct: 3   IDNAVLPEGSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAKYP 60

Query: 201 IDYTKENIEDLPEKFDV 217
             +    +ED+ ++   
Sbjct: 61  GRFETAVVEDMLKQGAY 77

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	284
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.97
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.97
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.96
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.96
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.96
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.95
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.95
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.95
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.95
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.95
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.94
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.94
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.94
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.93
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.93
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.93
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.93
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.92
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.92
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.92
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.91
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.9
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.9
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.9
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.89
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.88
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.88
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.88
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.88
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.87
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.87
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.87
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.87
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.87
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.87
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.86
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.85
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.85
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.85
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.84
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.84
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.83
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.83
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.82
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.81
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.79
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.77
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.77
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.71
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.67
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.67
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.46
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.15
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.05
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.99
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.9
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.74
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.73
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.57
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.55
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	97.51
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.51
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.51
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.5
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.48
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.45
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.44
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	97.44
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.42
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.4
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.37
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.33
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.33
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.3
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.3
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.27
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.27
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.26
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.24
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.23
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.22
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.19
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.19
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.18
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	97.17
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.16
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.14
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.14
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.12
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.11
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.09
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.09
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.08
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.08
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.07
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.05
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	97.04
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.04
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.04
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.03
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.02
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.02
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.01
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.01
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.0
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.95
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.95
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.95
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.93
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.93
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.92
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.89
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.89
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.88
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.87
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.84
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.82
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.81
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.77
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.75
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.72
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.71
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.7
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.7
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.67
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.66
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.64
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	96.63
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	96.63
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.62
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.55
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	96.49
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.49
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.46
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.4
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.37
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	96.36
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.35
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	96.33
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.31
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.29
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.29
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.29
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.28
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.21
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.19
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.18
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	96.13
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	96.12
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	96.04
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.97
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	95.97
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	95.9
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	95.87
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.87
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	95.78
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.75
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.7
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	95.66
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.62
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.6
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.58
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.57
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.51
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.4
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	95.33
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.27
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.26
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.25
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	95.24
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	95.09
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.08
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	95.04
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	95.04
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	95.02
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	95.02
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	94.97
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.95
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	94.94
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	94.92
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.88
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.85
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.85
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.72
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	94.65
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	94.62
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	94.46
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.4
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.34
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.32
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	94.31
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	94.31
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	94.23
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.17
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.11
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	94.07
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.03
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	93.99
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	93.95
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	93.86
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	93.83
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	93.76
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	93.68
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	93.6
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.57
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.5
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.49
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.49
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.4
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	93.38
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.38
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.36
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.35
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.28
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.26
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	93.21
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	93.08
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.06
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.98
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	92.97
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	92.96
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	92.93
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.8
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.7
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	92.65
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.58
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	92.47
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	92.44
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	92.4
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	92.32
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	92.24
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	92.14
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	92.12
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	92.09
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.03
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	91.99
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	91.96
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	91.93
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.74
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.69
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	91.66
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	91.65
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.64
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.49
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	91.43
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	91.4
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.32
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	91.32
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	91.22
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	91.15
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.15
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.07
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.87
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	90.83
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.8
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	90.79
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	90.74
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	90.65
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	90.63
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	90.51
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	90.49
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	90.46
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	90.37
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	90.34
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.06
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	89.94
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	89.93
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	89.57
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	89.47
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	89.22
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	89.05
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	88.98
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	88.93
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	88.9
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	88.71
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	88.69
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	88.59
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	88.53
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	88.41
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	88.33
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	88.17
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	88.11
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.1
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	87.74
d1jsxa_	207	Glucose-inhibited division protein B (GidB) {Esche	87.69
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	87.66
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	87.64
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	87.56
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.42
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	87.4
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	87.32
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	87.17
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	87.09
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	87.07
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	87.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	86.76
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	86.69
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	86.59
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	86.48
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	86.47
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	86.41
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	86.4
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	86.39
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	86.38
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	86.32
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	86.32
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	86.26
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	86.1
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	86.04
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	86.01
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	85.96
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	85.93
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	85.89
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	85.76
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	85.72
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	85.6
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	85.59
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	85.58
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	85.4
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	84.86
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	84.86
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	84.59
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	84.55
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	84.51
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	84.46
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	84.45
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	84.35
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	84.28
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	83.75
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	83.52
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	83.52
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	83.49
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	83.47
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	83.31
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	82.68
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	82.66
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	82.64
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	82.53
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	82.48
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	82.39
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	82.36
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	82.33
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	82.27
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	82.2
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	82.08
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	82.04
d1xdza_	239	Glucose-inhibited division protein B (GidB) {Bacil	82.03
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	81.9
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	81.88
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	81.78
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.56
d1fp1d2	244	Chalcone O-methyltransferase {Alfalfa (Medicago sa	81.45
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.4
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	81.36
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	81.29
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	81.24
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	81.18
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	81.16
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	80.97
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	80.92
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	80.54
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	80.54
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	80.46
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	80.43
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	80.27
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	80.24
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	80.21

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5e-31  Score=203.60  Aligned_cols=147  Identities=35%  Similarity=0.522  Sum_probs=132.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||++++++|++ +.++++.+.+.|+|++|||+|||.++++|++|++.++|.++. ...+|.++|||++|+|+++|++++
T Consensus         3 MkAv~~~~~G~p-~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~~p~i~G~e~~G~V~~vG~~v~   80 (150)
T d1yb5a1           3 MRAVRVFEFGGP-EVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLLPYTPGSDVAGVIEAVGDNAS   80 (150)
T ss_dssp             EEEEEESSCSSG-GGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC-CCCSSBCCCSCEEEEEEEECTTCT
T ss_pred             eeEEEEEccCCc-ceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCc-cccccccCccceeeeeEeecceee
Confidence            999999999988 788886467899999999999999999999999999997653 346788999999999999999999


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEE
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVL  157 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~  157 (284)
                      +|++||||++..        ...|+|+||++++++.++++|++++++++|+++++..|+|+++ ..+....|+++||+
T Consensus        81 ~~~vGdrV~~~~--------~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          81 AFKKGDRVFTSS--------TISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             TCCTTCEEEESC--------CSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             ccccCccccccc--------cccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            999999999865        2469999999999999999999999999999999999999987 56788999999874

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.97  E-value=7.5e-31  Score=208.64  Aligned_cols=156  Identities=22%  Similarity=0.274  Sum_probs=132.2

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCC-CCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      |.++++.++++    ++++ +.|.|+|+++||+||+++++||++|++.+.+.. +....+.|.++|||++|+|+++|+++
T Consensus         2 ~maAVl~g~~~----l~~~-e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v   76 (178)
T d1e3ja1           2 NLSAVLYKQND----LRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNV   76 (178)
T ss_dssp             CEEEEEEETTE----EEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTC
T ss_pred             ceEEEEEcCCc----EEEE-EeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCccc
Confidence            34556666665    6999 899999999999999999999999999887643 33445678999999999999999999


Q ss_pred             CCCCCCCEEEEecCcc-------------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHH
Q 023273           80 KKFKVGDEVYGDINEK-------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY  140 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~-------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  140 (284)
                      ++|++||||+..+...                   .......+|+|+||+++|++.++++|+++++++++.+++++.|+|
T Consensus        77 ~~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~  156 (178)
T d1e3ja1          77 KHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTV  156 (178)
T ss_dssp             CSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHH
T ss_pred             CCCCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHH
Confidence            9999999998754210                   011234579999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCCCEEEEEcCCc
Q 023273          141 EGLERSAFSAGKSILVLGGAG  161 (284)
Q Consensus       141 ~al~~~~~~~g~~vlI~ga~g  161 (284)
                      ++++.+++++|++|+|+|++.
T Consensus       157 ~a~~~~~~~~g~~VlVig~C~  177 (178)
T d1e3ja1         157 DAFEAARKKADNTIKVMISCR  177 (178)
T ss_dssp             HHHHHHHHCCTTCSEEEEECC
T ss_pred             HHHHHhCCCCCCEEEEEcccc
Confidence            999999999999999999763

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=1.4e-29  Score=200.72  Aligned_cols=151  Identities=30%  Similarity=0.412  Sum_probs=130.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||++++++|++   ++++ +.|.|+|++|||+|||.+++||++|++.++|.++ ....+|.++|||++|+|+++|++++
T Consensus         6 MkA~v~~~~g~p---l~l~-evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~-~~~~~P~i~GhE~~G~V~~~G~~v~   80 (175)
T d1llua1           6 MKAAVVHAYGAP---LRIE-EVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWP-VKPPLPFIPGHEGVGYVAAVGSGVT   80 (175)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSS-SCCCSSBCCCSCEEEEEEEECTTCC
T ss_pred             cEEEEEEeCCCC---CEEE-EeECCCCCCCEEEEEEEEecCcccchhhhccCcc-ccccCCcCCCCcceEEEEEeCCCcc
Confidence            899999999987   7999 8999999999999999999999999999999875 3346889999999999999999999


Q ss_pred             CCCCCCEEEEecC-------------------ccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           81 KFKVGDEVYGDIN-------------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        81 ~~~~Gd~V~~~~~-------------------~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      ++++||||+..+.                   +....+...+|+|+||++++++.++++|++++.+.++++..++.|+++
T Consensus        81 ~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t~~~  160 (175)
T d1llua1          81 RVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILD  160 (175)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHHHHH
T ss_pred             ccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHHhHHHHHHH
Confidence            9999999976421                   111234556799999999999999999999998888888888889998


Q ss_pred             HHHhcccCCCCEEEEE
Q 023273          142 GLERSAFSAGKSILVL  157 (284)
Q Consensus       142 al~~~~~~~g~~vlI~  157 (284)
                      .++... .+|++|||+
T Consensus       161 ~~~~g~-~~G~~VLVl  175 (175)
T d1llua1         161 QMRAGQ-IEGRIVLEM  175 (175)
T ss_dssp             HHHTTC-CSSEEEEEC
T ss_pred             HHHhCC-CCCCEEEeC
Confidence            886554 469999984

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.96  E-value=2.9e-29  Score=197.87  Aligned_cols=150  Identities=22%  Similarity=0.346  Sum_probs=130.5

Q ss_pred             eEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCCCCC-CCCCCCcccccceeEEEEEeCCCC
Q 023273            2 KAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         2 ~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      ||+++.++|++   ++++ +.+.|++ ++|||+||+.+++||++|++.+.|.++. ....+|.++|||++|+|+++|+++
T Consensus         1 kA~~~~~~g~p---l~i~-~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v   76 (171)
T d1h2ba1           1 KAARLHEYNKP---LRIE-DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGV   76 (171)
T ss_dssp             CEEEESSTTSC---CEEE-CCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTC
T ss_pred             CEEEEEeCCCC---CEEE-EeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCC
Confidence            79999999988   8999 8999986 6899999999999999999999887542 223678999999999999999999


Q ss_pred             CCCCCCCEEEEecCcc------------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           80 KKFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      +++++||||+..+...                  ...+...+|+|+||+++|.+.++++|++++++.++++.+++.|+|+
T Consensus        77 ~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~  156 (171)
T d1h2ba1          77 EGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLE  156 (171)
T ss_dssp             CSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHH
T ss_pred             CcCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHH
Confidence            9999999998765311                  1233456799999999999999999999999888888899999999


Q ss_pred             HHHhcccCCCCEEEE
Q 023273          142 GLERSAFSAGKSILV  156 (284)
Q Consensus       142 al~~~~~~~g~~vlI  156 (284)
                      +++.+++ .|++|||
T Consensus       157 al~~~~~-~G~~VlI  170 (171)
T d1h2ba1         157 RLEKGEV-LGRAVLI  170 (171)
T ss_dssp             HHHTTCC-SSEEEEE
T ss_pred             HHHhcCC-CCCEEEe
Confidence            9988887 8999997

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=7.9e-29  Score=195.68  Aligned_cols=150  Identities=27%  Similarity=0.431  Sum_probs=124.2

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++++++++   ++++ +.+.|+|++|||+|||++++||++|++.+++... ....+|.++|||++|+|+++|++++
T Consensus         1 MkA~v~~~~g~p---l~i~-~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~-~~~~~p~v~GhE~~G~Vv~vG~~v~   75 (171)
T d1rjwa1           1 MKAAVVEQFKEP---LKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP-VKPKLPLIPGHEGVGIVEEVGPGVT   75 (171)
T ss_dssp             CEEEEBSSTTSC---CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS-SCCCSSBCCCSCEEEEEEEECTTCC
T ss_pred             CeEEEEecCCCC---cEEE-EeECCCCCCCeEEEEEEEeeccccceeeeecccc-cccccccccCCEEEEEEEEeccccc
Confidence            999999999987   8999 8999999999999999999999999998877543 3346789999999999999999999


Q ss_pred             CCCCCCEEEEecC-------------------ccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273           81 KFKVGDEVYGDIN-------------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (284)
Q Consensus        81 ~~~~Gd~V~~~~~-------------------~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (284)
                      ++++||||+..+.                   .....+...+|+|+||+++|+++++++|++++++.+ ++. ...++++
T Consensus        76 ~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A-~l~-~~~~~~~  153 (171)
T d1rjwa1          76 HLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQ-PLE-KINEVFD  153 (171)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEE-EGG-GHHHHHH
T ss_pred             CceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHH-HHH-HHHHHHH
Confidence            9999999976431                   111234456799999999999999999999987544 443 3456777


Q ss_pred             HHHhcccCCCCEEEEEc
Q 023273          142 GLERSAFSAGKSILVLG  158 (284)
Q Consensus       142 al~~~~~~~g~~vlI~g  158 (284)
                      ++..+.+ +|++|||+|
T Consensus       154 ~~~~~~~-~G~tVlViG  169 (171)
T d1rjwa1         154 RMLKGQI-NGRVVLTLE  169 (171)
T ss_dssp             HHHTTCC-SSEEEEECC
T ss_pred             HHHhcCC-CCCEEEEeC
Confidence            7766555 599999998

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=6.1e-28  Score=185.64  Aligned_cols=143  Identities=24%  Similarity=0.317  Sum_probs=125.1

Q ss_pred             eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (284)
Q Consensus         2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   81 (284)
                      +.+.|.++|.+ +.|+++ +.+.|+|++|||+|||.++++|++|++.+.|.++  ...+|.++|||++|+|+++|+++++
T Consensus         2 ~~i~~~~~G~p-e~l~~~-e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~--~~~~p~~~G~e~~G~V~~vG~~v~~   77 (147)
T d1qora1           2 TRIEFHKHGGP-EVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGLYP--PPSLPSGLGTEAAGIVSKVGSGVKH   77 (147)
T ss_dssp             EEEEBSSCCSG-GGCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC--CSSSSBCCCSCEEEEEEEECTTCCS
T ss_pred             eEEEEcccCCC-ceeEEE-EecCCCCCCCEEEEEEEEecccceeeeeecCCCC--CCcceeeeccccccceeeeeeeccc
Confidence            46788999998 889999 8999999999999999999999999999999874  3467899999999999999999999


Q ss_pred             CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHh--hhcccchHHHHHHHHHhcccCCCCEEEE
Q 023273           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVE--AASLPLATETAYEGLERSAFSAGKSILV  156 (284)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~--aa~~~~~~~ta~~al~~~~~~~g~~vlI  156 (284)
                      |++||||+...        ...|+|++|.+++.+.++++|+++++++  +++++....|+++++...++++|++|||
T Consensus        78 ~~vGdrV~~~~--------~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~~~~~~G~~VLI  146 (147)
T d1qora1          78 IKAGDRVVYAQ--------SALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI  146 (147)
T ss_dssp             CCTTCEEEESC--------CSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEE
T ss_pred             ccccceeeeec--------cccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEe
Confidence            99999997643        2368999999999999999999987754  4455677778888886678999999997

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.95  E-value=2.4e-28  Score=197.29  Aligned_cols=151  Identities=21%  Similarity=0.296  Sum_probs=129.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++++++.+   ++++ +.+.|+|++|||+|||.++|||++|++.+.|...  ...+|.++|||++|+|+++|+++.
T Consensus         9 ~kAav~~~~~~p---l~i~-ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~--~~~~p~i~GhE~~G~v~~vG~~v~   82 (199)
T d1cdoa1           9 CKAAVAWEANKP---LVIE-EIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKH--KDGFPVVLGHEGAGIVESVGPGVT   82 (199)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCC--TTSCSEECCCCEEEEEEEECTTCC
T ss_pred             EEEEEEecCCCC---cEEE-EEECCCCCCCEEEEEEEEEEEecchhhhhhhccc--ccccccccccccceEEEEEcCCCc
Confidence            469999999987   8999 8999999999999999999999999999988653  346789999999999999999999


Q ss_pred             CCCCCCEEEEecCcccc-------------------C--------------------CCCCCCceeeEEeeecCceeeCC
Q 023273           81 KFKVGDEVYGDINEKAL-------------------D--------------------HPKRNGSLAEYTAVEENLLALKP  121 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~-------------------~--------------------~~~~~g~~~~~~~~~~~~~~~ip  121 (284)
                      +|++||||+..+.....                   .                    +...+|+|+||+++|++.++++|
T Consensus        83 ~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP  162 (199)
T d1cdoa1          83 EFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKID  162 (199)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECC
T ss_pred             eecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECC
Confidence            99999999776421100                   0                    00014999999999999999999


Q ss_pred             CCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEE
Q 023273          122 KNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVL  157 (284)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~  157 (284)
                      ++++++++|++.+++.|++.++. ....+.|++|||+
T Consensus       163 ~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         163 PSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             TTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999999999999999999995 4677899999984

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.1e-28  Score=193.15  Aligned_cols=153  Identities=24%  Similarity=0.307  Sum_probs=126.1

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCC-CCCCCCCCcccccceeEEEEEeCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQV   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~~   79 (284)
                      |+|++++++++    ++++ +.+.|+|++|||+|||.+++||++|++.+++.. +....++|.++|||++|+|+++|+++
T Consensus         8 ~~a~V~~gp~~----l~l~-evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v   82 (185)
T d1pl8a1           8 NLSLVVHGPGD----LRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSV   82 (185)
T ss_dssp             CEEEEEEETTE----EEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTC
T ss_pred             CEEEEEeCCCe----EEEE-EeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccce
Confidence            68999999876    6999 899999999999999999999999999987542 22345678999999999999999999


Q ss_pred             CCCCCCCEEEEecCcc-------------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHH
Q 023273           80 KKFKVGDEVYGDINEK-------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY  140 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~~~-------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  140 (284)
                      ++|++||||+..+...                   .......+|+|+||++++.++++++|+++++++++++++.  +|+
T Consensus        83 ~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~pl~--~a~  160 (185)
T d1pl8a1          83 KHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPLE--KAL  160 (185)
T ss_dssp             CSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEEGG--GHH
T ss_pred             eeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHHHHH--HHH
Confidence            9999999998754210                   0112345789999999999999999999998887766543  577


Q ss_pred             HHHHhcccCCCCEEEEEcCCch
Q 023273          141 EGLERSAFSAGKSILVLGGAGG  162 (284)
Q Consensus       141 ~al~~~~~~~g~~vlI~ga~g~  162 (284)
                      ++++..+.++|++|+| | +|+
T Consensus       161 ~a~~~~~~~~G~~VlI-g-~GP  180 (185)
T d1pl8a1         161 EAFETFKKGLGLKIML-K-CDP  180 (185)
T ss_dssp             HHHHHHHTTCCSEEEE-E-CCT
T ss_pred             HHHHHhCCCCCCEEEE-E-eCC
Confidence            7788888899999988 5 454

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=5.9e-28  Score=193.30  Aligned_cols=153  Identities=18%  Similarity=0.238  Sum_probs=126.6

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC-
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV-   79 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~-   79 (284)
                      ||++++..++.. ..+++. +.+.++++++||+|||.++|||++|++.+.|.++  ..++|+++|||++|+|+++|+++ 
T Consensus         7 ~ka~~~~~~~~~-~~~~~~-~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~--~~~~P~i~GHE~~G~Vv~vG~~v~   82 (192)
T d1piwa1           7 FEGIAIQSHEDW-KNPKKT-KYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG--NMKMPLVVGHEIVGKVVKLGPKSN   82 (192)
T ss_dssp             EEEEEECCSSST-TSCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTS--CCCSSEECCCCEEEEEEEECTTCC
T ss_pred             eEEEEEeCCCcC-CcceEe-eccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCC--CCCCCcCcccccccchhhcccccc
Confidence            799999999887 567777 6666778999999999999999999999998764  34678999999999999999987 


Q ss_pred             CCCCCCCEEEEecC-----cc---------------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhccc
Q 023273           80 KKFKVGDEVYGDIN-----EK---------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLP  133 (284)
Q Consensus        80 ~~~~~Gd~V~~~~~-----~~---------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  133 (284)
                      +.+++||||...+.     .+                     ...+...+|+|++|+++|++.++++|++++++.|+.+.
T Consensus        83 ~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal~~  162 (192)
T d1piwa1          83 SGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGE  162 (192)
T ss_dssp             SSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEESSH
T ss_pred             cccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHHHHH
Confidence            66999999964321     00                     01134467999999999999999999999987765555


Q ss_pred             chHHHHHHHHHhcccCCCCEEEEE
Q 023273          134 LATETAYEGLERSAFSAGKSILVL  157 (284)
Q Consensus       134 ~~~~ta~~al~~~~~~~g~~vlI~  157 (284)
                      ..+.|||++++.++++++++|++.
T Consensus       163 ~~~~ta~~~l~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         163 AGVHEAFERMEKGDVRYRFTLVGY  186 (192)
T ss_dssp             HHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEE
Confidence            456799999999999999999874

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=5.6e-28  Score=194.53  Aligned_cols=151  Identities=27%  Similarity=0.301  Sum_probs=128.9

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.++|++   ++++ +.|.|+|++|||+|||.++|||++|++.++|.++  ..++|.++|||++|+|+++|+++.
T Consensus         7 ~kAav~~~~g~~---l~i~-evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~--~~~~p~v~GhE~~G~V~~vG~~V~   80 (197)
T d2fzwa1           7 CKAAVAWEAGKP---LSIE-EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP--EGCFPVILGHLGAGIVESVGEGVT   80 (197)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT--TCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             EEEEEEccCCCC---CEEE-EEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcc--cccccccCCcceeeEEEeecCCce
Confidence            799999999998   8999 8999999999999999999999999999999753  346799999999999999999999


Q ss_pred             CCCCCCEEEEecCccc---------------------------------------cCCCCCCCceeeEEeeecCceeeCC
Q 023273           81 KFKVGDEVYGDINEKA---------------------------------------LDHPKRNGSLAEYTAVEENLLALKP  121 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~---------------------------------------~~~~~~~g~~~~~~~~~~~~~~~ip  121 (284)
                      .+++||||...+....                                       ..+...+|+|+||+++|+..++++|
T Consensus        81 ~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp  160 (197)
T d2fzwa1          81 KLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKID  160 (197)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             ecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECC
Confidence            9999999977532100                                       0011124899999999999999999


Q ss_pred             CCCCHHhhhcccchHHHHHHHHHhc-ccCCCCEEEEE
Q 023273          122 KNLSFVEAASLPLATETAYEGLERS-AFSAGKSILVL  157 (284)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al~~~-~~~~g~~vlI~  157 (284)
                      ++++.+++|.+.+++.|++.++... .-+.+++|||+
T Consensus       161 ~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         161 PLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             TTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            9999999999999999999998543 34678888874

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=7.6e-28  Score=180.79  Aligned_cols=131  Identities=33%  Similarity=0.445  Sum_probs=117.4

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||++++++|++   ++++ +.+.|+|++|||+||+.+++||++|++.++|.++. ...+|+++|||++|+|        
T Consensus         1 MkA~~~~~~G~~---l~~~-e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~-~~~~P~v~G~E~~G~V--------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGP---LELV-DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT-RLHPPFIPGMEVVGVV--------   67 (131)
T ss_dssp             CEEEEECSTTSC---EEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS-CCCSSBCCCCEEEEEE--------
T ss_pred             CcEEEEccCCCC---CEEE-EccCCCCCCCEEEEEEEEEeccccccccccccccc-cccceeEeeeeeEEee--------
Confidence            999999999987   8998 89999999999999999999999999999998753 3468899999999999        


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEE
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVL  157 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~  157 (284)
                         +||+|++...         +|+|++|++++++.++++|++++++++|++++++.|||+++... ...|++||++
T Consensus        68 ---vGd~V~~~~~---------~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~-g~~g~tvl~l  131 (131)
T d1iz0a1          68 ---EGRRYAALVP---------QGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDR-GHTGKVVVRL  131 (131)
T ss_dssp             ---TTEEEEEECS---------SCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCT-TCCBEEEEEC
T ss_pred             ---ccceEEEEec---------cCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhc-ccCCCEEEEC
Confidence               3999998764         69999999999999999999999999999999999999999432 2569998863

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.95  E-value=1.3e-27  Score=189.52  Aligned_cols=150  Identities=27%  Similarity=0.339  Sum_probs=122.9

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC------CCCCCCcccccceeEEEEE
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA------TDSPLPTIPGYDVAGVVEK   74 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~------~~~~~p~~~G~e~~G~V~~   74 (284)
                      |||+++.++|++   ++++ +.+.|+|++|||+||+.+++||++|++.++|.++.      ...++|+++|||++|+|++
T Consensus         1 MKA~~~~~~G~p---l~i~-dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~   76 (177)
T d1jvba1           1 MRAVRLVEIGKP---LSLQ-EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEE   76 (177)
T ss_dssp             CEEEEECSTTSC---CEEE-ECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEE
T ss_pred             CeEEEEEeCCCC---CEEE-EeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEee
Confidence            999999999987   8999 89999999999999999999999999999987542      2347899999999999999


Q ss_pred             eCCCCCCCCCCCEEEEecCc------------------cccCCCCCCCceeeEEeeecCc-eeeCCCCCCHHhhhcc-cc
Q 023273           75 VGSQVKKFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENL-LALKPKNLSFVEAASL-PL  134 (284)
Q Consensus        75 vG~~~~~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~-~~~ip~~~~~~~aa~~-~~  134 (284)
                      +|+++++|++||||+..+..                  ....+...+|+|+||++++... ++++|+..+ .+++++ ..
T Consensus        77 ~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~-~~~a~~~~~  155 (177)
T d1jvba1          77 VGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKP-MITKTMKLE  155 (177)
T ss_dssp             ECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCC-CCEEEEEGG
T ss_pred             eccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCCh-HHHHHHHHH
Confidence            99999999999999875421                  1123445679999999997655 556665544 455544 56


Q ss_pred             hHHHHHHHHHhcccCCCCEEEE
Q 023273          135 ATETAYEGLERSAFSAGKSILV  156 (284)
Q Consensus       135 ~~~ta~~al~~~~~~~g~~vlI  156 (284)
                      ++.+++++++..+. .|++|||
T Consensus       156 ~~~~a~~~~~~~~~-~G~~VlI  176 (177)
T d1jvba1         156 EANEAIDNLENFKA-IGRQVLI  176 (177)
T ss_dssp             GHHHHHHHHHTTCC-CSEEEEE
T ss_pred             HHHHHHHHHHhhcc-cCCceEC
Confidence            88899999988777 5899987

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=5.8e-28  Score=195.62  Aligned_cols=149  Identities=28%  Similarity=0.338  Sum_probs=126.2

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++++++++   ++++ +.|.|+|+++||+|||.++|||++|++.++|.++   ..+|.++|||++|+|+++|++++
T Consensus         9 ~KAaV~~~~g~p---l~i~-evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~---~~~P~v~GHE~~G~V~~vG~~V~   81 (202)
T d1e3ia1           9 CKAAIAWKTGSP---LCIE-EIEVSPPKACEVRIQVIATCVCPTDINATDPKKK---ALFPVVLGHECAGIVESVGPGVT   81 (202)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC---CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             EEEEEEccCCCC---CEEE-EEECCCCCCCEEEEEEEEEEEeccccceeeeecc---cccccccccccceEEeeecCCce
Confidence            799999999987   8999 8999999999999999999999999999999764   46789999999999999999999


Q ss_pred             CCCCCCEEEEecCccc------------------c-------------------------CCCCCCCceeeEEeeecCce
Q 023273           81 KFKVGDEVYGDINEKA------------------L-------------------------DHPKRNGSLAEYTAVEENLL  117 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~------------------~-------------------------~~~~~~g~~~~~~~~~~~~~  117 (284)
                      ++++||||+..+....                  .                         .+....|+|+||+++|+..+
T Consensus        82 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l  161 (202)
T d1e3ia1          82 NFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL  161 (202)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             eccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhE
Confidence            9999999987542100                  0                         00112489999999999999


Q ss_pred             eeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEc
Q 023273          118 ALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG  158 (284)
Q Consensus       118 ~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g  158 (284)
                      +++|++++++.++++.+++.+++.++..  +++|++|.|+.
T Consensus       162 ~~lP~~~~~~~~~~~~~~~~~~~~a~~~--~k~G~~V~vi~  200 (202)
T d1e3ia1         162 ARVDDEFDLDLLVTHALPFESINDAIDL--MKEGKSIRTIL  200 (202)
T ss_dssp             EECCTTSCGGGGEEEEEEGGGHHHHHHH--HHTTCCSEEEE
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHHHh--CCCCCEEEEEE
Confidence            9999999998888888888788877754  46788887764

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=4.2e-27  Score=181.88  Aligned_cols=148  Identities=26%  Similarity=0.325  Sum_probs=125.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||++++.++++ ..++++ +.+.|+|++|||+|||.++|||++|.+.+.|.++. ....|.++|+|++|+|++  +.++
T Consensus         4 ~KA~v~~~~~~~-~~~~i~-~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~-~~~~p~v~g~e~~G~v~~--~~~~   78 (152)
T d1xa0a1           4 FQAFVVNKTETE-FTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKI-VKTYPFVPGIDLAGVVVS--SQHP   78 (152)
T ss_dssp             EEEEEEEEETTE-EEEEEE-EEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSS-CCSSSBCCCSEEEEEEEE--CCSS
T ss_pred             eEEEEEEecCCc-eEEEEE-EccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccc-cccccceeeeeeeeeeec--cCCC
Confidence            799999999987 457788 89999999999999999999999999998887643 246789999999999998  6678


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEc
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLG  158 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g  158 (284)
                      .|++||+|++......   ...+|+|+||+.+|++.++++|++++ .++|+++++..|++.++ ...+++ |++||++|
T Consensus        79 ~~~~g~~v~~~~~~~~---~~~~G~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1          79 RFREGDEVIATGYEIG---VTHFGGYSEYARLHGEWLVPLPKGLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             SCCTTCEEEEESTTBT---TTBCCSSBSEEEECGGGCEECCTTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             ccccCCEEEEecCccc---cccCCCcceeeeehhhccccCCCCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            8999999998754322   23469999999999999999999997 57788888888888777 556665 99999975

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.94  E-value=1.2e-26  Score=186.21  Aligned_cols=149  Identities=21%  Similarity=0.310  Sum_probs=123.0

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |+|+++++.+++   |+++ +.+.|+|++|||+||+.+++||++|++.+.|.++   .++|.++|||++|+|+++|++++
T Consensus         4 ~~Aav~~~~g~~---l~l~-~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~---~~~P~i~GHE~~G~V~~vG~~v~   76 (194)
T d1f8fa1           4 IIAAVTPCKGAD---FELQ-ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP---VPLPAVLGHEGSGIIEAIGPNVT   76 (194)
T ss_dssp             EEEEEBCSTTCC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC---CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             eEEEEEcCCCCC---cEEE-EeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc---ccCCcccccceEEEeeecCccce
Confidence            789999999987   8999 8999999999999999999999999999999864   46899999999999999999999


Q ss_pred             CCCCCCEEEEecCccc--------------------cCC--------------------CCCCCceeeEEeeecCceeeC
Q 023273           81 KFKVGDEVYGDINEKA--------------------LDH--------------------PKRNGSLAEYTAVEENLLALK  120 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~--------------------~~~--------------------~~~~g~~~~~~~~~~~~~~~i  120 (284)
                      +|++||||+..+..+.                    ..+                    ....|+|+||.+++...++++
T Consensus        77 ~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~i  156 (194)
T d1f8fa1          77 ELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKV  156 (194)
T ss_dssp             SCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEE
T ss_pred             eEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEEC
Confidence            9999999965431100                    000                    001378999999999999999


Q ss_pred             CCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEE
Q 023273          121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA  182 (284)
Q Consensus       121 p~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~  182 (284)
                      |++++++++                        +++.| +|++|++++++++.+ +...++.
T Consensus       157 p~~i~~~~~------------------------~~i~g-~g~~g~~aiq~a~~~-g~~~iia  192 (194)
T d1f8fa1         157 TKDFPFDQL------------------------VKFYA-FDEINQAAIDSRKGI-TLKPIIK  192 (194)
T ss_dssp             CTTCCGGGG------------------------EEEEE-GGGHHHHHHHHHHTS-CSEEEEE
T ss_pred             CCCCCcccE------------------------EEEeC-cHHHHHHHHHHHHHc-CCCEEEE
Confidence            998876543                        34445 899999999999996 7665554

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=1.7e-26  Score=183.32  Aligned_cols=146  Identities=18%  Similarity=0.284  Sum_probs=121.1

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++++++++   ++++ +.+.|+|++|||+|+|.++|||++|++.++|.++  ..++|+++|||++|+|+++|+++.
T Consensus         5 ~kA~v~~~~~~p---l~i~-ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~--~~~~P~vlGHE~~G~V~~vG~~v~   78 (184)
T d1vj0a1           5 AHAMVLEKFNQP---LVYK-EFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP--RVPLPIILGHEGAGRVVEVNGEKR   78 (184)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT--TCCSSBCCCCEEEEEEEEESSCCB
T ss_pred             EEEEEEecCCCC---cEEE-EeeCCCCCCCEEEEEEEEECCCCCchhheeccCC--ccccccccceeeeeeeeEEecccc
Confidence            789999999987   8999 8999999999999999999999999999999864  346899999999999999999885


Q ss_pred             -----CCCCCCEEEEecCc-------------------cccCC--------CCCCCceeeEEeee-cCceeeCCCCCCHH
Q 023273           81 -----KFKVGDEVYGDINE-------------------KALDH--------PKRNGSLAEYTAVE-ENLLALKPKNLSFV  127 (284)
Q Consensus        81 -----~~~~Gd~V~~~~~~-------------------~~~~~--------~~~~g~~~~~~~~~-~~~~~~ip~~~~~~  127 (284)
                           .+++||+|+..+..                   ....+        ...+|+|+||++++ .+.++++|++++.+
T Consensus        79 ~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~~  158 (184)
T d1vj0a1          79 DLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHR  158 (184)
T ss_dssp             CTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCEE
T ss_pred             ccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCHH
Confidence                 46899999875321                   00111        23479999999985 67999999999854


Q ss_pred             hhhcccchHHHHHHHHHhcccCCCCEEEEEc
Q 023273          128 EAASLPLATETAYEGLERSAFSAGKSILVLG  158 (284)
Q Consensus       128 ~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g  158 (284)
                      +      ++.+|+++++.+++++|++|+|..
T Consensus       159 ~------pl~~A~~a~~~~~~~~G~~VlI~~  183 (184)
T d1vj0a1         159 L------PLKEANKALELMESREALKVILYP  183 (184)
T ss_dssp             E------EGGGHHHHHHHHHHTSCSCEEEEC
T ss_pred             H------HHHHHHHHHHHhCCCcCCEEEEee
Confidence            2      233588889999999999999974

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.93  E-value=6.6e-26  Score=182.77  Aligned_cols=149  Identities=28%  Similarity=0.362  Sum_probs=118.9

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++++++++   ++++ +.+.|+|++|||+|||.++|||++|++.+.|.++   .++|.++|||++|+|+++|++++
T Consensus         9 ~KAavl~~~~~~---l~i~-ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~---~~~P~i~GHE~~G~Vv~vG~~v~   81 (198)
T d2jhfa1           9 CKAAVLWEEKKP---FSIE-EVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV---TPLPVIAGHEAAGIVESIGEGVT   81 (198)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC---CCSSBCCCCSEEEEEEEECTTCC
T ss_pred             EEEEEEecCCCC---CEEE-EEECCCCCCCEEEEEEEEEecccccceeecCCcc---cccceecccceeEEEEecCcccc
Confidence            799999999987   8999 8999999999999999999999999999999864   46799999999999999999999


Q ss_pred             CCCCCCEEEEecCccc---------------c------------------------CCCCCCCceeeEEeeecCceeeCC
Q 023273           81 KFKVGDEVYGDINEKA---------------L------------------------DHPKRNGSLAEYTAVEENLLALKP  121 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~---------------~------------------------~~~~~~g~~~~~~~~~~~~~~~ip  121 (284)
                      ++++||||+..+....               .                        +.....|+|+||+++|..+++++|
T Consensus        82 ~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p  161 (198)
T d2jhfa1          82 TVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID  161 (198)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECC
T ss_pred             CcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEECC
Confidence            9999999977542100               0                        001124899999999999999999


Q ss_pred             CCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEc
Q 023273          122 KNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG  158 (284)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g  158 (284)
                      +.++++.++....++.+...+  ...+++|++|.|+.
T Consensus       162 ~~~~~e~l~~~~~~~~~v~~g--~~~l~~G~~VaVi~  196 (198)
T d2jhfa1         162 AAFALDPLITHVLPFEKINEG--FDLLRSGESIRTIL  196 (198)
T ss_dssp             TTSCCGGGEEEEEEGGGHHHH--HHHHHTTCCSEEEE
T ss_pred             CCCCHHHHHHHHHHHHhhhhC--CceeeCCCEEEEEE
Confidence            998876655544443222222  23467889888764

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.93  E-value=1.9e-27  Score=185.76  Aligned_cols=155  Identities=30%  Similarity=0.276  Sum_probs=133.5

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||++++.+++. ..++++ +.+.|+|++|||+|||+|+|||++|++.+.|.++. ....|.++|+|++|+|.+  +.++
T Consensus         4 ~ka~~~~~~g~~-~~l~~~-~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~-~~~~~~~~g~e~~G~v~~--~~~~   78 (162)
T d1tt7a1           4 FQALQAEKNADD-VSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNI-VREYPLILGIDAAGTVVS--SNDP   78 (162)
T ss_dssp             EEEEEECCGGGS-CCCEEE-EEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTT-CSSCSEECCSEEEEEEEE--CSST
T ss_pred             EEEEEEEecCCC-eEEEEE-EcCCCCCCCCEEEEEEEEecccchhhheeeecccc-cccceeeeeeeccccccc--cccc
Confidence            799999999987 678999 89999999999999999999999999999987653 236678999999999998  5678


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCC
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA  160 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~  160 (284)
                      ++++||+|++.....   +...+|+|+||+.+|++.++++|+++++++||++++.++|||.++...+...+++|||.|++
T Consensus        79 ~~~~g~~v~~~~~~~---g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~~~~~~~~Vli~ga~  155 (162)
T d1tt7a1          79 RFAEGDEVIATSYEL---GVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLEETPGALKDILQNRIQ  155 (162)
T ss_dssp             TCCTTCEEEEESTTB---TTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECSTTHHHHHHHTTTTCCS
T ss_pred             ccccceeeEeeeccc---eeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCc
Confidence            899999998876432   23447999999999999999999999999999999999999987765566677889998877


Q ss_pred             chH
Q 023273          161 GGV  163 (284)
Q Consensus       161 g~~  163 (284)
                      |++
T Consensus       156 G~v  158 (162)
T d1tt7a1         156 GRV  158 (162)
T ss_dssp             SEE
T ss_pred             ceE
Confidence            654

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=3.7e-25  Score=169.29  Aligned_cols=135  Identities=21%  Similarity=0.226  Sum_probs=114.7

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||++++.++++ ..++++ +.+.|+|++|||+|||.+++||++|.+...|.++.. ..+|.++|+|++|+|+++|.  +
T Consensus         1 MkA~v~~~~~~~-~~l~i~-~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~-~~~p~v~G~e~~G~V~~~~~--~   75 (146)
T d1o89a1           1 LQALLLEQQDGK-TLASVQ-TLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKII-RNFPMIPGIDFAGTVRTSED--P   75 (146)
T ss_dssp             CEEEEEECC----CEEEEE-ECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCC-CSSSBCCCSEEEEEEEEECS--T
T ss_pred             CeEEEEEcCCCc-eEEEEE-EcCCCCCCCCEEEEEEeeccCccceeeEEEeecccc-cccceeccccccccceeecc--C
Confidence            999999999987 678898 899999999999999999999999999999986533 46789999999999999765  5


Q ss_pred             CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH
Q 023273           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL  143 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al  143 (284)
                      .+++||+|++.....   +...+|+|+||+++|++.++++|+++++++||++++++.||+..+
T Consensus        76 ~~~~g~~v~~~~~~~---g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          76 RFHAGQEVLLTGWGV---GENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIIN  135 (146)
T ss_dssp             TCCTTCEEEEECTTB---TTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHT
T ss_pred             CccceeeEEeecccc---eecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            799999998865432   223479999999999999999999999999999998888875444

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.93  E-value=3.6e-28  Score=195.95  Aligned_cols=162  Identities=22%  Similarity=0.302  Sum_probs=129.2

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCC-------CCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEE
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-------REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVE   73 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-------~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~   73 (284)
                      +||++++++++    ++++ +.+.|++       ++|||+|||.+++||++|++.++|.++   .++|+++|||++|+|+
T Consensus         2 ~kA~v~~~~~~----le~~-e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~---~~~P~v~GHE~~G~Vv   73 (201)
T d1kola1           2 NRGVVYLGSGK----VEVQ-KIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT---AQVGLVLGHEITGEVI   73 (201)
T ss_dssp             EEEEEEEETTE----EEEE-EECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC---CCTTCBCCCCEEEEEE
T ss_pred             cEEEEEeCCCc----eEEE-EecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc---cccceeccceeeeeee
Confidence            58999999986    5898 7887754       569999999999999999999998764   4679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCc--------------cc--------------cCCCCCCCceeeEEeeecC--ceeeCCCC
Q 023273           74 KVGSQVKKFKVGDEVYGDINE--------------KA--------------LDHPKRNGSLAEYTAVEEN--LLALKPKN  123 (284)
Q Consensus        74 ~vG~~~~~~~~Gd~V~~~~~~--------------~~--------------~~~~~~~g~~~~~~~~~~~--~~~~ip~~  123 (284)
                      ++|+++++|++||||...+..              ..              ......+|+|+||+++|..  .++++|++
T Consensus        74 ~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~  153 (201)
T d1kola1          74 EKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDR  153 (201)
T ss_dssp             EECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCH
T ss_pred             ccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCC
Confidence            999999999999999754310              00              0112356999999999853  69999998


Q ss_pred             CCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC
Q 023273          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG  176 (284)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g  176 (284)
                      ..+.+++++..++.++++++...+.+.++    +| +|++|+.++|.||.+ |
T Consensus       154 ~~~~~~~~~~~~~~~~~~a~~~~~~~~g~----~g-~G~vG~~~i~~ak~~-G  200 (201)
T d1kola1         154 DKAMEKINIAEVVGVQVISLDDAPRGYGE----FD-AGVPKKFVIDPHKTF-S  200 (201)
T ss_dssp             HHHHHTCCHHHHHTEEEECGGGHHHHHHH----HH-HTCSCEEEECTTCSS-C
T ss_pred             CChHHHHHHHHHHHHHHHHHHhCCCCCeE----Ee-eCHHHHHHHHHHHHc-C
Confidence            76667777766776777777666555553    46 899999999999874 5

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=9.5e-25  Score=172.64  Aligned_cols=140  Identities=19%  Similarity=0.172  Sum_probs=112.8

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||++..+++++   |+++ +.+.|+|++|||+|||.++|||++|++.+.|.++  ...+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~p---l~i~-ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~--~~~~P~i~GhE~~G~V~~vG~~V~   74 (179)
T d1uufa1           1 IKAVGAYSAKQP---LEPM-DITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA--GTVYPCVPGHEIVGRVVAVGDQVE   74 (179)
T ss_dssp             CEEEEBSSTTSC---CEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTS--CCCSSBCCCCCEEEEEEEECTTCC
T ss_pred             CeEEEEccCCCC---CEEE-EecCCCCCCCEEEEEEEEECCCCCcceeeeeeec--cccccccccccccccchhhccccc
Confidence            999999999988   9999 8999999999999999999999999999999764  346799999999999999999999


Q ss_pred             CCCCCCEEEEecC-----cc-----------------c-----cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhccc
Q 023273           81 KFKVGDEVYGDIN-----EK-----------------A-----LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLP  133 (284)
Q Consensus        81 ~~~~Gd~V~~~~~-----~~-----------------~-----~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  133 (284)
                      ++++||||...+.     .+                 .     ......+|+|+||+++|+++++++|+....   +.+.
T Consensus        75 ~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~---~~~a  151 (179)
T d1uufa1          75 KYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIE---MIRA  151 (179)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEE---EECG
T ss_pred             cCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcC---hhHh
Confidence            9999999965321     00                 0     011224699999999999999999976432   2223


Q ss_pred             chHHHHHHHHHhcccC
Q 023273          134 LATETAYEGLERSAFS  149 (284)
Q Consensus       134 ~~~~ta~~al~~~~~~  149 (284)
                      .++.++++++..+.++
T Consensus       152 ~~l~~a~~a~~~a~v~  167 (179)
T d1uufa1         152 DQINEAYERMLRGDVK  167 (179)
T ss_dssp             GGHHHHHHHHHTTCSS
T ss_pred             chhHHHHHHHHHhCcc
Confidence            3556788888666554

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.92  E-value=3.5e-25  Score=174.78  Aligned_cols=127  Identities=23%  Similarity=0.287  Sum_probs=104.9

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++.++++    ++++ +.|.|+|+++||+||+.++|||++|++.+.+..+  ...+|+++|||++|+|+++|++++
T Consensus         1 MKa~v~~~~~~----l~i~-e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~--~~~~P~i~GhE~~G~V~~vG~~v~   73 (177)
T d1jqba1           1 MKGFAMLGINK----LGWI-EKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGAL--GDRKNMILGHEAVGEVVEVGSEVK   73 (177)
T ss_dssp             CEEEEEEETTE----EEEE-ECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTT--CCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CeEEEEEeCCC----eEEE-EeeCCCCCCCEEEEEEEEEecCCCcccccccCCC--CCCCCccCcceeeEEeeecccccc
Confidence            99999999987    5999 8999999999999999999999999987755332  235789999999999999999999


Q ss_pred             CCCCCCEEEEecCcc---------------------ccCCCCCCCceeeEEeeec--CceeeCCCCCCHHhhhcccc
Q 023273           81 KFKVGDEVYGDINEK---------------------ALDHPKRNGSLAEYTAVEE--NLLALKPKNLSFVEAASLPL  134 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~---------------------~~~~~~~~g~~~~~~~~~~--~~~~~ip~~~~~~~aa~~~~  134 (284)
                      +|++||||+..+...                     ...+...+|+|+||+++|.  ..++++|+++++++++....
T Consensus        74 ~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~  150 (177)
T d1jqba1          74 DFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVY  150 (177)
T ss_dssp             SCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEE
T ss_pred             eecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHH
Confidence            999999998654210                     1123446799999999986  36899999999877665433

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.92  E-value=3.4e-27  Score=186.89  Aligned_cols=159  Identities=19%  Similarity=0.229  Sum_probs=130.2

Q ss_pred             CeEEEEcccCCCccceEEec-cccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCC--------CCCCCcccccceeEE
Q 023273            1 MKAWVYKEYGNSQSVLKFET-NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT--------DSPLPTIPGYDVAGV   71 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~-~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~--------~~~~p~~~G~e~~G~   71 (284)
                      |||++++++|++++.++++. +.|.|+|++|||+|||++++||++|++.++|.++..        ....|.++|+|++|+
T Consensus         4 ~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~g~   83 (175)
T d1gu7a1           4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFE   83 (175)
T ss_dssp             EEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEE
T ss_pred             eEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccccc
Confidence            79999999999855555541 566788899999999999999999999998875432        235678899999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH--hcccC
Q 023273           72 VEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE--RSAFS  149 (284)
Q Consensus        72 V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~--~~~~~  149 (284)
                      |++.|.++..++.||+|....        ...|+|++|+++|++.++++|++++.+  +++.+..+|||+++.  ..+++
T Consensus        84 V~~~~~~~~~~~~g~~v~~~~--------~~~g~~aey~~v~~~~~~~iP~~~~~~--~a~~~~~~ta~~~l~~~~~~~~  153 (175)
T d1gu7a1          84 VIKVGSNVSSLEAGDWVIPSH--------VNFGTWRTHALGNDDDFIKLPNPAQSK--ANGKPNGLTDAKSIETLYDGTK  153 (175)
T ss_dssp             EEEECTTCCSCCTTCEEEESS--------SCCCCSBSEEEEEGGGEEEECCHHHHH--HTTCSCCCCCCCCEEEECCSSS
T ss_pred             cccccccccccccccceeccc--------cccccccceeeehhhhccCCCccchhh--hhccchHHHHHHHHHHHhcCCC
Confidence            999999999999999998754        346899999999999999999987543  334456668888874  46899


Q ss_pred             CCCEEEEEc-CCchHHHHHHH
Q 023273          150 AGKSILVLG-GAGGVGTMVIQ  169 (284)
Q Consensus       150 ~g~~vlI~g-a~g~~G~~a~~  169 (284)
                      +|++|+|+| |+|++|.+++|
T Consensus       154 ~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         154 PLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             CHHHHHHHHHHTGGGSCEEEE
T ss_pred             CCCEEEEECccchhhhheEEe
Confidence            999999998 45789887665

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.91  E-value=6.9e-24  Score=170.52  Aligned_cols=148  Identities=24%  Similarity=0.273  Sum_probs=118.2

Q ss_pred             CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (284)
Q Consensus         1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   80 (284)
                      |||+++++++++   ++++ +.+.|+|++|||+|||.+++||++|++.+.|.++   ..+|.++|||++|+|+++|+++.
T Consensus         9 ~KAav~~~~g~~---l~i~-ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~---~~~P~i~GHE~~G~Vv~~G~~v~   81 (198)
T d1p0fa1           9 CKAAVAWEPHKP---LSLE-TITVAPPKAHEVRIKILASGICGSDSSVLKEIIP---SKFPVILGHEAVGVVESIGAGVT   81 (198)
T ss_dssp             EEEEEBSSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC---CCSSBCCCCCEEEEEEEECTTCC
T ss_pred             EEEEEEccCCCC---CEEE-EEECCCCCCCEEEEEEEEEEEecccceeeeeccc---cccccccceeeeeeeeecCcccc
Confidence            899999999987   8999 8999999999999999999999999999999864   46799999999999999999999


Q ss_pred             CCCCCCEEEEecCcc------------------cc---------------------CCCCCCCceeeEEeeecCceeeCC
Q 023273           81 KFKVGDEVYGDINEK------------------AL---------------------DHPKRNGSLAEYTAVEENLLALKP  121 (284)
Q Consensus        81 ~~~~Gd~V~~~~~~~------------------~~---------------------~~~~~~g~~~~~~~~~~~~~~~ip  121 (284)
                      ++++||||+..+...                  ..                     +.....|+|+||+.++...++++|
T Consensus        82 ~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip  161 (198)
T d1p0fa1          82 CVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKID  161 (198)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEEC
T ss_pred             cCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECC
Confidence            999999998754100                  00                     000124899999999999999999


Q ss_pred             CCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHH
Q 023273          122 KNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGT  165 (284)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~  165 (284)
                      +.++.+..+...+..         ..+.+++.|+|.| +|++|+
T Consensus       162 ~~~~~~~~~~~~~~~---------~~v~~~~~vlv~G-~G~iGl  195 (198)
T d1p0fa1         162 PKINVNFLVSTKLTL---------DQINKAFELLSSG-QGVRSI  195 (198)
T ss_dssp             TTSCGGGGEEEEECG---------GGHHHHHHHTTTS-SCSEEE
T ss_pred             CCCCHHHHHHhhcch---------hhcCCCCEEEEEC-CCcceE
Confidence            999876655444333         2233444567777 677664

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=1.9e-23  Score=163.98  Aligned_cols=148  Identities=27%  Similarity=0.305  Sum_probs=125.3

Q ss_pred             CHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCC
Q 023273          125 SFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYT  204 (284)
Q Consensus       125 ~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~  204 (284)
                      +.+.||.+.|++.|+|++++..++++|++|+|+| +|++|++++++|+.+ |++|++++++++|++.++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al~~~~~~~g~~vlI~G-aG~vG~~a~q~ak~~-G~~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVG-LGGIGSMGTLISKAM-GAETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEEC-CSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEC-CCCcchhHHHHhhhc-cccccccccchhHHHHhhccCCcEEeecc
Confidence            4577889999999999999989999999999999 699999999999996 99999999999999999999999999875


Q ss_pred             Cc-c-cccCCCcccEEEeCCCC-----cHHHHHhhccCCEEEEEcCCCCCCceeE------------EEeccHHHHHHHH
Q 023273          205 KE-N-IEDLPEKFDVVFDAVGQ-----CDKALKAVKEGGRVVSIIGSVTPPASSF------------VLTSDGSILEKLN  265 (284)
Q Consensus       205 ~~-~-~~~~~~~~d~vid~~g~-----~~~~~~~l~~~G~~v~~g~~~~~~~~~~------------~~~~~~~~~~~~~  265 (284)
                      .+ + .....+++|+++||+++     +..++++++++|+++.+|.+..+..+++            +...+++++++++
T Consensus        80 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~~~e~l  159 (168)
T d1piwa2          80 EEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLL  159 (168)
T ss_dssp             GTSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCHHHHHHHH
T ss_pred             chHHHHHhhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCCHHHHHHHH
Confidence            43 2 33446789999999774     3689999999999999998765444432            1123688999999


Q ss_pred             HHHHCCCee
Q 023273          266 PYFESGKVK  274 (284)
Q Consensus       266 ~~~~~g~i~  274 (284)
                      +++++|+||
T Consensus       160 ~li~~gkIk  168 (168)
T d1piwa2         160 KLVSEKDIK  168 (168)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHhCCCC
Confidence            999999986

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.90  E-value=7.4e-24  Score=168.58  Aligned_cols=149  Identities=26%  Similarity=0.405  Sum_probs=124.5

Q ss_pred             HhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC
Q 023273          127 VEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK  205 (284)
Q Consensus       127 ~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~  205 (284)
                      ++||+++++++|||+++ +.+++++|++|||+||+|++|++++|+|+.+ |++++++++++++.+.++++|++++++++.
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~-g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccc-cccceeeecccccccccccccccccccCCc
Confidence            47899999999999998 6778999999999999999999999999996 999999999999999999999999999877


Q ss_pred             cccccC------CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCCC-----------CceeEEEec----------
Q 023273          206 ENIEDL------PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-----------PASSFVLTS----------  256 (284)
Q Consensus       206 ~~~~~~------~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~~----------  256 (284)
                      .++.+.      ++++|++||++|+  .+.++++|+++|+++.+|.....           +...+....          
T Consensus        80 ~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (183)
T d1pqwa_          80 VDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPA  159 (183)
T ss_dssp             STHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHHHCHH
T ss_pred             cCHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceeccCHH
Confidence            665442      4689999999996  58899999999999999754311           111221110          


Q ss_pred             -cHHHHHHHHHHHHCCCeeEe
Q 023273          257 -DGSILEKLNPYFESGKVKAI  276 (284)
Q Consensus       257 -~~~~~~~~~~~~~~g~i~~~  276 (284)
                       ..+.++++.+++++|+|+|.
T Consensus       160 ~~~~~~~~v~~~i~~G~i~p~  180 (183)
T d1pqwa_         160 RYRQLLQHILQHVADGKLEVL  180 (183)
T ss_dssp             HHHHHHHHHHHHHHTTSSCCC
T ss_pred             HHHHHHHHHHHHHHCCCCcee
Confidence             24678999999999999984

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.90  E-value=3.5e-23  Score=162.71  Aligned_cols=149  Identities=26%  Similarity=0.325  Sum_probs=126.7

Q ss_pred             CCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC
Q 023273          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (284)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (284)
                      +++.+||+++|++.|||++++..+++++++|+|+|++|++|++++++++.++..+|++++.+++|++.++++|+++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~   80 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINA   80 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeecc
Confidence            57899999999999999999999999999999999889999999999999734689999999999999999999999998


Q ss_pred             CCcccccC------CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCceeE------------EEeccHHHHH
Q 023273          204 TKENIEDL------PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASSF------------VLTSDGSILE  262 (284)
Q Consensus       204 ~~~~~~~~------~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~------------~~~~~~~~~~  262 (284)
                      +..++.+.      ++++|++|||+|+   .+.++++++++|+++++|.+..+..++.            ++...+++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~Gs~~~~~~d~~  160 (170)
T d1jvba2          81 SMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFL  160 (170)
T ss_dssp             TTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCHHHHH
T ss_pred             CCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEEEecCCHHHHH
Confidence            76553332      5679999999997   4789999999999999987754433321            2233679999


Q ss_pred             HHHHHHHCCC
Q 023273          263 KLNPYFESGK  272 (284)
Q Consensus       263 ~~~~~~~~g~  272 (284)
                      ++++++++|+
T Consensus       161 ~~l~lv~~GK  170 (170)
T d1jvba2         161 GIMRLAEAGK  170 (170)
T ss_dssp             HHHHHHHTTS
T ss_pred             HHHHHHHcCC
Confidence            9999999986

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.6e-23  Score=162.66  Aligned_cols=147  Identities=25%  Similarity=0.408  Sum_probs=122.6

Q ss_pred             CCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEee
Q 023273          124 LSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID  202 (284)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~  202 (284)
                      +|++++|+++++++|||+++ +..++++|++|||+|++|++|++++++|+.+ |+++++++++++|.+.++++|+++++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~-G~~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEecccccccccccccccc-CcccccccccccccccccccCcccccc
Confidence            57899999999999999998 5789999999999999999999999999996 999999999999999999999999999


Q ss_pred             CCCcccccC------CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCC----C-----CceeEEE----eccHHHH
Q 023273          203 YTKENIEDL------PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT----P-----PASSFVL----TSDGSIL  261 (284)
Q Consensus       203 ~~~~~~~~~------~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~----~-----~~~~~~~----~~~~~~~  261 (284)
                      +++.++.+.      ++++|++||++|+  .+.++++|+++|+++.+|....    +     ...++..    ...++++
T Consensus        80 ~~~~~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~  159 (174)
T d1yb5a2          80 HREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEF  159 (174)
T ss_dssp             TTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCSCEEECTHHHHTTTCEEEECCGGGCCHHHH
T ss_pred             cccccHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCCCCCCCHHHHHHCCCEEEEEEecCCCHHHH
Confidence            887664432      5689999999985  5889999999999999975431    0     1222221    1246788


Q ss_pred             HHHHHHHHCC
Q 023273          262 EKLNPYFESG  271 (284)
Q Consensus       262 ~~~~~~~~~g  271 (284)
                      +++++++++|
T Consensus       160 ~~~~~~l~~g  169 (174)
T d1yb5a2         160 QQYAAALQAG  169 (174)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            8888888764

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.88  E-value=1.5e-22  Score=159.49  Aligned_cols=147  Identities=26%  Similarity=0.286  Sum_probs=121.6

Q ss_pred             CCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEee
Q 023273          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAID  202 (284)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~  202 (284)
                      +++++|+++++++.|+|++++.+++++|++|+|+| +|++|++++++|+.+ |+ +|++++.+++|++.++++|+++++|
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~a~~~~g~~VlI~G-aG~vGl~~~q~ak~~-Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~   78 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIG-IGAVGLMGIAGAKLR-GAGRIIGVGSRPICVEAAKFYGATDILN   78 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHHTTCCTTCCEEEEC-CSHHHHHHHHHHHTT-TCSCEEEECCCHHHHHHHHHHTCSEEEC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEEc-CCcchhhhhhhhhcc-cccccccccchhhhHHHHHhhCcccccc
Confidence            46889999999999999999999999999999998 799999999999996 75 7999999999999999999999999


Q ss_pred             CCCcccccC------CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee--------------EEE---ec
Q 023273          203 YTKENIEDL------PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS--------------FVL---TS  256 (284)
Q Consensus       203 ~~~~~~~~~------~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~--------------~~~---~~  256 (284)
                      ++++++.+.      ++++|++|||+|+   .++++++++++|+++.+|.+.....++              +..   ..
T Consensus        79 ~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  158 (174)
T d1jqba2          79 YKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG  158 (174)
T ss_dssp             GGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCCCC
T ss_pred             ccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecCCC
Confidence            876654432      4679999999985   488999999999999998765322221              111   12


Q ss_pred             cHHHHHHHHHHHHCCC
Q 023273          257 DGSILEKLNPYFESGK  272 (284)
Q Consensus       257 ~~~~~~~~~~~~~~g~  272 (284)
                      .+...+.+++++++|+
T Consensus       159 ~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         159 GRLRAERLRDMVVYNR  174 (174)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             CcccHHHHHHHHHcCC
Confidence            3456788888998875

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.88  E-value=1.6e-22  Score=158.98  Aligned_cols=150  Identities=23%  Similarity=0.266  Sum_probs=120.2

Q ss_pred             CCHHhhhcccchHHHHHHHHH----hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE
Q 023273          124 LSFVEAASLPLATETAYEGLE----RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL  199 (284)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~----~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~  199 (284)
                      +++++||+++++++|||+++.    .++.++|++|||+|++|++|.+++|+|+.+ |++|+++.++++|.+.++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~-Ga~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHc-CCceEEecCchHHHHHHHhcccce
Confidence            578999999999999997764    477889999999999999999999999995 999999999999999999999999


Q ss_pred             EeeCCCccccc----CCCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCCC-C----------ceeEEE----eccH
Q 023273          200 AIDYTKENIED----LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-P----------ASSFVL----TSDG  258 (284)
Q Consensus       200 ~~~~~~~~~~~----~~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~~-~----------~~~~~~----~~~~  258 (284)
                      ++|++......    .++++|+|||++|.  +..++++|+++|+++.+|....+ .          .+++..    ....
T Consensus        80 vi~~~~~~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv~~~~~~~  159 (176)
T d1xa0a2          80 VLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPM  159 (176)
T ss_dssp             EEECC---------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCH
T ss_pred             eeecchhHHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEEeCCcCCH
Confidence            99987543222    15689999999985  69999999999999999875321 1          122221    1235


Q ss_pred             HHHHHHHHHHHCCCeeE
Q 023273          259 SILEKLNPYFESGKVKA  275 (284)
Q Consensus       259 ~~~~~~~~~~~~g~i~~  275 (284)
                      +...++++.++ |+|+|
T Consensus       160 ~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         160 DLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             HHHHHHHHHHH-TTTCC
T ss_pred             HHHHHHHHHHh-cccCC
Confidence            67777777774 88887

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.88  E-value=4.4e-22  Score=155.72  Aligned_cols=146  Identities=23%  Similarity=0.328  Sum_probs=122.5

Q ss_pred             CCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC
Q 023273          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (284)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (284)
                      ++++++|.++|++.|||++++.+++++|++|+|.| +|++|++++++++.+ |++|++++++++|++.++++|+++++|+
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~~~~~~g~~VlV~G-aG~vG~~~~~~ak~~-G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQTNARPGQWVAISG-IGGLGHVAVQYARAM-GLHVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEee-ccccHHHHHHHHHHc-CCccceecchhhHHHhhhccCccccccc
Confidence            47899999999999999999889999999999998 699999999999996 8999999999999999999999999998


Q ss_pred             CCccccc----CCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCceeE------------EEeccHHHHHHH
Q 023273          204 TKENIED----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASSF------------VLTSDGSILEKL  264 (284)
Q Consensus       204 ~~~~~~~----~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~------------~~~~~~~~~~~~  264 (284)
                      +.++..+    ...+.|.+++++++   .+.++++++++|+++.+|.+..+..++.            ++...+++++++
T Consensus        79 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~~~~~d~~e~  158 (166)
T d1llua2          79 RQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEA  158 (166)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred             cchhHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCccCCHHHHHhCCcEEEEEeecCHHHHHHH
Confidence            7655332    24567777777765   4889999999999999987654332221            123467899999


Q ss_pred             HHHHHCC
Q 023273          265 NPYFESG  271 (284)
Q Consensus       265 ~~~~~~g  271 (284)
                      ++++++|
T Consensus       159 l~l~~~G  165 (166)
T d1llua2         159 LDFAGEG  165 (166)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHCc
Confidence            9999987

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=3e-22  Score=157.03  Aligned_cols=148  Identities=25%  Similarity=0.334  Sum_probs=122.8

Q ss_pred             CCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC
Q 023273          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (284)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (284)
                      .+++.+|.+.|+..|+|++++.+++++|++|+|.| +|++|++++|+|+.+ |+++++++.+++|++.++++|+++++++
T Consensus         4 ~~~a~~Apl~Cag~Tay~al~~~~~~~G~~VlI~G-aG~vG~~a~qlak~~-Ga~~i~~~~~~~~~~~a~~lGad~~i~~   81 (168)
T d1uufa2           4 EQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVG-IGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKALGADEVVNS   81 (168)
T ss_dssp             GGHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEET
T ss_pred             ccHHHHHHHHhHHHHHHHHHHHhCCCCCCEEEEec-cchHHHHHHHHhhcc-cccchhhccchhHHHHHhccCCcEEEEC
Confidence            45778888899999999999999999999999999 699999999999996 9999999999999999999999999998


Q ss_pred             CCcccc-cCCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC-----------ceeE--EEeccHHHHHHHHH
Q 023273          204 TKENIE-DLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-----------ASSF--VLTSDGSILEKLNP  266 (284)
Q Consensus       204 ~~~~~~-~~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~--~~~~~~~~~~~~~~  266 (284)
                      ...... ...+++|++||++|+   .+.++++++++|+++.+|.+..+.           .+.+  +.....++++++++
T Consensus        82 ~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~~~d~~e~l~  161 (168)
T d1uufa2          82 RNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLD  161 (168)
T ss_dssp             TCHHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHH
T ss_pred             chhhHHHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecCHHHHHHHHH
Confidence            765433 335789999999985   588999999999999998764221           1111  12346789999999


Q ss_pred             HHHCCCe
Q 023273          267 YFESGKV  273 (284)
Q Consensus       267 ~~~~g~i  273 (284)
                      ++++++|
T Consensus       162 l~a~~~I  168 (168)
T d1uufa2         162 FCAEHGI  168 (168)
T ss_dssp             HHHHHTC
T ss_pred             HHHHcCC
Confidence            9988765

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.87  E-value=7.8e-22  Score=154.51  Aligned_cols=149  Identities=27%  Similarity=0.375  Sum_probs=125.4

Q ss_pred             CCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC
Q 023273          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (284)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (284)
                      +++++||+++++++|||++++..++++|++|+|.| +|++|++++++++.. |++|++++.+++|++.++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~~~~~~g~~vlv~G-~G~iG~~a~~~a~~~-g~~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYG-IGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEee-cccchhhhhHHHhcC-CCeEeccCCCHHHhhhhhhcCcceeccc
Confidence            57899999999999999999999999999999998 799999999999995 9999999999999999999999999998


Q ss_pred             CCcccccC----CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee----------E--EEeccHHHHHHH
Q 023273          204 TKENIEDL----PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS----------F--VLTSDGSILEKL  264 (284)
Q Consensus       204 ~~~~~~~~----~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~----------~--~~~~~~~~~~~~  264 (284)
                      .++++...    ..+.|.+++++++   .+.++++++++|+++.+|.+..+..++          +  +....+++++++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~  158 (168)
T d1rjwa2          79 LKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEA  158 (168)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred             ccchhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcEEEEEeeCCHHHHHHH
Confidence            77654432    3456666666664   589999999999999998776443332          1  222467899999


Q ss_pred             HHHHHCCCee
Q 023273          265 NPYFESGKVK  274 (284)
Q Consensus       265 ~~~~~~g~i~  274 (284)
                      ++++++|+|+
T Consensus       159 l~l~~~Gkik  168 (168)
T d1rjwa2         159 LQFAAEGKVK  168 (168)
T ss_dssp             HHHHHTTSCC
T ss_pred             HHHHHhCCCC
Confidence            9999999985

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=4.8e-22  Score=157.42  Aligned_cols=121  Identities=30%  Similarity=0.410  Sum_probs=109.2

Q ss_pred             CCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEee
Q 023273          124 LSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID  202 (284)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~  202 (284)
                      +++++||+++++++|||+++ +..++++|++|+|+|++|++|++++|+|+.. |++|++++++++|.+.++++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~-Ga~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHh-CCeEeecccchHHHHHHHhcCCeEEEE
Confidence            57899999999999999999 4678999999999999999999999999995 999999999999999999999999999


Q ss_pred             CCCcccccC------CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCC
Q 023273          203 YTKENIEDL------PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       203 ~~~~~~~~~------~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~  245 (284)
                      ++++++.+.      ++++|+++|+.|.  ...++++++++|+++.++...
T Consensus        80 ~~~~d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  130 (179)
T d1qora2          80 YREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSS  130 (179)
T ss_dssp             TTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTT
T ss_pred             CCCCCHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeeccccc
Confidence            887665442      5689999999985  589999999999999987654

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.87  E-value=3.5e-21  Score=151.42  Aligned_cols=146  Identities=18%  Similarity=0.235  Sum_probs=119.6

Q ss_pred             CHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEee
Q 023273          125 SFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAID  202 (284)
Q Consensus       125 ~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~  202 (284)
                      +++++|.+.|++.|+|+++ +.+++++|++|+|+| +|++|++++++++.+ |+ +|++++.+++|++.++++|++++++
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G-~G~iGl~a~~~ak~~-Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~   79 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKALGATDCLN   79 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCSEEEC
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CChHHHHHHHHHHHh-CCceeeeeccchHHHHHHHHhCCCcccC
Confidence            5788999999999999998 679999999999998 899999999999997 65 6888899999999999999999998


Q ss_pred             CCCcc--ccc-----CCCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCCCCceeE-----------EEe-c--c
Q 023273          203 YTKEN--IED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPASSF-----------VLT-S--D  257 (284)
Q Consensus       203 ~~~~~--~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-----------~~~-~--~  257 (284)
                      +...+  ...     .++++|++|||+|+   .+.++++++++ |+++++|.+..+..++.           ++. +  .
T Consensus        80 ~~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~~~~~~k~i~Gs~~Gs~~~  159 (174)
T d1e3ia2          80 PRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSINGTFFGGWKS  159 (174)
T ss_dssp             GGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTCEEEECSGGGCCH
T ss_pred             CccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchHHHhccCEEEEEEeeCCCh
Confidence            65322  111     16799999999997   48899999996 99999998754322221           111 1  2


Q ss_pred             HHHHHHHHHHHHCCC
Q 023273          258 GSILEKLNPYFESGK  272 (284)
Q Consensus       258 ~~~~~~~~~~~~~g~  272 (284)
                      .++++++++++++|+
T Consensus       160 ~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         160 VDSVPNLVSDYKNKK  174 (174)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            578999999999986

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.87  E-value=1.6e-21  Score=153.41  Aligned_cols=145  Identities=27%  Similarity=0.370  Sum_probs=120.0

Q ss_pred             HHhhhcccchHHHHHHHHHh-c-ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC
Q 023273          126 FVEAASLPLATETAYEGLER-S-AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (284)
Q Consensus       126 ~~~aa~~~~~~~ta~~al~~-~-~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (284)
                      +.++|+++++++|||+++.. . .++||++|+|.| +|++|++++++++.+++.++++++.+++|++.++++|+++++++
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~G-aG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~   84 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVG-VGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDA   84 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeC-CChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecC
Confidence            57889999999999999964 3 579999999999 79999999999999744677888899999999999999999998


Q ss_pred             CCcccccC-----CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee----------E--EEeccHHHHHH
Q 023273          204 TKENIEDL-----PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS----------F--VLTSDGSILEK  263 (284)
Q Consensus       204 ~~~~~~~~-----~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~----------~--~~~~~~~~~~~  263 (284)
                      +++.+...     ++++|++|||+|+   .+.++++++++|+++++|.... ..++          +  +....++++++
T Consensus        85 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~-~~~~~~~l~~k~~~i~Gs~~~~~~d~~~  163 (172)
T d1h2ba2          85 RRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGGE-LRFPTIRVISSEVSFEGSLVGNYVELHE  163 (172)
T ss_dssp             TSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSSC-CCCCHHHHHHTTCEEEECCSCCHHHHHH
T ss_pred             cccHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCccc-ccCCHHHHHhCCcEEEEEEecCHHHHHH
Confidence            76654432     5689999999996   4889999999999999986532 1221          1  22346789999


Q ss_pred             HHHHHHCCC
Q 023273          264 LNPYFESGK  272 (284)
Q Consensus       264 ~~~~~~~g~  272 (284)
                      +++++++|+
T Consensus       164 ~l~l~~~GK  172 (172)
T d1h2ba2         164 LVTLALQGK  172 (172)
T ss_dssp             HHHHHHTTS
T ss_pred             HHHHHHcCC
Confidence            999999986

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=2.5e-22  Score=157.88  Aligned_cols=121  Identities=34%  Similarity=0.472  Sum_probs=105.8

Q ss_pred             CCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC
Q 023273          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (284)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (284)
                      ++++++|+++++++|||++++.+++++|++|+|+|++|++|++++++|+.+ |++|++++++++|.+.++++|+++++|+
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~-G~~vi~~~~~~~~~~~~~~lGa~~~i~~   79 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLALGAEEAATY   79 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccchhhhhhhhccc-ccccccccccccccccccccccceeeeh
Confidence            578999999999999999998899999999999999999999999999995 9999999999999999999999999988


Q ss_pred             CCcc-cccCCCcccEEEeCCCC-cHHHHHhhccCCEEEEEcCCC
Q 023273          204 TKEN-IEDLPEKFDVVFDAVGQ-CDKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       204 ~~~~-~~~~~~~~d~vid~~g~-~~~~~~~l~~~G~~v~~g~~~  245 (284)
                      .+.. .....+++|++||++|. .+.++++++++|+++.+|...
T Consensus        80 ~~~~~~~~~~~g~D~v~d~~G~~~~~~~~~l~~~G~~v~~G~~~  123 (171)
T d1iz0a2          80 AEVPERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIGAAE  123 (171)
T ss_dssp             GGHHHHHHHTTSEEEEEECSCTTHHHHHTTEEEEEEEEEC----
T ss_pred             hhhhhhhhccccccccccccchhHHHHHHHHhcCCcEEEEeCCC
Confidence            6432 12236789999999985 689999999999999998653

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.9e-21  Score=152.84  Aligned_cols=148  Identities=23%  Similarity=0.318  Sum_probs=122.1

Q ss_pred             CCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEee
Q 023273          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAID  202 (284)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~  202 (284)
                      +++++||++ .++++||++++++++++|++|+|+| +|++|++++++++.+ |+ +|++++++++|++.++++|++++++
T Consensus         1 vS~e~Aal~-epla~a~~a~~~~~~~~gd~VlI~G-~G~iG~~~~~~a~~~-G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~   77 (171)
T d1pl8a2           1 VTFEEGALI-EPLSVGIHACRRGGVTLGHKVLVCG-AGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEIGADLVLQ   77 (171)
T ss_dssp             SCHHHHHHH-HHHHHHHHHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHH-HHHHHHHHHHHHhCCCCCCEEEEEC-CCccHHHHHHHHHHc-CCceEEeccCCHHHHHHHHHhCCccccc
Confidence            367787765 4667899999999999999999999 699999999999996 76 7999999999999999999999988


Q ss_pred             CCCccccc--------CCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCceeE----------EE-eccHHH
Q 023273          203 YTKENIED--------LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASSF----------VL-TSDGSI  260 (284)
Q Consensus       203 ~~~~~~~~--------~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~----------~~-~~~~~~  260 (284)
                      .+.++...        .+.++|++|||+|+   .+.++++++++|+++++|.+..+..+++          .. ....++
T Consensus        78 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i~Gs~~~~~~  157 (171)
T d1pl8a2          78 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNT  157 (171)
T ss_dssp             CSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSC
T ss_pred             ccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEEEEEeCCHhH
Confidence            77655332        15689999999997   4889999999999999998765444332          11 123568


Q ss_pred             HHHHHHHHHCCCee
Q 023273          261 LEKLNPYFESGKVK  274 (284)
Q Consensus       261 ~~~~~~~~~~g~i~  274 (284)
                      ++++++++++|+|+
T Consensus       158 ~~~al~li~~gkid  171 (171)
T d1pl8a2         158 WPVAISMLASKSVN  171 (171)
T ss_dssp             HHHHHHHHHTTSCC
T ss_pred             HHHHHHHHHcCCCC
Confidence            99999999999874

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.86  E-value=3e-21  Score=152.08  Aligned_cols=146  Identities=17%  Similarity=0.241  Sum_probs=118.5

Q ss_pred             CHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEee
Q 023273          125 SFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAID  202 (284)
Q Consensus       125 ~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~  202 (284)
                      +++.++.++|++.|||+++ +.+++++|++|+|+| +|++|++++++|+.+ |+ ++++++.+++|++.++++|+++++|
T Consensus         2 P~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G-~G~iG~~~~~~ak~~-g~~~v~~~~~~~~k~~~a~~~Ga~~~i~   79 (174)
T d1f8fa2           2 PIELLGPLGCGIQTGAGACINALKVTPASSFVTWG-AGAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQLGATHVIN   79 (174)
T ss_dssp             CGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEES-CSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred             CHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeC-CCHHHhhhhhccccc-ccceeeeeccHHHHHHHHHHcCCeEEEe
Confidence            4567889999999999997 678999999999999 699999999999997 65 5566788999999999999999999


Q ss_pred             CCCcccccC-----CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCC--CceeE--------EE-ec------c
Q 023273          203 YTKENIEDL-----PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP--PASSF--------VL-TS------D  257 (284)
Q Consensus       203 ~~~~~~~~~-----~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~--~~~~~--------~~-~~------~  257 (284)
                      ++.+++.+.     .+++|++|||+|+   .+.++++++++|+++++|.+...  ..++.        .+ ++      .
T Consensus        80 ~~~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~  159 (174)
T d1f8fa2          80 SKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSP  159 (174)
T ss_dssp             TTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSCH
T ss_pred             CCCcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCCCh
Confidence            876654432     5689999999996   48889999999999999875422  12211        11 11      2


Q ss_pred             HHHHHHHHHHHHCCC
Q 023273          258 GSILEKLNPYFESGK  272 (284)
Q Consensus       258 ~~~~~~~~~~~~~g~  272 (284)
                      +++++++++|+++|+
T Consensus       160 ~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         160 KKFIPELVRLYQQGK  174 (174)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHcCC
Confidence            578999999999986

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.85  E-value=6e-21  Score=151.42  Aligned_cols=145  Identities=23%  Similarity=0.333  Sum_probs=118.6

Q ss_pred             CHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEee
Q 023273          125 SFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAID  202 (284)
Q Consensus       125 ~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~  202 (284)
                      +++.+|.+.|+++|||+++ +..++++|++|+|+| +|++|++++++|+++ |+ +|++++++++|++.++++|+++++|
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~G-aG~iG~~~~~~ak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~   79 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEEIGADLTLN   79 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEEC-CCccchhheeccccc-ccccccccccccccccccccccceEEEe
Confidence            3567788899999999999 467899999999999 699999999999996 86 7999999999999999999999999


Q ss_pred             CCCcccccC---------CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee-------------E--EEe
Q 023273          203 YTKENIEDL---------PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS-------------F--VLT  255 (284)
Q Consensus       203 ~~~~~~~~~---------~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~-------------~--~~~  255 (284)
                      +.+.+..+.         +.++|+||||+|+   .+.++++++++|+++++|.+.....+.             +  +..
T Consensus        80 ~~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~  159 (182)
T d1vj0a2          80 RRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWV  159 (182)
T ss_dssp             TTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCC
T ss_pred             ccccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEe
Confidence            876553221         4589999999996   478999999999999998654332222             1  112


Q ss_pred             ccHHHHHHHHHHHHCC
Q 023273          256 SDGSILEKLNPYFESG  271 (284)
Q Consensus       256 ~~~~~~~~~~~~~~~g  271 (284)
                      .+.+++++++++++++
T Consensus       160 ~~~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         160 SDTSHFVKTVSITSRN  175 (182)
T ss_dssp             CCHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHHHC
Confidence            3578899999998875

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.85  E-value=8e-21  Score=149.02  Aligned_cols=146  Identities=21%  Similarity=0.270  Sum_probs=117.3

Q ss_pred             CCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC
Q 023273          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (284)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (284)
                      +++++||++ .++++||++++..++++|++|+|+| +|++|++++++|+.+ |++|++++++++|++.++++|++..++.
T Consensus         1 VS~e~Aal~-ePla~a~~a~~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~-Ga~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALL-EPLSVGVHACRRAGVQLGTTVLVIG-AGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTH-HHHHHHHHHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHH-HHHHHHHHHHHHhCCCCCCEEEEEc-ccccchhhHhhHhhh-cccccccchHHHHHHHHHHcCCcEEEec
Confidence            467787766 4566899999999999999999998 899999999999995 9999999999999999999999877654


Q ss_pred             CC--ccccc--------CCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCceeE----------EE-eccHH
Q 023273          204 TK--ENIED--------LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASSF----------VL-TSDGS  259 (284)
Q Consensus       204 ~~--~~~~~--------~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~----------~~-~~~~~  259 (284)
                      +.  .+...        .++++|++|||+|+   .+.++++++++|+++.+|.+..+..+++          .. ....+
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~gs~~~~~  157 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCN  157 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSS
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCCCcCHHHHHHCCCEEEEEECCHH
Confidence            32  22111        25689999999997   4889999999999999998765433332          11 12345


Q ss_pred             HHHHHHHHHHCCC
Q 023273          260 ILEKLNPYFESGK  272 (284)
Q Consensus       260 ~~~~~~~~~~~g~  272 (284)
                      +++++++++++|+
T Consensus       158 ~~~~ai~li~~Gk  170 (170)
T d1e3ja2         158 DYPIALEMVASGR  170 (170)
T ss_dssp             CHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHcCC
Confidence            7999999999986

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.85  E-value=1.5e-20  Score=147.83  Aligned_cols=146  Identities=18%  Similarity=0.206  Sum_probs=116.7

Q ss_pred             HHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCC
Q 023273          126 FVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYT  204 (284)
Q Consensus       126 ~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~  204 (284)
                      |.++|++.|++.|+|+++ +.+++++|++|+|+| +|++|++++++++.++..+|++++++++|++.++++|+++++|++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~G-aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~   80 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPK   80 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCC
Confidence            456899999999999997 678999999999999 799999999999997335788889999999999999999999876


Q ss_pred             Ccc--ccc-----CCCcccEEEeCCCCc---HHHHHhhcc-CCEEEEEcCCCCCCceeE---------EE-e----c-cH
Q 023273          205 KEN--IED-----LPEKFDVVFDAVGQC---DKALKAVKE-GGRVVSIIGSVTPPASSF---------VL-T----S-DG  258 (284)
Q Consensus       205 ~~~--~~~-----~~~~~d~vid~~g~~---~~~~~~l~~-~G~~v~~g~~~~~~~~~~---------~~-~----~-~~  258 (284)
                      ..+  ...     .++++|++||++|+.   ..++..+++ +|+++++|.+.....+++         +. +    + ..
T Consensus        81 ~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~  160 (174)
T d1p0fa2          81 DYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKG  160 (174)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCCG
T ss_pred             CchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCCCH
Confidence            433  222     256899999999973   667777766 599999987653333322         11 1    1 35


Q ss_pred             HHHHHHHHHHHCCC
Q 023273          259 SILEKLNPYFESGK  272 (284)
Q Consensus       259 ~~~~~~~~~~~~g~  272 (284)
                      ++++++++++++|+
T Consensus       161 ~d~~~lidl~~~gK  174 (174)
T d1p0fa2         161 EEVSRLVDDYMKKK  174 (174)
T ss_dssp             GGHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            68999999999986

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.84  E-value=5.2e-20  Score=145.10  Aligned_cols=147  Identities=21%  Similarity=0.278  Sum_probs=115.7

Q ss_pred             CHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC
Q 023273          125 SFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (284)
Q Consensus       125 ~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (284)
                      +++++|.++|++.|+|+++ +.++++||++|+|+| +|++|++++|+++.++..+|++++++++|++.++++|+++++|+
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~G-aGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~   80 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEec-chhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeC
Confidence            4688999999999999998 578999999999999 68999999999999733577788889999999999999999987


Q ss_pred             CCc--cccc-----CCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCc------------eeEE--E-ec--
Q 023273          204 TKE--NIED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA------------SSFV--L-TS--  256 (284)
Q Consensus       204 ~~~--~~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~------------~~~~--~-~~--  256 (284)
                      ...  +..+     ..+++|++||++|+   .+.+..+++++|+++.+++......            ..+.  . .+  
T Consensus        81 ~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  160 (176)
T d2fzwa2          81 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWK  160 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             CchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCCc
Confidence            542  2222     25689999999997   3778889999988887765432111            1111  1 11  


Q ss_pred             cHHHHHHHHHHHHCCC
Q 023273          257 DGSILEKLNPYFESGK  272 (284)
Q Consensus       257 ~~~~~~~~~~~~~~g~  272 (284)
                      ..+++.++++++++|+
T Consensus       161 ~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         161 SVESVPKLVSEYMSKK  176 (176)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            2578999999999986

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.84  E-value=1.2e-20  Score=149.58  Aligned_cols=113  Identities=33%  Similarity=0.511  Sum_probs=101.6

Q ss_pred             hcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccc
Q 023273          130 ASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI  208 (284)
Q Consensus       130 a~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~  208 (284)
                      +++.++++|||+++ +..++++|++|||+|++|++|++++|+|+.. |++||++++++++.+.++++|++++++++.+++
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~   86 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNS   86 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTSCSC
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHcc-CCEEEEeCCCHHHHHHHHhhhhhhhcccccccH
Confidence            46788999999999 5789999999999999999999999999995 999999999999999999999999999876654


Q ss_pred             cc------CCCcccEEEeCCCC--cHHHHHhhccCCEEEEEcC
Q 023273          209 ED------LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       209 ~~------~~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~  243 (284)
                      .+      ..+++|++||++|.  .+.++++|+++|+++.+|.
T Consensus        87 ~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~  129 (182)
T d1v3va2          87 LEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGA  129 (182)
T ss_dssp             HHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCC
T ss_pred             HHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecc
Confidence            33      25789999999995  5899999999999999975

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.83  E-value=2.9e-20  Score=148.34  Aligned_cols=148  Identities=20%  Similarity=0.294  Sum_probs=116.6

Q ss_pred             CCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEE-cCCchHHHHHHHHHHHhcCCeEEEEeCChh----hHHHHHHcCC
Q 023273          124 LSFVEAASLPLATETAYEGL-ERSAFSAGKSILVL-GGAGGVGTMVIQLAKHVFGASKVAATSSTA----KLDLLRSLGA  197 (284)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~-ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~----~~~~~~~~g~  197 (284)
                      +++++||+++++++|||+++ +..+++||++++|+ |++|++|++++|+||.+ |++||+++++++    +.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~-Ga~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhc-CCeEEEEEecccccchHHhhhhhccc
Confidence            57899999999999999999 46899999988886 77899999999999996 999999986543    4566789999


Q ss_pred             cEEeeCCCccccc-----------CCCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCCC-C----------ceeEE
Q 023273          198 DLAIDYTKENIED-----------LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-P----------ASSFV  253 (284)
Q Consensus       198 ~~~~~~~~~~~~~-----------~~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~~-~----------~~~~~  253 (284)
                      +++++++..+..+           .++++|++||++|.  ...++++|+++|+++.+|..... .          ++++.
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i~  159 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSA  159 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEE
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEEE
Confidence            9999875433222           15679999999995  58899999999999999865422 1          12222


Q ss_pred             Eec-----------cHHHHHHHHHHHHCCC
Q 023273          254 LTS-----------DGSILEKLNPYFESGK  272 (284)
Q Consensus       254 ~~~-----------~~~~~~~~~~~~~~g~  272 (284)
                      ...           ..+.+.++++++++|+
T Consensus       160 G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         160 GFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             ECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            110           1467899999999886

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.83  E-value=2.3e-19  Score=141.21  Aligned_cols=145  Identities=17%  Similarity=0.204  Sum_probs=115.6

Q ss_pred             CHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC
Q 023273          125 SFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (284)
Q Consensus       125 ~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (284)
                      +++.+|.++|++.|+|+++ +.+++++|++|+|+| +|++|++++++++.++..+|++++.+++|++.++++|+++++|+
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~   81 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISP   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECc
Confidence            5789999999999999998 678999999999999 79999999999999633689999999999999999999999997


Q ss_pred             CCcccc-c------CCCcccEEEeCCCCc---HHHHHhhccC-CEEEEEcCCCCCCceeE---------EE-ec------
Q 023273          204 TKENIE-D------LPEKFDVVFDAVGQC---DKALKAVKEG-GRVVSIIGSVTPPASSF---------VL-TS------  256 (284)
Q Consensus       204 ~~~~~~-~------~~~~~d~vid~~g~~---~~~~~~l~~~-G~~v~~g~~~~~~~~~~---------~~-~~------  256 (284)
                      ++.+.. .      .++|+|++||++|..   ..++..+.++ |+++++|.+.....+.+         ++ ++      
T Consensus        82 ~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  161 (176)
T d1d1ta2          82 KDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLK  161 (176)
T ss_dssp             GGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             cccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeCCC
Confidence            654322 1      167899999999974   4556666554 99999998764433322         11 11      


Q ss_pred             cHHHHHHHHHHHHC
Q 023273          257 DGSILEKLNPYFES  270 (284)
Q Consensus       257 ~~~~~~~~~~~~~~  270 (284)
                      ..++++++++++.+
T Consensus       162 ~~~dip~li~~~~~  175 (176)
T d1d1ta2         162 SRDDVPKLVTEFLA  175 (176)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHhC
Confidence            25788888888754

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.82  E-value=4.1e-19  Score=139.74  Aligned_cols=147  Identities=15%  Similarity=0.217  Sum_probs=114.8

Q ss_pred             CHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC
Q 023273          125 SFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (284)
Q Consensus       125 ~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (284)
                      +++++|.++|++.|+|+++ +.+++++|++|+|+| +|++|+.+++.++..++.+|++++++++|++.++++|+++++|+
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G-~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~   80 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP   80 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEe-cCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcC
Confidence            4788999999999999998 678999999999999 79999999999888655689999999999999999999999997


Q ss_pred             CCcc-c-ccC-----CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCC-CCce----------eEE--E-ec--c
Q 023273          204 TKEN-I-EDL-----PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT-PPAS----------SFV--L-TS--D  257 (284)
Q Consensus       204 ~~~~-~-~~~-----~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~-~~~~----------~~~--~-~~--~  257 (284)
                      ..++ . ...     .+++|++||++|+   ...++.+++++|.++.+++... ....          .+.  . ++  .
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~  160 (175)
T d1cdoa2          81 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKG  160 (175)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGCCH
T ss_pred             CCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCCcH
Confidence            6443 2 121     5689999999997   3677788888766655554432 2111          111  1 11  2


Q ss_pred             HHHHHHHHHHHHCCC
Q 023273          258 GSILEKLNPYFESGK  272 (284)
Q Consensus       258 ~~~~~~~~~~~~~g~  272 (284)
                      +++++++++++++|+
T Consensus       161 ~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         161 KDGVPKMVKAYLDKK  175 (175)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHcCC
Confidence            589999999999986

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.81  E-value=5e-19  Score=139.41  Aligned_cols=147  Identities=21%  Similarity=0.270  Sum_probs=114.2

Q ss_pred             CHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC
Q 023273          125 SFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (284)
Q Consensus       125 ~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (284)
                      +++++|.++|++.|+|+++ +.+++++|++|+|+| +|++|++++++++..++.+|++++++++|.+.++++|+++.+++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~G-aGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~   80 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEEC-CCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEec
Confidence            4688999999999999998 679999999999999 58899999999999745689999999999999999999998886


Q ss_pred             CCc-c-ccc-----CCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCC-CCCCceeE---------EE-ec------
Q 023273          204 TKE-N-IED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGS-VTPPASSF---------VL-TS------  256 (284)
Q Consensus       204 ~~~-~-~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~-~~~~~~~~---------~~-~~------  256 (284)
                      .+. + ...     ..+++|++||++|.   .+.++.+++++|+.+.+++. ........         .+ ++      
T Consensus        81 ~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  160 (176)
T d2jhfa2          81 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFK  160 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             CCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCC
Confidence            432 2 222     25699999999996   37788899887555555443 32222111         11 11      


Q ss_pred             cHHHHHHHHHHHHCCC
Q 023273          257 DGSILEKLNPYFESGK  272 (284)
Q Consensus       257 ~~~~~~~~~~~~~~g~  272 (284)
                      .+++++++++++++|+
T Consensus       161 ~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         161 SKDSVPKLVADFMAKK  176 (176)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHCcC
Confidence            2678999999999986

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.79  E-value=1.6e-18  Score=138.51  Aligned_cols=118  Identities=20%  Similarity=0.242  Sum_probs=102.7

Q ss_pred             HhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCc
Q 023273          127 VEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE  206 (284)
Q Consensus       127 ~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~  206 (284)
                      ++.++++..+.|||++++.+++++|++|+|+| +|++|++++++|+.+++.+|++++.+++|++.++++|+++++++...
T Consensus         2 ~d~~~l~d~~~ta~~a~~~a~v~~G~tVlV~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~   80 (195)
T d1kola2           2 RDLTCLSDILPTGYHGAVTAGVGPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDT   80 (195)
T ss_dssp             HHHGGGGTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSS
T ss_pred             chHHhcccHHHHHHHHHHHhCCCCCCEEEEEC-cCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCCc
Confidence            46778899999999999999999999999998 79999999999998744589999999999999999999999988766


Q ss_pred             ccccC------CCcccEEEeCCCC------------------cHHHHHhhccCCEEEEEcCCC
Q 023273          207 NIEDL------PEKFDVVFDAVGQ------------------CDKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       207 ~~~~~------~~~~d~vid~~g~------------------~~~~~~~l~~~G~~v~~g~~~  245 (284)
                      ++.+.      +.++|++||++|.                  ++.++++++++|+++++|.+.
T Consensus        81 ~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~  143 (195)
T d1kola2          81 PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYV  143 (195)
T ss_dssp             CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCC
T ss_pred             CHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecC
Confidence            54331      5689999999981                  378999999999999998753

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=7.9e-19  Score=137.94  Aligned_cols=121  Identities=24%  Similarity=0.262  Sum_probs=104.3

Q ss_pred             CCHHhhhcccchHHHHHHHHH---hcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE
Q 023273          124 LSFVEAASLPLATETAYEGLE---RSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL  199 (284)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~---~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~  199 (284)
                      +|+.++|++++++.|||+++.   ..+ ..++++|||+||+|++|.+++|+||.+ |++||+++++++|.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~-Ga~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKL-GYQVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHc-CCCeEEEecchhHHHHHHhhcccc
Confidence            578999999999999998763   334 445569999999999999999999996 999999999999999999999999


Q ss_pred             EeeCCCcccccC--CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCC
Q 023273          200 AIDYTKENIEDL--PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       200 ~~~~~~~~~~~~--~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~  245 (284)
                      ++|+++.++.+.  ....|.++|++|+  ....+++|+++|+++.+|...
T Consensus        80 vi~~~~~~~~~~l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~  129 (177)
T d1o89a2          80 VLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAG  129 (177)
T ss_dssp             EEEGGGSSSCCSSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTT
T ss_pred             ccccccHHHHHHHHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccC
Confidence            999876554443  3568999999995  589999999999999998654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=8.9e-19  Score=139.30  Aligned_cols=117  Identities=27%  Similarity=0.465  Sum_probs=94.4

Q ss_pred             CHHhhhcccchHHHHHHHH-HhcccCCC--CEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHH-HHHHcCCcE
Q 023273          125 SFVEAASLPLATETAYEGL-ERSAFSAG--KSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLD-LLRSLGADL  199 (284)
Q Consensus       125 ~~~~aa~~~~~~~ta~~al-~~~~~~~g--~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~-~~~~~g~~~  199 (284)
                      ++.+. +++++++|||+++ ...++++|  ++|||+||+|++|++++|+|+.+ |++ |+.++.++++.. .++++|+++
T Consensus         3 ~~~~g-alg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~-Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           3 SYFLG-AIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLL-GCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGGT-TTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHT-TCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             cHHHH-HhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHc-CCcceecccchHHHHhhhhhcccceE
Confidence            34443 4778899999999 56788887  88999999999999999999996 875 445566666554 556899999


Q ss_pred             EeeCCCcccccC-----CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcC
Q 023273          200 AIDYTKENIEDL-----PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       200 ~~~~~~~~~~~~-----~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~  243 (284)
                      ++|+..+++.+.     .+++|++||++|.  .+.++++|+++|+++.+|.
T Consensus        81 vi~~~~~~~~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~  131 (187)
T d1vj1a2          81 AVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQ  131 (187)
T ss_dssp             EEETTSSCHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC--
T ss_pred             EeeccchhHHHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEecc
Confidence            999987765542     6789999999995  6899999999999999875

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.71  E-value=1e-17  Score=130.27  Aligned_cols=110  Identities=27%  Similarity=0.303  Sum_probs=92.2

Q ss_pred             hHHHHHHH---HH-hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc
Q 023273          135 ATETAYEG---LE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED  210 (284)
Q Consensus       135 ~~~ta~~a---l~-~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  210 (284)
                      ++.|||.+   +. ....+++++|||+||+|++|.+++|+|+.+ |++|+.++++++|.+.++++|++.++++++.....
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~~~~   82 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQLGASEVISREDVYDGT   82 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSC
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHc-CCceEEEecCHHHHHHHHhhcccceEeccchhchh
Confidence            45677655   43 355667889999999999999999999996 99999999999999999999999999876432222


Q ss_pred             ----CCCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCC
Q 023273          211 ----LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       211 ----~~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~  245 (284)
                          .++++|++||++|.  +..++++|+++|+++.+|...
T Consensus        83 ~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~  123 (167)
T d1tt7a2          83 LKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTG  123 (167)
T ss_dssp             CCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSS
T ss_pred             hhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccC
Confidence                25689999999996  589999999999999998765

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.67  E-value=8.3e-16  Score=116.39  Aligned_cols=133  Identities=17%  Similarity=0.184  Sum_probs=100.5

Q ss_pred             eEEEEccc--CCC-ccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCC
Q 023273            2 KAWVYKEY--GNS-QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ   78 (284)
Q Consensus         2 ~a~~~~~~--g~~-~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~   78 (284)
                      |++++...  |.+ .++|+++ +.+.|+|++|||+||++|.++++........      .+.+..+..+++|+|++  |+
T Consensus         5 k~~vl~~~P~G~P~~~~f~l~-e~~ip~~~~gevLvk~~~~svDp~~R~~~~~------~~~g~~~~g~~vg~Vv~--S~   75 (147)
T d1v3va1           5 KSWTLKKHFQGKPTQSDFELK-TVELPPLKNGEVLLEALFLSVDPYMRIASKR------LKEGAVMMGQQVARVVE--SK   75 (147)
T ss_dssp             EEEEESSCCCSSCCGGGEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHHGGG------SCTTSBCCCCEEEEEEE--ES
T ss_pred             EEEEEccCCCCCCcccceEEE-EEECCCCCCCEEEEEEEEEeEcccccccccc------cccCCccccceEEEEEE--eC
Confidence            57788765  544 2469999 8999999999999999999999876543321      23344566788999987  78


Q ss_pred             CCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCH-----HhhhcccchHHHHHH-HHHhcccCCCC
Q 023273           79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSF-----VEAASLPLATETAYE-GLERSAFSAGK  152 (284)
Q Consensus        79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~-----~~aa~~~~~~~ta~~-al~~~~~~~g~  152 (284)
                      +++|++||+|++            .++|++|.+.+.+.+.++|+.++.     ...+++....+||++ .+ ....+.|+
T Consensus        76 ~~~f~~GD~V~g------------~~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl-~~~~k~Ge  142 (147)
T d1v3va1          76 NSAFPAGSIVLA------------QSGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEM-LNGANLGK  142 (147)
T ss_dssp             CTTSCTTCEEEE------------CCCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHH-HTTCCSSE
T ss_pred             CCcccCCCEEEE------------ccCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHh-hCCCCCCC
Confidence            899999999988            468999999999999999876432     234556666677544 44 44456799


Q ss_pred             EEEE
Q 023273          153 SILV  156 (284)
Q Consensus       153 ~vlI  156 (284)
                      +|++
T Consensus       143 tvv~  146 (147)
T d1v3va1         143 AVVT  146 (147)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            9986

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.46  E-value=7.3e-14  Score=92.95  Aligned_cols=73  Identities=29%  Similarity=0.356  Sum_probs=66.4

Q ss_pred             CCHHhhhcccchHHHHHHHHH----hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC
Q 023273          124 LSFVEAASLPLATETAYEGLE----RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA  197 (284)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~----~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~  197 (284)
                      +|+++++.+++++.|||.++.    ....+++++|+|+|++|++|.+++|+++.+ |++|++++++++|.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~-G~~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKL-GYQVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHHCCC
Confidence            578999999999999998863    356789999999999999999999999996 9999999999999999999874

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.15  E-value=2.4e-06  Score=64.20  Aligned_cols=92  Identities=21%  Similarity=0.259  Sum_probs=72.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC--cEEeeCCCcccccCCCcccEEEeCCC---C
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA--DLAIDYTKENIEDLPEKFDVVFDAVG---Q  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~d~vid~~g---~  224 (284)
                      +..+|+|+| +|..|+.|++.|+.+ |++|.+++.+.++++++++...  ......+.+.+.+.....|+||.++-   .
T Consensus        31 ~pa~V~ViG-aGvaG~~A~~~A~~l-GA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~  108 (168)
T d1pjca1          31 KPGKVVILG-GGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGR  108 (168)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred             CCcEEEEEC-CChHHHHHHHHHhhC-CCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCc
Confidence            457899999 899999999999997 9999999999999999876542  22333333334444567999999864   1


Q ss_pred             --c----HHHHHhhccCCEEEEEcC
Q 023273          225 --C----DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       225 --~----~~~~~~l~~~G~~v~~g~  243 (284)
                        +    +.+++.|++++.+|.+..
T Consensus       109 ~aP~lIt~~mv~~Mk~GSVIVDvai  133 (168)
T d1pjca1         109 RAPILVPASLVEQMRTGSVIVDVAV  133 (168)
T ss_dssp             SCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             ccCeeecHHHHhhcCCCcEEEEeec
Confidence              2    899999999999999844

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.05  E-value=1.5e-05  Score=60.59  Aligned_cols=91  Identities=21%  Similarity=0.291  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC--CCccc-------------------
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY--TKENI-------------------  208 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~--~~~~~-------------------  208 (284)
                      +.-+|+|+| +|..|+.|+..|+.+ |++|.+++.+.++++++++++...+.-.  .....                   
T Consensus        28 ~pa~VvViG-aGvaG~~Aa~~A~~l-GA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          28 PPARVLVFG-VGVAGLQAIATAKRL-GAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred             CCcEEEEEc-CcHHHHHHHHHHHHc-CCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHH
Confidence            456899999 899999999999997 9999999999999999999886543110  00000                   


Q ss_pred             ---ccCCCcccEEEeCCC---C------cHHHHHhhccCCEEEEEc
Q 023273          209 ---EDLPEKFDVVFDAVG---Q------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       209 ---~~~~~~~d~vid~~g---~------~~~~~~~l~~~G~~v~~g  242 (284)
                         .+.....|+||-++-   .      .+.+++.|++++.+|.+.
T Consensus       106 ~~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDva  151 (183)
T d1l7da1         106 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA  151 (183)
T ss_dssp             HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred             HHHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEe
Confidence               001246999999863   1      289999999999999983

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.99  E-value=2.3e-05  Score=61.77  Aligned_cols=98  Identities=22%  Similarity=0.275  Sum_probs=68.7

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCcEE--eeCCCcccccCCCc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADLA--IDYTKENIEDLPEK  214 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~~--~~~~~~~~~~~~~~  214 (284)
                      .++..++++|++||-+| + +.|..++.+|+..+ ..+|+.++.+++..+.+++    .+...+  +..+..........
T Consensus        67 ~l~~l~l~~g~~VLdiG-~-GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~~~~~~  144 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIG-G-GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSP  144 (213)
T ss_dssp             HHHHTTCCTTCEEEEEC-C-TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCC
T ss_pred             HHHhhhccccceEEEec-C-ccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHccccccc
Confidence            45778899999999999 3 44888888988752 3579999999988877754    333222  22221111112356


Q ss_pred             ccEEEeCCC--C-cHHHHHhhccCCEEEEE
Q 023273          215 FDVVFDAVG--Q-CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       215 ~d~vid~~g--~-~~~~~~~l~~~G~~v~~  241 (284)
                      ||+|+.+.+  . ++..++.|+++|+++..
T Consensus       145 fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         145 YDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             EEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             hhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            999988765  2 58889999999999874

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.90  E-value=1.4e-05  Score=63.03  Aligned_cols=97  Identities=16%  Similarity=0.244  Sum_probs=70.3

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcEEeeCCCcccc--cCCCcc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYTKENIE--DLPEKF  215 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~--~~~~~~  215 (284)
                      .++...+++|++||.+|  ++.|..++.+|+.. +.+|+.++..++-.+.++    +++.+++.-...+-..  .....|
T Consensus        70 ml~~L~l~~g~~VLeIG--sGsGY~taila~l~-g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~~pf  146 (215)
T d1jg1a_          70 MLEIANLKPGMNILEVG--TGSGWNAALISEIV-KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPY  146 (215)
T ss_dssp             HHHHHTCCTTCCEEEEC--CTTSHHHHHHHHHH-CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred             HHHhhccCccceEEEec--CCCChhHHHHHHhh-CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCCcccCcc
Confidence            46778999999999998  57788899999875 778999999887665554    4564433222111111  124579


Q ss_pred             cEEEeCCCC---cHHHHHhhccCCEEEEE
Q 023273          216 DVVFDAVGQ---CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       216 d~vid~~g~---~~~~~~~l~~~G~~v~~  241 (284)
                      |.|+-+.+.   +...++.|+++|+++..
T Consensus       147 D~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         147 DVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             EEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             eeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence            999876552   68899999999999975

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.74  E-value=7.7e-05  Score=59.03  Aligned_cols=103  Identities=19%  Similarity=0.233  Sum_probs=70.8

Q ss_pred             hHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC--c--EEeeCCCc-ccc
Q 023273          135 ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA--D--LAIDYTKE-NIE  209 (284)
Q Consensus       135 ~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~--~--~~~~~~~~-~~~  209 (284)
                      +...|. .++...+++|++||-+|+  +.|..++.+|+.  +.+|+.++.+++..+.+++.-.  .  .++..+.. .++
T Consensus        56 p~~~a~-ml~~L~l~~g~~VLdIG~--GsGy~ta~La~l--~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~  130 (224)
T d1vbfa_          56 LNLGIF-MLDELDLHKGQKVLEIGT--GIGYYTALIAEI--VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE  130 (224)
T ss_dssp             HHHHHH-HHHHTTCCTTCEEEEECC--TTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG
T ss_pred             hhhHHH-HHHHhhhcccceEEEecC--CCCHHHHHHHHH--hcccccccccHHHHHHHHHHHhcccccccccCchhhcch
Confidence            333343 457789999999999993  477888888875  6789999999998888765321  1  22222111 122


Q ss_pred             cCCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcC
Q 023273          210 DLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       210 ~~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~  243 (284)
                      + ...||.|+-+.+.   +...+++|+++|++|..-+
T Consensus       131 ~-~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~pvg  166 (224)
T d1vbfa_         131 E-EKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (224)
T ss_dssp             G-GCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             h-hhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEEEc
Confidence            2 3469998876542   5888999999999998643

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.73  E-value=4.5e-05  Score=58.93  Aligned_cols=76  Identities=22%  Similarity=0.194  Sum_probs=55.8

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-c----C-CcEEeeCCC-cccccCCCcccEEEe
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-L----G-ADLAIDYTK-ENIEDLPEKFDVVFD  220 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~----g-~~~~~~~~~-~~~~~~~~~~d~vid  220 (284)
                      --.|++++|+|++|++|..+++.+... |++|+++.+++++.+.+.+ +    . .....|..+ ....+.-+++|++|+
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin   98 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT   98 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhh-ccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeee
Confidence            458999999999999999999888884 9999999999988866643 1    1 122233222 233444578999999


Q ss_pred             CCCC
Q 023273          221 AVGQ  224 (284)
Q Consensus       221 ~~g~  224 (284)
                      ++|.
T Consensus        99 ~Ag~  102 (191)
T d1luaa1          99 AGAI  102 (191)
T ss_dssp             CCCT
T ss_pred             cCcc
Confidence            9873

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=0.00018  Score=57.66  Aligned_cols=74  Identities=26%  Similarity=0.321  Sum_probs=53.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEe--eCCCc-ccc---cCCCcccEEEeC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAI--DYTKE-NIE---DLPEKFDVVFDA  221 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~--~~~~~-~~~---~~~~~~d~vid~  221 (284)
                      -.|+++||+|+++++|.+.++..... |++|+++++++++++.+. +++....+  |-.+. ..+   +.-+.+|+++++
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn   83 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHAT-GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence            37899999999999999998888774 999999999999887664 55433332  22211 111   113579999999


Q ss_pred             CC
Q 023273          222 VG  223 (284)
Q Consensus       222 ~g  223 (284)
                      +|
T Consensus        84 Ag   85 (244)
T d1pr9a_          84 AA   85 (244)
T ss_dssp             CC
T ss_pred             cc
Confidence            87

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.55  E-value=0.00025  Score=58.30  Aligned_cols=96  Identities=15%  Similarity=0.243  Sum_probs=66.4

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcEEeeCCCcccccCCCcccEE
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~d~v  218 (284)
                      ++.+++++|++||-+| | +.|-.+..+|+.. |++++.++.+++..+.++    +.|....+.....+.....+.||.|
T Consensus        54 ~~~l~l~~G~~VLDiG-C-G~G~~~~~~a~~~-g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~fD~i  130 (291)
T d1kpia_          54 LDKLNLEPGMTLLDIG-C-GWGSTMRHAVAEY-DVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRI  130 (291)
T ss_dssp             HHTTCCCTTCEEEEET-C-TTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEE
T ss_pred             HHhcCCCCCCEEEEec-C-cchHHHHHHHHhc-CcceeeccchHHHHHHHHHHHHhhccchhhhhhhhcccccccccceE
Confidence            3678999999999999 3 4555677888884 999999999999866654    4453222222122233445679988


Q ss_pred             Ee-----CCCC-------------cHHHHHhhccCCEEEEE
Q 023273          219 FD-----AVGQ-------------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       219 id-----~~g~-------------~~~~~~~l~~~G~~v~~  241 (284)
                      +.     .+++             ++.+.++|+|+|++++-
T Consensus       131 ~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~  171 (291)
T d1kpia_         131 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH  171 (291)
T ss_dssp             EEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEE
T ss_pred             eechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEE
Confidence            64     2332             25688999999999864

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=97.51  E-value=0.00013  Score=57.87  Aligned_cols=91  Identities=18%  Similarity=0.271  Sum_probs=68.7

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC---
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG---  223 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g---  223 (284)
                      ...++.+||-+| || .|..+..+++.  +++|++++.+++.++.+++.+....+..+..+++-..+.+|+|+....   
T Consensus        39 ~~~~~~~vLDiG-cG-~G~~~~~l~~~--~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~l~~~~~~fD~ii~~~~~~~  114 (246)
T d2avna1          39 YLKNPCRVLDLG-GG-TGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLS  114 (246)
T ss_dssp             HCCSCCEEEEET-CT-TCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHH
T ss_pred             hcCCCCEEEEEC-CC-Cchhccccccc--ceEEEEeecccccccccccccccccccccccccccccccccceeeecchhh
Confidence            355788999998 44 78888888874  889999999999999999877655555544444433567999987543   


Q ss_pred             ---C----cHHHHHhhccCCEEEEE
Q 023273          224 ---Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       224 ---~----~~~~~~~l~~~G~~v~~  241 (284)
                         +    ++.+.+.|+++|.+++.
T Consensus       115 ~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         115 YVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             HCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhhhHHHHHHHHHhhcCcCcEEEEE
Confidence               2    25677899999999864

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.51  E-value=0.00026  Score=58.01  Aligned_cols=96  Identities=16%  Similarity=0.205  Sum_probs=67.9

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcEEeeCCCcccccCCCcccEE
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~d~v  218 (284)
                      ++..++++|++||-+|  .+.|..++.+|+.. |++|+.++.+++..+.+++    .|...-+.....++....+.+|.|
T Consensus        55 ~~~l~l~~G~~VLDiG--CG~G~~a~~~a~~~-g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~fD~i  131 (285)
T d1kpga_          55 LGKLGLQPGMTLLDVG--CGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRI  131 (285)
T ss_dssp             HTTTTCCTTCEEEEET--CTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEE
T ss_pred             HHHcCCCCCCEEEEec--CcchHHHHHHHhcC-CcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhhcccccccce
Confidence            3678999999999999  35677888889985 9999999999998877754    231111111122334445678877


Q ss_pred             Ee-----CCCC------cHHHHHhhccCCEEEEE
Q 023273          219 FD-----AVGQ------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       219 id-----~~g~------~~~~~~~l~~~G~~v~~  241 (284)
                      +.     .++.      ++.+.+.|+++|++++-
T Consensus       132 ~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~  165 (285)
T d1kpga_         132 VSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLH  165 (285)
T ss_dssp             EEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred             eeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEE
Confidence            54     3442      26788899999999863

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.51  E-value=0.00019  Score=57.50  Aligned_cols=73  Identities=26%  Similarity=0.375  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEE-eeCCC-cccccC-------CCcccEEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLA-IDYTK-ENIEDL-------PEKFDVVF  219 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~-~~~~~-~~~~~~-------~~~~d~vi  219 (284)
                      .|+++||+|+++++|++.++..... |++|+++++++++++.+.+ ++...+ .|-.+ +...+.       -+.+|+++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~-G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV   82 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKE-GARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence            5789999999999999999888874 9999999999998877754 443322 22211 111111       34799999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +++|
T Consensus        83 nnAG   86 (242)
T d1ulsa_          83 HYAG   86 (242)
T ss_dssp             ECCC
T ss_pred             ECCc
Confidence            9987

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.50  E-value=0.00025  Score=56.74  Aligned_cols=73  Identities=22%  Similarity=0.243  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEe--eCCCc-cccc---CCCcccEEEeCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAI--DYTKE-NIED---LPEKFDVVFDAV  222 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~--~~~~~-~~~~---~~~~~d~vid~~  222 (284)
                      .|+++||+|+++++|.+.++..... |++|+++++++++++.+. ++.....+  |-.+. ...+   .-+++|++++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnA   82 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHAS-GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA   82 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECC
Confidence            5899999999999999988887774 999999999988876664 55433232  22211 1111   136799999998


Q ss_pred             C
Q 023273          223 G  223 (284)
Q Consensus       223 g  223 (284)
                      |
T Consensus        83 g   83 (242)
T d1cyda_          83 A   83 (242)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=0.00018  Score=58.68  Aligned_cols=93  Identities=22%  Similarity=0.377  Sum_probs=62.4

Q ss_pred             CCCEE-EEEcCCchHHHHHHH-HHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEeeCCCccccc----------CC
Q 023273          150 AGKSI-LVLGGAGGVGTMVIQ-LAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAIDYTKENIED----------LP  212 (284)
Q Consensus       150 ~g~~v-lI~ga~g~~G~~a~~-~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~~~~~~~~~~----------~~  212 (284)
                      .|++| ||+||++++|+++++ +++. +|.+|+++.+++++.+.+.    +.+.. .++.-+-.+..+          ..
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~-~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~   79 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRL-FSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY   79 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHH-SSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc
Confidence            36777 899999999999776 4555 5899999999998876553    33322 222221111111          13


Q ss_pred             CcccEEEeCCCCc----------------------------HHHHHhhccCCEEEEEcC
Q 023273          213 EKFDVVFDAVGQC----------------------------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       213 ~~~d~vid~~g~~----------------------------~~~~~~l~~~G~~v~~g~  243 (284)
                      +.+|++|+++|-.                            +.++..|++.|+++.++.
T Consensus        80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS  138 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS  138 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence            5799999998820                            235667788899998854

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=0.00044  Score=54.58  Aligned_cols=95  Identities=14%  Similarity=0.143  Sum_probs=64.1

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCC-----c--EEeeCCCcccccCCC
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGA-----D--LAIDYTKENIEDLPE  213 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~-----~--~~~~~~~~~~~~~~~  213 (284)
                      ..+++|++||.+|  ++.|..++.+|+..+ ..+|+.++.+++-.+.+++    .+.     .  .+...+.........
T Consensus        72 ~~l~~g~~VLdiG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~~~~~  149 (224)
T d1i1na_          72 DQLHEGAKALDVG--SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEA  149 (224)
T ss_dssp             TTSCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGC
T ss_pred             hccCCCCeEEEec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccccchhh
Confidence            3789999999999  466788888887652 3589999999887766643    221     1  111111111111134


Q ss_pred             cccEEEeCCCC---cHHHHHhhccCCEEEEEc
Q 023273          214 KFDVVFDAVGQ---CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       214 ~~d~vid~~g~---~~~~~~~l~~~G~~v~~g  242 (284)
                      .||+|+.+...   ++..++.|+++|++|..-
T Consensus       150 ~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~pv  181 (224)
T d1i1na_         150 PYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  181 (224)
T ss_dssp             CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             hhhhhhhhcchhhcCHHHHhhcCCCcEEEEEE
Confidence            69999877552   688999999999999853

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=8.4e-05  Score=57.83  Aligned_cols=92  Identities=18%  Similarity=0.217  Sum_probs=62.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC---cccccCCCcccEEEeCCCCc-
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK---ENIEDLPEKFDVVFDAVGQC-  225 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~d~vid~~g~~-  225 (284)
                      ..++|+|+||+|.+|...+..+... |.+|.++++++++.......+.+ ++.-+-   +.+.+.-.++|+||.++|.. 
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~-~~~gD~~d~~~l~~al~~~d~vi~~~g~~~   79 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDSSRLPSEGPRPAH-VVVGDVLQAADVDKTVAGQDAVIVLLGTRN   79 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCGGGSCSSSCCCSE-EEESCTTSHHHHHHHHTTCSEEEECCCCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEEcChhhcccccccccc-cccccccchhhHHHHhcCCCEEEEEeccCC
Confidence            3578999999999999999888874 99999999998886543333332 222221   22333356899999998731 


Q ss_pred             ------------HHHHHhhccC--CEEEEEcC
Q 023273          226 ------------DKALKAVKEG--GRVVSIIG  243 (284)
Q Consensus       226 ------------~~~~~~l~~~--G~~v~~g~  243 (284)
                                  ..+++.++..  .+++.++.
T Consensus        80 ~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          80 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             chhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence                        2345555544  47887754

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=97.44  E-value=0.0003  Score=55.32  Aligned_cols=96  Identities=19%  Similarity=0.280  Sum_probs=67.5

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCcccccCCCccc
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFD  216 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~d  216 (284)
                      ++.++++++++||-+| || .|..+..+++.  +.+++.++.+++-.+.+++    .+..  .++..+...++-..+.||
T Consensus         8 l~~~~l~~~~rVLDiG-cG-~G~~~~~l~~~--~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~~~~~~fD   83 (231)
T d1vl5a_           8 MQIAALKGNEEVLDVA-TG-GGHVANAFAPF--VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFH   83 (231)
T ss_dssp             HHHHTCCSCCEEEEET-CT-TCHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEE
T ss_pred             HHhcCCCCcCEEEEec-cc-CcHHHHHHHHh--CCEEEEEECCHHHHhhhhhcccccccccccccccccccccccccccc
Confidence            4678999999999999 44 67777777765  6899999999987776643    3432  233333333332246799


Q ss_pred             EEEeCCC-----C----cHHHHHhhccCCEEEEEc
Q 023273          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       217 ~vid~~g-----~----~~~~~~~l~~~G~~v~~g  242 (284)
                      +|+....     +    +..+.++|+|+|++++..
T Consensus        84 ~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          84 IVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            9986543     2    267899999999999763

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=0.00025  Score=56.98  Aligned_cols=73  Identities=26%  Similarity=0.422  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeC--CC-cccccC-------CCcccEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDY--TK-ENIEDL-------PEKFDVV  218 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~--~~-~~~~~~-------~~~~d~v  218 (284)
                      .|+++||+|+++++|.+.++..... |++|+++++++++.+.+.+ ++....+.-  .+ +...+.       -+++|++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil   83 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNS-GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   83 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6899999999999999988887774 9999999999998887754 443222221  11 111111       3579999


Q ss_pred             EeCCC
Q 023273          219 FDAVG  223 (284)
Q Consensus       219 id~~g  223 (284)
                      ++++|
T Consensus        84 VnnAG   88 (250)
T d1ydea1          84 VNNAG   88 (250)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99987

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.40  E-value=0.00039  Score=56.79  Aligned_cols=96  Identities=18%  Similarity=0.325  Sum_probs=65.5

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcEEeeCCCcccccCCCcccEE
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~d~v  218 (284)
                      ++..++++|++||-+| || .|..+..+++. .|++|+.++.+++..+.+++    .+....+.....+.....+.+|.|
T Consensus        45 ~~~l~l~~g~~VLDiG-CG-~G~~a~~~a~~-~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~~~~~~fD~i  121 (280)
T d2fk8a1          45 LDKLDLKPGMTLLDIG-CG-WGTTMRRAVER-FDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRI  121 (280)
T ss_dssp             HTTSCCCTTCEEEEES-CT-TSHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEE
T ss_pred             HHHcCCCCCCEEEEec-CC-chHHHHHHHHh-CceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhhhhhccchhhh
Confidence            3678999999999999 44 34456677877 49999999999998877754    332211111122334445679988


Q ss_pred             EeC-----CCC------cHHHHHhhccCCEEEEE
Q 023273          219 FDA-----VGQ------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       219 id~-----~g~------~~~~~~~l~~~G~~v~~  241 (284)
                      +..     ++.      ++.+.+.|+|+|++++-
T Consensus       122 ~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         122 VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             hHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence            643     331      26678999999999873

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.37  E-value=0.00026  Score=56.83  Aligned_cols=74  Identities=23%  Similarity=0.367  Sum_probs=55.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-cccccC-------CCcccEEE
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDL-------PEKFDVVF  219 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~-------~~~~d~vi  219 (284)
                      -.|+++||+|+++++|++.++..... |++|+++++++++.+.+++.+...+ .|-.+ +...+.       -+++|+++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFARE-GALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            47899999999999999988887774 9999999999888888777775432 22221 111111       35799999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +++|
T Consensus        82 nnAG   85 (248)
T d2d1ya1          82 NNAA   85 (248)
T ss_dssp             ECCC
T ss_pred             EeCc
Confidence            9987

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.33  E-value=0.00075  Score=50.59  Aligned_cols=73  Identities=16%  Similarity=0.270  Sum_probs=53.8

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHH-cCCcEEeeCCCcccccCCCcccEEE
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-LGADLAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      +++..++.++++|+|+| +|+.+.+++..++.. |+ ++.++.|+.+|.+.+.+ ++.. .++...      ...+|++|
T Consensus         8 ~l~~~~~~~~~~vlIlG-aGGaarai~~aL~~~-g~~~I~I~nR~~~ka~~L~~~~~~~-~~~~~~------~~~~DliI   78 (167)
T d1npya1           8 LIEKYHLNKNAKVIVHG-SGGMAKAVVAAFKNS-GFEKLKIYARNVKTGQYLAALYGYA-YINSLE------NQQADILV   78 (167)
T ss_dssp             HHHHTTCCTTSCEEEEC-SSTTHHHHHHHHHHT-TCCCEEEECSCHHHHHHHHHHHTCE-EESCCT------TCCCSEEE
T ss_pred             HHHHcCCCCCCeEEEEC-CCHHHHHHHHHHHHC-CCCEEEEecccHHHHHHHHHhhhhh-hhhccc------ccchhhhe
Confidence            45666777889999999 799999999888885 75 78899999998777654 4432 222211      24689999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      +|+.
T Consensus        79 NaTp   82 (167)
T d1npya1          79 NVTS   82 (167)
T ss_dssp             ECSS
T ss_pred             eccc
Confidence            9964

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.33  E-value=0.00028  Score=56.16  Aligned_cols=88  Identities=22%  Similarity=0.292  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc---cc-------cC--CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IE-------DL--PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~-------~~--~~~~d~  217 (284)
                      +|++|||+|+++++|++.++..... |++|+++++.+++...     ....+......   ..       +.  .+.+|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~-G~~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRAR-NWWVASIDVVENEEAS-----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSCCTTSS-----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCcccccc-----ccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            5899999999999999999998884 9999999876543221     11111111100   00       00  346999


Q ss_pred             EEeCCCC-----c------------------------HHHHHhhccCCEEEEEcC
Q 023273          218 VFDAVGQ-----C------------------------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       218 vid~~g~-----~------------------------~~~~~~l~~~G~~v~~g~  243 (284)
                      +++++|.     +                        +.++..|+++|+++.++.
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS  129 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGA  129 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEcc
Confidence            9999872     0                        146777889999999854

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.30  E-value=0.00025  Score=56.58  Aligned_cols=94  Identities=22%  Similarity=0.227  Sum_probs=65.3

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc---EEeeCCCcccccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~d  216 (284)
                      ...+++||++||-+|+  +.|..+..+++. .+++++.++.+++..+.+++    .|..   .....+...+ ...+.||
T Consensus        27 ~~~~l~pg~~VLDiGC--G~G~~~~~la~~-~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~-~~~~~fD  102 (245)
T d1nkva_          27 RVLRMKPGTRILDLGS--GSGEMLCTWARD-HGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-VANEKCD  102 (245)
T ss_dssp             HHTCCCTTCEEEEETC--TTCHHHHHHHHH-TCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-CCSSCEE
T ss_pred             HHcCCCCCCEEEEEcC--CCCHHHHHHHHh-cCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc-cccCcee
Confidence            6789999999999993  445567778877 48999999999988776654    3432   2222222222 1246799


Q ss_pred             EEEeCCC-----C----cHHHHHhhccCCEEEEE
Q 023273          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       217 ~vid~~g-----~----~~~~~~~l~~~G~~v~~  241 (284)
                      +|+..-.     +    +..+.+.|+|+|++++.
T Consensus       103 ~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~  136 (245)
T d1nkva_         103 VAACVGATWIAGGFAGAEELLAQSLKPGGIMLIG  136 (245)
T ss_dssp             EEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEE
T ss_pred             EEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEE
Confidence            9875432     2    26788899999999875

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=0.00024  Score=56.90  Aligned_cols=74  Identities=27%  Similarity=0.376  Sum_probs=53.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe--eCCCccc-c---cCCCcccEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTKENI-E---DLPEKFDVVFDAV  222 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~~~~-~---~~~~~~d~vid~~  222 (284)
                      -.|+++||+|+++++|.+.++..... |++|+++++++++++.+.+.......  |...... .   ....++|.++++.
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~-G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~a   82 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFARE-GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVA   82 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEecc
Confidence            36889999999999999988888874 99999999999888776654432222  2111111 1   1145899999998


Q ss_pred             C
Q 023273          223 G  223 (284)
Q Consensus       223 g  223 (284)
                      |
T Consensus        83 g   83 (245)
T d2ag5a1          83 G   83 (245)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.27  E-value=0.00043  Score=55.52  Aligned_cols=97  Identities=16%  Similarity=0.242  Sum_probs=64.2

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cC-CcEEeeCCCcccccC--CCc
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LG-ADLAIDYTKENIEDL--PEK  214 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g-~~~~~~~~~~~~~~~--~~~  214 (284)
                      +...+++||++||-.|+  +.|.++..+|+.++ ..+++.++.+++..+.+++    ++ ...+ +....++.+.  .+.
T Consensus        78 i~~l~i~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv-~~~~~Di~~~~~~~~  154 (250)
T d1yb2a1          78 IMRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRSDIADFISDQM  154 (250)
T ss_dssp             ---CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECSCTTTCCCSCC
T ss_pred             HHHcCCCCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCce-EEEEeeeecccccce
Confidence            45789999999999994  34667777777652 4689999999998888764    22 2222 1111122221  356


Q ss_pred             ccEEEeCCCC----cHHHHHhhccCCEEEEEc
Q 023273          215 FDVVFDAVGQ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       215 ~d~vid~~g~----~~~~~~~l~~~G~~v~~g  242 (284)
                      ||.|+-....    .+.+.+.|+++|+++.+.
T Consensus       155 fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         155 YDAVIADIPDPWNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             EEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             eeeeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence            9988755543    378899999999998653

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.27  E-value=0.00074  Score=54.61  Aligned_cols=99  Identities=25%  Similarity=0.281  Sum_probs=68.1

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCcEEeeCCCccc-ccC-CCc
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADLAIDYTKENI-EDL-PEK  214 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~-~~~-~~~  214 (284)
                      .+..++++||++||-.|+  +.|..++.+|+..+ +.+++.++.+++..+.+++    ++....+.....+. ... ...
T Consensus        95 Ii~~l~i~pG~~VLDiG~--GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~~~~~~~~~  172 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGV--GSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKD  172 (266)
T ss_dssp             HHHHTTCCTTCEEEEECC--TTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCS
T ss_pred             HHHhhCCCCCCEEEECCC--CCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEeccccccccccc
Confidence            457889999999999993  34777778888752 4789999999998887753    44321111111111 111 346


Q ss_pred             ccEEEeCCCC----cHHHHHhhccCCEEEEEc
Q 023273          215 FDVVFDAVGQ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       215 ~d~vid~~g~----~~~~~~~l~~~G~~v~~g  242 (284)
                      +|.|+--..+    ++.+.++|+++|+++.+.
T Consensus       173 ~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         173 VDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             EEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             eeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence            8887766655    378999999999998654

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.26  E-value=0.0005  Score=54.16  Aligned_cols=94  Identities=13%  Similarity=0.217  Sum_probs=61.8

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhc--C----CeEEEEeCChhhHHHHHHc---------CCc--EEeeCCCccc
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVF--G----ASKVAATSSTAKLDLLRSL---------GAD--LAIDYTKENI  208 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~--g----~~vi~~~~~~~~~~~~~~~---------g~~--~~~~~~~~~~  208 (284)
                      ..+++|++||.+|+  ++|..++.+++..+  |    .+|+.++..++-.+.+++.         +..  .++..+....
T Consensus        76 ~~l~~g~~VLeIGt--GsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~  153 (223)
T d1r18a_          76 DHLKPGARILDVGS--GSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG  153 (223)
T ss_dssp             TTCCTTCEEEEESC--TTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC
T ss_pred             hccCCCCeEEEecC--CCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc
Confidence            37899999999994  56777766666531  2    4799999988866665431         111  1222221111


Q ss_pred             ccCCCcccEEEeCCCC---cHHHHHhhccCCEEEEE
Q 023273          209 EDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       209 ~~~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~  241 (284)
                      ......||.|+-+.+.   ++..++.|+++|++|..
T Consensus       154 ~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         154 YPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             CGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cccccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            1113579998877652   68899999999999875

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.00065  Score=51.07  Aligned_cols=96  Identities=18%  Similarity=0.264  Sum_probs=62.1

Q ss_pred             HHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cC---CcEEeeCCCcccccCCCcc
Q 023273          141 EGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LG---ADLAIDYTKENIEDLPEKF  215 (284)
Q Consensus       141 ~al~~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g---~~~~~~~~~~~~~~~~~~~  215 (284)
                      .+++..+ ..+|++|+|+| +|+.+.+++..+..+ |.+++++.|+.+|.+.+.+ +.   ....+..+.    .....+
T Consensus         7 ~~l~~~~~~~~~k~vlIlG-aGGaarai~~al~~~-g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~----~~~~~~   80 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIG-AGGASRGVLLPLLSL-DCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE----LEGHEF   80 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG----GTTCCC
T ss_pred             HHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHhccc-ceEEEeccchHHHHHHHHHHHhhccccccccccc----cccccc
Confidence            3454333 45789999999 799999988888885 8899999999888766643 32   112222111    113569


Q ss_pred             cEEEeCCCC------cHHHHHhhccCCEEEEEc
Q 023273          216 DVVFDAVGQ------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       216 d~vid~~g~------~~~~~~~l~~~G~~v~~g  242 (284)
                      |++|+|+..      +..-...++++..++.+-
T Consensus        81 dliIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~v  113 (170)
T d1nyta1          81 DLIINATSSGISGDIPAIPSSLIHPGIYCYDMF  113 (170)
T ss_dssp             SEEEECCSCGGGTCCCCCCGGGCCTTCEEEESC
T ss_pred             ceeecccccCcccCCCCCcHHHhccCcEEEEee
Confidence            999999752      122234566666655554

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.23  E-value=0.0013  Score=53.01  Aligned_cols=99  Identities=14%  Similarity=0.137  Sum_probs=67.6

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cC---CcEE--eeCCCcccccC
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LG---ADLA--IDYTKENIEDL  211 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g---~~~~--~~~~~~~~~~~  211 (284)
                      .+...+++||++||-.|  .+.|.++..+|+..+ ..+++.++.+++..+.+++    ++   .+++  ...+.....-.
T Consensus        88 Ii~~l~i~PG~~VLE~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~~~~~  165 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAG--AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELP  165 (264)
T ss_dssp             HHHHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCC
T ss_pred             HHHHhCCCCCCEEEecC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEeccccccccc
Confidence            44678999999999998  356778888888763 3589999999998888754    11   1211  11111111111


Q ss_pred             CCcccEEEeCCCC----cHHHHHhhccCCEEEEEc
Q 023273          212 PEKFDVVFDAVGQ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       212 ~~~~d~vid~~g~----~~~~~~~l~~~G~~v~~g  242 (284)
                      ...+|.||--..+    .+.+.+.|+++|+++.+.
T Consensus       166 ~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         166 DGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence            4569987655554    378999999999998664

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.22  E-value=0.00039  Score=56.04  Aligned_cols=73  Identities=22%  Similarity=0.316  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcEE-e--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-I--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .|++++|+|+++++|++.++..... |++|+++++++++++.+ ++++.... +  |-.+ +...+.       .+.+|+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVRE-GARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHT-TEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            5889999999999999988888774 99999999998887665 56664422 2  2211 111111       357999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +++++|
T Consensus        83 lVnnAg   88 (256)
T d1k2wa_          83 LVNNAA   88 (256)
T ss_dssp             EEECCC
T ss_pred             EEeecc
Confidence            999988

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.19  E-value=0.00038  Score=55.66  Aligned_cols=74  Identities=23%  Similarity=0.271  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEe--eCCC-ccccc----C---CCccc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAI--DYTK-ENIED----L---PEKFD  216 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~--~~~~-~~~~~----~---~~~~d  216 (284)
                      -.|++++|+|+++++|++.++..... |++|+++++++++.+.+. +++.. ..+  |-.+ +...+    .   .+++|
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAE-GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH   82 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCe
Confidence            46899999999999999988887774 999999999998887664 45432 222  2211 11111    1   34799


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      ++++++|
T Consensus        83 ilinnAG   89 (244)
T d1nffa_          83 VLVNNAG   89 (244)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999988

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.00086  Score=53.51  Aligned_cols=74  Identities=18%  Similarity=0.300  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCc-EEe--eCCCc-cccc-------CCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD-LAI--DYTKE-NIED-------LPE  213 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~-~~~--~~~~~-~~~~-------~~~  213 (284)
                      -.|++++|+||++++|...+...... |++|+++++++++++.+    ++.+.. ..+  |..+. ....       ..+
T Consensus         5 l~Gkv~lITGas~GIG~~ia~~la~~-G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           5 VTGEIVLITGAGHGIGRLTAYEFAKL-KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG   83 (244)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            36899999999999999977777774 99999999999987655    344433 222  22211 1111       145


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      .+|++++++|
T Consensus        84 ~idilinnag   93 (244)
T d1yb1a_          84 DVSILVNNAG   93 (244)
T ss_dssp             CCSEEEECCC
T ss_pred             CCceeEeecc
Confidence            7999999988

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.18  E-value=0.00034  Score=56.76  Aligned_cols=74  Identities=31%  Similarity=0.489  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCC---cEEe--eCCC-cccccC-------CCc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGA---DLAI--DYTK-ENIEDL-------PEK  214 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~---~~~~--~~~~-~~~~~~-------~~~  214 (284)
                      -.|+++||+|+++++|++.++..... |++|+++++++++.+.+. ++..   ...+  |-.+ +.....       -+.
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRY-GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            36899999999999999988887774 999999999998877664 3332   2222  2111 111111       347


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++++++|
T Consensus        83 iD~lVnnAG   91 (268)
T d2bgka1          83 LDIMFGNVG   91 (268)
T ss_dssp             CCEEEECCC
T ss_pred             cceeccccc
Confidence            999999887

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.17  E-value=0.0011  Score=52.24  Aligned_cols=94  Identities=15%  Similarity=0.273  Sum_probs=65.8

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCcccccCCCcccE
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFDV  217 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~d~  217 (284)
                      ..+.++||++||-+|+  +.|..+..+++.  +.+++.++.+++-++.+++    .+..  .++.-+...++-..+.||+
T Consensus        10 ~~~~~~~~~rILDiGc--GtG~~~~~la~~--~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~   85 (234)
T d1xxla_          10 KTAECRAEHRVLDIGA--GAGHTALAFSPY--VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDI   85 (234)
T ss_dssp             HHHTCCTTCEEEEESC--TTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEE
T ss_pred             HHhCCCCCCEEEEeCC--cCcHHHHHHHHh--CCeEEEEeCChhhhhhhhhhhcccccccccccccccccccccccccce
Confidence            6789999999999994  567788888875  6799999999987776643    3322  2222222222222456999


Q ss_pred             EEeCCC-----C----cHHHHHhhccCCEEEEE
Q 023273          218 VFDAVG-----Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       218 vid~~g-----~----~~~~~~~l~~~G~~v~~  241 (284)
                      |+.+-.     +    ++.+.+.|+|+|++++.
T Consensus        86 v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~  118 (234)
T d1xxla_          86 ITCRYAAHHFSDVRKAVREVARVLKQDGRFLLV  118 (234)
T ss_dssp             EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eeeeceeecccCHHHHHHHHHHeeCCCcEEEEE
Confidence            987533     2    36788999999999876

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.16  E-value=0.00053  Score=55.11  Aligned_cols=94  Identities=26%  Similarity=0.375  Sum_probs=65.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcEE-eeCC--C-cccccC-------CCccc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-IDYT--K-ENIEDL-------PEKFD  216 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-~~~~--~-~~~~~~-------~~~~d  216 (284)
                      -.|+++||+|+++++|.+.++..... |++|+++++++++.+.+ ++++.... +..+  + ++....       -+.+|
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD   82 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGE-GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            36889999999999999988887774 99999999998887666 45664332 2111  1 111111       35799


Q ss_pred             EEEeCCCC-----c-----------------------HHHHHhhc-cCCEEEEEcC
Q 023273          217 VVFDAVGQ-----C-----------------------DKALKAVK-EGGRVVSIIG  243 (284)
Q Consensus       217 ~vid~~g~-----~-----------------------~~~~~~l~-~~G~~v~~g~  243 (284)
                      ++++++|.     +                       +.++..|+ ++|++|.++.
T Consensus        83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS  138 (253)
T d1hxha_          83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMAS  138 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred             eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccc
Confidence            99999882     0                       24566665 4799998864

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.14  E-value=0.00083  Score=53.21  Aligned_cols=70  Identities=21%  Similarity=0.356  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe-eCCCc--ccccCCCcccEEEeCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKE--NIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~--~~~~~~~~~d~vid~~g  223 (284)
                      .|+++||+|+++++|.+.++..... |++|+++++++++++   +.+...+. |-.+.  ...+.-+.+|++++++|
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~-Ga~V~~~~r~~~~l~---~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG   75 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQE-GAEVTICARNEELLK---RSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAG   75 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHH---HTCSEEEECCTTTCHHHHHHHSCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHH---hcCCcEEEcchHHHHHHHHHHhCCCcEEEeccc
Confidence            5789999999999999999888874 999999999876654   44433221 22111  11112457999999987

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.14  E-value=0.00093  Score=53.77  Aligned_cols=73  Identities=22%  Similarity=0.441  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcE-Ee--eCCCc-cccc--------CCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI--DYTKE-NIED--------LPE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-~~--~~~~~-~~~~--------~~~  213 (284)
                      .|+++||+|+++++|.+.++.+... |++|+++.+++++.+.+    ++.+... .+  |-... ....        ..+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~-G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGL-GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999988777764 99999999998876554    3444332 22  22221 1111        135


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      .+|++++++|
T Consensus        84 ~idilinnag   93 (258)
T d1ae1a_          84 KLNILVNNAG   93 (258)
T ss_dssp             CCCEEEECCC
T ss_pred             CcEEEecccc
Confidence            6899999987

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.12  E-value=0.00058  Score=54.91  Aligned_cols=73  Identities=27%  Similarity=0.359  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcE-Ee--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AI--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .|+++||+||++++|++.++..... |++|+++++++++.+.+ ++++... .+  |-.+ +...+.       -+.+|+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAA-GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            6899999999999999988888774 99999999998887665 4555322 22  2111 111111       247999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +++++|
T Consensus        83 lVnnAg   88 (254)
T d1hdca_          83 LVNNAG   88 (254)
T ss_dssp             EEECCC
T ss_pred             EEecCc
Confidence            999987

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.11  E-value=0.0011  Score=53.30  Aligned_cols=73  Identities=23%  Similarity=0.406  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcE-Ee--eCCC-ccccc--------CCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AI--DYTK-ENIED--------LPE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-~~--~~~~-~~~~~--------~~~  213 (284)
                      .|+++||+|+++++|++.++..... |++|++.++++++++.+.    +.+... .+  |-.+ +....        ...
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   85 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASL-GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   85 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999988887774 999999999988876552    334322 22  2211 11111        133


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      .+|++++++|
T Consensus        86 ~idilvnnAG   95 (259)
T d2ae2a_          86 KLNILVNNAG   95 (259)
T ss_dssp             CCCEEEECCC
T ss_pred             CceEEEECCc
Confidence            6999999988

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.09  E-value=0.00044  Score=55.22  Aligned_cols=73  Identities=25%  Similarity=0.410  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EE--eeCCC-ccccc-------CCCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LA--IDYTK-ENIED-------LPEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~--~~~~~-~~~~~-------~~~~~d~  217 (284)
                      +|++++|+||++++|.+.++..... |++|+++++++++++.+. +++.. ..  .|-.+ +...+       ..+++|+
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAAR-GAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            5889999999999999988888774 999999999998877664 44432 11  22221 11111       1458999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +++++|
T Consensus        82 lVnnAg   87 (243)
T d1q7ba_          82 LVNNAG   87 (243)
T ss_dssp             EEECCC
T ss_pred             ehhhhh
Confidence            999987

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.09  E-value=0.00038  Score=56.73  Aligned_cols=73  Identities=26%  Similarity=0.438  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcE-Ee--eCCC-cccccC-------CCcccE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AI--DYTK-ENIEDL-------PEKFDV  217 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~--~~~~-~~~~~~-------~~~~d~  217 (284)
                      .|+++||+|+++++|++.++..... |++|+++++++++++.+ ++++... .+  |-.. +...+.       -+.+|+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAE-GAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            5899999999999999988888774 99999999999888665 3555332 12  2211 111111       357999


Q ss_pred             EEeCCC
Q 023273          218 VFDAVG  223 (284)
Q Consensus       218 vid~~g  223 (284)
                      +++++|
T Consensus        83 lvnnAG   88 (276)
T d1bdba_          83 LIPNAG   88 (276)
T ss_dssp             EECCCC
T ss_pred             cccccc
Confidence            999887

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.08  E-value=0.0012  Score=54.11  Aligned_cols=73  Identities=22%  Similarity=0.374  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-----HcCCc-EEeeCCCcc---ccc-------CCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-----SLGAD-LAIDYTKEN---IED-------LPE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-----~~g~~-~~~~~~~~~---~~~-------~~~  213 (284)
                      .|+++||+||++++|.+.++..... |++|+++++++++.+.+.     +.+.. ..+..+-.+   ...       ..+
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~-Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSL-GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            5799999999999999988887774 999999999988765442     23332 222221111   111       156


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++++++|
T Consensus       103 ~iDilvnnAg  112 (294)
T d1w6ua_         103 HPNIVINNAA  112 (294)
T ss_dssp             SCSEEEECCC
T ss_pred             ccchhhhhhh
Confidence            8999999987

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.08  E-value=0.00055  Score=54.26  Aligned_cols=87  Identities=21%  Similarity=0.299  Sum_probs=57.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccc----------cc--CCCcccEE
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI----------ED--LPEKFDVV  218 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------~~--~~~~~d~v  218 (284)
                      +.+|||+||++++|.+.++..... |++|+++++++++...     ....+..+....          ..  ..+.+|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~-G~~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKN-GYTVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCchhccc-----ccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            457999999999999999888884 9999999987654221     011111111000          00  13568999


Q ss_pred             EeCCCC-----c------------------------HHHHHhhccCCEEEEEcC
Q 023273          219 FDAVGQ-----C------------------------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       219 id~~g~-----~------------------------~~~~~~l~~~G~~v~~g~  243 (284)
                      ++++|.     +                        +.++..|+++|+++.++.
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS  129 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGA  129 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEecc
Confidence            999872     0                        246777888999998854

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.07  E-value=0.00074  Score=54.27  Aligned_cols=73  Identities=22%  Similarity=0.399  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcE-EeeCC--C-cccccC-------CCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AIDYT--K-ENIEDL-------PEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-~~~~~--~-~~~~~~-------~~~  214 (284)
                      .|+++||+|+++++|++.++..... |++|+++++++++.+.+    ++.+... .+..+  + +.....       .++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~   88 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999988887774 99999999998876654    3445332 22211  1 111111       357


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++++++|
T Consensus        89 iDilvnnAG   97 (255)
T d1fmca_          89 VDILVNNAG   97 (255)
T ss_dssp             CCEEEECCC
T ss_pred             CCEeeeCCc
Confidence            999999987

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00064  Score=55.08  Aligned_cols=44  Identities=25%  Similarity=0.389  Sum_probs=38.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~  193 (284)
                      -.|+++||+||++++|++.++..... |++|+++.+++++++.+.
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~-G~~Vil~~r~~~~l~~~~   55 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKM-GAHVVVTARSKETLQKVV   55 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH
Confidence            47899999999999999988887774 999999999999887663

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=97.04  E-value=0.0018  Score=52.61  Aligned_cols=96  Identities=16%  Similarity=0.127  Sum_probs=67.2

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc---EEeeCCCcccccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~d  216 (284)
                      ....+.++++||-+| | +.|..+..+++. .+++|++++.++...+.+++    .|..   .++..+..+++-..+.||
T Consensus        61 ~~~~l~~~~~vLDiG-c-G~G~~~~~la~~-~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~~~~sfD  137 (282)
T d2o57a1          61 MTGVLQRQAKGLDLG-A-GYGGAARFLVRK-FGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYD  137 (282)
T ss_dssp             HTTCCCTTCEEEEET-C-TTSHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEE
T ss_pred             HhcCCCCCCEEEEeC-C-CCcHHHhhhhcc-CCcEEEEEeccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            457889999999999 3 366777888887 48999999999988776654    2321   233333333332246799


Q ss_pred             EEEeCCC-----C----cHHHHHhhccCCEEEEEc
Q 023273          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       217 ~vid~~g-----~----~~~~~~~l~~~G~~v~~g  242 (284)
                      +|+..-.     +    +..+.+.|+++|++++..
T Consensus       138 ~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         138 FIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEE
Confidence            9976432     2    267889999999998863

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.04  E-value=0.001  Score=53.51  Aligned_cols=73  Identities=23%  Similarity=0.330  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcE-Ee--eCCC-cccccC-------CCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AI--DYTK-ENIEDL-------PEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-~~--~~~~-~~~~~~-------~~~  214 (284)
                      .|+++||+||++++|++.++..... |++|+++++++++++.+.    +.+... .+  |-.+ +...+.       -+.
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEE-GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999988877774 999999999988876553    334322 22  2111 111111       357


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++++++|
T Consensus        83 iDilVnnaG   91 (260)
T d1zema1          83 IDFLFNNAG   91 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCeehhhhc
Confidence            999999887

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.04  E-value=0.00075  Score=54.22  Aligned_cols=91  Identities=20%  Similarity=0.255  Sum_probs=62.0

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC-cEEeeCCCcccccCCCcccEEEeC
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA-DLAIDYTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~~~~~d~vid~  221 (284)
                      ..++|++||-+| || .|..++.+++.  |.+|+.++.+++-.+.+++    .+. ..++..+.... ...+.||+|+.+
T Consensus       117 ~~~~g~~VLDiG-cG-sG~l~i~aa~~--g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~~-~~~~~fD~V~an  191 (254)
T d2nxca1         117 HLRPGDKVLDLG-TG-SGVLAIAAEKL--GGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVAN  191 (254)
T ss_dssp             HCCTTCEEEEET-CT-TSHHHHHHHHT--TCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEE
T ss_pred             hcCccCEEEEcc-cc-hhHHHHHHHhc--CCEEEEEECChHHHHHHHHHHHHcCCceeEEecccccc-ccccccchhhhc
Confidence            467999999999 44 46777766653  7899999999998877753    332 23333221111 113579999876


Q ss_pred             CC-C-----cHHHHHhhccCCEEEEEc
Q 023273          222 VG-Q-----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       222 ~g-~-----~~~~~~~l~~~G~~v~~g  242 (284)
                      .. .     .+.+.+.|+++|++++.|
T Consensus       192 i~~~~l~~l~~~~~~~LkpGG~lilSg  218 (254)
T d2nxca1         192 LYAELHAALAPRYREALVPGGRALLTG  218 (254)
T ss_dssp             CCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccHHHHHHHHHHhcCCCcEEEEEe
Confidence            44 2     267889999999998754

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00088  Score=53.88  Aligned_cols=73  Identities=25%  Similarity=0.443  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCC-cEEe----eCCC-cccccC-------C
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGA-DLAI----DYTK-ENIEDL-------P  212 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~-~~~~----~~~~-~~~~~~-------~  212 (284)
                      .|+++||+|+++++|++.++.+... |++|+++.+++++.+.+    ++.+. ..++    |-.+ ++..+.       -
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~-G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQ-GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999988888874 99999999998887665    33332 2222    2221 112111       3


Q ss_pred             CcccEEEeCCC
Q 023273          213 EKFDVVFDAVG  223 (284)
Q Consensus       213 ~~~d~vid~~g  223 (284)
                      +++|++++++|
T Consensus        88 g~iD~lVnnAg   98 (257)
T d1xg5a_          88 SGVDICINNAG   98 (257)
T ss_dssp             CCCSEEEECCC
T ss_pred             CCCCEEEeccc
Confidence            57999999987

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.02  E-value=0.0009  Score=53.62  Aligned_cols=73  Identities=16%  Similarity=0.219  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCC---cEEe--eCCC-ccccc-------CCCcc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGA---DLAI--DYTK-ENIED-------LPEKF  215 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~---~~~~--~~~~-~~~~~-------~~~~~  215 (284)
                      .|+++||+||++++|++.++..... |++|+++++++++.+.+. ++..   ...+  |-.+ +...+       .-+++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEE-GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            5899999999999999988887774 999999999988877664 3331   1222  2111 11111       13579


Q ss_pred             cEEEeCCC
Q 023273          216 DVVFDAVG  223 (284)
Q Consensus       216 d~vid~~g  223 (284)
                      |++++++|
T Consensus        84 DiLVnnAg   91 (251)
T d1zk4a1          84 STLVNNAG   91 (251)
T ss_dssp             CEEEECCC
T ss_pred             eEEEeccc
Confidence            99999987

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.02  E-value=0.0011  Score=53.16  Aligned_cols=93  Identities=27%  Similarity=0.409  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-----HHcCCcE-Ee--eCCC-cccccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-----RSLGADL-AI--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-----~~~g~~~-~~--~~~~-~~~~~~-------~~  213 (284)
                      .|+++||+|+++++|++.++.+... |++|+++++++++.+..     ++.+... .+  |-.+ +...+.       -+
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   82 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5889999999999999988888774 99999999998876543     2344332 22  2211 111111       34


Q ss_pred             cccEEEeCCCC-----c-----------------------HHHHHhhcc--CCEEEEEcC
Q 023273          214 KFDVVFDAVGQ-----C-----------------------DKALKAVKE--GGRVVSIIG  243 (284)
Q Consensus       214 ~~d~vid~~g~-----~-----------------------~~~~~~l~~--~G~~v~~g~  243 (284)
                      ++|++++++|.     +                       +.++..|.+  +|+++.++.
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S  142 (251)
T d1vl8a_          83 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS  142 (251)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccccccccc
Confidence            79999999872     0                       246677743  589998854

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.01  E-value=0.001  Score=53.59  Aligned_cols=73  Identities=22%  Similarity=0.362  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCCc-cccc----C----CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTKE-NIED----L----PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~~-~~~~----~----~~  213 (284)
                      .|+++||+|+++++|++.++..... |++|+++++++++++.+.    +.+.. ..+  |-.+. ...+    .    .+
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   85 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGF-GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   85 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence            5899999999999999988888774 999999999988876553    23322 112  22211 1111    1    34


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      .+|++++++|
T Consensus        86 ~idilvnnAG   95 (259)
T d1xq1a_          86 KLDILINNLG   95 (259)
T ss_dssp             CCSEEEEECC
T ss_pred             Cccccccccc
Confidence            6999999988

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.01  E-value=0.0025  Score=51.47  Aligned_cols=94  Identities=23%  Similarity=0.336  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC-hhhHHH----HHHcCCcEE-eeCCCcc---ccc-------CC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-TAKLDL----LRSLGADLA-IDYTKEN---IED-------LP  212 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~-~~~~~~----~~~~g~~~~-~~~~~~~---~~~-------~~  212 (284)
                      -.|+++||+||++++|.+.++..... |++|+++.++ +++.+.    +++.+.+.. +..+-.+   ...       ..
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~-Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRR-GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF   94 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence            35899999999999999988888874 9999998875 444333    345554322 2211111   111       13


Q ss_pred             CcccEEEeCCCC-----c-----------------------HHHHHhhccCCEEEEEcC
Q 023273          213 EKFDVVFDAVGQ-----C-----------------------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       213 ~~~d~vid~~g~-----~-----------------------~~~~~~l~~~G~~v~~g~  243 (284)
                      +++|+++++.|.     .                       +.++..|.++|+++.++.
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s  153 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  153 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccc
Confidence            579999998872     0                       257778888999988854

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.00099  Score=53.44  Aligned_cols=73  Identities=22%  Similarity=0.284  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcC----CcE--Ee--eCCC-cccccC-------C
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLG----ADL--AI--DYTK-ENIEDL-------P  212 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g----~~~--~~--~~~~-~~~~~~-------~  212 (284)
                      .|+++||+||++++|++.++..... |++|+++++++++.+.+. ++.    ...  .+  |-.+ +...+.       -
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLK-GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            5899999999999999998888874 999999999988876553 221    111  11  2211 111111       3


Q ss_pred             CcccEEEeCCC
Q 023273          213 EKFDVVFDAVG  223 (284)
Q Consensus       213 ~~~d~vid~~g  223 (284)
                      +++|++++++|
T Consensus        81 G~iDilVnnAg   91 (254)
T d2gdza1          81 GRLDILVNNAG   91 (254)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCcCeeccccc
Confidence            57999999998

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.95  E-value=0.0034  Score=47.09  Aligned_cols=89  Identities=20%  Similarity=0.185  Sum_probs=60.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC----------cccccCCCcccEEEe
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK----------ENIEDLPEKFDVVFD  220 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~d~vid  220 (284)
                      ++++.|+| +|.+|++.+..+... |.+|.+.++++++.+.+++.+.........          .+..+..+.+|++|-
T Consensus         1 sk~iaIiG-aG~~G~~~A~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii   78 (184)
T d1bg6a2           1 SKTYAVLG-LGNGGHAFAAYLALK-GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI   78 (184)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEE
Confidence            36899999 799999998888884 999999999999999888765322111100          011122357999999


Q ss_pred             CCCCc------HHHHHhhccCCEEEEE
Q 023273          221 AVGQC------DKALKAVKEGGRVVSI  241 (284)
Q Consensus       221 ~~g~~------~~~~~~l~~~G~~v~~  241 (284)
                      ++...      ++....+.++-.++..
T Consensus        79 ~v~~~~~~~~~~~i~~~l~~~~~iv~~  105 (184)
T d1bg6a2          79 VVPAIHHASIAANIASYISEGQLIILN  105 (184)
T ss_dssp             CSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred             EEchhHHHHHHHHhhhccCCCCEEEEe
Confidence            98752      3444455555555443

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.95  E-value=0.002  Score=51.66  Aligned_cols=72  Identities=21%  Similarity=0.290  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcEE-e--eCCC-ccccc-------CCCcc
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA-I--DYTK-ENIED-------LPEKF  215 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~-~--~~~~-~~~~~-------~~~~~  215 (284)
                      |+.+||+||++++|++.++.+... |++|+++++++++++.+    ++.+.... +  |-.+ +...+       .-+++
T Consensus         2 gKValITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKE-GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            677899999999999988877774 99999999998877655    34443321 2  2111 11111       13579


Q ss_pred             cEEEeCCC
Q 023273          216 DVVFDAVG  223 (284)
Q Consensus       216 d~vid~~g  223 (284)
                      |++++++|
T Consensus        81 DilVnnAG   88 (257)
T d2rhca1          81 DVLVNNAG   88 (257)
T ss_dssp             SEEEECCC
T ss_pred             CEEEeccc
Confidence            99999988

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.95  E-value=0.00093  Score=53.76  Aligned_cols=42  Identities=21%  Similarity=0.324  Sum_probs=36.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .|++++|+|+++++|++.++..... |++|+++++++++++.+
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~   44 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAE-GAKLSLVDVSSEGLEAS   44 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5789999999999999988887774 99999999998887655

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.93  E-value=0.0013  Score=50.02  Aligned_cols=94  Identities=14%  Similarity=0.132  Sum_probs=63.9

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC-c--EEeeCCCcccccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA-D--LAIDYTKENIEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~-~--~~~~~~~~~~~~~~~~~d  216 (284)
                      ...++++|++||-+|+  +.|..++.+|+.  +.+|+.++.+++..+.+++    .|. +  +++..+..+.....+.+|
T Consensus        27 ~~l~~~~g~~VLDiGc--GsG~~s~~lA~~--~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~~~~~~~D  102 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGC--GTGGVTLELAGR--VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDID  102 (186)
T ss_dssp             HHHCCCTTCEEEEESC--TTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEE
T ss_pred             HhcCCCCCCEEEEEEC--CeEccccccccc--ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhcccccCCcC
Confidence            4568899999999994  445566677764  6799999999998877754    442 1  233322222222246799


Q ss_pred             EEEeCCC--C----cHHHHHhhccCCEEEEE
Q 023273          217 VVFDAVG--Q----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       217 ~vid~~g--~----~~~~~~~l~~~G~~v~~  241 (284)
                      .++....  .    .+.+.+.|+++|+++..
T Consensus       103 ~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~  133 (186)
T d1l3ia_         103 IAVVGGSGGELQEILRIIKDKLKPGGRIIVT  133 (186)
T ss_dssp             EEEESCCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEEEeCccccchHHHHHHHHHhCcCCEEEEE
Confidence            8876543  2    36778899999999864

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.93  E-value=0.0013  Score=52.77  Aligned_cols=74  Identities=14%  Similarity=0.168  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcEE----eeCCCc--ccccC-------C
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLA----IDYTKE--NIEDL-------P  212 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~----~~~~~~--~~~~~-------~  212 (284)
                      .|+++||+|+++++|++.+...... |++++++.+..++.+.+.+    .+...+    .|...+  ...+.       .
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~-G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKR-NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999988887774 9999988876665544432    222222    122111  11111       3


Q ss_pred             CcccEEEeCCCC
Q 023273          213 EKFDVVFDAVGQ  224 (284)
Q Consensus       213 ~~~d~vid~~g~  224 (284)
                      +.+|++++++|.
T Consensus        83 g~iDilvnnAG~   94 (254)
T d1sbya1          83 KTVDILINGAGI   94 (254)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEeCCCC
Confidence            579999999983

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.92  E-value=0.0016  Score=52.08  Aligned_cols=73  Identities=21%  Similarity=0.369  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcE-Ee--eCCC-ccccc-------CCCc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AI--DYTK-ENIED-------LPEK  214 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-~~--~~~~-~~~~~-------~~~~  214 (284)
                      +++.+||+||++++|++.++..... |++|+++++++++++.+.    +.+... .+  |-.+ +...+       .-+.
T Consensus         9 enKvalITGas~GIG~a~a~~la~~-Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   87 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKS-VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN   87 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTT-SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            5788999999999999988887774 999999999988876553    344332 22  2211 11111       1468


Q ss_pred             ccEEEeCCC
Q 023273          215 FDVVFDAVG  223 (284)
Q Consensus       215 ~d~vid~~g  223 (284)
                      +|++++++|
T Consensus        88 iDilvnnag   96 (251)
T d2c07a1          88 VDILVNNAG   96 (251)
T ss_dssp             CCEEEECCC
T ss_pred             ceeeeeccc
Confidence            999999887

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.89  E-value=0.0015  Score=53.04  Aligned_cols=42  Identities=21%  Similarity=0.417  Sum_probs=37.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .|++++|+||++++|++.++..... |++|+++++++++++.+
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~   44 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKE-GAQVTITGRNEDRLEET   44 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5889999999999999988887774 99999999998887655

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.0017  Score=53.25  Aligned_cols=44  Identities=25%  Similarity=0.462  Sum_probs=37.9

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      .-.|+++||+||++++|.+.++..... |++|+++++++++++.+
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~-Ga~Vvi~~r~~~~l~~~   52 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLEL-GSNVVIASRKLERLKSA   52 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            357899999999999999988887774 99999999998887554

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.88  E-value=0.0013  Score=52.89  Aligned_cols=73  Identities=21%  Similarity=0.305  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-----HHcCCcE-Ee--eCCC-ccccc-------CCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-----RSLGADL-AI--DYTK-ENIED-------LPE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-----~~~g~~~-~~--~~~~-~~~~~-------~~~  213 (284)
                      .|+++||+||++++|++.++..... |++|+++++++++.+.+     ++.|... .+  |-.+ +....       .-+
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAA-GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   86 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999998888774 99999999988766443     2344332 22  2211 11111       145


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      .+|++++++|
T Consensus        87 ~iDilVnnAg   96 (260)
T d1h5qa_          87 PISGLIANAG   96 (260)
T ss_dssp             SEEEEEECCC
T ss_pred             CCcEeccccc
Confidence            7999999987

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.87  E-value=0.001  Score=53.22  Aligned_cols=73  Identities=16%  Similarity=0.308  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCC--eEEEEeCChhhHHHHHHcCCc--EEe--eCCCc-cccc----C-----CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLGAD--LAI--DYTKE-NIED----L-----PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~--~vi~~~~~~~~~~~~~~~g~~--~~~--~~~~~-~~~~----~-----~~  213 (284)
                      ..++|||+||++++|++.++..... |+  +|+...++.++.+.+++....  .++  |-.+. ....    +     ..
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~-G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKD-KNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTC-TTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHC-CCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            3589999999999999988776653 64  688889999998888765432  222  22211 1111    1     23


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++++++|
T Consensus        81 ~idilinnAG   90 (250)
T d1yo6a1          81 GLSLLINNAG   90 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CeEEEEEcCc
Confidence            5999999988

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.84  E-value=0.0013  Score=52.21  Aligned_cols=95  Identities=29%  Similarity=0.376  Sum_probs=65.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcEE-e--eCCC-cccccC-------CCccc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-I--DYTK-ENIEDL-------PEKFD  216 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-~--~~~~-~~~~~~-------~~~~d  216 (284)
                      -.|+++||+|+++++|.+.++-.... |++|+++.+++++++.. ++++.+.. +  |-.. +...+.       -+.+|
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iD   81 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFARE-GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH   81 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            36899999999999999988888874 99999999999887666 45664322 2  2111 111111       25799


Q ss_pred             EEEeCCCC-----c-----------------------HHHHHhhccCCEEEEEcCC
Q 023273          217 VVFDAVGQ-----C-----------------------DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       217 ~vid~~g~-----~-----------------------~~~~~~l~~~G~~v~~g~~  244 (284)
                      ++++++|.     +                       +..+..+..++.++.++..
T Consensus        82 iLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~  137 (241)
T d2a4ka1          82 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV  137 (241)
T ss_dssp             EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC
T ss_pred             Eeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccc
Confidence            99998762     0                       2456677778887766543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.82  E-value=0.0051  Score=45.41  Aligned_cols=76  Identities=26%  Similarity=0.390  Sum_probs=54.0

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHH-HHHHcCCcEEeeCCCcccccCCCcccEEEeC
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLD-LLRSLGADLAIDYTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~  221 (284)
                      +..+--.+.+++|+| +|.+|..+++.+... |+ +++++.++.+|.. ++++++.. ..+++  ++.+....+|+||.|
T Consensus        17 ~~~~~l~~~~ilviG-aG~~g~~v~~~L~~~-g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~--~~~~~l~~~Divi~a   91 (159)
T d1gpja2          17 RELGSLHDKTVLVVG-AGEMGKTVAKSLVDR-GVRAVLVANRTYERAVELARDLGGE-AVRFD--ELVDHLARSDVVVSA   91 (159)
T ss_dssp             HHHSCCTTCEEEEES-CCHHHHHHHHHHHHH-CCSEEEEECSSHHHHHHHHHHHTCE-ECCGG--GHHHHHHTCSEEEEC
T ss_pred             HHhCCcccCeEEEEC-CCHHHHHHHHHHHhc-CCcEEEEEcCcHHHHHHHHHhhhcc-cccch--hHHHHhccCCEEEEe
Confidence            334445788999999 699999999988885 76 6888888877765 44677643 33322  222334579999999


Q ss_pred             CCC
Q 023273          222 VGQ  224 (284)
Q Consensus       222 ~g~  224 (284)
                      +++
T Consensus        92 tss   94 (159)
T d1gpja2          92 TAA   94 (159)
T ss_dssp             CSS
T ss_pred             cCC
Confidence            985

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.81  E-value=0.0011  Score=53.39  Aligned_cols=43  Identities=23%  Similarity=0.354  Sum_probs=37.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~  193 (284)
                      .|+.+||+|+++++|++.++..... |++|+++++++++++.+.
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~   46 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFARE-GAKVTITGRHAERLEETR   46 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH
Confidence            6889999999999999988877774 999999999988876653

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.77  E-value=0.0018  Score=51.98  Aligned_cols=95  Identities=27%  Similarity=0.327  Sum_probs=63.2

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHH----HHHcCCcE-EeeCCCcc---ccc-------C
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDL----LRSLGADL-AIDYTKEN---IED-------L  211 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~----~~~~g~~~-~~~~~~~~---~~~-------~  211 (284)
                      +-.|+++||+||++++|.+.++..... |++|++..+ ++++.+.    +++.|.+. .+..+-.+   ..+       .
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~-G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRR-GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            457999999999999999988887774 999998765 4444433    34556432 23222111   111       1


Q ss_pred             CCcccEEEeCCCC-----c-----------------------HHHHHhhccCCEEEEEcC
Q 023273          212 PEKFDVVFDAVGQ-----C-----------------------DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       212 ~~~~d~vid~~g~-----~-----------------------~~~~~~l~~~G~~v~~g~  243 (284)
                      .+++|++++++|.     .                       +.++..|+++|+++.+..
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s  141 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSS  141 (259)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccc
Confidence            3479999999882     0                       257777888888887743

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.75  E-value=0.014  Score=40.20  Aligned_cols=89  Identities=13%  Similarity=0.127  Sum_probs=60.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh--hHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc--
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC--  225 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~--  225 (284)
                      .|.+|+|+| .|.+|..-++.+... |+++++++....  ...++ +.+.-..+.....  ..--.++++++.++++.  
T Consensus        11 ~~k~vlVvG-~G~va~~ka~~ll~~-ga~v~v~~~~~~~~~~~~~-~~~~i~~~~~~~~--~~dl~~~~lv~~at~d~~~   85 (113)
T d1pjqa1          11 RDRDCLIVG-GGDVAERKARLLLEA-GARLTVNALTFIPQFTVWA-NEGMLTLVEGPFD--ETLLDSCWLAIAATDDDTV   85 (113)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHT-TBEEEEEESSCCHHHHHHH-TTTSCEEEESSCC--GGGGTTCSEEEECCSCHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEeccCChHHHHHH-hcCCceeeccCCC--HHHhCCCcEEeecCCCHHH
Confidence            578999999 899999999999884 999998876332  22332 2222222322111  11135789999998863  


Q ss_pred             -HHHHHhhccCCEEEEEcC
Q 023273          226 -DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       226 -~~~~~~l~~~G~~v~~g~  243 (284)
                       ....+..++.|.+|-+..
T Consensus        86 n~~i~~~a~~~~ilVNv~D  104 (113)
T d1pjqa1          86 NQRVSDAAESRRIFCNVVD  104 (113)
T ss_dssp             HHHHHHHHHHTTCEEEETT
T ss_pred             HHHHHHHHHHcCCEEEeCC
Confidence             567778888898887654

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.72  E-value=0.0021  Score=51.69  Aligned_cols=73  Identities=22%  Similarity=0.376  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh-hHH----HHHHcCCcEE-e--eCCC-cccccC-------CC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLD----LLRSLGADLA-I--DYTK-ENIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~----~~~~~g~~~~-~--~~~~-~~~~~~-------~~  213 (284)
                      .|++++|+||++++|++.++..... |++|+++.++.+ +.+    .+++.+.+.. +  |-.+ +...+.       .+
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   84 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATE-KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            6889999999999999988777774 999999998754 333    3344554322 2  2211 111111       35


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++++++|
T Consensus        85 ~iDiLVnnAG   94 (261)
T d1geea_          85 KLDVMINNAG   94 (261)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEeeccce
Confidence            7999999987

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.71  E-value=0.0031  Score=50.36  Aligned_cols=73  Identities=21%  Similarity=0.277  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcEEeeCCCc---ccccC-------CC
Q 023273          150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYTKE---NIEDL-------PE  213 (284)
Q Consensus       150 ~g~~vlI~ga~g--~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~---~~~~~-------~~  213 (284)
                      .|+++||+||+|  ++|++.++..... |++|++..++++..+.++    ..+....+..+-.   +....       .+
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~-Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEA-GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence            689999999877  8999988877774 999999888876554443    2333333332211   11111       35


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      ++|++++++|
T Consensus        86 ~iDilVnnag   95 (256)
T d1ulua_          86 GLDYLVHAIA   95 (256)
T ss_dssp             SEEEEEECCC
T ss_pred             CceEEEeccc
Confidence            7999999876

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.70  E-value=0.0029  Score=50.41  Aligned_cols=73  Identities=23%  Similarity=0.401  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh--HHHHHHcCCcEE-e--eCCC-cccccC-------CCccc
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK--LDLLRSLGADLA-I--DYTK-ENIEDL-------PEKFD  216 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~--~~~~~~~g~~~~-~--~~~~-~~~~~~-------~~~~d  216 (284)
                      .|+++||+|+++++|.+.++..... |++|++.++++++  ...+++.+.... +  |-.+ +.....       -+++|
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   82 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVE-GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999988888774 9999999986543  233456664322 2  2211 111111       35799


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      ++++++|
T Consensus        83 ilVnnAG   89 (247)
T d2ew8a1          83 ILVNNAG   89 (247)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.70  E-value=0.0011  Score=49.86  Aligned_cols=90  Identities=19%  Similarity=0.217  Sum_probs=60.4

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cC---CcEEeeCCCcccccCCCcccEEEeCCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LG---ADLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g---~~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      ..++++|+|+| +|+.+.+++..+.. ++.+++++.|+.++.+.+.+ +.   ....+..+.    .....+|++|+|+.
T Consensus        15 ~~~~k~vlIlG-aGGaarai~~aL~~-~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~----~~~~~~diiIN~tp   88 (171)
T d1p77a1          15 LRPNQHVLILG-AGGATKGVLLPLLQ-AQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS----IPLQTYDLVINATS   88 (171)
T ss_dssp             CCTTCEEEEEC-CSHHHHTTHHHHHH-TTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG----CCCSCCSEEEECCC
T ss_pred             CCCCCEEEEEC-CcHHHHHHHHHHcc-cCceeeeccchHHHHHHHHHHHhhccccchhhhcc----ccccccceeeeccc
Confidence            45788999999 89999998888777 57899999999988776643 32   212222211    11467999999986


Q ss_pred             C------cHHHHHhhccCCEEEEEcC
Q 023273          224 Q------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       224 ~------~~~~~~~l~~~G~~v~~g~  243 (284)
                      .      .....+.++++..++.+-.
T Consensus        89 ~g~~~~~~~~~~~~~~~~~~~~D~vy  114 (171)
T d1p77a1          89 AGLSGGTASVDAEILKLGSAFYDMQY  114 (171)
T ss_dssp             C-------CCCHHHHHHCSCEEESCC
T ss_pred             ccccccccchhhhhhcccceeeeeec
Confidence            3      1223445666776666554

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.67  E-value=0.0041  Score=49.64  Aligned_cols=71  Identities=23%  Similarity=0.331  Sum_probs=48.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcE-Ee--eCCC-ccccc-------CCCccc
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI--DYTK-ENIED-------LPEKFD  216 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-~~--~~~~-~~~~~-------~~~~~d  216 (284)
                      +.+||+|+++++|++.++..... |++|+++++++++.+.+    ++.+... .+  |-.+ +....       .-+++|
T Consensus         2 KValITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKD-GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            34699999999999988877774 99999999998887655    3444332 22  2211 11111       135799


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      ++++++|
T Consensus        81 ilVnnAG   87 (255)
T d1gega_          81 VIVNNAG   87 (255)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999987

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.0025  Score=49.99  Aligned_cols=94  Identities=13%  Similarity=0.048  Sum_probs=64.0

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-----------------------e
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-----------------------I  201 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-----------------------~  201 (284)
                      ...+.++.+||..| || .|..+..+|+.  |++|+.++.+++-++.+++......                       +
T Consensus        40 ~l~~~~~~rvLd~G-CG-~G~~a~~LA~~--G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          40 FLKGKSGLRVFFPL-CG-KAVEMKWFADR--GHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHTTCCSCEEEETT-CT-TCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             hcCCCCCCEEEEeC-CC-CcHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            35678899999999 44 48888888885  8999999999999888765322110                       1


Q ss_pred             eCCCcccc-cCCCcccEEEeCCC--C---------cHHHHHhhccCCEEEEEc
Q 023273          202 DYTKENIE-DLPEKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       202 ~~~~~~~~-~~~~~~d~vid~~g--~---------~~~~~~~l~~~G~~v~~g  242 (284)
                      ..+...+. .....+|+|+++.-  .         ...+.++|+++|++++..
T Consensus       116 ~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~  168 (229)
T d2bzga1         116 CCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCV  168 (229)
T ss_dssp             ESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEE
Confidence            11101111 12456899998753  1         157899999999987664

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.64  E-value=0.0024  Score=48.31  Aligned_cols=95  Identities=14%  Similarity=0.066  Sum_probs=63.7

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc--EE--------eeCCC-----ccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LA--------IDYTK-----ENI  208 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~--~~--------~~~~~-----~~~  208 (284)
                      ....+.||.+||.+|+  +.|..+..+|+.  |++|++++.+++-++.+++....  ..        .+...     .++
T Consensus        14 ~~l~~~~~~rvLd~GC--G~G~~a~~la~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          14 SSLNVVPGARVLVPLC--GKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHCCCTTCEEEETTT--CCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHcCCCCCCEEEEecC--cCCHHHHHHHHc--CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            3457889999999993  567888888875  89999999999999988753211  00        00000     001


Q ss_pred             ccC----CCcccEEEeCCC--C---------cHHHHHhhccCCEEEEEc
Q 023273          209 EDL----PEKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       209 ~~~----~~~~d~vid~~g--~---------~~~~~~~l~~~G~~v~~g  242 (284)
                      .+.    ...+|+|++...  .         ...+.++|+++|++++..
T Consensus        90 ~~l~~~~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          90 FALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             SSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             cccccccccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            111    235899887543  1         256888999999987653

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.63  E-value=0.0043  Score=47.99  Aligned_cols=90  Identities=18%  Similarity=0.161  Sum_probs=62.4

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC-cEEeeCCCcccccCCCcccEEEeCC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA-DLAIDYTKENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~~~~~d~vid~~  222 (284)
                      ++++++||-+|+  +.|..+..+++.  +.++++++.+++.++.+++    .+. ...+..+...+....+.+|+|+...
T Consensus        35 l~~~~~ILDiGc--G~G~~~~~la~~--~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~~~~~fD~I~~~~  110 (226)
T d1ve3a1          35 MKKRGKVLDLAC--GVGGFSFLLEDY--GFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFID  110 (226)
T ss_dssp             CCSCCEEEEETC--TTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEES
T ss_pred             cCCCCEEEEECC--CcchhhhhHhhh--hcccccccccccchhhhhhhhccccccccccccccccccccCcCceEEEEec
Confidence            578899999993  447788888874  7899999999998877754    232 2223333333333346799988654


Q ss_pred             C--C---------cHHHHHhhccCCEEEEE
Q 023273          223 G--Q---------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       223 g--~---------~~~~~~~l~~~G~~v~~  241 (284)
                      .  .         ++.+.+.|+++|++++.
T Consensus       111 ~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         111 SIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             CGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             chhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            3  1         25688899999998765

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.63  E-value=0.0051  Score=48.51  Aligned_cols=92  Identities=22%  Similarity=0.251  Sum_probs=64.0

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CC-cEEeeCCCcccccCCCcccEE
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA-DLAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~-~~~~~~~~~~~~~~~~~~d~v  218 (284)
                      ......++.+||-+| || .|..+..+++.  +.++++++.+++-++.+++.    +. -.++..+..+++ ..+.+|+|
T Consensus        35 ~~~~~~~~~~iLDiG-cG-tG~~~~~l~~~--~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~-~~~~fD~I  109 (251)
T d1wzna1          35 KEDAKREVRRVLDLA-CG-TGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-FKNEFDAV  109 (251)
T ss_dssp             HHTCSSCCCEEEEET-CT-TCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-CCSCEEEE
T ss_pred             HHhcCCCCCEEEEeC-CC-CCccchhhccc--ceEEEEEeeccccccccccccccccccchheehhhhhcc-cccccchH
Confidence            345667788999999 45 48888888885  78999999999888877643    32 223333322222 24579999


Q ss_pred             EeCCCC------------cHHHHHhhccCCEEEE
Q 023273          219 FDAVGQ------------CDKALKAVKEGGRVVS  240 (284)
Q Consensus       219 id~~g~------------~~~~~~~l~~~G~~v~  240 (284)
                      +...+.            ++.+.++|+++|++++
T Consensus       110 ~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         110 TMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             EECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             hhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            876432            2568889999999976

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.0085  Score=44.15  Aligned_cols=92  Identities=17%  Similarity=0.203  Sum_probs=71.0

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc-
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC-  225 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~-  225 (284)
                      ..-.|++++|+| .|-+|...++.++.+ |++|++++.++-+.-++.--|... .     .+.+.....|+++-++|+. 
T Consensus        20 ~~l~Gk~v~V~G-yG~iG~g~A~~~rg~-G~~V~v~e~dp~~al~A~~dG~~v-~-----~~~~a~~~adivvtaTGn~~   91 (163)
T d1li4a1          20 VMIAGKVAVVAG-YGDVGKGCAQALRGF-GARVIITEIDPINALQAAMEGYEV-T-----TMDEACQEGNIFVTTTGCID   91 (163)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEE-C-----CHHHHTTTCSEEEECSSCSC
T ss_pred             ceecCCEEEEec-cccccHHHHHHHHhC-CCeeEeeecccchhHHhhcCceEe-e-----ehhhhhhhccEEEecCCCcc
Confidence            356899999999 999999999999995 999999999987765555445431 1     1233346689999999952 


Q ss_pred             ---HHHHHhhccCCEEEEEcCCCC
Q 023273          226 ---DKALKAVKEGGRVVSIIGSVT  246 (284)
Q Consensus       226 ---~~~~~~l~~~G~~v~~g~~~~  246 (284)
                         ..-++.|+++.-+..+|....
T Consensus        92 vI~~eh~~~MKdgaIL~N~Ghfd~  115 (163)
T d1li4a1          92 IILGRHFEQMKDDAIVCNIGHFDV  115 (163)
T ss_dssp             SBCHHHHTTCCTTEEEEECSSSTT
T ss_pred             chhHHHHHhccCCeEEEEeccccc
Confidence               788899999888887775543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.55  E-value=0.0041  Score=51.02  Aligned_cols=73  Identities=26%  Similarity=0.364  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh---------hhHHHH----HHcCCcEEeeCCCc-cccc-----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST---------AKLDLL----RSLGADLAIDYTKE-NIED-----  210 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~---------~~~~~~----~~~g~~~~~~~~~~-~~~~-----  210 (284)
                      .|+++||+|+++++|++.++..... |++|++.+++.         ++.+.+    +..+.....+..+. ...+     
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~-Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~   84 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAER-GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   84 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHH
Confidence            5889999999999999988887774 99999986543         222222    22333333333321 1111     


Q ss_pred             --CCCcccEEEeCCC
Q 023273          211 --LPEKFDVVFDAVG  223 (284)
Q Consensus       211 --~~~~~d~vid~~g  223 (284)
                        .-+++|++++++|
T Consensus        85 ~~~~G~iDiLVnNAG   99 (302)
T d1gz6a_          85 LDTFGRIDVVVNNAG   99 (302)
T ss_dssp             HHHTSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCc
Confidence              1457999999988

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.49  E-value=0.0031  Score=50.08  Aligned_cols=72  Identities=15%  Similarity=0.241  Sum_probs=47.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHH--hcCCeEEEEeCChhhHHHHHH----cCCcEEe--eCCC-ccccc---------CCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKH--VFGASKVAATSSTAKLDLLRS----LGADLAI--DYTK-ENIED---------LPE  213 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~--~~g~~vi~~~~~~~~~~~~~~----~g~~~~~--~~~~-~~~~~---------~~~  213 (284)
                      ++|||+||++++|++.++.+..  ..|++|+++.+++++.+.+++    .+...++  |-.+ +....         ..+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            5899999999999998865532  138899999999888766543    2222222  2221 11111         124


Q ss_pred             cccEEEeCCC
Q 023273          214 KFDVVFDAVG  223 (284)
Q Consensus       214 ~~d~vid~~g  223 (284)
                      .+|++++++|
T Consensus        83 ~iDiLvnNAg   92 (248)
T d1snya_          83 GLNVLFNNAG   92 (248)
T ss_dssp             CCSEEEECCC
T ss_pred             CcceEEeecc
Confidence            6999999887

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.49  E-value=0.012  Score=43.31  Aligned_cols=83  Identities=14%  Similarity=0.142  Sum_probs=55.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-cEEeeCCCcccccCCCcccEEEeCCCC------
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDAVGQ------  224 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~d~vid~~g~------  224 (284)
                      .+|.|+| .|.+|.+.+...+.. |.+|++.++++++.+.+++.+. +...+.    .+ .-+..|+||-++..      
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~-g~~V~~~d~~~~~~~~a~~~~~~~~~~~~----~~-~~~~~DiIilavp~~~~~~v   73 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRR-GHYLIGVSRQQSTCEKAVERQLVDEAGQD----LS-LLQTAKIIFLCTPIQLILPT   73 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTSCSEEESC----GG-GGTTCSEEEECSCHHHHHHH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHC-CCEEEEEECCchHHHHHHHhhccceeeee----cc-cccccccccccCcHhhhhhh
Confidence            3688999 899999888777774 9999999999999999888874 222221    11 23567888877652      


Q ss_pred             cHHHHHhhccCCEEEEE
Q 023273          225 CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       225 ~~~~~~~l~~~G~~v~~  241 (284)
                      .+.....+.++-.++.+
T Consensus        74 l~~l~~~l~~~~iv~~~   90 (165)
T d2f1ka2          74 LEKLIPHLSPTAIVTDV   90 (165)
T ss_dssp             HHHHGGGSCTTCEEEEC
T ss_pred             hhhhhhhcccccceeec
Confidence            13333444444544444

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.46  E-value=0.036  Score=39.01  Aligned_cols=70  Identities=20%  Similarity=0.224  Sum_probs=52.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeCCC---cccccC-CCcccEEEeCCCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTK---ENIEDL-PEKFDVVFDAVGQ  224 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~---~~~~~~-~~~~d~vid~~g~  224 (284)
                      .+|+|.| .|.+|...++.+... |..+++++.++++.+.+++ ++.. ++.-+.   +.+.+. -+..|.++-++.+
T Consensus         1 M~IvI~G-~G~~G~~la~~L~~~-g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~   75 (132)
T d1lssa_           1 MYIIIAG-IGRVGYTLAKSLSEK-GHDIVLIDIDKDICKKASAEIDAL-VINGDCTKIKTLEDAGIEDADMYIAVTGK   75 (132)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCSSE-EEESCTTSHHHHHHTTTTTCSEEEECCSC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHC-CCCcceecCChhhhhhhhhhhhhh-hccCcccchhhhhhcChhhhhhhcccCCc
Confidence            4789999 799999999998884 9999999999999988864 4544 333221   123333 3579999998886

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.40  E-value=0.01  Score=46.39  Aligned_cols=98  Identities=29%  Similarity=0.287  Sum_probs=66.7

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHc----CCcEEeeCCC---cccccCCC
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL----GADLAIDYTK---ENIEDLPE  213 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~----g~~~~~~~~~---~~~~~~~~  213 (284)
                      .++...++||++||=+|+  +.|..+..+|+..+ ..+|++++.+++..+.+++.    +....+..+.   ..+.....
T Consensus        65 ~l~~l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~  142 (227)
T d1g8aa_          65 GLKNFPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVP  142 (227)
T ss_dssp             TCCCCCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCC
T ss_pred             cccccccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCccccccccc
Confidence            346678999999999995  45667888888763 36899999999988877543    2122222221   12222345


Q ss_pred             cccEEEeCCCC-------cHHHHHhhccCCEEEEE
Q 023273          214 KFDVVFDAVGQ-------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       214 ~~d~vid~~g~-------~~~~~~~l~~~G~~v~~  241 (284)
                      .+|+++.....       ...+.+.|+++|+++++
T Consensus       143 ~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         143 KVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence            78888765442       26678899999999875

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.37  E-value=0.0097  Score=47.09  Aligned_cols=90  Identities=22%  Similarity=0.381  Sum_probs=58.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH----HHcCCcE-Ee--eCCC-ccccc-------CCCccc
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGADL-AI--DYTK-ENIED-------LPEKFD  216 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~----~~~g~~~-~~--~~~~-~~~~~-------~~~~~d  216 (284)
                      .+||+||++++|++.++..... |++|++.+. ++++.+.+    ++.+... .+  |-.+ +...+       ..+++|
T Consensus         3 V~lITGas~GIG~a~a~~la~~-Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKA-GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5799999999999988887774 999988754 55555444    3444321 22  2211 11111       145799


Q ss_pred             EEEeCCCC-----c-----------------------HHHHHhh--ccCCEEEEEcC
Q 023273          217 VVFDAVGQ-----C-----------------------DKALKAV--KEGGRVVSIIG  243 (284)
Q Consensus       217 ~vid~~g~-----~-----------------------~~~~~~l--~~~G~~v~~g~  243 (284)
                      ++++++|.     +                       +.++..|  +++|++|.++.
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS  138 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIAS  138 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcC
Confidence            99999872     0                       2456666  45799999864

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.36  E-value=0.015  Score=44.79  Aligned_cols=97  Identities=24%  Similarity=0.299  Sum_probs=63.0

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcEEeeCCCcc---cccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKEN---IEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~---~~~~~~~~d  216 (284)
                      ....++||++||=+|+  +.|..+..++...+..+|++++.+++..+.+++    .+-...+..+...   .......+|
T Consensus        50 ~~l~lkpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd  127 (209)
T d1nt2a_          50 HRLKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVD  127 (209)
T ss_dssp             CCCCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEE
T ss_pred             ccCCCCCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEE
Confidence            3578999999999995  345567777776544689999999998877743    3322222222111   111234577


Q ss_pred             EEEeCCCC-------cHHHHHhhccCCEEEEEc
Q 023273          217 VVFDAVGQ-------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       217 ~vid~~g~-------~~~~~~~l~~~G~~v~~g  242 (284)
                      +++.....       ...+.+.|+++|+++++-
T Consensus       128 ~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         128 LIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             EEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            77765442       256778999999998763

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.35  E-value=0.0031  Score=50.53  Aligned_cols=74  Identities=24%  Similarity=0.392  Sum_probs=48.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh-hhHHHHH-----HcCCcEE-e--eCCC-cccccC-------
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLR-----SLGADLA-I--DYTK-ENIEDL-------  211 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~~~~~-----~~g~~~~-~--~~~~-~~~~~~-------  211 (284)
                      -.|+++||+|+++++|++.++..... |++|+++.+++ ++.+.+.     +.+.... +  |-.+ +...+.       
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQ-GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            36889999999999999988777774 99999999864 4444332     2343322 2  2211 111111       


Q ss_pred             CCcccEEEeCCC
Q 023273          212 PEKFDVVFDAVG  223 (284)
Q Consensus       212 ~~~~d~vid~~g  223 (284)
                      -+++|++++++|
T Consensus        81 ~G~iDiLVnnAG   92 (260)
T d1x1ta1          81 MGRIDILVNNAG   92 (260)
T ss_dssp             HSCCSEEEECCC
T ss_pred             hCCCcEEEeecc
Confidence            357999999988

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.33  E-value=0.011  Score=46.27  Aligned_cols=127  Identities=20%  Similarity=0.210  Sum_probs=75.2

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC----CcEEeeCCC---cccccCCCcc
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG----ADLAIDYTK---ENIEDLPEKF  215 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g----~~~~~~~~~---~~~~~~~~~~  215 (284)
                      ++...++||++||=+|+  +.|..+..+|+...+..|++++.+++..+.+++.-    ....+..+.   ..+......+
T Consensus        67 l~~l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v  144 (230)
T d1g8sa_          67 LKVMPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKV  144 (230)
T ss_dssp             CCCCCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCE
T ss_pred             HHhCCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCccccccccee
Confidence            46678999999999995  44567777777633568999999999888776532    112222111   1122223345


Q ss_pred             cEEEeCCCC-------cHHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHHHHHHHHHHCCCeeE
Q 023273          216 DVVFDAVGQ-------CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA  275 (284)
Q Consensus       216 d~vid~~g~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~  275 (284)
                      |+++.....       ...+.+.|+++|+++++-........    ..-...++++.+.+++..++.
T Consensus       145 ~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~k~~~~d~~----~~~~~~~~e~~~~L~~aGF~i  207 (230)
T d1g8sa_         145 DVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVT----KDPKEIFKEQKEILEAGGFKI  207 (230)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSS----SCHHHHHHHHHHHHHHHTEEE
T ss_pred             EEeeccccchHHHHHHHHHHHHhcccCceEEEEeeccccCCC----CCHHHHHHHHHHHHHHcCCEE
Confidence            666665542       25678899999999876322111000    112244556666665443433

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.014  Score=48.20  Aligned_cols=99  Identities=22%  Similarity=0.221  Sum_probs=63.2

Q ss_pred             HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cC-----------CcE--EeeC
Q 023273          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LG-----------ADL--AIDY  203 (284)
Q Consensus       142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g-----------~~~--~~~~  203 (284)
                      .+...+++||++||-.| + +.|.+++.+|+.++ ..+|+.++.+++..+.+++    ++           .++  .++.
T Consensus        90 Il~~l~i~pG~rVLE~G-t-GsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~  167 (324)
T d2b25a1          90 ILSMMDINPGDTVLEAG-S-GSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK  167 (324)
T ss_dssp             HHHHHTCCTTCEEEEEC-C-TTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred             HHHHhCCCCCCEEEEec-c-cccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEec
Confidence            44678999999999998 3 45888888888862 3589999999998877753    11           111  1111


Q ss_pred             CCccc-cc-CCCcccEEEeCCCC----cHHHHHhhccCCEEEEEc
Q 023273          204 TKENI-ED-LPEKFDVVFDAVGQ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       204 ~~~~~-~~-~~~~~d~vid~~g~----~~~~~~~l~~~G~~v~~g  242 (284)
                      +-... .. ....+|.||=-..+    ...+.+.|+++|+++.+.
T Consensus       168 di~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         168 DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             chhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence            11111 11 12458876532332    478899999999999765

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.29  E-value=0.011  Score=43.74  Aligned_cols=92  Identities=20%  Similarity=0.162  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc----cccCCCcccEEEeCCCC-
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN----IEDLPEKFDVVFDAVGQ-  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~d~vid~~g~-  224 (284)
                      .+++|+|+| +|.+|..+++.+... |.+|++++++.++.+.+.+.............    ........|.++.+... 
T Consensus         1 ~~K~IliiG-aG~~G~~~a~~L~~~-g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~   78 (182)
T d1e5qa1           1 ATKSVLMLG-SGFVTRPTLDVLTDS-GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT   78 (182)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTT-TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGG
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccch
Confidence            368999999 699999999988874 89999999999999887654333222221111    11123467888877764 


Q ss_pred             --cHHHHHhhccCCEEEEEcC
Q 023273          225 --CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       225 --~~~~~~~l~~~G~~v~~g~  243 (284)
                        ...+..++..+-.++.+..
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~   99 (182)
T d1e5qa1          79 FHATVIKSAIRQKKHVVTTSY   99 (182)
T ss_dssp             GHHHHHHHHHHHTCEEECSSC
T ss_pred             hhhHHHHHHHhhccceeeccc
Confidence              2444555666666655543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.29  E-value=0.021  Score=41.86  Aligned_cols=92  Identities=18%  Similarity=0.176  Sum_probs=71.3

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc-
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC-  225 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~-  225 (284)
                      -.-.|++++|.| -|-+|..+++.++.+ |++|++++.+|-+.-++.--|.. +.     ...+..+..|+++-++|+. 
T Consensus        19 ~~laGk~vvV~G-YG~vGrG~A~~~rg~-Ga~V~V~E~DPi~alqA~mdGf~-v~-----~~~~a~~~aDi~vTaTGn~~   90 (163)
T d1v8ba1          19 FLISGKIVVICG-YGDVGKGCASSMKGL-GARVYITEIDPICAIQAVMEGFN-VV-----TLDEIVDKGDFFITCTGNVD   90 (163)
T ss_dssp             CCCTTSEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSCHHHHHHHHTTTCE-EC-----CHHHHTTTCSEEEECCSSSS
T ss_pred             ceecCCEEEEec-ccccchhHHHHHHhC-CCEEEEEecCchhhHHHHhcCCc-cC-----chhHccccCcEEEEcCCCCc
Confidence            346899999999 999999999999996 99999999999765555433432 21     1233356789999999962 


Q ss_pred             ---HHHHHhhccCCEEEEEcCCCC
Q 023273          226 ---DKALKAVKEGGRVVSIIGSVT  246 (284)
Q Consensus       226 ---~~~~~~l~~~G~~v~~g~~~~  246 (284)
                         ..-++.|+++.-+.-.|....
T Consensus        91 vI~~~h~~~MKdgaIl~N~GHfd~  114 (163)
T d1v8ba1          91 VIKLEHLLKMKNNAVVGNIGHFDD  114 (163)
T ss_dssp             SBCHHHHTTCCTTCEEEECSSTTT
T ss_pred             cccHHHHHHhhCCeEEEeccccch
Confidence               678899999998888876543

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.0037  Score=49.56  Aligned_cols=47  Identities=26%  Similarity=0.335  Sum_probs=39.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA  197 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~  197 (284)
                      +|+++||+||++++|.+.++..... |++|+++++++++.+.+ ++++.
T Consensus         4 kGKvalITGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~   51 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQ-GASAVLLDLPNSGGEAQAKKLGN   51 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSSHHHHHHHHCT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCC
Confidence            6899999999999999988888874 99999999988877655 45553

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.28  E-value=0.0031  Score=50.93  Aligned_cols=43  Identities=23%  Similarity=0.437  Sum_probs=37.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~  193 (284)
                      .|+++||+||++++|++.++..... |++|+++++++++++.+.
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~-Ga~V~l~~r~~~~l~~~~   46 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQE-GANVTITGRSSERLEETR   46 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH
Confidence            5789999999999999988887774 999999999998876653

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.21  E-value=0.002  Score=51.08  Aligned_cols=69  Identities=20%  Similarity=0.343  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC-ccccc-------CCCcccEEEeC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIED-------LPEKFDVVFDA  221 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~-------~~~~~d~vid~  221 (284)
                      .|+++||+||++++|++.++..... |++|+++++++++.+.+..    ...|-.+ +...+       ..+.+|+++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~----~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn   80 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAAD-GHKVAVTHRGSGAPKGLFG----VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   80 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSSCCCTTSEE----EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCcchhcCceE----EEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence            6899999999999999998888874 9999999998765542211    1122211 11111       13479999999


Q ss_pred             CC
Q 023273          222 VG  223 (284)
Q Consensus       222 ~g  223 (284)
                      +|
T Consensus        81 AG   82 (237)
T d1uzma1          81 AG   82 (237)
T ss_dssp             CS
T ss_pred             ec
Confidence            87

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.19  E-value=0.0075  Score=48.36  Aligned_cols=74  Identities=19%  Similarity=0.173  Sum_probs=48.4

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH---HcC-CcEEe--eCCCc-cccc-------CC
Q 023273          149 SAGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTAKLDLLR---SLG-ADLAI--DYTKE-NIED-------LP  212 (284)
Q Consensus       149 ~~g~~vlI~ga~g--~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~---~~g-~~~~~--~~~~~-~~~~-------~~  212 (284)
                      -.|+++||+|++|  ++|.+.++.+... |++|+++.++++..+.++   +.+ ...++  +...+ ...+       ..
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~-Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            4689999999876  7999988888874 999999999865443333   223 22222  21111 1111       14


Q ss_pred             CcccEEEeCCC
Q 023273          213 EKFDVVFDAVG  223 (284)
Q Consensus       213 ~~~d~vid~~g  223 (284)
                      +.+|+++.+.|
T Consensus        82 g~id~lV~nag   92 (274)
T d2pd4a1          82 GSLDFIVHSVA   92 (274)
T ss_dssp             SCEEEEEECCC
T ss_pred             CCCCeEEeecc
Confidence            67999998877

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.18  E-value=0.0017  Score=52.00  Aligned_cols=68  Identities=13%  Similarity=0.026  Sum_probs=47.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC----CcEEeeCCCcccccC-------CCcccEEEeC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG----ADLAIDYTKENIEDL-------PEKFDVVFDA  221 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~-------~~~~d~vid~  221 (284)
                      +.||+|+++++|++.+..+... |++|++.+++.++.+.++...    ...+.+.  ++..+.       -+++|+++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~-Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~--~~~~~~~~~~~~~~G~iDiLVnN   78 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEA-GHTVACHDESFKQKDELEAFAETYPQLKPMSE--QEPAELIEAVTSAYGQVDVLVSN   78 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHT-TCEEEECCGGGGSHHHHHHHHHHCTTSEECCC--CSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhhhCcEEEeccCCH--HHHHHHHHHHHHHcCCCCEEEEC
Confidence            7899999999999988777774 999999999888877765432    2222222  121111       3579999987


Q ss_pred             CC
Q 023273          222 VG  223 (284)
Q Consensus       222 ~g  223 (284)
                      +|
T Consensus        79 Ag   80 (252)
T d1zmta1          79 DI   80 (252)
T ss_dssp             CC
T ss_pred             Cc
Confidence            66

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=96.13  E-value=0.0047  Score=51.33  Aligned_cols=76  Identities=20%  Similarity=0.225  Sum_probs=53.1

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc-----CCc--EEe--eC-CCcccccCCCccc
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-----GAD--LAI--DY-TKENIEDLPEKFD  216 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~-----g~~--~~~--~~-~~~~~~~~~~~~d  216 (284)
                      -+.+|++|||+|++|-+|...+..+... |.+|++++++.++.+.++..     ...  ..+  |- +...+...-.++|
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~-G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   85 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEH-GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAA   85 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccch
Confidence            4577999999999999999998887774 99999999987776655421     111  112  11 2223444457899


Q ss_pred             EEEeCCC
Q 023273          217 VVFDAVG  223 (284)
Q Consensus       217 ~vid~~g  223 (284)
                      .++.+.+
T Consensus        86 ~v~~~a~   92 (342)
T d1y1pa1          86 GVAHIAS   92 (342)
T ss_dssp             EEEECCC
T ss_pred             hhhhhcc
Confidence            9998765

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=96.12  E-value=0.013  Score=47.01  Aligned_cols=94  Identities=13%  Similarity=0.141  Sum_probs=66.4

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc-EEeeCCCcccccCCCcccEEEeCCC--
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPEKFDVVFDAVG--  223 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~d~vid~~g--  223 (284)
                      ...++.+||-+|+  +.|..+..+++...+.+++.++.+++.++.+++.... ..+..+...++-..+.+|+|+....  
T Consensus        81 ~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l~~~~~sfD~v~~~~~~~  158 (268)
T d1p91a_          81 LDDKATAVLDIGC--GEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPC  158 (268)
T ss_dssp             SCTTCCEEEEETC--TTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCCC
T ss_pred             cCCCCCEEEEeCC--CCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhccCCCCCEEEEeecCCHH
Confidence            3467789999983  4567777777764467899999999998888765432 2222232333333467999987644  


Q ss_pred             CcHHHHHhhccCCEEEEEc
Q 023273          224 QCDKALKAVKEGGRVVSII  242 (284)
Q Consensus       224 ~~~~~~~~l~~~G~~v~~g  242 (284)
                      ....+.+.|+++|++++..
T Consensus       159 ~~~e~~rvLkpgG~l~~~~  177 (268)
T d1p91a_         159 KAEELARVVKPGGWVITAT  177 (268)
T ss_dssp             CHHHHHHHEEEEEEEEEEE
T ss_pred             HHHHHHHHhCCCcEEEEEe
Confidence            3688999999999999873

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.02  Score=46.80  Aligned_cols=92  Identities=22%  Similarity=0.215  Sum_probs=57.3

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHH---HHHHcCC---cEEeeCCCcccccCCCcccEE
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD---LLRSLGA---DLAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~---~~~~~g~---~~~~~~~~~~~~~~~~~~d~v  218 (284)
                      .....++++||.+| +| .|+.++.+|++ +..+|++++.++.-..   ..+..+.   ..+++.+..++....+.+|+|
T Consensus        30 ~~~~~~~~~VLDiG-cG-~G~lsl~aa~~-Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~D~I  106 (311)
T d2fyta1          30 NPHIFKDKVVLDVG-CG-TGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVI  106 (311)
T ss_dssp             CGGGTTTCEEEEET-CT-TSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEE
T ss_pred             ccccCCcCEEEEEC-CC-CCHHHHHHHHc-CCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcCccccceEE
Confidence            34667899999999 44 67778888886 4568999998775332   2233332   233443333333335689999


Q ss_pred             EeC-CCC-------c----HHHHHhhccCCEEE
Q 023273          219 FDA-VGQ-------C----DKALKAVKEGGRVV  239 (284)
Q Consensus       219 id~-~g~-------~----~~~~~~l~~~G~~v  239 (284)
                      +.. .+.       +    ...-+.|+++|+++
T Consensus       107 vse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1         107 ISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             EECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             EEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            853 221       1    22345799999986

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.97  E-value=0.014  Score=46.25  Aligned_cols=75  Identities=24%  Similarity=0.304  Sum_probs=48.7

Q ss_pred             cCCCCEEEEEcCCc--hHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcEEeeCCCccc----------ccC
Q 023273          148 FSAGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENI----------EDL  211 (284)
Q Consensus       148 ~~~g~~vlI~ga~g--~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~----------~~~  211 (284)
                      .-.|+++||+|++|  ++|.+.+..... .|++|++..++++..+.+.+    .+....+..+..+.          ...
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~-~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHR-EGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHH-TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            34789999999888  788887777776 49999999998776655533    33322222211111          111


Q ss_pred             CCcccEEEeCCC
Q 023273          212 PEKFDVVFDAVG  223 (284)
Q Consensus       212 ~~~~d~vid~~g  223 (284)
                      ....|+.+++++
T Consensus        81 ~~~~d~~v~~a~   92 (258)
T d1qsga_          81 WPKFDGFVHSIG   92 (258)
T ss_dssp             CSSEEEEEECCC
T ss_pred             ccccceEEEeec
Confidence            456888888765

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.97  E-value=0.0073  Score=47.59  Aligned_cols=87  Identities=20%  Similarity=0.195  Sum_probs=58.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC-cEEeeCCCcccccCCCcccEEEeCCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA-DLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      .++++||-+| || .|..+..+++.  +.+++.++.+++-++.+++    .+. -.++..+-.++. ..+.+|+|+...+
T Consensus        36 ~~~~~vLDiG-CG-~G~~~~~l~~~--g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~i~~~~~  110 (246)
T d1y8ca_          36 LVFDDYLDLA-CG-TGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-INRKFDLITCCLD  110 (246)
T ss_dssp             CCTTEEEEET-CT-TSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-CSCCEEEEEECTT
T ss_pred             CCCCeEEEEe-Cc-CCHHHHHHHHh--CCccEeeccchhhhhhccccccccCccceeeccchhhhc-ccccccccceeee
Confidence            4567899999 44 67778888875  7899999999998877754    332 223332222222 2467999986533


Q ss_pred             C-------------cHHHHHhhccCCEEEE
Q 023273          224 Q-------------CDKALKAVKEGGRVVS  240 (284)
Q Consensus       224 ~-------------~~~~~~~l~~~G~~v~  240 (284)
                      .             ++.+.++|+++|.+++
T Consensus       111 ~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         111 STNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             GGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             eeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            2             1467788899999885

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.90  E-value=0.0054  Score=48.06  Aligned_cols=91  Identities=18%  Similarity=0.231  Sum_probs=60.6

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc-----EEeeCCCcc-cccC-CCcccEE-E
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-----LAIDYTKEN-IEDL-PEKFDVV-F  219 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~-----~~~~~~~~~-~~~~-~~~~d~v-i  219 (284)
                      ..+|++||-+|  .+.|..+..+++. .+.++++++.+++-.+.+++....     ..+...... .... .+.+|.+ +
T Consensus        51 ~~~g~~VLdIG--cG~G~~a~~~a~~-~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~f  127 (229)
T d1zx0a1          51 SSKGGRVLEVG--FGMAIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY  127 (229)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHHTS-CEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred             ccCCCeEEEee--ccchHHHHHHHHc-CCCeEEEeCCCHHHHHHHHHHhhhcccccccccccccccccccccccccceee
Confidence            46889999998  4667788888887 467899999999999888764321     111111111 1111 3568887 4


Q ss_pred             eCCCC-------------cHHHHHhhccCCEEEEE
Q 023273          220 DAVGQ-------------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       220 d~~g~-------------~~~~~~~l~~~G~~v~~  241 (284)
                      |....             .+.+.+.|+++|+++..
T Consensus       128 D~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         128 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             cccccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            65431             14577899999999864

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.87  E-value=0.016  Score=43.90  Aligned_cols=89  Identities=21%  Similarity=0.244  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcE--EeeCCCcccccCCCcccEEEeCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      ++.+||-+| || .|..+..+++.  |.++++++.+++.++.+++    .+...  ....+.... ...+.||+|+...-
T Consensus        30 ~~grvLDiG-cG-~G~~~~~la~~--g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~-~~~~~fD~I~~~~~  104 (198)
T d2i6ga1          30 APGRTLDLG-CG-NGRNSLYLAAN--GYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL-TFDGEYDFILSTVV  104 (198)
T ss_dssp             CSCEEEEET-CT-TSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC-CCCCCEEEEEEESC
T ss_pred             CCCcEEEEC-CC-CCHHHHHHHHH--hhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc-cccccccEEEEeee
Confidence            344899999 54 88888888875  8999999999998876643    33321  111111111 12467999986432


Q ss_pred             --C---------cHHHHHhhccCCEEEEEcC
Q 023273          224 --Q---------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       224 --~---------~~~~~~~l~~~G~~v~~g~  243 (284)
                        .         ++.+.++|+++|.+++...
T Consensus       105 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1         105 MMFLEAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             GGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             eecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence              1         1567778999999988643

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.87  E-value=0.0086  Score=51.01  Aligned_cols=101  Identities=22%  Similarity=0.322  Sum_probs=67.1

Q ss_pred             HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHc-----------CCc---EEeeC
Q 023273          139 AYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSL-----------GAD---LAIDY  203 (284)
Q Consensus       139 a~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~-----------g~~---~~~~~  203 (284)
                      ....++..++++|++++=+|  ++.|..+.++|+.. ++ +++.++.++...+.+++.           +..   ..+..
T Consensus       205 i~~Il~~l~Lkpgd~fLDLG--CG~G~~vl~aA~~~-g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~  281 (406)
T d1u2za_         205 LSDVYQQCQLKKGDTFMDLG--SGVGNCVVQAALEC-GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL  281 (406)
T ss_dssp             HHHHHHHTTCCTTCEEEEES--CTTSHHHHHHHHHH-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred             HHHHHHHhCCCCCCEEEeCC--CCCcHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeee
Confidence            55566788999999999998  57899999999985 65 799999998877666431           110   01111


Q ss_pred             CCcc-----cccCCCcccEEEeCCC--C------cHHHHHhhccCCEEEEEc
Q 023273          204 TKEN-----IEDLPEKFDVVFDAVG--Q------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       204 ~~~~-----~~~~~~~~d~vid~~g--~------~~~~~~~l~~~G~~v~~g  242 (284)
                      ....     +...-..+|+++-..-  .      +..+.+.|++||++|.+.
T Consensus       282 ~~~f~~~~~~d~~~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         282 KKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             SSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             eechhhccccccccccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            1111     1111345788775322  1      257888999999998763

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=95.78  E-value=0.093  Score=41.33  Aligned_cols=97  Identities=13%  Similarity=0.063  Sum_probs=66.0

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC-Cc---EEeeCCCcccccCCCcccEEE
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG-AD---LAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g-~~---~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      +.....++.+||-+|  +++|..+..++... ..+|.+++.+++-++.+++.. ..   .++..+...+.-..+.+|+|+
T Consensus        87 ~~l~~~~~~~vLD~G--cG~G~~t~~ll~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I~  163 (254)
T d1xtpa_          87 ASLPGHGTSRALDCG--AGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIV  163 (254)
T ss_dssp             HTSTTCCCSEEEEET--CTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEE
T ss_pred             hhCCCCCCCeEEEec--ccCChhhHHHHhhc-CceEEEEcCCHHHHHhhhccccccccceeEEccccccccCCCccceEE
Confidence            445567788999998  35688888888773 678999999999888887542 21   222222223332346799998


Q ss_pred             eCCC--C---------cHHHHHhhccCCEEEEEcC
Q 023273          220 DAVG--Q---------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       220 d~~g--~---------~~~~~~~l~~~G~~v~~g~  243 (284)
                      ..--  .         +..+.+.|+++|.+++...
T Consensus       164 ~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e~  198 (254)
T d1xtpa_         164 IQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN  198 (254)
T ss_dssp             EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eeccccccchhhhHHHHHHHHHhcCCCcEEEEEec
Confidence            6532  2         2567788999999987643

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.75  E-value=0.0065  Score=47.00  Aligned_cols=70  Identities=20%  Similarity=0.227  Sum_probs=44.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCC--eEEEEeCChhhHHHHHHcCCcEE-eeCCC-cccccCCCcccEEEeCCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~--~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~d~vid~~g  223 (284)
                      .+|||+||+|.+|...++.+... |.  .++.+.+++++...... +...+ .|..+ +.+...-+++|.++.+++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~-g~~v~v~~~~R~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   77 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEG-SDKFVAKGLVRSAQGKEKIGG-EADVFIGDITDADSINPAFQGIDALVILTS   77 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHT-TTTCEEEEEESCHHHHHHTTC-CTTEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHC-CCcEEEEEEcCCHHHHHhccC-CcEEEEeeeccccccccccccceeeEEEEe
Confidence            48999999999999999988874 64  46667777776554322 12211 12211 122223467899998765

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.70  E-value=0.026  Score=39.83  Aligned_cols=88  Identities=19%  Similarity=0.261  Sum_probs=60.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC-CC-cccccC-CCcccEEEeCCCCc---
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY-TK-ENIEDL-PEKFDVVFDAVGQC---  225 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~-~~-~~~~~~-~~~~d~vid~~g~~---  225 (284)
                      ++++|.| .|.+|..+++.+... |..+++++.++++.+.+++.+...++.. .+ +.+.+. -..+|.++-++++.   
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~-g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~~~   78 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRM-GHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQA   78 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHT-TCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHC-CCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCchHHh
Confidence            3578888 899999999999985 9999999999999999988876544432 11 112222 34688888887742   


Q ss_pred             ---HHHHHhhccCCEEEEE
Q 023273          226 ---DKALKAVKEGGRVVSI  241 (284)
Q Consensus       226 ---~~~~~~l~~~G~~v~~  241 (284)
                         -.+...+.+..+++..
T Consensus        79 ~~~~~~~~~~~~~~~iiar   97 (134)
T d2hmva1          79 STLTTLLLKELDIPNIWVK   97 (134)
T ss_dssp             HHHHHHHHHHTTCSEEEEE
T ss_pred             HHHHHHHHHHcCCCcEEee
Confidence               2233344445566543

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=95.66  E-value=0.011  Score=44.56  Aligned_cols=103  Identities=15%  Similarity=0.166  Sum_probs=61.3

Q ss_pred             HHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcC----C-cEEeeCCC-cccc
Q 023273          141 EGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLG----A-DLAIDYTK-ENIE  209 (284)
Q Consensus       141 ~al~~~~~-~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g----~-~~~~~~~~-~~~~  209 (284)
                      .+++..+. -.+.+|+|+| +|+.+.+++..+...+..+++++.+++++.+.+.    +++    . ....+..+ ..+.
T Consensus         7 ~~l~~~~~~l~~k~vlIlG-aGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   85 (182)
T d1vi2a1           7 RAIKESGFDIKGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFA   85 (182)
T ss_dssp             HHHHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH
T ss_pred             HHHHHcCCCcCCCEEEEEC-CcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchh
Confidence            34443333 3678999999 7999999888877753347778888777655432    222    1 11222221 1122


Q ss_pred             cCCCcccEEEeCCCC-c----H----HHHHhhccCCEEEEEcCC
Q 023273          210 DLPEKFDVVFDAVGQ-C----D----KALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       210 ~~~~~~d~vid~~g~-~----~----~~~~~l~~~G~~v~~g~~  244 (284)
                      .....+|++|+|+.. .    .    .-+..++++..++.+-..
T Consensus        86 ~~~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~  129 (182)
T d1vi2a1          86 EALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYN  129 (182)
T ss_dssp             HHHHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCS
T ss_pred             hhhcccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcC
Confidence            223578999999751 1    1    124567778877777543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.62  E-value=0.065  Score=39.28  Aligned_cols=85  Identities=15%  Similarity=0.107  Sum_probs=53.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcC--CeEEEEeCChhhHHHHHHcCC-cEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~d~vid~~g~-----  224 (284)
                      +|+|+| +|.+|...+..++.. +  .+|++.+++++.++.+++.+. +........   ......|+++-|+..     
T Consensus         3 ~I~IIG-~G~mG~sla~~L~~~-g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~dlIila~p~~~~~~   77 (171)
T d2g5ca2           3 NVLIVG-VGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVDLGIIDEGTTSIAK---VEDFSPDFVMLSSPVRTFRE   77 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGG---GGGTCCSEEEECSCHHHHHH
T ss_pred             EEEEEc-cCHHHHHHHHHHHhc-CCCeEEEEEECChHHHHHHHHhhcchhhhhhhhh---hhccccccccccCCchhhhh
Confidence            699999 899999988887774 5  478899999999999998874 333322111   112346666666541     


Q ss_pred             -cHHHHHhhccCCEEEEEc
Q 023273          225 -CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 -~~~~~~~l~~~G~~v~~g  242 (284)
                       .+.....+.++-.++.++
T Consensus        78 vl~~l~~~~~~~~ii~d~~   96 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQG   96 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECC
T ss_pred             hhhhhhccccccccccccc
Confidence             133334444444444443

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.60  E-value=0.018  Score=45.36  Aligned_cols=70  Identities=19%  Similarity=0.311  Sum_probs=46.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCe-------EEEEeCChhhHHHHH----HcCCc-EEe--eCCC-ccccc-------
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGAS-------KVAATSSTAKLDLLR----SLGAD-LAI--DYTK-ENIED-------  210 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~-------vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~-~~~~~-------  210 (284)
                      .|||+||++++|++.++..... |++       ++...+++++++.+.    +.|.. ..+  |-.+ +...+       
T Consensus         3 VvlITGas~GIG~aia~~la~~-G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARA-ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHH-TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHh-CccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3689999999999988776664 876       888889888876553    33432 122  2221 11111       


Q ss_pred             CCCcccEEEeCCC
Q 023273          211 LPEKFDVVFDAVG  223 (284)
Q Consensus       211 ~~~~~d~vid~~g  223 (284)
                      .-+.+|++++++|
T Consensus        82 ~~g~iDilvnnAg   94 (240)
T d2bd0a1          82 RYGHIDCLVNNAG   94 (240)
T ss_dssp             HTSCCSEEEECCC
T ss_pred             HcCCcceeecccc
Confidence            1457999999987

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.58  E-value=0.0096  Score=46.51  Aligned_cols=74  Identities=18%  Similarity=0.292  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCC--eEEEEeCChhhHHHHHHcCCcE-EeeCC-CcccccCCCcccEEEeCCCC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLGADL-AIDYT-KENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~--~vi~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~d~vid~~g~  224 (284)
                      .+.+|||+||+|-+|...++.+... +.  +|+++++++.+...-..-.... ..|.. .+.+.+...++|+++.++|.
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~-g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~   90 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT   90 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHH-TCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhC-CCCCEEEEEecChhhhcccccceeeeeeecccccccccccccccccccccccc
Confidence            5579999999999999999888774 64  7889998654432211111111 12222 12344445789999999884

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.57  E-value=0.0064  Score=40.43  Aligned_cols=81  Identities=17%  Similarity=0.300  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh--hHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc--
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC--  225 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~--  225 (284)
                      .|++|+|+| .|.+|+++++++... |++|++.+..++  ..+.+++ +....+.....   ....++|.++-+-|-+  
T Consensus         4 ~~K~v~ViG-lG~sG~s~a~~L~~~-g~~v~~~D~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~d~vi~SPGi~~~   77 (93)
T d2jfga1           4 QGKNVVIIG-LGLTGLSCVDFFLAR-GVTPRVMDTRMTPPGLDKLPE-AVERHTGSLND---EWLMAADLIVASPGIALA   77 (93)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHHHT-TCCCEEEESSSSCTTGGGSCT-TSCEEESBCCH---HHHHHCSEEEECTTSCTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHHC-CCEEEEeeCCcCchhHHHHhh-ccceeecccch---hhhccCCEEEECCCCCCC
Confidence            467899999 799999999999995 999999998443  2332222 12222222111   1124689888887732  


Q ss_pred             HHHHHhhccCC
Q 023273          226 DKALKAVKEGG  236 (284)
Q Consensus       226 ~~~~~~l~~~G  236 (284)
                      +..++..+..|
T Consensus        78 ~~~~~~a~~~g   88 (93)
T d2jfga1          78 HPSLSAAADAG   88 (93)
T ss_dssp             SHHHHHHHHTT
T ss_pred             CHHHHHHHHcC
Confidence            33444444433

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.51  E-value=0.0091  Score=44.73  Aligned_cols=74  Identities=16%  Similarity=0.236  Sum_probs=46.9

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-Hc----CCcEEeeCCCcccccCCCcccEEEeC
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL----GADLAIDYTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~----g~~~~~~~~~~~~~~~~~~~d~vid~  221 (284)
                      .--.+++|+|+| +|+++.+++..+... + ++.++.|+.+|.+.+. ++    ........+..++......+|++++|
T Consensus        14 ~~~~~k~vlIlG-aGG~arai~~aL~~~-~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~   90 (177)
T d1nvta1          14 GRVKDKNIVIYG-AGGAARAVAFELAKD-N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINA   90 (177)
T ss_dssp             CCCCSCEEEEEC-CSHHHHHHHHHHTSS-S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEEC
T ss_pred             CCcCCCEEEEEC-CcHHHHHHHHHHccc-c-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccC
Confidence            335788999999 899999877666542 4 8999999988876653 22    11110000111222334678999999


Q ss_pred             CC
Q 023273          222 VG  223 (284)
Q Consensus       222 ~g  223 (284)
                      +.
T Consensus        91 tp   92 (177)
T d1nvta1          91 TP   92 (177)
T ss_dssp             SC
T ss_pred             Cc
Confidence            75

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.40  E-value=0.011  Score=47.06  Aligned_cols=38  Identities=29%  Similarity=0.513  Sum_probs=31.0

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCC
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSS  185 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~  185 (284)
                      .++|+.++||+|+++++|++.++.+... |+ +++++.++
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~-Ga~~vvl~~R~   43 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARR-GAPHLLLVSRS   43 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHH-TCSEEEEEESS
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence            5789999999999999999988877764 77 56666665

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=95.33  E-value=0.032  Score=44.11  Aligned_cols=36  Identities=17%  Similarity=0.235  Sum_probs=30.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL  189 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~  189 (284)
                      +.||+||++++|.+.++.+... |++|++++++.++.
T Consensus         3 vAlVTGas~GIG~aia~~la~~-G~~Vvi~~r~~~~~   38 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQ-GFRVVVHYRHSEGA   38 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCchHH
Confidence            4699999999999988888774 99999999876543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.27  E-value=0.091  Score=38.21  Aligned_cols=66  Identities=18%  Similarity=0.252  Sum_probs=50.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC  225 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~  225 (284)
                      +|-++| .|.+|...+.-+... |.+|++.++++++.+.+++.+.... ++    ..+..+..|++|-|+.+.
T Consensus         2 kIgiIG-lG~MG~~~A~~L~~~-G~~V~~~d~~~~~~~~~~~~~~~~~-~~----~~e~~~~~d~ii~~v~~~   67 (161)
T d1vpda2           2 KVGFIG-LGIMGKPMSKNLLKA-GYSLVVSDRNPEAIADVIAAGAETA-ST----AKAIAEQCDVIITMLPNS   67 (161)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEEC-SS----HHHHHHHCSEEEECCSSH
T ss_pred             EEEEEe-hhHHHHHHHHHHHHC-CCeEEEEeCCcchhHHHHHhhhhhc-cc----HHHHHhCCCeEEEEcCCH
Confidence            588899 899999988777663 9999999999999999988776422 11    222345689999988753

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.26  E-value=0.043  Score=40.71  Aligned_cols=94  Identities=19%  Similarity=0.170  Sum_probs=60.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEe-C-ChhhHHHHHHcCCcEEeeCCC-------------cccccCCCccc
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-S-STAKLDLLRSLGADLAIDYTK-------------ENIEDLPEKFD  216 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~-~-~~~~~~~~~~~g~~~~~~~~~-------------~~~~~~~~~~d  216 (284)
                      -+|.|.| -|.+|+..++.+.......++.+- . +.+....+...+.........             ..+.+...++|
T Consensus         3 irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD   81 (172)
T d2czca2           3 VKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVD   81 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCS
T ss_pred             EEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCC
Confidence            3688999 899999988887764345666553 3 334445555655432221110             01111134799


Q ss_pred             EEEeCCCCc---HHHHHhhccCCEEEEEcCCCC
Q 023273          217 VVFDAVGQC---DKALKAVKEGGRVVSIIGSVT  246 (284)
Q Consensus       217 ~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~  246 (284)
                      +|+||+|.+   +.+-..+..+-+.|+.+.+..
T Consensus        82 vViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~  114 (172)
T d2czca2          82 IIVDATPGGIGAKNKPLYEKAGVKAIFQGGEKA  114 (172)
T ss_dssp             EEEECCSTTHHHHHHHHHHHHTCEEEECTTSCG
T ss_pred             EEEECCCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence            999999974   566778899999999887653

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.25  E-value=0.073  Score=38.43  Aligned_cols=89  Identities=22%  Similarity=0.302  Sum_probs=61.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChh---hHHHHHHcCCcEEeeCCCcccccC----------------
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTA---KLDLLRSLGADLAIDYTKENIEDL----------------  211 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~----------------  211 (284)
                      ++|.|+|++|.+|..+.++.+... .++++.+.....   -.++++++.+..+.-.+.......                
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~~   82 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGAD   82 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCcc
Confidence            689999999999999999998742 467887765333   235567888776644332221110                


Q ss_pred             ------CCcccEEEeCC-C--CcHHHHHhhccCCEEEE
Q 023273          212 ------PEKFDVVFDAV-G--QCDKALKAVKEGGRVVS  240 (284)
Q Consensus       212 ------~~~~d~vid~~-g--~~~~~~~~l~~~G~~v~  240 (284)
                            ...+|+++.+. |  ++...+.+++.+-++.+
T Consensus        83 ~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaL  120 (150)
T d1r0ka2          83 ALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVAL  120 (150)
T ss_dssp             HHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEE
T ss_pred             chheecccccceeeeecCchhHHHHHHHHHhcCCEEEE
Confidence                  23589999985 4  25788888888877654

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.24  E-value=0.047  Score=44.64  Aligned_cols=90  Identities=20%  Similarity=0.210  Sum_probs=55.8

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCC---cEEeeCCCcccccCCCcccEE
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGA---DLAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~---~~~~~~~~~~~~~~~~~~d~v  218 (284)
                      ..+.+|++||-+| +| .|+.++.+|++ ++.+|++++.++. ...+    +..+.   ..+++.+..++....+.+|++
T Consensus        29 ~~~~~~~~VLDiG-cG-~G~ls~~aa~~-Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~~~~~~D~i  104 (316)
T d1oria_          29 RHLFKDKVVLDVG-SG-TGILCMFAAKA-GARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDII  104 (316)
T ss_dssp             HHHHTTCEEEEET-CT-TSHHHHHHHHT-TCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEE
T ss_pred             cccCCcCEEEEEe-cC-CcHHHHHHHHh-CCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHcccccceeEEE
Confidence            3456899999999 44 47788877776 4568999998754 2222    23332   223333333333334679998


Q ss_pred             EeC-CCC-------c----HHHHHhhccCCEEE
Q 023273          219 FDA-VGQ-------C----DKALKAVKEGGRVV  239 (284)
Q Consensus       219 id~-~g~-------~----~~~~~~l~~~G~~v  239 (284)
                      +.. .+.       +    ...-++|+++|+++
T Consensus       105 vs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         105 ISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             EECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            753 221       1    34557999999986

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=95.09  E-value=0.044  Score=43.98  Aligned_cols=94  Identities=22%  Similarity=0.298  Sum_probs=63.9

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHc----CCc-EEeeCCCcccccCCCcccEEE
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL----GAD-LAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      .++..+.+||-+| || .|..+..+++... +.+++.++.+++.++.+++.    +.. .....+...++ ..+.+|+|+
T Consensus        23 ~~~~~~~~ILDiG-cG-~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~~-~~~~fD~v~   99 (281)
T d2gh1a1          23 WKITKPVHIVDYG-CG-YGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-LNDKYDIAI   99 (281)
T ss_dssp             SCCCSCCEEEEET-CT-TTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTCC-CSSCEEEEE
T ss_pred             hccCCcCEEEEec-Cc-CCHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccccccccc-ccCCceEEE
Confidence            4567788999999 44 5888888887642 47899999999988877643    322 11222222221 245799998


Q ss_pred             eCCC-----C----cHHHHHhhccCCEEEEEc
Q 023273          220 DAVG-----Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       220 d~~g-----~----~~~~~~~l~~~G~~v~~g  242 (284)
                      ....     +    ++.+.+.|+++|+++...
T Consensus       100 ~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1         100 CHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             EESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            6543     2    267889999999998765

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.08  E-value=0.1  Score=37.57  Aligned_cols=80  Identities=25%  Similarity=0.316  Sum_probs=51.8

Q ss_pred             EEEEEcCCchHHHHHHH-HHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeCCCcccccCCCcccEEEeCCCC--cHHH
Q 023273          153 SILVLGGAGGVGTMVIQ-LAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CDKA  228 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~-~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~  228 (284)
                      +|.++| +|.+|.+.++ +.+. ++.++++.++++++.+.+++ .+.. ..+..    .. -...|++|=++-.  ....
T Consensus         2 kI~fIG-~G~MG~ai~~~l~~~-~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~----~~-v~~~Div~lavkP~~~~~v   73 (152)
T d1yqga2           2 NVYFLG-GGNMAAAVAGGLVKQ-GGYRIYIANRGAEKRERLEKELGVE-TSATL----PE-LHSDDVLILAVKPQDMEAA   73 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHH-CSCEEEEECSSHHHHHHHHHHTCCE-EESSC----CC-CCTTSEEEECSCHHHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHC-CCCcEEEEeCChhHHHHhhhhcccc-ccccc----cc-ccccceEEEecCHHHHHHh
Confidence            688999 8999998777 4554 45899999999999887764 5543 22221    11 2347888776642  3445


Q ss_pred             HHhhccCCEEEE
Q 023273          229 LKAVKEGGRVVS  240 (284)
Q Consensus       229 ~~~l~~~G~~v~  240 (284)
                      ++-+++.++++.
T Consensus        74 ~~~l~~~~~~vi   85 (152)
T d1yqga2          74 CKNIRTNGALVL   85 (152)
T ss_dssp             HTTCCCTTCEEE
T ss_pred             HHHHhhcccEEe
Confidence            555555555543

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=95.04  E-value=0.033  Score=43.88  Aligned_cols=92  Identities=16%  Similarity=0.206  Sum_probs=59.1

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-EE--eeCCCc-ccccCCCcccEE
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LA--IDYTKE-NIEDLPEKFDVV  218 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~--~~~~~~-~~~~~~~~~d~v  218 (284)
                      -.+++++||-+| ||. |..+..+++. +..+++.++.+++.++.+++    .+.. .+  +..+.. ......+.+|+|
T Consensus        21 ~~~~~~~VLDlG-CG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~~~fD~V   97 (252)
T d1ri5a_          21 YTKRGDSVLDLG-CGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVI   97 (252)
T ss_dssp             HCCTTCEEEEET-CTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEE
T ss_pred             hCCCcCEEEEec-ccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcccccccceEE
Confidence            357899999999 444 6667778776 45689999999998888853    2321 11  111111 111124579999


Q ss_pred             EeCCC-C------------cHHHHHhhccCCEEEEE
Q 023273          219 FDAVG-Q------------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       219 id~~g-~------------~~~~~~~l~~~G~~v~~  241 (284)
                      +.... .            +..+.+.|+++|+++..
T Consensus        98 ~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          98 SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            76543 1            13466789999999864

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.04  E-value=0.021  Score=42.52  Aligned_cols=41  Identities=20%  Similarity=0.316  Sum_probs=35.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~  193 (284)
                      .+|.|+|++|.+|.+.++.+... |.+|++..+++++.+.+.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~-G~~V~l~~R~~e~~~~l~   41 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATL-GHEIVVGSRREEKAEAKA   41 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH
Confidence            36888877899999988888885 999999999999876664

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.029  Score=43.30  Aligned_cols=95  Identities=12%  Similarity=0.090  Sum_probs=63.8

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC----Cc--EEeeCCCcccccCCCcccEEE
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG----AD--LAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g----~~--~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      ....++.+||-+|  ++.|..+..+++. ++.++++++.+++-++.+++.-    ..  ..+..+..++....+.+|+|+
T Consensus        56 ~~~~~~~~vLDiG--cG~G~~~~~l~~~-~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~~~~~~~fD~I~  132 (222)
T d2ex4a1          56 PNKTGTSCALDCG--AGIGRITKRLLLP-LFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIW  132 (222)
T ss_dssp             --CCCCSEEEEET--CTTTHHHHHTTTT-TCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEE
T ss_pred             cCCCCCCEEEEec--cCCCHhhHHHHHh-cCCEEEEeecCHHHhhccccccccccccccccccccccccccccccccccc
Confidence            3456788999998  4667778787766 3778999999999988887542    11  223333223333356799998


Q ss_pred             eCCC--C---------cHHHHHhhccCCEEEEEcC
Q 023273          220 DAVG--Q---------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       220 d~~g--~---------~~~~~~~l~~~G~~v~~g~  243 (284)
                      ....  .         +..+.+.|+++|.+++...
T Consensus       133 ~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~  167 (222)
T d2ex4a1         133 IQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN  167 (222)
T ss_dssp             EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence            6532  1         2567789999999998743

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=95.02  E-value=0.054  Score=41.70  Aligned_cols=94  Identities=12%  Similarity=0.165  Sum_probs=60.7

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHh--cCCeEEEEeCChhhHHHHHHc----CCcEEeeCCCccccc-CCCcccEEE
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHV--FGASKVAATSSTAKLDLLRSL----GADLAIDYTKENIED-LPEKFDVVF  219 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~--~g~~vi~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~-~~~~~d~vi  219 (284)
                      .++++.+||-+|+  +.|..+..+++..  .+++++.++.+++-++.+++.    +....+.....+... ....+|+++
T Consensus        36 ~~~~~~~vLDlGC--GtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~i~  113 (225)
T d1im8a_          36 FVTADSNVYDLGC--SRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVI  113 (225)
T ss_dssp             HCCTTCEEEEESC--TTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEE
T ss_pred             hcCCCCEEEEecc--chhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccccccceeeE
Confidence            4689999999993  4566666666642  478999999999988888642    222111111111112 134567766


Q ss_pred             eCCC----C-------cHHHHHhhccCCEEEEEc
Q 023273          220 DAVG----Q-------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       220 d~~g----~-------~~~~~~~l~~~G~~v~~g  242 (284)
                      .+..    +       ++.+.+.|+|+|.+++..
T Consensus       114 ~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         114 LNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             EESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            5433    1       267889999999999764

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.97  E-value=0.1  Score=39.22  Aligned_cols=92  Identities=18%  Similarity=0.263  Sum_probs=61.1

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC--c--EEeeCCCcccccC-CCc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA--D--LAIDYTKENIEDL-PEK  214 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~--~--~~~~~~~~~~~~~-~~~  214 (284)
                      +.....++++||-+|+  +.|..++.+++.  +.++++++.+++..+.+++    .+.  .  .++..+.  +... .+.
T Consensus        46 ~~l~~~~~~~VLDiGc--G~G~~~~~la~~--~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~--~~~~~~~~  119 (194)
T d1dusa_          46 ENVVVDKDDDILDLGC--GYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL--YENVKDRK  119 (194)
T ss_dssp             HHCCCCTTCEEEEETC--TTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST--TTTCTTSC
T ss_pred             HhCCcCCCCeEEEEee--cCChhHHHHHhh--ccccceeeeccccchhHHHHHHHhCCccceEEEEEcch--hhhhccCC
Confidence            5567889999999984  456667777764  6799999999888877753    221  1  2222221  1111 457


Q ss_pred             ccEEEeCCC---C-------cHHHHHhhccCCEEEEE
Q 023273          215 FDVVFDAVG---Q-------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       215 ~d~vid~~g---~-------~~~~~~~l~~~G~~v~~  241 (284)
                      +|+|+....   .       .+.+.+.|+++|++++.
T Consensus       120 fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         120 YNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             EEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            999986432   1       25678899999998754

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.95  E-value=0.04  Score=41.88  Aligned_cols=70  Identities=13%  Similarity=0.134  Sum_probs=47.7

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-cEEeeCCCcccccCCCcccEEEeC
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~d~vid~  221 (284)
                      ..++ +|++||-.| || .|..++.+++. +..+|+.++.+++..+.+++.-. ..+++.   ++....+.+|+||.+
T Consensus        44 ~~dl-~Gk~VLDlG-cG-tG~l~i~a~~~-ga~~V~~vDid~~a~~~ar~N~~~~~~~~~---D~~~l~~~fD~Vi~N  114 (197)
T d1ne2a_          44 DGNI-GGRSVIDAG-TG-NGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVA---DVSEISGKYDTWIMN  114 (197)
T ss_dssp             HTSS-BTSEEEEET-CT-TCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEEC---CGGGCCCCEEEEEEC
T ss_pred             cCCC-CCCEEEEeC-CC-CcHHHHHHHHc-CCCcccccccCHHHHHHHHHccccccEEEE---ehhhcCCcceEEEeC
Confidence            4444 699999998 44 35566666664 45679999999998888876432 233333   344456789999875

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.94  E-value=0.018  Score=47.02  Aligned_cols=69  Identities=22%  Similarity=0.211  Sum_probs=44.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHHHHcCC---cEEeeCCCcccccCCCcccEEEeCCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGA---DLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      ++|||+||+|-+|...+..+... |.+|+++++ +..+.+.....-.   -.+.+.+  .......++|+||.+++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~d~VihlAa   74 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMD-GHEVTVVDNFFTGRKRNVEHWIGHENFELINHD--VVEPLYIEVDQIYHLAS   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECC--TTSCCCCCCSEEEECCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCCcCCHHHHHHhcCCCceEEEehH--HHHHHHcCCCEEEECcc
Confidence            68999999999999999888874 999999875 2223322222111   1222222  22333457999999875

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=94.92  E-value=0.032  Score=44.22  Aligned_cols=42  Identities=26%  Similarity=0.330  Sum_probs=33.3

Q ss_pred             ccCCCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCChhhH
Q 023273          147 AFSAGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTAKL  189 (284)
Q Consensus       147 ~~~~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~~~~  189 (284)
                      +.-.|+++||+|++  .++|++.++.+... |++|+++.++.++.
T Consensus         2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~-Ga~Vil~~~~~~~~   45 (268)
T d2h7ma1           2 GLLDGKRILVSGIITDSSIAFHIARVAQEQ-GAQLVLTGFDRLRL   45 (268)
T ss_dssp             CTTTTCEEEECCCSSTTCHHHHHHHHHHHT-TCEEEEEECSCHHH
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHc-CCEEEEEeCChHHH
Confidence            45678999999964  46999888766663 99999999877765

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=94.88  E-value=0.095  Score=38.58  Aligned_cols=98  Identities=17%  Similarity=0.242  Sum_probs=60.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC--ChhhHHHHHHcCC-------cE-------Ee--------eC-CCcc
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS--STAKLDLLRSLGA-------DL-------AI--------DY-TKEN  207 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~--~~~~~~~~~~~g~-------~~-------~~--------~~-~~~~  207 (284)
                      +|.|.| -|-+|+++.+.+.. .+.+++++-.  +.+...++-++..       ..       .+        .. +...
T Consensus         2 kigING-fGRIGR~~~R~l~~-~~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~   79 (168)
T d2g82a1           2 KVGING-FGRIGRQVFRILHS-RGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE   79 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHH-HTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CcHHHHHHHHHHhc-CCCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChHH
Confidence            578888 99999999998877 4888777654  3334444433221       00       00        00 0111


Q ss_pred             cccCCCcccEEEeCCCCc---HHHHHhhccCCEEEEEcCCCCCCceeE
Q 023273          208 IEDLPEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTPPASSF  252 (284)
Q Consensus       208 ~~~~~~~~d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~~~~~~~  252 (284)
                      .++...++|+|+||+|.+   +.+...+..+.+=|+++.|.......+
T Consensus        80 i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~kd~~~~i  127 (168)
T d2g82a1          80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITI  127 (168)
T ss_dssp             CCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEEC
T ss_pred             CcccccCCceeEeccccccchHHhhhhhccccceeeecccccccccee
Confidence            222234799999999963   677788888877777777754333333

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.85  E-value=0.12  Score=38.73  Aligned_cols=107  Identities=19%  Similarity=0.196  Sum_probs=71.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC-C----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g-~----  224 (284)
                      .+.++.|+| .|.+|...++.++. ++.+|+..++........+..+....     .++.+..+..|+|.-+.. .    
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~-fg~~v~~~d~~~~~~~~~~~~~~~~~-----~~l~~~l~~sD~v~~~~plt~~T~  115 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAP-FDVHLHYTDRHRLPESVEKELNLTWH-----ATREDMYPVCDVVTLNCPLHPETE  115 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGG-GTCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHGGGCSEEEECSCCCTTTT
T ss_pred             cccceeecc-ccccchhhhhhhhc-cCceEEEEeecccccccccccccccc-----CCHHHHHHhccchhhcccccccch
Confidence            578999999 99999999999999 49999999986555554444442211     122333456888876554 1    


Q ss_pred             ---cHHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHHHHHHHHHHCCCeeE
Q 023273          225 ---CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA  275 (284)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~  275 (284)
                         -...+..|+++..+|-++-...            =+-+.+++++++|++.-
T Consensus       116 ~li~~~~l~~mk~ga~lIN~aRG~i------------vd~~aL~~aL~~g~i~g  157 (188)
T d2naca1         116 HMINDETLKLFKRGAYIVNTARGKL------------CDRDAVARALESGRLAG  157 (188)
T ss_dssp             TCBSHHHHTTSCTTEEEEECSCGGG------------BCHHHHHHHHHTTSEEE
T ss_pred             hhhHHHHHHhCCCCCEEEecCchhh------------hhHHHHHHHHhCCCcee
Confidence               1678888988887776652110            12345567777777653

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.85  E-value=0.09  Score=39.12  Aligned_cols=91  Identities=16%  Similarity=0.142  Sum_probs=54.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-Chh-hHHHHHHcCCcEEeeCCC------------cccccCCCcccEE
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STA-KLDLLRSLGADLAIDYTK------------ENIEDLPEKFDVV  218 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~-~~~~~~~~g~~~~~~~~~------------~~~~~~~~~~d~v  218 (284)
                      +|.|.| .|.+|+..++.+......+++.+.. .+. ....+...+.......+.            ..+.+...++|+|
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiV   81 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV   81 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCEE
Confidence            578999 9999999999988754567776643 333 333333333221111110            0111112379999


Q ss_pred             EeCCCCc---HHHHHhhccCCEEEEEcCC
Q 023273          219 FDAVGQC---DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       219 id~~g~~---~~~~~~l~~~G~~v~~g~~  244 (284)
                      +||+|.+   +.+-.++..+-++++.+..
T Consensus        82 iecTG~f~~~e~a~~hl~~G~KvIi~~~~  110 (178)
T d1b7go1          82 VDTTPNGVGAQYKPIYLQLQRNAIFQGGE  110 (178)
T ss_dssp             EECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             EECCCCcCCHHHHHHHHHcCCEEEEECCC
Confidence            9999974   5566677777777765543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.72  E-value=0.036  Score=42.13  Aligned_cols=83  Identities=20%  Similarity=0.284  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC-C----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g-~----  224 (284)
                      .|.+|.|+| .|.+|...+++++. +|++|++.+...+....  ..+.      ....+.+.-+..|+++.+.. +    
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~-fg~~V~~~d~~~~~~~~--~~~~------~~~~l~~~l~~sDii~~~~plt~~T~  111 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEG-FGAKVITYDIFRNPELE--KKGY------YVDSLDDLYKQADVISLHVPDVPANV  111 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHH-TTCEEEEECSSCCHHHH--HTTC------BCSCHHHHHHHCSEEEECSCCCGGGT
T ss_pred             cCCeEEEec-ccccchhHHHhHhh-hcccccccCcccccccc--ccee------eeccccccccccccccccCCcccccc
Confidence            488999999 99999999999999 59999999875443222  1111      11123333446788777654 1    


Q ss_pred             ---cHHHHHhhccCCEEEEEc
Q 023273          225 ---CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g  242 (284)
                         -...++.|+++..+|-++
T Consensus       112 ~li~~~~l~~mk~~a~lIN~s  132 (197)
T d1j4aa1         112 HMINDESIAKMKQDVVIVNVS  132 (197)
T ss_dssp             TCBSHHHHHHSCTTEEEEECS
T ss_pred             ccccHHHHhhhCCccEEEecC
Confidence               167788888888887665

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.65  E-value=0.021  Score=44.53  Aligned_cols=37  Identities=30%  Similarity=0.311  Sum_probs=31.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL  189 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~  189 (284)
                      +++||+||++++|.+.++..... |++|+++++++++.
T Consensus         2 K~alITGas~GIG~aiA~~la~~-Ga~V~i~~~~~~~~   38 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKAR-GYRVVVLDLRREGE   38 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHH-TCEEEEEESSCCSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCcccc
Confidence            67899999999999988888775 99999999876643

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.62  E-value=0.078  Score=43.46  Aligned_cols=90  Identities=19%  Similarity=0.241  Sum_probs=54.6

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCc---EEeeCCCcccccCCCcccEE
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD---LAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~---~~~~~~~~~~~~~~~~~d~v  218 (284)
                      ....+|++||-+| +| .|+.+..+|++ ++.+|++++.++ ....+    +..+..   .++..+..++....+.+|+|
T Consensus        34 ~~~~~~~~VLDlG-cG-tG~ls~~aa~~-Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~~~~~~D~i  109 (328)
T d1g6q1_          34 KDLFKDKIVLDVG-CG-TGILSMFAAKH-GAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDII  109 (328)
T ss_dssp             HHHHTTCEEEEET-CT-TSHHHHHHHHT-CCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEE
T ss_pred             cccCCcCEEEEeC-CC-CCHHHHHHHHh-CCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccCcccceeEE
Confidence            4556899999999 44 46777777776 456899998875 33333    334421   23333333333334679998


Q ss_pred             EeC-CCC-------c----HHHHHhhccCCEEE
Q 023273          219 FDA-VGQ-------C----DKALKAVKEGGRVV  239 (284)
Q Consensus       219 id~-~g~-------~----~~~~~~l~~~G~~v  239 (284)
                      +.. .+.       .    ...-+.|+++|+++
T Consensus       110 ~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         110 ISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             EECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             EEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            763 221       1    33347899999885

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=94.46  E-value=0.11  Score=40.83  Aligned_cols=97  Identities=21%  Similarity=0.285  Sum_probs=61.2

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCC-cEEeeCCCcccccCCCcccEE
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGA-DLAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~-~~~~~~~~~~~~~~~~~~d~v  218 (284)
                      ....+.+..+||-+|  ++.|..+..+++...+.++++++. ++..+.++    +.+. .++--...+-+.....++|+|
T Consensus        74 ~~~d~~~~~~VLDvG--cG~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~D~~~~~~~~~D~v  150 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVG--GGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAI  150 (253)
T ss_dssp             HHSCCTTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEE
T ss_pred             hhcCCccCCEEEEeC--CCCCHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccccchhhcccchhhe
Confidence            345667788999998  467888889998855678888886 44444443    3332 212111111123334679998


Q ss_pred             EeCCC--C---------cHHHHHhhccCCEEEEEcC
Q 023273          219 FDAVG--Q---------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       219 id~~g--~---------~~~~~~~l~~~G~~v~~g~  243 (284)
                      +-..-  .         +..+.+.|+|+|++++...
T Consensus       151 ~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         151 ILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             eeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            75432  1         2567888999999998754

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.40  E-value=0.01  Score=43.50  Aligned_cols=88  Identities=14%  Similarity=0.130  Sum_probs=51.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc--EEeeCCCcccccCCCcccEEEeCCCCc--H-
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAIDYTKENIEDLPEKFDVVFDAVGQC--D-  226 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~d~vid~~g~~--~-  226 (284)
                      .+|+|+| +|.+|.+.+..+... |.+|.++++++++.+..+..+..  ..............+.+|++|-++-..  . 
T Consensus         1 MkI~IiG-aG~iG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iii~vka~~~~~   78 (167)
T d1ks9a2           1 MKITVLG-CGALGQLWLTALCKQ-GHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSD   78 (167)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGHHH
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHC-CCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcccceEEEeecccchHH
Confidence            4799999 699998877766664 89999999987655433222211  000000000111135799999998752  3 


Q ss_pred             ---HHHHhhccCCEEEEE
Q 023273          227 ---KALKAVKEGGRVVSI  241 (284)
Q Consensus       227 ---~~~~~l~~~G~~v~~  241 (284)
                         .+..++.++..++.+
T Consensus        79 ~~~~l~~~~~~~~~Iv~~   96 (167)
T d1ks9a2          79 AVKSLASTLPVTTPILLI   96 (167)
T ss_dssp             HHHHHHTTSCTTSCEEEE
T ss_pred             HHHhhccccCcccEEeec
Confidence               333455556666665

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.34  E-value=0.091  Score=39.92  Aligned_cols=49  Identities=31%  Similarity=0.443  Sum_probs=43.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL  199 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~  199 (284)
                      -.|.+|+|.| .|.+|..+++++... |+++++.+.+.++......++.+.
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~-Gakvvv~d~d~~~~~~~~~~g~~~   73 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEA-GAQLLVADTDTERVAHAVALGHTA   73 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEecchHHHHHHHHhhcccc
Confidence            4789999999 999999999999995 999999999999998888887653

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.32  E-value=0.098  Score=38.64  Aligned_cols=92  Identities=15%  Similarity=0.201  Sum_probs=57.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-C-hhhHHHHHHcCCcEEeeCCCcc-------------cccCCCcccE
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS-S-TAKLDLLRSLGADLAIDYTKEN-------------IEDLPEKFDV  217 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~-~~~~~~~~~~g~~~~~~~~~~~-------------~~~~~~~~d~  217 (284)
                      +|.|.| -|.+|+.+++.+.......++.+.. + ......+...+.+.........             ..+...++|+
T Consensus         3 ~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vDv   81 (171)
T d1cf2o1           3 AVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI   81 (171)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred             EEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCCCE
Confidence            688998 9999999999877643455555432 2 3344455555543322111100             0111247999


Q ss_pred             EEeCCCCc---HHHHHhhccCCEEEEEcCCC
Q 023273          218 VFDAVGQC---DKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       218 vid~~g~~---~~~~~~l~~~G~~v~~g~~~  245 (284)
                      |+||+|.+   +.+-..+..+-+.|+.+.+.
T Consensus        82 ViEcTG~f~~~~~~~~hl~~G~K~vi~~~~~  112 (171)
T d1cf2o1          82 VIDCTPEGIGAKNLKMYKEKGIKAIFQGGEK  112 (171)
T ss_dssp             EEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             EEEccCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            99999974   55667788888888776554

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.31  E-value=0.027  Score=44.64  Aligned_cols=45  Identities=18%  Similarity=0.244  Sum_probs=35.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHH-HHH-hcCCeEEEEeCChhhHHHHH
Q 023273          149 SAGKSILVLGGAGGVGTMVIQL-AKH-VFGASKVAATSSTAKLDLLR  193 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~-a~~-~~g~~vi~~~~~~~~~~~~~  193 (284)
                      -.|+.++|+||++++|++.++. |+. ..|++|+++.+++++++.+.
T Consensus         4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~   50 (259)
T d1oaaa_           4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK   50 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHH
Confidence            3578889999999999987764 442 13899999999998887663

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=94.31  E-value=0.055  Score=41.73  Aligned_cols=91  Identities=20%  Similarity=0.245  Sum_probs=59.2

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc--EEeeCCCcccccCCCcccEEEeCCC
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      .+...+++||-+|+  +.|..+..+++.  +.+|++++.+++..+.+++....  .++..+.++.. ..+.+|+|+..--
T Consensus        16 ~~~~~~~~VLDiGc--G~G~~~~~l~~~--g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~~-~~~~fD~I~~~~v   90 (225)
T d2p7ia1          16 TPFFRPGNLLELGS--FKGDFTSRLQEH--FNDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ-LPRRYDNIVLTHV   90 (225)
T ss_dssp             GGGCCSSCEEEESC--TTSHHHHHHTTT--CSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC-CSSCEEEEEEESC
T ss_pred             hhhCCCCcEEEEeC--CCcHHHHHHHHc--CCeEEEEeCcHHHhhhhhcccccccccccccccccc-cccccccccccce
Confidence            34456778999983  457777777664  78999999999999988754322  22332222222 2567999875321


Q ss_pred             -----Cc----HHHH-HhhccCCEEEEE
Q 023273          224 -----QC----DKAL-KAVKEGGRVVSI  241 (284)
Q Consensus       224 -----~~----~~~~-~~l~~~G~~v~~  241 (284)
                           ++    ..+. ++|+++|.+++.
T Consensus        91 leh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          91 LEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             GGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             eEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence                 22    3444 578999999865

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.23  E-value=0.1  Score=42.87  Aligned_cols=99  Identities=18%  Similarity=0.215  Sum_probs=63.4

Q ss_pred             HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHH-----------cC----CcEEeeCC
Q 023273          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-----------LG----ADLAIDYT  204 (284)
Q Consensus       141 ~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~-----------~g----~~~~~~~~  204 (284)
                      ..++..+++++++|+-+|  ++.|..+.++|+.. ++ +++.++.+++..+.+++           +|    .-..+..+
T Consensus       142 ~~~~~~~l~~~~~vlD~G--cG~G~~~~~~a~~~-~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd  218 (328)
T d1nw3a_         142 QMIDEIKMTDDDLFVDLG--SGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD  218 (328)
T ss_dssp             HHHHHSCCCTTCEEEEET--CTTSHHHHHHHHHC-CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECC
T ss_pred             HHHHHcCCCCCCEEEEcC--CCCCHHHHHHHHHh-CCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECc
Confidence            345778999999999998  46788888898874 65 79999999887666543           12    11122221


Q ss_pred             Cc--ccccCCCcccEEEeCCC--C------cHHHHHhhccCCEEEEEc
Q 023273          205 KE--NIEDLPEKFDVVFDAVG--Q------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       205 ~~--~~~~~~~~~d~vid~~g--~------~~~~~~~l~~~G~~v~~g  242 (284)
                      ..  ++.+....+|+|+...-  .      ...+++.|++||++|..-
T Consensus       219 ~~~~~~~~~~~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         219 FLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             TTSHHHHHHHHHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccccccccccCcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            11  11111124678775322  1      256778899999998753

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.17  E-value=0.13  Score=35.31  Aligned_cols=43  Identities=14%  Similarity=0.256  Sum_probs=35.5

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      .+.....++++|+|+| +|.+|+=.+..++.. +.++.++.+.+.
T Consensus        14 ~~~l~~~~~~~vvVvG-gG~ig~E~A~~l~~~-g~~vt~i~~~~~   56 (121)
T d1mo9a2          14 VEELDYEPGSTVVVVG-GSKTAVEYGCFFNAT-GRRTVMLVRTEP   56 (121)
T ss_dssp             HHHCCSCCCSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCT
T ss_pred             HHHHhhCCCCEEEEEC-CCHHHHHHHHHHHhc-chhheEeeccch
Confidence            3455677899999999 899999888888884 999999987644

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.11  E-value=0.13  Score=36.27  Aligned_cols=32  Identities=22%  Similarity=0.278  Sum_probs=24.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~  184 (284)
                      +|.|.|++|.+|...++......+..+.....
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d   32 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELD   32 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEEC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            58899999999999888876644666665543

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=94.07  E-value=0.13  Score=40.51  Aligned_cols=97  Identities=21%  Similarity=0.259  Sum_probs=62.3

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCC-cEEeeCCCcccccCCCcccEE
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGA-DLAIDYTKENIEDLPEKFDVV  218 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~-~~~~~~~~~~~~~~~~~~d~v  218 (284)
                      +...+....+||-+|  |+.|..+..++++..+.++++++. ++-.+.+    ++.+. +++.-...+.+.....++|++
T Consensus        75 ~~~d~~~~~~vlDvG--~G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d~~~~~p~~~D~v  151 (256)
T d1qzza2          75 DAYDWSAVRHVLDVG--GGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVV  151 (256)
T ss_dssp             HTSCCTTCCEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEE
T ss_pred             hcCCCccCCEEEEEC--CCCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeeeeccccccccchhh
Confidence            344567778999998  567889999999855789999986 4444333    33342 222111222233345679988


Q ss_pred             EeCCC--C---------cHHHHHhhccCCEEEEEcC
Q 023273          219 FDAVG--Q---------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       219 id~~g--~---------~~~~~~~l~~~G~~v~~g~  243 (284)
                      +-..-  .         ++.+.+.|+++|+++++..
T Consensus       152 ~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         152 LLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             hccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            75422  1         2567788999999998864

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.03  E-value=0.084  Score=39.41  Aligned_cols=81  Identities=19%  Similarity=0.183  Sum_probs=59.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC-C---
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q---  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g-~---  224 (284)
                      -.|.+|.|+| .|.+|...+++++.. |.+|++.++.+...       ....    ...+.+.-...|+++-+.. +   
T Consensus        40 l~gk~vgIiG-~G~IG~~va~~l~~~-g~~v~~~d~~~~~~-------~~~~----~~~l~ell~~sDiv~~~~pl~~~t  106 (181)
T d1qp8a1          40 IQGEKVAVLG-LGEIGTRVGKILAAL-GAQVRGFSRTPKEG-------PWRF----TNSLEEALREARAAVCALPLNKHT  106 (181)
T ss_dssp             CTTCEEEEES-CSTHHHHHHHHHHHT-TCEEEEECSSCCCS-------SSCC----BSCSHHHHTTCSEEEECCCCSTTT
T ss_pred             ccCceEEEec-cccccccceeeeecc-cccccccccccccc-------ceee----eechhhhhhccchhhccccccccc
Confidence            3588999999 899999999999995 99999998764321       1111    1223444567899887654 1   


Q ss_pred             ----cHHHHHhhccCCEEEEEc
Q 023273          225 ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ----~~~~~~~l~~~G~~v~~g  242 (284)
                          -...++.|+++..+|-++
T Consensus       107 ~~li~~~~l~~mk~~ailIN~~  128 (181)
T d1qp8a1         107 RGLVKYQHLALMAEDAVFVNVG  128 (181)
T ss_dssp             TTCBCHHHHTTSCTTCEEEECS
T ss_pred             ccccccceeeeccccceEEecc
Confidence                178999999999998776

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.99  E-value=0.29  Score=34.85  Aligned_cols=34  Identities=24%  Similarity=0.329  Sum_probs=29.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~  184 (284)
                      -.|++|||+| +|.+|..-+..+... |++|+++..
T Consensus        11 l~gkrvLViG-gG~va~~ka~~Ll~~-GA~VtVvap   44 (150)
T d1kyqa1          11 LKDKRILLIG-GGEVGLTRLYKLMPT-GCKLTLVSP   44 (150)
T ss_dssp             CTTCEEEEEE-ESHHHHHHHHHHGGG-TCEEEEEEE
T ss_pred             eCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeC
Confidence            4789999999 799999999999985 999998864

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=93.95  E-value=0.4  Score=34.66  Aligned_cols=118  Identities=11%  Similarity=0.092  Sum_probs=69.9

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEeeCCCcccccCCCcccEEEeCCCC---cHH
Q 023273          153 SILVLGGAGGVGTM-VIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CDK  227 (284)
Q Consensus       153 ~vlI~ga~g~~G~~-a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---~~~  227 (284)
                      +|.|+| +|.+|.. .+...+...+..+++++.++++.+.+. .++....++.-.+-+   ...+|+|+-|+..   .+.
T Consensus         3 rvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ll---~~~iD~V~I~tp~~~H~~~   78 (167)
T d1xeaa1           3 KIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVL---QYGVDAVMIHAATDVHSTL   78 (167)
T ss_dssp             EEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGG---GGCCSEEEECSCGGGHHHH
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHHHhc---ccccceecccccccccccc
Confidence            688999 8998854 455555544667777778887776664 566443332211212   2469999988874   366


Q ss_pred             HHHhhccCCEEEEEcCCCCC--------------CceeEE--EeccHHHHHHHHHHHHCCCeeE
Q 023273          228 ALKAVKEGGRVVSIIGSVTP--------------PASSFV--LTSDGSILEKLNPYFESGKVKA  275 (284)
Q Consensus       228 ~~~~l~~~G~~v~~g~~~~~--------------~~~~~~--~~~~~~~~~~~~~~~~~g~i~~  275 (284)
                      +..++..+ +=|++.-|-..              ....+.  +......+.++.+.++.|++..
T Consensus        79 ~~~al~~g-k~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~~r~~~~~~~~~~~~~~G~ig~  141 (167)
T d1xeaa1          79 AAFFLHLG-IPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNGFDAMVQDWLQVAAAGKLPT  141 (167)
T ss_dssp             HHHHHHTT-CCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGTHHHHHHHHHHHHHHTCCCH
T ss_pred             cccccccc-cccccCCCCcCCHHHHHHHHHHHHHcCCEEEEEeCcCCHHHHHHHHHhhcCCCCc
Confidence            77777754 55667654311              111111  1122355777777888887653

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.86  E-value=0.05  Score=37.20  Aligned_cols=85  Identities=14%  Similarity=0.243  Sum_probs=51.3

Q ss_pred             cCCC-CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe-eCCCcc-cccC--CCcccEE-EeC
Q 023273          148 FSAG-KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKEN-IEDL--PEKFDVV-FDA  221 (284)
Q Consensus       148 ~~~g-~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~-~~~~--~~~~d~v-id~  221 (284)
                      +.++ .+|.|+| +|.+|++.+..|+.+ |.++++++.+++.-.  .+.....++ ++++.+ +...  ..++|++ ++.
T Consensus         7 ~~~~~~kigIlG-gGQL~rMla~aA~~l-G~~v~v~d~~~~~PA--~~va~~~i~~~~~d~~~l~~~~~~~~~DviT~E~   82 (111)
T d1kjqa2           7 LRPAATRVMLLG-SGELGKEVAIECQRL-GVEVIAVDRYADAPA--MHVAHRSHVINMLDGDALRRVVELEKPHYIVPEI   82 (111)
T ss_dssp             TSTTCCEEEEES-CSHHHHHHHHHHHTT-TCEEEEEESSTTCGG--GGGSSEEEECCTTCHHHHHHHHHHHCCSEEEECS
T ss_pred             CCCCCCEEEEEe-CCHHHHHHHHHHHHC-CCEEEEEcCCCCCch--hhcCCeEEECCCCCHHHHHHHHHhhCCceEEEEe
Confidence            3444 4699999 899999999999997 999999998765322  222222221 222211 1111  1356876 444


Q ss_pred             CCCcHHHHHhhccCC
Q 023273          222 VGQCDKALKAVKEGG  236 (284)
Q Consensus       222 ~g~~~~~~~~l~~~G  236 (284)
                      -.-+..+++.|.+.|
T Consensus        83 EnI~~~~L~~le~~g   97 (111)
T d1kjqa2          83 EAIATDMLIQLEEEG   97 (111)
T ss_dssp             SCSCHHHHHHHHHTT
T ss_pred             cCcCHHHHHHHHHCC
Confidence            444456666665555

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=93.83  E-value=0.062  Score=43.56  Aligned_cols=70  Identities=23%  Similarity=0.317  Sum_probs=43.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC--Chh---hHHHHHHcCCcEEeeCCC---cccccC--CCcccEEEeCC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS--STA---KLDLLRSLGADLAIDYTK---ENIEDL--PEKFDVVFDAV  222 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~--~~~---~~~~~~~~g~~~~~~~~~---~~~~~~--~~~~d~vid~~  222 (284)
                      +|||+||+|-+|...++.+... |.+|++++.  ...   +...+...+.-.++.-+-   +.+.+.  ...+|+||.++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~-g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHC-cCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            6999999999999999888874 999999863  222   223333333223332221   112222  23579999987


Q ss_pred             C
Q 023273          223 G  223 (284)
Q Consensus       223 g  223 (284)
                      +
T Consensus        81 a   81 (338)
T d1orra_          81 G   81 (338)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.76  E-value=0.028  Score=45.33  Aligned_cols=93  Identities=17%  Similarity=0.130  Sum_probs=60.5

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CCc------EEeeCCCccc---ccC
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD------LAIDYTKENI---EDL  211 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~~------~~~~~~~~~~---~~~  211 (284)
                      ..+.+++.+||-+|+  +.|..+..+++.  |++|+.++.+++-++.+++.    +..      .+.+.+-...   ...
T Consensus        51 ~l~~~~~~~vLD~Gc--G~G~~~~~la~~--g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (292)
T d1xvaa_          51 LLRQHGCHRVLDVAC--GTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPA  126 (292)
T ss_dssp             HHHHTTCCEEEESSC--TTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCC
T ss_pred             HhhhcCCCEEEEecC--CCcHHHHHHHHc--CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCC
Confidence            345567889999983  567788888875  78999999999988777542    111      1111110000   012


Q ss_pred             CCcccEEEeCCCC-----------------cHHHHHhhccCCEEEEE
Q 023273          212 PEKFDVVFDAVGQ-----------------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       212 ~~~~d~vid~~g~-----------------~~~~~~~l~~~G~~v~~  241 (284)
                      ...+|+|+....+                 ++.+.+.|+|+|.+++-
T Consensus       127 ~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~  173 (292)
T d1xvaa_         127 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID  173 (292)
T ss_dssp             TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEEe
Confidence            4579998864321                 25688899999999873

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=93.68  E-value=0.04  Score=43.26  Aligned_cols=35  Identities=23%  Similarity=0.333  Sum_probs=29.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      +.|||+|+++++|++.++..... |++|++++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~-Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAA-GHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECChH
Confidence            35799999999999988888874 999999987643

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=93.60  E-value=0.13  Score=39.78  Aligned_cols=95  Identities=18%  Similarity=0.225  Sum_probs=64.2

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCcEEe---eCCC-cccccC----
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADLAI---DYTK-ENIEDL----  211 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~~~---~~~~-~~~~~~----  211 (284)
                      ..+....++||-+|  ..+|..++.+|+.+. +.+++.++.+++..+.+++    .|...-+   .-+. +.+++.    
T Consensus        54 L~~~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~  131 (227)
T d1susa1          54 LLKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDE  131 (227)
T ss_dssp             HHHHHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCG
T ss_pred             HHHhcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhcc
Confidence            34455678999998  578888899988763 5799999999998877754    4533212   2111 112221    


Q ss_pred             --CCcccEEE-eCCCC-----cHHHHHhhccCCEEEEE
Q 023273          212 --PEKFDVVF-DAVGQ-----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       212 --~~~~d~vi-d~~g~-----~~~~~~~l~~~G~~v~~  241 (284)
                        .+.||.|| |+.-.     ++.++++|+++|.++.=
T Consensus       132 ~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~D  169 (227)
T d1susa1         132 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  169 (227)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             ccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEc
Confidence              34699865 65443     37899999999999854

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.57  E-value=0.063  Score=40.77  Aligned_cols=82  Identities=30%  Similarity=0.408  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC-C----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g-~----  224 (284)
                      .|.+|.|+| .|.+|..++++++. +|++|++.++...+...   ..    +..  ..+.+..+..|++.-+.. .    
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~-fg~~v~~~d~~~~~~~~---~~----~~~--~~l~~l~~~~D~v~~~~plt~~T~  112 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKG-FGAKVIAYDPYPMKGDH---PD----FDY--VSLEDLFKQSDVIDLHVPGIEQNT  112 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHH-TTCEEEEECSSCCSSCC---TT----CEE--CCHHHHHHHCSEEEECCCCCGGGT
T ss_pred             cceeeeeee-cccccccccccccc-cceeeeccCCccchhhh---cc----hhH--HHHHHHHHhcccceeeeccccccc
Confidence            478999999 99999999999999 59999999875432110   00    011  122333345788776654 1    


Q ss_pred             ---cHHHHHhhccCCEEEEEc
Q 023273          225 ---CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g  242 (284)
                         -...+..|+++..+|-++
T Consensus       113 ~li~~~~l~~mk~~a~lIN~a  133 (199)
T d1dxya1         113 HIINEAAFNLMKPGAIVINTA  133 (199)
T ss_dssp             TSBCHHHHHHSCTTEEEEECS
T ss_pred             ccccHHHhhccCCceEEEecc
Confidence               167889999999888776

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=93.50  E-value=0.12  Score=38.18  Aligned_cols=99  Identities=19%  Similarity=0.259  Sum_probs=57.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC--ChhhHHHHHHcCC-------cE-------Eee------CCC---cc
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS--STAKLDLLRSLGA-------DL-------AID------YTK---EN  207 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~--~~~~~~~~~~~g~-------~~-------~~~------~~~---~~  207 (284)
                      +|.|.| -|.+|+++.+.+......+++++-.  +.+....+-+...       ..       .++      +..   ..
T Consensus         3 kIgING-fGRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p~~   81 (171)
T d3cmco1           3 KVGING-FGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPEN   81 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCCHHH
Confidence            577888 8999999998887633455555543  3333333322211       00       010      011   11


Q ss_pred             cccCCCcccEEEeCCCCc---HHHHHhhccCCEEEEEcCCCCCCceeE
Q 023273          208 IEDLPEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTPPASSF  252 (284)
Q Consensus       208 ~~~~~~~~d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~~~~~~~  252 (284)
                      .++...++|+|+||+|.+   +.+...|..+-+-|+++.|......++
T Consensus        82 i~W~~~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap~~d~~~t~  129 (171)
T d3cmco1          82 LAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITI  129 (171)
T ss_dssp             CCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEEC
T ss_pred             ccccccCCcEEEEecCccCCHHHHHHHHhCCCceEEEeccccccccee
Confidence            222234799999999953   677788888877777777754333333

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.49  E-value=0.042  Score=34.94  Aligned_cols=35  Identities=26%  Similarity=0.386  Sum_probs=30.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      ++|.|+| +|.+|++.++.++.+ |.++++++.+++-
T Consensus         2 k~vgIlG-~GQLgrMl~~Aa~~L-G~~v~vldp~~~~   36 (78)
T d3etja2           2 KQVCVLG-NGQLGRMLRQAGEPL-GIAVWPVGLDAEP   36 (78)
T ss_dssp             EEEEEEB-CSHHHHHHHHHHGGG-TEEEEEECTTSCG
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHc-CCEEEEEcCCCCC
Confidence            4789999 899999999999997 9999999975443

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.49  E-value=0.058  Score=40.26  Aligned_cols=94  Identities=22%  Similarity=0.208  Sum_probs=60.2

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh-----------------------HHHHHHcCCcEEeeC
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-----------------------LDLLRSLGADLAIDY  203 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~-----------------------~~~~~~~g~~~~~~~  203 (284)
                      ....+++|+|+| +|+.|+.|+..+... |.+|++++..++-                       .++++..|.+..++.
T Consensus        39 ~~~~~k~V~IIG-aGPAGL~AA~~la~~-G~~Vtl~E~~~~~GG~l~~~~~~p~~~~~~~~~~~~~~~~~~~gV~i~l~~  116 (179)
T d1ps9a3          39 PAVQKKNLAVVG-AGPAGLAFAINAAAR-GHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNH  116 (179)
T ss_dssp             SCSSCCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESC
T ss_pred             CCCCCcEEEEEC-ccHHHHHHHHHHHhh-ccceEEEeccCccCceEEEEEeCcccchHHHHHHHHHHhhhcCCeEEEeCC
Confidence            445678999999 899999999999885 9999999975421                       122234454433433


Q ss_pred             CCcccccCCCcccEEEeCCCCc--HHHHHhhccCCEEEEEcCC
Q 023273          204 TKENIEDLPEKFDVVFDAVGQC--DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       204 ~~~~~~~~~~~~d~vid~~g~~--~~~~~~l~~~G~~v~~g~~  244 (284)
                      .-.  .+....+|.+|-++|..  .....-+..+.+++.+|+.
T Consensus       117 ~Vt--~~~~~~~d~vilAtG~~~~~~~~pg~~~g~~v~viggg  157 (179)
T d1ps9a3         117 TVT--ADQLQAFDETILASGIPNRALAQPLIDSGKTVHLIGGC  157 (179)
T ss_dssp             CCC--SSSSCCSSEEEECCCEECCTTHHHHHTTTCCEEECGGG
T ss_pred             EEc--ccccccceeEEEeecCCCcccccchhccCCEEEEECCc
Confidence            211  12245789999999852  2333344455566666643

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.40  E-value=0.095  Score=39.47  Aligned_cols=86  Identities=16%  Similarity=0.173  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC-C----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g-~----  224 (284)
                      .|.++.|+| .|.+|...+++++. +|.+++..+............+...   .  +++.+.-...|+|..+.. +    
T Consensus        46 ~g~tvgIiG-~G~IG~~va~~l~~-fg~~v~~~d~~~~~~~~~~~~~~~~---~--~~l~~ll~~sD~v~l~~plt~~T~  118 (191)
T d1gdha1          46 DNKTLGIYG-FGSIGQALAKRAQG-FDMDIDYFDTHRASSSDEASYQATF---H--DSLDSLLSVSQFFSLNAPSTPETR  118 (191)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHT-TTCEEEEECSSCCCHHHHHHHTCEE---C--SSHHHHHHHCSEEEECCCCCTTTT
T ss_pred             cccceEEee-cccchHHHHHHHHh-hccccccccccccccchhhcccccc---c--CCHHHHHhhCCeEEecCCCCchHh
Confidence            378999999 99999999999999 5999999987554333322222111   0  123333455787766543 1    


Q ss_pred             ---cHHHHHhhccCCEEEEEc
Q 023273          225 ---CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g  242 (284)
                         -...++.|+++..+|-++
T Consensus       119 ~li~~~~l~~mk~~a~lIN~s  139 (191)
T d1gdha1         119 YFFNKATIKSLPQGAIVVNTA  139 (191)
T ss_dssp             TCBSHHHHTTSCTTEEEEECS
T ss_pred             heecHHHhhCcCCccEEEecC
Confidence               167888888888887665

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=93.38  E-value=0.85  Score=32.19  Aligned_cols=51  Identities=18%  Similarity=0.222  Sum_probs=40.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (284)
                      ++|.|+|+.|.+|.+.+...+.. |..|.+.+++++........+++.++..
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~-G~~V~~~d~~~~~~~~~~~~~~~~v~~~   60 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRAS-GYPISILDREDWAVAESILANADVVIVS   60 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTCGGGHHHHHTTCSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHc-CCCcEecccccccccchhhhhccccccc
Confidence            58999998899999999988884 9999999998777666655566655443

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.38  E-value=0.091  Score=39.30  Aligned_cols=105  Identities=25%  Similarity=0.275  Sum_probs=68.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC-C---
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q---  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g-~---  224 (284)
                      ..+.++.|+| .|.+|...+++++. ++.+|+..++..++.... ..+.. .     ..+.+.-+..|+|.-+.. +   
T Consensus        42 l~~k~vgiiG-~G~IG~~va~~~~~-fg~~v~~~d~~~~~~~~~-~~~~~-~-----~~l~ell~~sDiv~~~~Plt~~T  112 (184)
T d1ygya1          42 IFGKTVGVVG-LGRIGQLVAQRIAA-FGAYVVAYDPYVSPARAA-QLGIE-L-----LSLDDLLARADFISVHLPKTPET  112 (184)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHT-TTCEEEEECTTSCHHHHH-HHTCE-E-----CCHHHHHHHCSEEEECCCCSTTT
T ss_pred             ccceeeeecc-ccchhHHHHHHhhh-ccceEEeecCCCChhHHh-hcCce-e-----ccHHHHHhhCCEEEEcCCCCchh
Confidence            3578999999 89999999999999 599999998765443322 22221 1     123333456788876654 1   


Q ss_pred             ----cHHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHHHHHHHHHHCCCee
Q 023273          225 ----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (284)
Q Consensus       225 ----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  274 (284)
                          -...++.|+++..+|-++-..-            =+-+.+++.+++|+|.
T Consensus       113 ~~lin~~~l~~mk~~a~lIN~sRG~i------------Vde~aL~~aL~~~~i~  154 (184)
T d1ygya1         113 AGLIDKEALAKTKPGVIIVNAARGGL------------VDEAALADAITGGHVR  154 (184)
T ss_dssp             TTCBCHHHHTTSCTTEEEEECSCTTS------------BCHHHHHHHHHTSSEE
T ss_pred             hhhhhHHHHhhhCCCceEEEecchhh------------hhhHHHHHHHhcCcEe
Confidence                1688889998888887652221            0123556666777764

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.36  E-value=0.18  Score=36.58  Aligned_cols=45  Identities=22%  Similarity=0.211  Sum_probs=37.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD  198 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~  198 (284)
                      .+|-++| .|.+|...+.-+... |..|.+.++++++.+.+...+..
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~~-g~~v~~~d~~~~~~~~~~~~~~~   46 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLKA-GYLLNVFDLVQSAVDGLVAAGAS   46 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHTTCE
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHC-CCeEEEEECchhhhhhhhhhhcc
Confidence            3688999 999999877766663 99999999999998888777643

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.35  E-value=0.042  Score=43.52  Aligned_cols=34  Identities=24%  Similarity=0.230  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      +++|+|+| +|..|++|+..++.. |.+|.+++.++
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~-G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIH-GLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTT-SCEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence            57899999 899999999998884 99999998754

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=93.28  E-value=0.1  Score=38.30  Aligned_cols=99  Identities=20%  Similarity=0.280  Sum_probs=59.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC--ChhhHHHHHHc----C---CcE-------EeeC---------CCcc
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS--STAKLDLLRSL----G---ADL-------AIDY---------TKEN  207 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~--~~~~~~~~~~~----g---~~~-------~~~~---------~~~~  207 (284)
                      +|.|.| =|.+|+++.+.+......+++++..  +.+.+..+-++    |   .+.       +++.         +...
T Consensus         3 kigING-FGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~   81 (166)
T d1gado1           3 KVGING-FGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN   81 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHH
Confidence            578888 9999999999888743456555543  33333333332    1   110       0110         0111


Q ss_pred             cccCCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCceeE
Q 023273          208 IEDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASSF  252 (284)
Q Consensus       208 ~~~~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~  252 (284)
                      +++...++|+||||+|-   .+.+...+..+.+=|+++.|.......+
T Consensus        82 i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~~d~~~~i  129 (166)
T d1gado1          82 LKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMF  129 (166)
T ss_dssp             GCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBC
T ss_pred             CCccccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccccccCCEE
Confidence            11113379999999995   3677788888888888887764433333

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.26  E-value=0.075  Score=43.61  Aligned_cols=97  Identities=21%  Similarity=0.172  Sum_probs=61.1

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc---EEeeCCCcc----cccCCCc
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKEN----IEDLPEK  214 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~----~~~~~~~  214 (284)
                      ..+++|++||=.++  ++|..++.+|+. ++.+|+.++.+++..+.+++    .|..   +++..+..+    +....+.
T Consensus       141 ~~~~~g~~VLDl~~--g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~  217 (324)
T d2as0a2         141 KWVQPGDRVLDVFT--YTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEK  217 (324)
T ss_dssp             GGCCTTCEEEETTC--TTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCC
T ss_pred             hhcCCCCeeecccC--cccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCC
Confidence            34678999988873  455566666665 45689999999998887753    3432   222221111    1223567


Q ss_pred             ccEEEeCC---C-C--------------cHHHHHhhccCCEEEEEcCCC
Q 023273          215 FDVVFDAV---G-Q--------------CDKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       215 ~d~vid~~---g-~--------------~~~~~~~l~~~G~~v~~g~~~  245 (284)
                      ||+|+--.   + +              ...++++|+++|.++.+....
T Consensus       218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s~  266 (324)
T d2as0a2         218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ  266 (324)
T ss_dssp             EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred             CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence            99987422   2 1              145678999999999876443

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=93.21  E-value=0.12  Score=40.97  Aligned_cols=37  Identities=19%  Similarity=0.176  Sum_probs=28.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC-hhhHHH
Q 023273          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-TAKLDL  191 (284)
Q Consensus       154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~-~~~~~~  191 (284)
                      +||+|+++++|++.++.+... |++|++..++ +++.+.
T Consensus         5 AlITGas~GIG~aiA~~la~~-Ga~V~i~~~~~~~~~~~   42 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAE-GYAVCLHYHRSAAEANA   42 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCCHHHHHH
Confidence            588999999999988887774 9999988764 444433

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.08  E-value=0.099  Score=41.40  Aligned_cols=91  Identities=15%  Similarity=0.148  Sum_probs=59.6

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC---cEEeeCCCcccccCCCcccEEE
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA---DLAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      .+++|++||-.++  ++|..++.+|+. ++++|++++.+++..+.+++    .+.   -.+++.+...+.. ...+|.|+
T Consensus       104 ~~~~g~~VlD~~a--G~G~~~l~~a~~-~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~~-~~~~D~Ii  179 (260)
T d2frna1         104 VAKPDELVVDMFA--GIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRIL  179 (260)
T ss_dssp             HCCTTCEEEETTC--TTTTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEE
T ss_pred             hcCCccEEEECcc--eEcHHHHHHHHh-CCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhcc-CCCCCEEE
Confidence            4689999999874  556666777776 56899999999998877753    232   2334333222222 34588665


Q ss_pred             eC-CCC----cHHHHHhhccCCEEEEE
Q 023273          220 DA-VGQ----CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       220 d~-~g~----~~~~~~~l~~~G~~v~~  241 (284)
                      -. -..    +..+++.++++|.+...
T Consensus       180 ~~~p~~~~~~l~~a~~~l~~gG~lh~~  206 (260)
T d2frna1         180 MGYVVRTHEFIPKALSIAKDGAIIHYH  206 (260)
T ss_dssp             ECCCSSGGGGHHHHHHHEEEEEEEEEE
T ss_pred             ECCCCchHHHHHHHHhhcCCCCEEEEE
Confidence            43 222    36788999999987543

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=93.06  E-value=0.68  Score=33.75  Aligned_cols=93  Identities=18%  Similarity=0.172  Sum_probs=59.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcCC-------cE-------Eee--------C-CCc
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGA-------DL-------AID--------Y-TKE  206 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~-------~~-------~~~--------~-~~~  206 (284)
                      +|.|.| -|.+|+++.+.+......+++++-.   +.+...++-++..       +.       +++        . +..
T Consensus         3 kIgING-FGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p~   81 (169)
T d1u8fo1           3 KVGVNG-FGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS   81 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             EEEEEC-CcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCChh
Confidence            678988 9999999999887754567666633   3445555533211       00       011        1 112


Q ss_pred             ccccCCCcccEEEeCCCCc---HHHHHhhccCCEEEEEcCCCC
Q 023273          207 NIEDLPEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVT  246 (284)
Q Consensus       207 ~~~~~~~~~d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~  246 (284)
                      ..+....++|+|+||+|-+   +.+...+..+-+-|+++.|..
T Consensus        82 ~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~~  124 (169)
T d1u8fo1          82 KIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSA  124 (169)
T ss_dssp             GCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCS
T ss_pred             hCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeeccccc
Confidence            2222245899999999953   667778888888888877653

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=92.98  E-value=0.91  Score=35.94  Aligned_cols=96  Identities=15%  Similarity=0.277  Sum_probs=64.9

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcCCcEEeeCCCccccc----------
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAIDYTKENIED----------  210 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~----------  210 (284)
                      +.....++.+|+.. ++|..|.+++..|+.+ |.+.+++..   ++.|.+.++.+|++.++.........          
T Consensus        53 ~~g~~~~~~~vv~a-SsGN~g~a~A~~a~~~-G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~  130 (292)
T d2bhsa1          53 KRGEIKPGDVLIEA-TSGNTGIALAMIAALK-GYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMAN  130 (292)
T ss_dssp             HTTSCCTTSEEEEE-CCSHHHHHHHHHHHHH-TCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHH
T ss_pred             HhCCcCCCceeeee-cccchhHHHHHHHHhc-CcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccc
Confidence            44555666655554 4999999999999996 887776654   77788999999987443221110000          


Q ss_pred             ------------------------------CCCcccEEEeCCCC------cHHHHHhhccCCEEEEE
Q 023273          211 ------------------------------LPEKFDVVFDAVGQ------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       211 ------------------------------~~~~~d~vid~~g~------~~~~~~~l~~~G~~v~~  241 (284)
                                                    .++.+|.++.++|+      ....++.+.+..+++.+
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~V  197 (292)
T d2bhsa1         131 RGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGL  197 (292)
T ss_dssp             HTSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEE
T ss_pred             cccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEe
Confidence                                          03358999998874      24566667788888766

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.97  E-value=0.054  Score=44.82  Aligned_cols=73  Identities=22%  Similarity=0.243  Sum_probs=46.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE--eeCCC-cccccCCCcccEEEeCCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA--IDYTK-ENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~--~~~~~-~~~~~~~~~~d~vid~~g  223 (284)
                      ..+++|||+||+|-+|...+..+... |.+|+++++...+... ........  .|... +.+....+++|.|+.+++
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~-g~~V~~~d~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~   88 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHE-GHYVIASDWKKNEHMT-EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA   88 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCSSSC-GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEeCCCccchh-hhcccCcEEEeechhHHHHHHHhhcCCeEeeccc
Confidence            36889999999999999999998884 9999999864332111 11111122  12111 112222468999998875

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=92.96  E-value=0.066  Score=43.78  Aligned_cols=72  Identities=15%  Similarity=0.080  Sum_probs=44.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCC---Cccc-ccCCCcccEEEeCCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYT---KENI-EDLPEKFDVVFDAVG  223 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~---~~~~-~~~~~~~d~vid~~g  223 (284)
                      ++|||+||+|-+|...++.+...+..+|++++....+.........-..+.-+   ...+ ....+++|+|+.+++
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~   76 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccc
Confidence            47999999999999988877664236899888765544433222111222211   1111 113457999999876

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=92.93  E-value=0.25  Score=36.29  Aligned_cols=43  Identities=19%  Similarity=0.196  Sum_probs=36.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG  196 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g  196 (284)
                      .+|-++| .|.+|...+.-+.. .|.+|++.++++++.+.+.+.+
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~-~G~~V~v~dr~~~~~~~l~~~~   45 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMND-HGFVVCAFNRTVSKVDDFLANE   45 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHH-TTCCEEEECSSTHHHHHHHHTT
T ss_pred             CcEEEEe-EhHHHHHHHHHHHH-CCCeEEEEcCCHHHHHHHHHhc
Confidence            4688999 89999988877777 4999999999999998886554

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.80  E-value=0.054  Score=40.36  Aligned_cols=35  Identities=17%  Similarity=0.202  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChh
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTA  187 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~  187 (284)
                      +++|+|+| +|+.|+.++..++.. |. .|.++++++.
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~-G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARL-GYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHT-TCCCEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHC-CCCeEEEEEecCc
Confidence            67899999 899999999999985 87 4888887654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.70  E-value=0.072  Score=41.54  Aligned_cols=35  Identities=17%  Similarity=0.188  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      ..++|+|+| +|+.|++++..++.. |.+|+++++++
T Consensus         3 ~~~kV~IiG-aG~aGl~~A~~L~~~-G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVG-GSISGLTAALMLRDA-GVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred             CCCcEEEEC-cCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence            467899999 899999999888884 99999999754

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.65  E-value=1.4  Score=35.95  Aligned_cols=55  Identities=25%  Similarity=0.411  Sum_probs=42.7

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcCCcEE
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLA  200 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~  200 (284)
                      +...++++..|+... +|..|.+++.+|+.+ |.+.+++..   +++|.+.++.+|++.+
T Consensus        90 ~~g~~~~~~~vv~aS-sGN~g~a~A~~a~~~-Gi~~~iv~p~~~~~~k~~~i~~~GA~vv  147 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPT-SGNTGIGLALAAAVR-GYRCIIVMPEKMSSEKVDVLRALGAEIV  147 (355)
T ss_dssp             HHTCSCTTCEEEEEC-SSHHHHHHHHHHHHH-TCEEEEEECSCCCHHHHHHHHHTTCEEE
T ss_pred             HcCCcccCceEEEec-ccchhhHHHHHHHhc-cCCeEEEeeccchHHHHHHHHhcCCeEE
Confidence            445666766655544 899999999999996 988777754   6778999999998754

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.58  E-value=0.33  Score=34.84  Aligned_cols=89  Identities=18%  Similarity=0.263  Sum_probs=59.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChh--h-HHHHHHcCCcEEeeCCCccccc-----------------
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTA--K-LDLLRSLGADLAIDYTKENIED-----------------  210 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~--~-~~~~~~~g~~~~~~~~~~~~~~-----------------  210 (284)
                      ++|.|+|++|.+|..+..+.+... .++|+.+.....  + .++++++.+..++-.++.....                 
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            368999999999999999998843 367777765332  2 3555678877664433211100                 


Q ss_pred             --------CCCcccEEEeCCCC---cHHHHHhhccCCEEEE
Q 023273          211 --------LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVS  240 (284)
Q Consensus       211 --------~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~  240 (284)
                              ....+|+|+.+.-+   +.-.+..++.+-++.+
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence                    02368999998543   5778888888776654

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=92.47  E-value=0.17  Score=37.99  Aligned_cols=87  Identities=22%  Similarity=0.305  Sum_probs=58.8

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC---
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG---  223 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g---  223 (284)
                      .+.++++||-+|+ | .|..+..+      .+++.++.+++..+.+++.+.. ++..+..++....+.+|+|+....   
T Consensus        33 ~~~~~~~vLDiGc-G-~G~~~~~~------~~~~giD~s~~~~~~a~~~~~~-~~~~d~~~l~~~~~~fD~I~~~~~l~h  103 (208)
T d1vlma_          33 CLLPEGRGVEIGV-G-TGRFAVPL------KIKIGVEPSERMAEIARKRGVF-VLKGTAENLPLKDESFDFALMVTTICF  103 (208)
T ss_dssp             HHCCSSCEEEETC-T-TSTTHHHH------TCCEEEESCHHHHHHHHHTTCE-EEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred             hhCCCCeEEEECC-C-Cccccccc------ceEEEEeCChhhcccccccccc-ccccccccccccccccccccccccccc
Confidence            4567788999994 3 35433322      3467899999999999886543 344433334433567999987533   


Q ss_pred             --C----cHHHHHhhccCCEEEEEc
Q 023273          224 --Q----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       224 --~----~~~~~~~l~~~G~~v~~g  242 (284)
                        +    ++.+.+.|+++|++++..
T Consensus       104 ~~d~~~~l~~~~~~L~pgG~l~i~~  128 (208)
T d1vlma_         104 VDDPERALKEAYRILKKGGYLIVGI  128 (208)
T ss_dssp             SSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccchhhhhhcCCCCceEEEEe
Confidence              2    267889999999998764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=92.44  E-value=0.081  Score=43.45  Aligned_cols=40  Identities=33%  Similarity=0.386  Sum_probs=34.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHH
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD  190 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~  190 (284)
                      ..++|+|+||+|.+|...+..+... |.+|++++++.++..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~   41 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAV-GHHVRAQVHSLKGLI   41 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCSCSHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhC-CCeEEEEECCcchhh
Confidence            4678999999999999999999885 999999999766543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=92.40  E-value=0.081  Score=43.36  Aligned_cols=38  Identities=21%  Similarity=0.293  Sum_probs=33.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      .+++|||+||+|-+|...++.+... |.+|+++++.+.+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~-g~~V~~~~r~~~~   44 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTM-GATVKGYSLTAPT   44 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCCc
Confidence            4689999999999999999999985 9999999986553

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=92.32  E-value=0.15  Score=38.39  Aligned_cols=86  Identities=26%  Similarity=0.308  Sum_probs=56.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC-C---
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q---  224 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g-~---  224 (284)
                      -.|.+|.|+| .|.+|...++.++. +|++|+..++...+.. ....+....     .++.+.-...|+|.-+.. +   
T Consensus        47 L~gktvgIiG-~G~IG~~va~~l~~-fg~~v~~~d~~~~~~~-~~~~~~~~~-----~~l~~ll~~sD~i~~~~plt~~T  118 (193)
T d1mx3a1          47 IRGETLGIIG-LGRVGQAVALRAKA-FGFNVLFYDPYLSDGV-ERALGLQRV-----STLQDLLFHSDCVTLHCGLNEHN  118 (193)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHT-TTCEEEEECTTSCTTH-HHHHTCEEC-----SSHHHHHHHCSEEEECCCCCTTC
T ss_pred             eeCceEEEec-cccccccceeeeec-cccceeeccCcccccc-hhhhccccc-----cchhhccccCCEEEEeecccccc
Confidence            4678999999 99999999999999 5999999987544322 222222111     112223345677665543 1   


Q ss_pred             ----cHHHHHhhccCCEEEEEc
Q 023273          225 ----CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ----~~~~~~~l~~~G~~v~~g  242 (284)
                          -...+..|+++..+|-++
T Consensus       119 ~~li~~~~l~~mk~~a~lIN~s  140 (193)
T d1mx3a1         119 HHLINDFTVKQMRQGAFLVNTA  140 (193)
T ss_dssp             TTSBSHHHHTTSCTTEEEEECS
T ss_pred             hhhhhHHHHhccCCCCeEEecC
Confidence                156777888887777665

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.24  E-value=1.2  Score=32.58  Aligned_cols=87  Identities=17%  Similarity=0.190  Sum_probs=55.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEE-eCChhhHHHH-HHcCC---cEEeeCCCcccccC--CCcccEEEeCCCC-
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL-RSLGA---DLAIDYTKENIEDL--PEKFDVVFDAVGQ-  224 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~~~~-~~~g~---~~~~~~~~~~~~~~--~~~~d~vid~~g~-  224 (284)
                      ++.|+| +|.+|..-+...+...+.+++.+ +.++++.+.+ ++++.   ..+++.    +.+.  ...+|+|+-++.. 
T Consensus         3 ki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~ll~~~~iD~v~I~tp~~   77 (184)
T d1ydwa1           3 RIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGS----YESLLEDPEIDALYVPLPTS   77 (184)
T ss_dssp             EEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESS----HHHHHHCTTCCEEEECCCGG
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecCc----HHHhhhccccceeeecccch
Confidence            678999 89999887777776546677744 5677765554 45552   222221    2221  3579999998874 


Q ss_pred             --cHHHHHhhccCCEEEEEcCCC
Q 023273          225 --CDKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       225 --~~~~~~~l~~~G~~v~~g~~~  245 (284)
                        .+.+..++..+ +=|++.-|-
T Consensus        78 ~h~~~~~~~l~~g-~~v~~EKP~   99 (184)
T d1ydwa1          78 LHVEWAIKAAEKG-KHILLEKPV   99 (184)
T ss_dssp             GHHHHHHHHHTTT-CEEEECSSC
T ss_pred             hhcchhhhhhhcc-ceeeccccc
Confidence              46677777754 666676553

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=92.14  E-value=0.1  Score=41.79  Aligned_cols=38  Identities=29%  Similarity=0.286  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       150 ~g~~vlI~ga~g--~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      .|+++||+|++|  ++|++.++.+... |++|++..++++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~-Ga~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAA-GAEILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHT-TCEEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEeCchhh
Confidence            688999999876  8999988888884 9999998876543

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.12  E-value=0.15  Score=38.32  Aligned_cols=39  Identities=26%  Similarity=0.326  Sum_probs=32.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      ++|.|+| +|.+|...+.++.. .|++|++.+.+++.++.+
T Consensus         5 kkvaViG-aG~mG~~iA~~~a~-~G~~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIG-GGLMGAGIAQVAAA-TGHTVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHH
T ss_pred             EEEEEEC-cCHHHHHHHHHHHh-CCCcEEEEECChHHHHHH
Confidence            4799999 79999997777777 499999999998876554

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=92.09  E-value=0.31  Score=36.12  Aligned_cols=92  Identities=15%  Similarity=0.126  Sum_probs=55.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh---HHHHH-HcCCcEEeeCCCcccccCCCcccEEEeCCCC--c
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK---LDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--C  225 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~---~~~~~-~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~--~  225 (284)
                      -+|.|+||+|-+|.-.++++..+...++..+..+...   ..... .+...... ...........++|++|.+..+  .
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dvvf~alp~~~s   84 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLP-NLVAVKDADFSNVDAVFCCLPHGTT   84 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCC-CCBCGGGCCGGGCSEEEECCSSSHH
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccc-cchhhhhhhhcccceeeeccccchH
Confidence            3789999999999999999987655666655433221   22111 11110000 0001111123579999999885  4


Q ss_pred             HHHHHhhccCCEEEEEcCC
Q 023273          226 DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       226 ~~~~~~l~~~G~~v~~g~~  244 (284)
                      ......+...+..+.....
T Consensus        85 ~~~~~~l~~~~~~v~~~~~  103 (183)
T d2cvoa1          85 QEIIKGLPQELKIVDLSAD  103 (183)
T ss_dssp             HHHHHTSCSSCEEEECSST
T ss_pred             HHHHHHHHhcCcccccchh
Confidence            5666778888888876543

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=92.03  E-value=0.42  Score=35.11  Aligned_cols=102  Identities=18%  Similarity=0.179  Sum_probs=60.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhc---CCeEEEEeC--ChhhHHHHHHcC-------CcE-------Ee--------eC-C
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVF---GASKVAATS--STAKLDLLRSLG-------ADL-------AI--------DY-T  204 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~---g~~vi~~~~--~~~~~~~~~~~g-------~~~-------~~--------~~-~  204 (284)
                      +|.|.| =|-+|+++.+.+....   ...++.+-.  +.+....+-++.       ...       ++        .. +
T Consensus         3 kigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAING-YGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            678888 9999999998876421   234444432  333344442221       110       11        11 1


Q ss_pred             CcccccCCCcccEEEeCCCCc---HHHHHhhccCCEEEEEcCCCCC-CceeEEEe
Q 023273          205 KENIEDLPEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTP-PASSFVLT  255 (284)
Q Consensus       205 ~~~~~~~~~~~d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~  255 (284)
                      ...+++...++|+||||+|.+   ..+...|..+.+-|+++.|... ...+++++
T Consensus        82 p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~~~~~d~tiV~G  136 (173)
T d1obfo1          82 PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYG  136 (173)
T ss_dssp             GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTT
T ss_pred             HHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCCCCCCcceEEEe
Confidence            122333345899999999963   6778899999888888877643 23444443

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=91.99  E-value=0.35  Score=32.83  Aligned_cols=34  Identities=21%  Similarity=0.234  Sum_probs=29.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      .++++|+| +|.+|+-++..++.+ |.+|.++.+.+
T Consensus        21 p~~vvIiG-gG~ig~E~A~~l~~~-G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVG-AGYIGVELGGVINGL-GAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred             CCEEEEEC-CChhhHHHHHHhhcc-ccEEEEEeecc
Confidence            46899999 899999999999885 99999998764

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=91.96  E-value=0.72  Score=30.13  Aligned_cols=70  Identities=20%  Similarity=0.217  Sum_probs=49.2

Q ss_pred             cCCCCEEEEEcCCchHHHHH-HHHHHHhcCCeEEEEeCC-hhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC
Q 023273          148 FSAGKSILVLGGAGGVGTMV-IQLAKHVFGASKVAATSS-TAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a-~~~a~~~~g~~vi~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      .+..+++.++| -|++|..+ +++++.. |+.|...+.. ....+.+++.|......++...    ..+.|+++-+.+
T Consensus         5 ~~~~~~ihfiG-igG~GMs~LA~~L~~~-G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~----i~~~d~vV~S~A   76 (96)
T d1p3da1           5 MRRVQQIHFIG-IGGAGMSGIAEILLNE-GYQISGSDIADGVVTQRLAQAGAKIYIGHAEEH----IEGASVVVVSSA   76 (96)
T ss_dssp             CTTCCEEEEET-TTSTTHHHHHHHHHHH-TCEEEEEESCCSHHHHHHHHTTCEEEESCCGGG----GTTCSEEEECTT
T ss_pred             chhCCEEEEEE-ECHHHHHHHHHHHHhC-CCEEEEEeCCCChhhhHHHHCCCeEEECCcccc----CCCCCEEEECCC
Confidence            35567899999 88899776 7888885 9999999985 3345666778875444333322    256888877665

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.93  E-value=0.18  Score=36.26  Aligned_cols=82  Identities=20%  Similarity=0.273  Sum_probs=52.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcEEeeCCCcccccCCCcccEEEeCCCC--cHHHH
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CDKAL  229 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~  229 (284)
                      +|.++| +|.+|.+.+.-... .+.++++..++.++.+.+ +++|.... .    +..+..+..|+||=|+-.  .+..+
T Consensus         2 kIg~IG-~G~mG~al~~~l~~-~~~~i~v~~r~~~~~~~l~~~~g~~~~-~----~~~~~~~~~dvIilavkp~~~~~vl   74 (152)
T d2ahra2           2 KIGIIG-VGKMASAIIKGLKQ-TPHELIISGSSLERSKEIAEQLALPYA-M----SHQDLIDQVDLVILGIKPQLFETVL   74 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTT-SSCEEEEECSSHHHHHHHHHHHTCCBC-S----SHHHHHHTCSEEEECSCGGGHHHHH
T ss_pred             EEEEEe-ccHHHHHHHHHHHh-CCCeEEEEcChHHhHHhhccccceeee-c----hhhhhhhccceeeeecchHhHHHHh
Confidence            688899 99999988776665 388999999998887776 45664322 1    112222456777766542  24555


Q ss_pred             HhhccCCEEEEE
Q 023273          230 KAVKEGGRVVSI  241 (284)
Q Consensus       230 ~~l~~~G~~v~~  241 (284)
                      +.+.++-.++.+
T Consensus        75 ~~l~~~~~iis~   86 (152)
T d2ahra2          75 KPLHFKQPIISM   86 (152)
T ss_dssp             TTSCCCSCEEEC
T ss_pred             hhcccceeEecc
Confidence            555555555443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=91.74  E-value=0.15  Score=41.50  Aligned_cols=32  Identities=22%  Similarity=0.340  Sum_probs=28.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~  184 (284)
                      ++|||+||+|-+|...+..+... |.+|+++++
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~-g~~V~~~d~   32 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDN   32 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC-cCEEEEEEC
Confidence            46999999999999999998885 899999875

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=91.69  E-value=0.29  Score=35.75  Aligned_cols=94  Identities=20%  Similarity=0.194  Sum_probs=58.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcCC-------cE-------EeeC---------CCc
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGA-------DL-------AIDY---------TKE  206 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~-------~~-------~~~~---------~~~  206 (284)
                      +|-|.| =|.+|+++.+.+.......++.+-.   +.+....+-++..       ..       +++.         +..
T Consensus         2 kigING-fGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~   80 (166)
T d2b4ro1           2 KLGING-FGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPS   80 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGG
T ss_pred             eEEEEC-CCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCChH
Confidence            577888 8999999999887643455555532   3445555533221       10       0110         011


Q ss_pred             ccccCCCcccEEEeCCCCc---HHHHHhhccCCEEEEEcCCCCC
Q 023273          207 NIEDLPEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTP  247 (284)
Q Consensus       207 ~~~~~~~~~d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~~  247 (284)
                      ..++...++|+|+||+|.+   +.+...|..+.+-|+++.|...
T Consensus        81 ~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~kd  124 (166)
T d2b4ro1          81 QIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKD  124 (166)
T ss_dssp             GCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSS
T ss_pred             HccccccCCCEEEEecccccchhhhhhhhccCCCEEEEeccccc
Confidence            1111133899999999963   6778888988877888777643

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=91.66  E-value=0.97  Score=29.03  Aligned_cols=66  Identities=20%  Similarity=0.275  Sum_probs=46.6

Q ss_pred             CEEEEEcCCchHHHHH-HHHHHHhcCCeEEEEeCCh-hhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC
Q 023273          152 KSILVLGGAGGVGTMV-IQLAKHVFGASKVAATSST-AKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a-~~~a~~~~g~~vi~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      .+|-++| -|++|..+ +++++.. |+.|...+..+ +..+.+++.|.......+.+.+    .+.|+|+-+.+
T Consensus         2 ~~ihfiG-IgG~GMs~LA~~L~~~-G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~i----~~~d~vV~SsA   69 (89)
T d1j6ua1           2 MKIHFVG-IGGIGMSAVALHEFSN-GNDVYGSNIEETERTAYLRKLGIPIFVPHSADNW----YDPDLVIKTPA   69 (89)
T ss_dssp             CEEEEET-TTSHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHTTCCEESSCCTTSC----CCCSEEEECTT
T ss_pred             cEEEEEe-ECHHHHHHHHHHHHhC-CCeEEEEeCCCChhHHHHHHCCCeEEeeeccccc----CCCCEEEEecC
Confidence            4677788 78899865 6777774 99999999854 4567788999765444333332    46898887665

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.65  E-value=0.96  Score=32.04  Aligned_cols=72  Identities=19%  Similarity=0.229  Sum_probs=43.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcC--CeEEEEeCChhhHH-HHHHc------CCcEEeeCCCcccccCCCcccEEE
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLD-LLRSL------GADLAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~~~~~~~-~~~~~------g~~~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      ..+.+|.|+| +|.+|..++..+... +  -+++.++..+++.+ .+.++      ....+... ..++.. ..+.|+++
T Consensus         4 ~~~~KI~IiG-aG~vG~~~a~~l~~~-~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~-~~d~~~-l~daDvvv   79 (148)
T d1ldna1           4 NGGARVVVIG-AGFVGASYVFALMNQ-GIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-HGDYDD-CRDADLVV   79 (148)
T ss_dssp             TTSCEEEEEC-CSHHHHHHHHHHHHH-TCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-ECCGGG-TTTCSEEE
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHhc-CCCceEEEEeeccccccchhccHhhCccccCCCeEEE-ECCHHH-hccceeEE
Confidence            4567899999 599999888777764 4  35778888777632 11121      11111111 122222 46899999


Q ss_pred             eCCCC
Q 023273          220 DAVGQ  224 (284)
Q Consensus       220 d~~g~  224 (284)
                      -++|.
T Consensus        80 itag~   84 (148)
T d1ldna1          80 ICAGA   84 (148)
T ss_dssp             ECCSC
T ss_pred             Eeccc
Confidence            98873

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=91.64  E-value=0.34  Score=35.45  Aligned_cols=101  Identities=19%  Similarity=0.237  Sum_probs=59.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhc--CCeEEEEeC--ChhhHHHHHHc----C---CcE-------Eee--------CC-C
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVF--GASKVAATS--STAKLDLLRSL----G---ADL-------AID--------YT-K  205 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~--g~~vi~~~~--~~~~~~~~~~~----g---~~~-------~~~--------~~-~  205 (284)
                      +|.|.| -|-+|+.+.+.+....  ...++.+-.  +.+....+-++    |   .+.       +++        .+ .
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            678888 9999999999877532  356665533  34444444332    1   110       011        00 0


Q ss_pred             cccccCCCcccEEEeCCCCc---HHHHHhhccCCEEEEEcCCCCCCceeEEE
Q 023273          206 ENIEDLPEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTPPASSFVL  254 (284)
Q Consensus       206 ~~~~~~~~~~d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~~~~~~~~~  254 (284)
                      ..+++...++|+||||+|.+   +.+...+..+-+-|+++.|......++++
T Consensus        81 ~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~kd~~~tiV~  132 (169)
T d1hdgo1          81 SKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVI  132 (169)
T ss_dssp             GGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCT
T ss_pred             hhCCccccCCCEEEEecceeccccchhhhccCCCceEEEecccCCCcceeEE
Confidence            11111123799999999963   67777888887777787776544444443

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.49  E-value=0.13  Score=41.24  Aligned_cols=37  Identities=22%  Similarity=0.270  Sum_probs=31.3

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      ....++|+|+| +|..|+.++..+... |.+|.+++.++
T Consensus        27 ~~~pkkV~IIG-aG~aGLsaA~~L~~~-G~~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVG-AGMAGLSAAYVLAGA-GHQVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEEC-CBHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred             CCCCCeEEEEC-CCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence            44567999999 899999999888885 99999998754

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.43  E-value=0.16  Score=40.51  Aligned_cols=91  Identities=18%  Similarity=0.158  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC----------------cEEeeCCCcccccCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA----------------DLAIDYTKENIEDLP  212 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~----------------~~~~~~~~~~~~~~~  212 (284)
                      ...++|||+|+.  .|..+-.+++. ...++.+++.+++=.+.++++-.                .+++..+...+.+..
T Consensus        71 ~~p~~vLiiG~G--~G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l~~~  147 (276)
T d1mjfa_          71 PKPKRVLVIGGG--DGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNN  147 (276)
T ss_dssp             SCCCEEEEEECT--TSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHC
T ss_pred             CCCceEEEecCC--chHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHHHhcc
Confidence            456789999843  33444555565 45688899999988888875321                022222211121225


Q ss_pred             CcccEEE-eCCCC------------cHHHHHhhccCCEEEEEc
Q 023273          213 EKFDVVF-DAVGQ------------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       213 ~~~d~vi-d~~g~------------~~~~~~~l~~~G~~v~~g  242 (284)
                      +.+|+|| |....            ++.+.++|+++|.++.=+
T Consensus       148 ~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         148 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            6799876 44331            267889999999998643

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.40  E-value=0.32  Score=38.78  Aligned_cols=31  Identities=13%  Similarity=0.197  Sum_probs=23.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEe
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAAT  183 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~  183 (284)
                      +.|||+||++++|++.+...... |++++.+.
T Consensus         3 kVvlITGassGIG~a~A~~la~~-Ga~v~~v~   33 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASD-PSQSFKVY   33 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTC-TTCCEEEE
T ss_pred             CEEEEccCCCHHHHHHHHHHHHC-CCCeEEEE
Confidence            34688899999999988877764 87755443

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.32  E-value=0.4  Score=36.95  Aligned_cols=67  Identities=19%  Similarity=0.191  Sum_probs=48.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEeeCCCcccccCCCcccEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~d~vid~~  222 (284)
                      -.|.+|+|.| -|.+|..+++++... |+++++++.+..+.+.+. ..+... ++.+ +   -....+|+++=|+
T Consensus        37 l~g~~v~IqG-~GnVG~~~a~~L~~~-Gakvv~~d~~~~~~~~~~~~~g~~~-~~~~-~---~~~~~cDIl~PcA  104 (230)
T d1leha1          37 LEGLAVSVQG-LGNVAKALCKKLNTE-GAKLVVTDVNKAAVSAAVAEEGADA-VAPN-A---IYGVTCDIFAPCA  104 (230)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCCEE-CCGG-G---TTTCCCSEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEeecccHHHHHHHHHhcCCcc-cCCc-c---cccccccEecccc
Confidence            4689999999 999999999999995 999999999888877665 455432 2211 1   1133567666554

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=91.32  E-value=0.095  Score=41.76  Aligned_cols=36  Identities=17%  Similarity=0.401  Sum_probs=30.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      ...+|||+||+|-+|...+..+... |.+|+++++++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~   37 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISL-GHPTYVLFRPE   37 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCC
Confidence            3467999999999999999888885 89999998854

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.22  E-value=0.22  Score=38.21  Aligned_cols=129  Identities=19%  Similarity=0.184  Sum_probs=75.1

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCcEEeeCCCc----cccc-----
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADLAIDYTKE----NIED-----  210 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~----~~~~-----  210 (284)
                      ..+....++||-+|  ...|..++.+|+.+. +.+++.++.+++..+.+++    .|....+.....    ..+.     
T Consensus        54 L~~~~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~~~  131 (219)
T d2avda1          54 LARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAG  131 (219)
T ss_dssp             HHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTT
T ss_pred             HHHccCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhhhc
Confidence            45556778999998  567888888888753 5799999999998777754    343221211111    1111     


Q ss_pred             CCCcccEEE-eCCCC-----cHHHHHhhccCCEEEEEcCCCCCCceeEE-EeccHHHHHHHHHHHHCC-CeeE
Q 023273          211 LPEKFDVVF-DAVGQ-----CDKALKAVKEGGRVVSIIGSVTPPASSFV-LTSDGSILEKLNPYFESG-KVKA  275 (284)
Q Consensus       211 ~~~~~d~vi-d~~g~-----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g-~i~~  275 (284)
                      ....+|.|| |+.-.     ++.++++|+++|-++.=.......-..-. .....+.+.+..+++++. ++..
T Consensus       132 ~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn~l~~G~v~~~~~~d~~~~~ir~~~~~i~~d~r~~~  204 (219)
T d2avda1         132 EAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYI  204 (219)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEE
T ss_pred             ccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeCCcccCcccCcccCCHHHHHHHHHHHHHHhCCCEEE
Confidence            134699875 44332     37899999999999753221100000000 011234566777777654 3444

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.15  E-value=0.44  Score=32.21  Aligned_cols=35  Identities=20%  Similarity=0.288  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      .++++|+| +|.+|+-+++.+..+ |.+|.++.+.+.
T Consensus        22 p~~v~IiG-gG~ig~E~A~~l~~~-G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIG-GGYIGIELGTAYANF-GTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred             CCeEEEEC-CCccceeeeeeeccc-ccEEEEEEecce
Confidence            37899999 899999999999985 999999987654

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.15  E-value=0.48  Score=34.63  Aligned_cols=94  Identities=24%  Similarity=0.233  Sum_probs=61.3

Q ss_pred             hcccchHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccc
Q 023273          130 ASLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI  208 (284)
Q Consensus       130 a~~~~~~~ta~~al~~~~~-~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~  208 (284)
                      +.+||.....+..++..++ -.|++|+|+|.+..+|.-.+.+.... |+.|.++..........                
T Consensus        17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~-gatVt~~~~~t~~l~~~----------------   79 (170)
T d1a4ia1          17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-NATVTTCHSKTAHLDEE----------------   79 (170)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTCSSHHHH----------------
T ss_pred             CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhc-cCceEEEecccccHHHH----------------
Confidence            4456665555555554443 48999999999999999998888884 99999877644333211                


Q ss_pred             ccCCCcccEEEeCCCCcHH-HHHhhccCCEEEEEcC
Q 023273          209 EDLPEKFDVVFDAVGQCDK-ALKAVKEGGRVVSIIG  243 (284)
Q Consensus       209 ~~~~~~~d~vid~~g~~~~-~~~~l~~~G~~v~~g~  243 (284)
                         .+..|+++.++|.++. --+.++++-.++.+|.
T Consensus        80 ---~~~aDivi~a~G~~~~i~~~~vk~g~iviDvgi  112 (170)
T d1a4ia1          80 ---VNKGDILVVATGQPEMVKGEWIKPGAIVIDCGI  112 (170)
T ss_dssp             ---HTTCSEEEECCCCTTCBCGGGSCTTCEEEECCC
T ss_pred             ---HhhccchhhccccccccccccccCCCeEeccCc
Confidence               2346777777775322 1245666666666654

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=91.07  E-value=0.88  Score=33.14  Aligned_cols=92  Identities=23%  Similarity=0.305  Sum_probs=59.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcCC-------cE-------EeeC---------CCc
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGA-------DL-------AIDY---------TKE  206 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~-------~~-------~~~~---------~~~  206 (284)
                      +|-|.| =|.+|+++.+.+... +..++.+-.   +.+...++-++..       +.       +++.         +..
T Consensus         2 kIgING-fGRIGR~~~R~~~~~-~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~   79 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEM-GAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPE   79 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHH-TCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhC-CCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChH
Confidence            577888 999999999998885 777776643   3345555543221       10       0110         001


Q ss_pred             ccccCCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCC
Q 023273          207 NIEDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT  246 (284)
Q Consensus       207 ~~~~~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~  246 (284)
                      .+++...++|+||||+|.   .+.+...+..+.+-|+++.|..
T Consensus        80 ~i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~~  122 (169)
T d1dssg1          80 NIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSA  122 (169)
T ss_dssp             GCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCS
T ss_pred             HCCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCcc
Confidence            111113379999999995   3777888888888888877753

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.87  E-value=0.16  Score=39.14  Aligned_cols=38  Identities=18%  Similarity=0.295  Sum_probs=32.4

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      .+.+++|+|+| +|+.|+.++..++.. |.++.+++.+++
T Consensus        46 ~~~~k~VvIIG-aGpAGl~aA~~l~~~-G~~v~l~E~~~~   83 (233)
T d1djqa3          46 TKNKDSVLIVG-AGPSGSEAARVLMES-GYTVHLTDTAEK   83 (233)
T ss_dssp             CSSCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred             ccCCceEEEEc-ccHHHHHHHHHHHHh-ccceeeEeeccc
Confidence            45678999999 899999999988885 999999987543

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=90.83  E-value=0.28  Score=39.87  Aligned_cols=93  Identities=25%  Similarity=0.215  Sum_probs=58.3

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCcc----cccCCCcccE
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKEN----IEDLPEKFDV  217 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~----~~~~~~~~d~  217 (284)
                      ..+|++||=.++ |+ |..++.+|+  ++.+|+.++.+++.++.+++    .|.+  .++..+..+    +....+.||+
T Consensus       143 ~~~g~rVLDl~~-gt-G~~s~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~  218 (318)
T d1wxxa2         143 RFRGERALDVFS-YA-GGFALHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDL  218 (318)
T ss_dssp             GCCEEEEEEETC-TT-THHHHHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred             HhCCCeeeccCC-CC-cHHHHHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCE
Confidence            347899988873 32 444555664  37799999999998888753    3432  223222211    2223568998


Q ss_pred             EEeC---CCC---------------cHHHHHhhccCCEEEEEcCC
Q 023273          218 VFDA---VGQ---------------CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       218 vid~---~g~---------------~~~~~~~l~~~G~~v~~g~~  244 (284)
                      |+--   .+.               ...++++|+|+|.++.+...
T Consensus       219 Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         219 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             EEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            8742   221               13678889999999877644

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=90.80  E-value=1.1  Score=32.34  Aligned_cols=94  Identities=22%  Similarity=0.171  Sum_probs=60.3

Q ss_pred             cccchHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc
Q 023273          131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (284)
Q Consensus       131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (284)
                      .+||........++.-+ .-.|++++|+|.+..+|.-.+.++... +++|+++.........                  
T Consensus        16 ~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~-gatVt~~h~~t~~l~~------------------   76 (166)
T d1b0aa1          16 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-GCTTTVTHRFTKNLRH------------------   76 (166)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-TCEEEEECSSCSCHHH------------------
T ss_pred             CCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHh-hccccccccccchhHH------------------
Confidence            44555444444454333 357999999999999999998888884 9998877654432221                  


Q ss_pred             cCCCcccEEEeCCCCcHH-HHHhhccCCEEEEEcCC
Q 023273          210 DLPEKFDVVFDAVGQCDK-ALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       210 ~~~~~~d~vid~~g~~~~-~~~~l~~~G~~v~~g~~  244 (284)
                       ..+..|+++.++|.++. --+.++++..++.+|..
T Consensus        77 -~~~~ADivI~a~G~p~~i~~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          77 -HVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             -HHHHCSEEEECSCCTTCBCTTTSCTTCEEEECCCE
T ss_pred             -HHhhhhHhhhhccCcccccccccCCCcEEEecCce
Confidence             12346777887775321 12456677777776653

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=90.79  E-value=0.18  Score=41.46  Aligned_cols=34  Identities=18%  Similarity=0.224  Sum_probs=29.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      +.|||+||+|-+|...+..+... |.+|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~-g~~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEK-GYEVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC-cCEEEEEECCC
Confidence            57899999999999999988885 99999999843

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=90.74  E-value=0.11  Score=41.14  Aligned_cols=36  Identities=19%  Similarity=0.373  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      .++|||+||+|-+|...+..+... |.+|++++++..
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~-G~~V~~l~R~~~   38 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDL-GHPTFLLVREST   38 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEECCCc
Confidence            468999999999999999998884 999999998544

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.65  E-value=0.078  Score=40.20  Aligned_cols=67  Identities=16%  Similarity=0.126  Sum_probs=39.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCC--eEEEEeCChhhHHHHHHcCCcEEeeCCC-cccccCCCcccEEEeCCCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLGADLAIDYTK-ENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~--~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~d~vid~~g~  224 (284)
                      ++|||+||+|-+|...++.+... +.  +|++..+++...     .........+. +........+|.++.|.|.
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~-~~~~~v~~~~r~~~~~-----~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~   72 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSE-PTLAKVIAPARKALAE-----HPRLDNPVGPLAELLPQLDGSIDTAFCCLGT   72 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHC-TTCCEEECCBSSCCCC-----CTTEECCBSCHHHHGGGCCSCCSEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhC-CCeEEEEEEeCCchhh-----cccccccccchhhhhhccccchheeeeeeee
Confidence            68999999999999999988774 64  555555543210     00000000010 1122335678999999873

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=90.63  E-value=0.12  Score=37.11  Aligned_cols=82  Identities=21%  Similarity=0.192  Sum_probs=48.2

Q ss_pred             EEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC--cHHHHHhh
Q 023273          155 LVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CDKALKAV  232 (284)
Q Consensus       155 lI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~l  232 (284)
                      -++| +|.+|.+.++..+. .+....+..++.++.+.+.+.+.....+     ..+..+..|+||-|+..  ....+..|
T Consensus         3 gfIG-~G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~~~~~~-----~~~~~~~~DiVil~v~d~~i~~v~~~l   75 (153)
T d2i76a2           3 NFVG-TGTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYGGKAAT-----LEKHPELNGVVFVIVPDRYIKTVANHL   75 (153)
T ss_dssp             EEES-CCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCS-----SCCCCC---CEEECSCTTTHHHHHTTT
T ss_pred             EEEe-CcHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhcccccccc-----hhhhhccCcEEEEeccchhhhHHHhhh
Confidence            3678 89999998876655 2333457889999988887665432221     22334667888888764  45666666


Q ss_pred             ccCCEE-EEEcC
Q 023273          233 KEGGRV-VSIIG  243 (284)
Q Consensus       233 ~~~G~~-v~~g~  243 (284)
                      +..+++ +.++.
T Consensus        76 ~~~~~ivi~~s~   87 (153)
T d2i76a2          76 NLGDAVLVHCSG   87 (153)
T ss_dssp             CCSSCCEEECCS
T ss_pred             cccceeeeeccc
Confidence            644444 44543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.51  E-value=0.75  Score=32.52  Aligned_cols=69  Identities=22%  Similarity=0.265  Sum_probs=41.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCC--eEEEEeCChhhHHHHHHcCC-cEEe----eCCCcccccCCCcccEEEeCCC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLGA-DLAI----DYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~--~vi~~~~~~~~~~~~~~~g~-~~~~----~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      +|.|+||+|.+|..++.++... +.  +++.++.++.+ ..+.++.. ....    .....+..+..++.|+++-+.|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~-~~~~elvLiDi~~~~-~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag   77 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNS-PLVSRLTLYDIAHTP-GVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAG   77 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTC-TTCSEEEEEESSSHH-HHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCS
T ss_pred             eEEEECCCChHHHHHHHHHHhC-CccceEEEEeccccc-hhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCC
Confidence            6899998899999988887763 43  46666765544 33333321 1000    1112222233478999999887

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.49  E-value=0.16  Score=40.85  Aligned_cols=44  Identities=27%  Similarity=0.265  Sum_probs=34.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh--hhHHHHHHcC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST--AKLDLLRSLG  196 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~--~~~~~~~~~g  196 (284)
                      ++|||+||+|-+|...+..+... |.+|+++++..  .+...++.+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~l~~~~   46 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEK-GYRVHGLVARRSSDTRWRLRELG   46 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC-cCEEEEEECCCCcccHHHHHHhc
Confidence            48999999999999999988874 99999998743  2344455544

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.46  E-value=0.63  Score=32.24  Aligned_cols=71  Identities=15%  Similarity=0.108  Sum_probs=43.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC--cHHHHH
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CDKALK  230 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~  230 (284)
                      +|.|+|++|.+|.+..+++.. .+..++.....                  +   ..+....+|++||++..  ....++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~-~~~~l~~~id~------------------~---~~~~~~~~DVvIDFS~p~~~~~~l~   59 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSE-KGHELVLKVDV------------------N---GVEELDSPDVVIDFSSPEALPKTVD   59 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHH-TTCEEEEEEET------------------T---EEEECSCCSEEEECSCGGGHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHhc-CCCeEEEEECC------------------C---cHHHhccCCEEEEecCHHHHHHHHH
Confidence            689999999999999998887 47766643211                  0   01112458999998863  333444


Q ss_pred             hhccCCEEEEEcCCC
Q 023273          231 AVKEGGRVVSIIGSV  245 (284)
Q Consensus       231 ~l~~~G~~v~~g~~~  245 (284)
                      .....+.=+.+|-.+
T Consensus        60 ~~~~~~~p~ViGTTG   74 (128)
T d1vm6a3          60 LCKKYRAGLVLGTTA   74 (128)
T ss_dssp             HHHHHTCEEEECCCS
T ss_pred             HHHhcCCCEEEEcCC
Confidence            333444444455443

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=90.37  E-value=0.088  Score=38.53  Aligned_cols=94  Identities=19%  Similarity=0.188  Sum_probs=51.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc---EEee-CCCcccccCCCcccEEEeCCCC--c
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD---LAID-YTKENIEDLPEKFDVVFDAVGQ--C  225 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~---~~~~-~~~~~~~~~~~~~d~vid~~g~--~  225 (284)
                      -+|.|.|++|.+|.+.++.+....++.++.....+.....-+..+..   ...+ .-..+.......+|++||++..  .
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs~p~~~   84 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGT   84 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccceEEEeccHHHH
Confidence            47899999999999999998875455655444322211110111100   0000 0011223345679999999763  3


Q ss_pred             HHHHHhhccCCEEEEEcCCC
Q 023273          226 DKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       226 ~~~~~~l~~~G~~v~~g~~~  245 (284)
                      ...++.....|.=+.+|-.+
T Consensus        85 ~~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          85 LNHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             HHHHHHHHHTTCEEEECCCC
T ss_pred             HHHHHHHHhccceeEEecCC
Confidence            44555555556666676544

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=90.34  E-value=0.39  Score=34.65  Aligned_cols=71  Identities=23%  Similarity=0.325  Sum_probs=43.5

Q ss_pred             CEEEEEcCCchHHH-HHHHHHHHhcCCeEEEEe-CChh--hHHHHHHcCCcEEeeCCCcccccC--CCcccEEEeCCCC
Q 023273          152 KSILVLGGAGGVGT-MVIQLAKHVFGASKVAAT-SSTA--KLDLLRSLGADLAIDYTKENIEDL--PEKFDVVFDAVGQ  224 (284)
Q Consensus       152 ~~vlI~ga~g~~G~-~a~~~a~~~~g~~vi~~~-~~~~--~~~~~~~~g~~~~~~~~~~~~~~~--~~~~d~vid~~g~  224 (284)
                      -++.|+| +|.+|. ..+++.+......++.+. ++++  +..++++++....... .+.+.+.  ..++|+||.++..
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~~-~d~l~~~~~~~~iDiVf~ATpa   81 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAG-VEGLIKLPEFADIDFVFDATSA   81 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSH-HHHHHHSGGGGGEEEEEECSCH
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccccc-eeeeeecccccccCEEEEcCCc
Confidence            4789999 899987 456777664455666664 3433  3466778875433221 1111111  2479999999874

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=90.06  E-value=0.39  Score=35.27  Aligned_cols=94  Identities=18%  Similarity=0.170  Sum_probs=53.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcC--CeEEEEeC--ChhhHHHHHHc----CC--cEE---------eeCC---------
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFG--ASKVAATS--STAKLDLLRSL----GA--DLA---------IDYT---------  204 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~--~~~~~~~~~~~----g~--~~~---------~~~~---------  204 (284)
                      +|.|.| =|-+|+++.+.+.....  ..++.+-.  +.+....+-++    |.  ..+         +|..         
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~ivaINd~~~~~~~ayLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~~   80 (172)
T d1rm4a1           2 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN   80 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCSC
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEEcCCCCHHHHHHHHhcCcccccccceeEecCCcceEECCEEEEEecCCC
Confidence            578888 99999999987765322  34554432  33333433232    10  011         1100         


Q ss_pred             CcccccCCCcccEEEeCCCCc---HHHHHhhccCCEEEEEcCCCCC
Q 023273          205 KENIEDLPEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTP  247 (284)
Q Consensus       205 ~~~~~~~~~~~d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~~  247 (284)
                      ...++....++|+|+||+|.+   +.+...|..+-+=|+++.|...
T Consensus        81 p~~i~W~~~gvDiViEcTG~f~~~~~~~~hl~~GakkViiSAP~k~  126 (172)
T d1rm4a1          81 PVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKG  126 (172)
T ss_dssp             GGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSCEEESSCCBS
T ss_pred             hHHCChhhcCCCEEEecCceEccHHHHHHHHhcCCceEEeeccccc
Confidence            000111123799999999963   6677788888766777776543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=89.94  E-value=0.17  Score=37.92  Aligned_cols=41  Identities=15%  Similarity=0.215  Sum_probs=34.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL  195 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~  195 (284)
                      +|.|+| +|..|.+.+..+.. .|.+|.+..++++..+.+++.
T Consensus         9 KI~ViG-aG~wGtAlA~~La~-~g~~V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           9 KAVVFG-SGAFGTALAMVLSK-KCREVCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHT-TEEEEEEECSCHHHHHHHHHH
T ss_pred             eEEEEC-CCHHHHHHHHHHHH-cCCeEEEEEecHHHHHHHhhc
Confidence            699999 89999998888877 378999999999988887643

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=89.93  E-value=0.22  Score=37.11  Aligned_cols=39  Identities=21%  Similarity=0.194  Sum_probs=31.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~  192 (284)
                      ++|.|+| +|.+|...+.++.. .|++|++.+.+++.++.+
T Consensus         5 ~~vaViG-aG~mG~~iA~~~a~-~G~~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLG-AGIMGGGIAYQSAS-KGTPILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEEC-CHHHHHHHHHHHHH-TTCCEEEECSSHHHHHHH
T ss_pred             CEEEEEC-cCHHHHHHHHHHHh-CCCeEEEEECCHHHHhhh
Confidence            4689999 79999987766666 499999999998876554

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.57  E-value=0.24  Score=39.46  Aligned_cols=36  Identities=11%  Similarity=0.247  Sum_probs=30.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      +...+|+|+| +|..|+.|+..+... |.+|.+++.++
T Consensus         3 ~~~~kViVIG-aG~aGL~aA~~L~~~-G~~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIG-SGVSGLAAARQLQSF-GMDVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEEC-CBHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence            4566799999 899999999988885 99999998754

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=89.47  E-value=0.36  Score=33.11  Aligned_cols=38  Identities=16%  Similarity=0.332  Sum_probs=32.4

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      +.++++++|+| +|.+|.=++..++.. |.+|.++.+++.
T Consensus        27 ~~~~~~vvIIG-gG~iG~E~A~~l~~~-g~~Vtli~~~~~   64 (121)
T d1d7ya2          27 LRPQSRLLIVG-GGVIGLELAATARTA-GVHVSLVETQPR   64 (121)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred             hhcCCeEEEEC-cchhHHHHHHHhhcc-cceEEEEeeccc
Confidence            46779999999 899999988888885 999999987653

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=89.22  E-value=0.39  Score=32.67  Aligned_cols=38  Identities=18%  Similarity=0.330  Sum_probs=31.9

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      .++..++|+|+| +|.+|.=++..++.+ |.+|.++.+.+
T Consensus        18 ~l~~p~~v~IiG-gG~iG~E~A~~l~~~-g~~Vtlv~~~~   55 (117)
T d1onfa2          18 NIKESKKIGIVG-SGYIAVELINVIKRL-GIDSYIFARGN   55 (117)
T ss_dssp             TCCCCSEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSSS
T ss_pred             ccCCCCEEEEEC-CchHHHHHHHHHHhc-cccceeeehhc
Confidence            445568999999 899999999998885 99999998754

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=89.05  E-value=0.29  Score=37.49  Aligned_cols=35  Identities=23%  Similarity=0.303  Sum_probs=29.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      +...+|+|+| +|..|++++..+... |.+|.++++.
T Consensus         4 ~~~~kVvVIG-aGiaGl~~A~~L~~~-G~~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLG-SGVIGLSSALILARK-GYSVHILARD   38 (268)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred             CCCCcEEEEC-ccHHHHHHHHHHHHC-CCCEEEEeCC
Confidence            3456899999 899999999888884 9999999863

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.98  E-value=0.22  Score=41.35  Aligned_cols=32  Identities=19%  Similarity=0.273  Sum_probs=28.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEe
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT  183 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~  183 (284)
                      |++|||+||+|-+|...+..+... |.+|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~-g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKK-NYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEe
Confidence            689999999999999998888884 99999987

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=88.93  E-value=0.33  Score=38.54  Aligned_cols=93  Identities=19%  Similarity=0.233  Sum_probs=58.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC----------cEEeeCCCc-ccccCCCcccE
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA----------DLAIDYTKE-NIEDLPEKFDV  217 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~----------~~~~~~~~~-~~~~~~~~~d~  217 (284)
                      .+.++|||+|+  +-|..+..+++.....++.+++.+++=.+.++++-.          ..++..+.- .+.+..+.+|+
T Consensus        74 ~~p~~vLiiGg--G~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~~~~l~~~~~~yDv  151 (274)
T d1iy9a_          74 PNPEHVLVVGG--GDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDV  151 (274)
T ss_dssp             SSCCEEEEESC--TTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEE
T ss_pred             CCcceEEecCC--CCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEechHHHHHhhcCCCCCE
Confidence            45579999984  445566677776324688999999998888766421          112222111 12223567999


Q ss_pred             EE-eCCC---C---------cHHHHHhhccCCEEEEEcC
Q 023273          218 VF-DAVG---Q---------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       218 vi-d~~g---~---------~~~~~~~l~~~G~~v~~g~  243 (284)
                      |+ |...   .         ++.+.++|+++|.++.=.+
T Consensus       152 Ii~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~~  190 (274)
T d1iy9a_         152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD  190 (274)
T ss_dssp             EEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEecC
Confidence            86 4332   1         2678889999999986543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.90  E-value=0.55  Score=38.07  Aligned_cols=32  Identities=34%  Similarity=0.431  Sum_probs=27.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~  184 (284)
                      +.|||+||+|-+|...+..+... |.+|+++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~-g~~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIEN-GYDCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC-cCeEEEEEC
Confidence            57899999999999988888884 899999875

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=88.71  E-value=0.25  Score=40.11  Aligned_cols=91  Identities=21%  Similarity=0.303  Sum_probs=56.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-----------cEEeeCCCc-ccccCCCccc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-----------DLAIDYTKE-NIEDLPEKFD  216 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-----------~~~~~~~~~-~~~~~~~~~d  216 (284)
                      ...++|||+|+  +.|..+.++++.....++.+++.+++-.+.+++.-.           .+++..+.. .+.+..+.+|
T Consensus        76 ~~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yD  153 (312)
T d1uira_          76 PEPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYD  153 (312)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEE
T ss_pred             CCcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchHHHHhhhcCCccc
Confidence            45678999994  445566666665335689999999998887765310           112211111 1223356799


Q ss_pred             EEE-eC---CC--C----------cHHHHHhhccCCEEEEE
Q 023273          217 VVF-DA---VG--Q----------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       217 ~vi-d~---~g--~----------~~~~~~~l~~~G~~v~~  241 (284)
                      +|| |.   .+  .          ++.+.++|+++|.++.=
T Consensus       154 vIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~  194 (312)
T d1uira_         154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (312)
T ss_dssp             EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence            986 43   22  1          15688999999998863

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=88.69  E-value=0.26  Score=38.48  Aligned_cols=34  Identities=18%  Similarity=0.289  Sum_probs=29.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      ++|||+||+|-+|...+..++.. |.+|+.+++++
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~-g~~Vi~~~r~~   35 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGK-NVEVIPTDVQD   35 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTS-SEEEEEECTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC-CCEEEEeechh
Confidence            47999999999999999999884 99999988753

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.59  E-value=2.2  Score=34.31  Aligned_cols=94  Identities=14%  Similarity=0.123  Sum_probs=61.6

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHH----HHcCCcEEeeCCCcccccCCCcccEEEe
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL----RSLGADLAIDYTKENIEDLPEKFDVVFD  220 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~d~vid  220 (284)
                      ...+...++.|+| +|..+.+-++.....+.. ++.+..+++++.+.+    +..+.....+.     .+...+.|+|+-
T Consensus       120 la~~~~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~-----~~a~~~aDiV~t  193 (320)
T d1omoa_         120 LARKNSSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQP-----AEEASRCDVLVT  193 (320)
T ss_dssp             HSCTTCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECC-----HHHHTSSSEEEE
T ss_pred             hccCCccEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccch-----hhhhccccEEEE
Confidence            3345567899999 899999888777765554 788888888876554    33333322221     112357899999


Q ss_pred             CCCC--cHHHHHhhccCCEEEEEcCCC
Q 023273          221 AVGQ--CDKALKAVKEGGRVVSIIGSV  245 (284)
Q Consensus       221 ~~g~--~~~~~~~l~~~G~~v~~g~~~  245 (284)
                      |+.+  +---.+.++++-.+..+|...
T Consensus       194 aT~s~~P~~~~~~l~~G~hv~~iGs~~  220 (320)
T d1omoa_         194 TTPSRKPVVKAEWVEEGTHINAIGADG  220 (320)
T ss_dssp             CCCCSSCCBCGGGCCTTCEEEECSCCS
T ss_pred             eccCcccccchhhcCCCCeEeecCCcc
Confidence            8875  211224688888888887643

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=88.53  E-value=0.52  Score=34.24  Aligned_cols=82  Identities=16%  Similarity=0.193  Sum_probs=53.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---cHH
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CDK  227 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---~~~  227 (284)
                      -+|.|+| +|.+|...+...+...+..++.+.. ++++..      ...+..+  .+.......+|+|+.|+++   .+.
T Consensus         4 irvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~------~~~~~~~--~~~~~~~~~~D~Vvi~tp~~~h~~~   74 (170)
T d1f06a1           4 IRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT------KTPVFDV--ADVDKHADDVDVLFLCMGSATDIPE   74 (170)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS------SSCEEEG--GGGGGTTTTCSEEEECSCTTTHHHH
T ss_pred             ceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccccc------ccccccc--hhhhhhccccceEEEeCCCcccHHH
Confidence            4689999 8999998888877654666665543 433211      1112221  1223334679999999875   478


Q ss_pred             HHHhhccCCEEEEEc
Q 023273          228 ALKAVKEGGRVVSII  242 (284)
Q Consensus       228 ~~~~l~~~G~~v~~g  242 (284)
                      +.++|..|-.++.+.
T Consensus        75 a~~aL~aG~~vv~~~   89 (170)
T d1f06a1          75 QAPKFAQFACTVDTY   89 (170)
T ss_dssp             HHHHHTTTSEEECCC
T ss_pred             HHHHHHCCCcEEEec
Confidence            888999988877543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=88.41  E-value=0.29  Score=39.62  Aligned_cols=34  Identities=24%  Similarity=0.306  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      .++|+|+| +|..|+.++..+... |.+|.+++.++
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~-G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEK-GHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEEESSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhC-CCCEEEEECCC
Confidence            57899999 899999999998884 89999998764

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=88.33  E-value=0.91  Score=30.92  Aligned_cols=36  Identities=19%  Similarity=0.315  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      ..++++|+| +|-+|+=++++.+.+ |.+|.++.+++.
T Consensus        24 ~p~~~viiG-~G~iglE~A~~~~~~-G~~Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIG-AGYIGLEMGSVWGRI-GSEVTVVEFASE   59 (123)
T ss_dssp             CCSEEEESC-CSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred             cCCeEEEEc-cchHHHHHHHHHHhc-CCeEEEEEEccc
Confidence            457899999 899999999999996 999999987654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.17  E-value=0.73  Score=31.47  Aligned_cols=39  Identities=13%  Similarity=0.192  Sum_probs=32.2

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      ..-..+++|+|+| +|.+|+-++..+..+ |.+|.++.+.+
T Consensus        25 ~~~~~~k~vvViG-gG~iG~E~A~~l~~~-g~~Vtlie~~~   63 (123)
T d1nhpa2          25 TVDPEVNNVVVIG-SGYIGIEAAEAFAKA-GKKVTVIDILD   63 (123)
T ss_dssp             HTCTTCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred             hhccCCCEEEEEC-ChHHHHHHHHHhhcc-ceEEEEEEecC
Confidence            3345678999999 899999999998885 99999997754

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=88.11  E-value=2.1  Score=30.08  Aligned_cols=70  Identities=23%  Similarity=0.286  Sum_probs=40.2

Q ss_pred             EEEEEcCCchHHHHHHHHHH-Hhc-CCeEEEEeCChhhHHHHHHcC---C---cEEeeCCCcccccCCCcccEEEeCCCC
Q 023273          153 SILVLGGAGGVGTMVIQLAK-HVF-GASKVAATSSTAKLDLLRSLG---A---DLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~-~~~-g~~vi~~~~~~~~~~~~~~~g---~---~~~~~~~~~~~~~~~~~~d~vid~~g~  224 (284)
                      +|.|+|++|.+|..++.+.. ..+ ...+...+..+.....+.++.   .   ...+. ...++.. ..+.|+|+-+.|.
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~-~~~~~~~-~~~aDvvvitaG~   79 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFS-GEDATPA-LEGADVVLISAGV   79 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEEC-SSCCHHH-HTTCSEEEECCSC
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEE-cCCCccc-cCCCCEEEECCCc
Confidence            68899988999987766543 321 356777776544334443332   1   11111 1222222 3589999999883

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.10  E-value=0.25  Score=38.99  Aligned_cols=33  Identities=27%  Similarity=0.450  Sum_probs=28.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      .|+|+| +|+.|++++..++.. |.+|.++++.++
T Consensus         4 ~V~IvG-aGp~Gl~~A~~L~~~-G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIG-AGPSGLLLGQLLHKA-GIDNVILERQTP   36 (292)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHH-TCCEEEECSSCH
T ss_pred             CEEEEC-cCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence            589999 899999998888885 999999998653

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.74  E-value=0.32  Score=39.04  Aligned_cols=92  Identities=22%  Similarity=0.321  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC---------c-EEeeCCC-cccccCCCcccEE
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA---------D-LAIDYTK-ENIEDLPEKFDVV  218 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~---------~-~~~~~~~-~~~~~~~~~~d~v  218 (284)
                      ..++|||+|+  +-|..+-.+++.....+|.+++.+++-.+.++++-.         . +++..+. ..+....+.+|+|
T Consensus        89 ~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDvI  166 (295)
T d1inla_          89 NPKKVLIIGG--GDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI  166 (295)
T ss_dssp             SCCEEEEEEC--TTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred             CCceEEEecC--CchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHHHHHhcCCCCCCEE
Confidence            4578999984  444556666666324679999999998888776421         0 1221111 1122335679987


Q ss_pred             E-eCC----CC---------cHHHHHhhccCCEEEEEcC
Q 023273          219 F-DAV----GQ---------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       219 i-d~~----g~---------~~~~~~~l~~~G~~v~~g~  243 (284)
                      | |..    +.         ++.+.++|+++|.++.-.+
T Consensus       167 i~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~~  205 (295)
T d1inla_         167 IIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE  205 (295)
T ss_dssp             EEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEecC
Confidence            6 432    11         2688899999999987543

>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glucose-inhibited division protein B (GidB)
domain: Glucose-inhibited division protein B (GidB)
species: Escherichia coli [TaxId: 562]

Probab=87.69  E-value=1.7  Score=32.58  Aligned_cols=95  Identities=20%  Similarity=0.214  Sum_probs=62.6

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc--EEeeCCCcccccCCCcccEEEe
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD--LAIDYTKENIEDLPEKFDVVFD  220 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~--~~~~~~~~~~~~~~~~~d~vid  220 (284)
                      ..-++++++-+|+.+  |+=.+-+|......+++.++++.+|..+++    +++..  .+++.+.+.+.. ...+|+|..
T Consensus        62 ~~~~~~~ilDiGsGa--G~PGi~laI~~p~~~~~Lves~~KK~~FL~~~~~~L~L~nv~v~~~R~E~~~~-~~~fD~V~s  138 (207)
T d1jsxa_          62 PYLQGERFIDVGTGP--GLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS-EPPFDGVIS  138 (207)
T ss_dssp             GGCCSSEEEEETCTT--TTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC-CSCEEEEEC
T ss_pred             hhhcCCceeeeeccC--CceeeehhhhcccceEEEEecchHHHHHHHHHHHHcCCcceeeeccchhhhcc-ccccceehh
Confidence            334567899888544  444444554434689999999999998885    46643  455554443322 346898886


Q ss_pred             -CCCCc----HHHHHhhccCCEEEEEcCC
Q 023273          221 -AVGQC----DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       221 -~~g~~----~~~~~~l~~~G~~v~~g~~  244 (284)
                       +++..    +.+..+++++|+++.+-+.
T Consensus       139 RA~~~~~~ll~~~~~~l~~~g~~~~~KG~  167 (207)
T d1jsxa_         139 RAFASLNDMVSWCHHLPGEQGRFYALKGQ  167 (207)
T ss_dssp             SCSSSHHHHHHHHTTSEEEEEEEEEEESS
T ss_pred             hhhcCHHHHHHHHHHhcCCCcEEEEECCC
Confidence             35553    5566678889999988554

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=87.66  E-value=2.4  Score=29.70  Aligned_cols=90  Identities=10%  Similarity=0.051  Sum_probs=56.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHH-HHH---HcCCcEEeeC-CC-cccccC-CCcccEEEeCCC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD-LLR---SLGADLAIDY-TK-ENIEDL-PEKFDVVFDAVG  223 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~-~~~---~~g~~~~~~~-~~-~~~~~~-~~~~d~vid~~g  223 (284)
                      .++++|.| .|.+|...++..... +..+++++.++++.. .+.   ..+...+.-. .+ +.+.+. -+.+|.++-+++
T Consensus         3 knHiII~G-~g~~g~~l~~~L~~~-~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~   80 (153)
T d1id1a_           3 KDHFIVCG-HSILAINTILQLNQR-GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence            46899999 799999999998884 999999998876532 222   2344333211 11 112222 357899998888


Q ss_pred             Cc------HHHHHhhccCCEEEEEc
Q 023273          224 QC------DKALKAVKEGGRVVSII  242 (284)
Q Consensus       224 ~~------~~~~~~l~~~G~~v~~g  242 (284)
                      +.      -...+.+.+.-+++...
T Consensus        81 ~d~~n~~~~~~~r~~~~~~~iia~~  105 (153)
T d1id1a_          81 NDADNAFVVLSAKDMSSDVKTVLAV  105 (153)
T ss_dssp             CHHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred             cHHHHHHHHHHHHHhCCCCceEEEE
Confidence            52      33445566666666543

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=87.64  E-value=0.96  Score=36.55  Aligned_cols=101  Identities=17%  Similarity=0.273  Sum_probs=65.0

Q ss_pred             HHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcCCcEEeeCCCcc-cc----
Q 023273          139 AYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAIDYTKEN-IE----  209 (284)
Q Consensus       139 a~~al~~-~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~~~~~~-~~----  209 (284)
                      |++.+.. ..-.+..+|+... +|..|.+++..++.. |.+.+++..   +++|.+.++.+|++.+....... ..    
T Consensus        62 a~~~i~~~~~~~~~~~vv~as-sGN~g~a~A~~a~~~-g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~  139 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVITAS-AGNHAQGVAFSSARL-GVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAI  139 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEEEE-CSSSHHHHHHHHHHT-TCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeeecc-cchhHHHHHHhhccc-cccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhh
Confidence            4445533 2223444555544 899999999999995 887777754   67788888999987543211100 00    


Q ss_pred             -----------c--------------------CCCcccEEEeCCCC------cHHHHHhhccCCEEEEE
Q 023273          210 -----------D--------------------LPEKFDVVFDAVGQ------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       210 -----------~--------------------~~~~~d~vid~~g~------~~~~~~~l~~~G~~v~~  241 (284)
                                 .                    ....+|.+|-++|+      ....++.+.+.-+++-+
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~v  208 (331)
T d1tdja1         140 ELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAV  208 (331)
T ss_dssp             HHHHHHCCEECCSSCCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             hhhhcCCCccccccCChHHhhhhhhHHHHHHHhcCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEe
Confidence                       0                    03368999998875      24566667788888877

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=87.56  E-value=0.26  Score=37.55  Aligned_cols=32  Identities=19%  Similarity=0.325  Sum_probs=26.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCCh
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSST  186 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~  186 (284)
                      .|+|+| +|..|+.|+..++.. |. +|.+++.++
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~-G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEA-GITDLLILEATD   34 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHT-TCCCEEEECSSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhC-CCCcEEEEECCC
Confidence            489999 899999998888874 86 699988764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.42  E-value=0.54  Score=32.69  Aligned_cols=39  Identities=18%  Similarity=0.259  Sum_probs=32.6

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      .+.++.+++|+| +|.+|+-++..++.+ |.+|.++.+.+.
T Consensus        31 ~~~~~k~v~VIG-gG~iG~E~A~~l~~~-g~~Vtvie~~~~   69 (133)
T d1q1ra2          31 QLIADNRLVVIG-GGYIGLEVAATAIKA-NMHVTLLDTAAR   69 (133)
T ss_dssp             TCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred             hhccCCEEEEEC-CchHHHHHHHHHHhh-Ccceeeeeeccc
Confidence            345678999999 899999999998885 999999987543

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=87.40  E-value=0.25  Score=38.55  Aligned_cols=32  Identities=28%  Similarity=0.368  Sum_probs=27.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      +|+|+| +|..|+.++..+... |.+|.+++.++
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~-G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVG-GGISGLAVAHHLRSR-GTDAVLLESSA   33 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHTT-TCCEEEECSSS
T ss_pred             eEEEEC-CCHHHHHHHHHHHhC-CCCEEEEecCC
Confidence            589999 799999999888885 99999998753

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=87.32  E-value=1.1  Score=32.51  Aligned_cols=43  Identities=14%  Similarity=0.101  Sum_probs=36.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG  196 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g  196 (284)
                      .+|-++| .|.+|...+.-+.. .|.+|++.++++++.+.+.+.+
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~-~G~~V~~~dr~~~~~~~l~~~~   44 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAE-KGFKVAVFNRTYSKSEEFMKAN   44 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHH-TTCCEEEECSSHHHHHHHHHHT
T ss_pred             CEEEEEe-ehHHHHHHHHHHHH-CCCeEEEEECCHHHHHHHHHcC
Confidence            4578889 99999998888777 4999999999999998886544

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=87.17  E-value=0.86  Score=32.49  Aligned_cols=129  Identities=20%  Similarity=0.177  Sum_probs=70.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCC---eEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGA---SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---  224 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~---~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---  224 (284)
                      |-+|.|+||+|-+|.-.++++..+ ..   .+..+. +.+.....-..........  ..........|+++-+.+.   
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H-~fp~~~l~~~~-s~~s~G~~~~~~~~~~~~~--~~~~~~~~~~d~~f~~~~~~~s   76 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEES-TLPIDKIRYLA-SARSAGKSLKFKDQDITIE--ETTETAFEGVDIALFSAGSSTS   76 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTC-CSCEEEEEEEE-CGGGTTCEEEETTEEEEEE--ECCTTTTTTCSEEEECSCHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcC-CCCceEEEEec-ccccccccccccCCccccc--ccchhhhhhhhhhhhccCccch
Confidence            458999999999999999998764 32   222232 3221110000000000000  0011123568899888874   


Q ss_pred             cHHHHHhhccCCEEEEEcCCC-CCCcee----------------EEEe--ccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273          225 CDKALKAVKEGGRVVSIIGSV-TPPASS----------------FVLT--SDGSILEKLNPYFESGKVKAIIDPKGLL  283 (284)
Q Consensus       225 ~~~~~~~l~~~G~~v~~g~~~-~~~~~~----------------~~~~--~~~~~~~~~~~~~~~g~i~~~i~~~~~~  283 (284)
                      .+...+.+.++-+++..+... ......                +...  .....+.-+..+.++|-|++...-+|.+
T Consensus        77 ~~~~~~~~~~~~~VIDlSsdfR~~~~~~~~~pe~n~~~~~~~~~iIAnPgC~tt~i~~l~PL~~~~lik~~~~~~~~~  154 (154)
T d2gz1a1          77 AKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNAAWNSVQIAETLHERGLVRPTAELKFEL  154 (154)
T ss_dssp             HHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGGGCCSEEECCCTHHHHHHHHHHHHHTTCCSCCSSCCSCC
T ss_pred             hhHHhhhccccceehhcChhhhccCCcccccchhhHHHhcCcCceEECCCCHHHHHHHHHHHHHhcCCCccceeeecC
Confidence            255556777788888876532 111111                1111  1223344467788999999988777754

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=87.09  E-value=0.31  Score=36.31  Aligned_cols=82  Identities=24%  Similarity=0.263  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC-C----
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q----  224 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g-~----  224 (284)
                      .+.+|.|+| .|.+|...+++++. ++++|+..++......     ..  ....  ..+.+.-...|++.-+.. .    
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~-fg~~v~~~d~~~~~~~-----~~--~~~~--~~l~ell~~sDii~i~~plt~~T~  111 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAES-LGMYVYFYDIENKLPL-----GN--ATQV--QHLSDLLNMSDVVSLHVPENPSTK  111 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHH-TTCEEEEECSSCCCCC-----TT--CEEC--SCHHHHHHHCSEEEECCCSSTTTT
T ss_pred             cceEEEEee-cccchhhhhhhccc-ccceEeeccccccchh-----hh--hhhh--hhHHHHHhhccceeecccCCcchh
Confidence            578999999 99999999999999 5999999987533111     00  0111  122333345788776654 1    


Q ss_pred             ---cHHHHHhhccCCEEEEEc
Q 023273          225 ---CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g  242 (284)
                         -...++.|+++..+|-++
T Consensus       112 ~li~~~~l~~mk~~a~lIN~a  132 (188)
T d1sc6a1         112 NMMGAKEISLMKPGSLLINAS  132 (188)
T ss_dssp             TCBCHHHHHHSCTTEEEEECS
T ss_pred             hhccHHHHhhCCCCCEEEEcC
Confidence               178888998888888765

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.00  E-value=0.38  Score=37.33  Aligned_cols=32  Identities=28%  Similarity=0.281  Sum_probs=26.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCCh
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSST  186 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~  186 (284)
                      .|+|+| +|..|++++..++.. |. +|.++++++
T Consensus         3 ~V~IvG-aG~aGl~~A~~L~~~-Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAG-AGIGGLSCALALHQA-GIGKVTLLESSS   35 (288)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESSS
T ss_pred             EEEEEC-cCHHHHHHHHHHHhC-CCCeEEEEeCCC
Confidence            689999 899999999998885 86 777888754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.76  E-value=0.4  Score=38.62  Aligned_cols=33  Identities=18%  Similarity=0.178  Sum_probs=29.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      +++||+||+|-+|...+..+... |.+|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~-g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGK-GYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHC-cCEEEEEECC
Confidence            57999999999999999999884 9999999974

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.69  E-value=0.23  Score=39.03  Aligned_cols=46  Identities=11%  Similarity=0.078  Sum_probs=33.0

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS  194 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~  194 (284)
                      .+...|.++|-+| +|+ |...+..+.. ...+|++++.++..++.+++
T Consensus        50 ~g~~~g~~vLDiG-cG~-g~~~~~~~~~-~~~~v~~~D~S~~~i~~~~~   95 (263)
T d2g72a1          50 TGEVSGRTLIDIG-SGP-TVYQLLSACS-HFEDITMTDFLEVNRQELGR   95 (263)
T ss_dssp             TSCSCCSEEEEET-CTT-CCGGGTTGGG-GCSEEEEECSCHHHHHHHHH
T ss_pred             CCCCCCcEEEEec-cCC-CHHHHHHhcc-cCCeEEEEeCCHHHHHHHHH
Confidence            4566789999999 555 4444444444 36689999999998888764

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.59  E-value=0.35  Score=36.46  Aligned_cols=31  Identities=19%  Similarity=0.280  Sum_probs=26.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      |+|+| +|..|+.++..+... |.+|.+++.++
T Consensus         8 viViG-aG~~Gl~~A~~La~~-G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVD-GKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHC-CCCEEEEcCCC
Confidence            78889 899999988888774 99999999864

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=86.48  E-value=4.3  Score=29.19  Aligned_cols=117  Identities=14%  Similarity=0.134  Sum_probs=69.1

Q ss_pred             CEEEEEcCCchHHHH-HHHHHHHhcC-CeEE-EEeCChhhHHHH-HHcCCcEEeeCCCcccccC--CCcccEEEeCCCC-
Q 023273          152 KSILVLGGAGGVGTM-VIQLAKHVFG-ASKV-AATSSTAKLDLL-RSLGADLAIDYTKENIEDL--PEKFDVVFDAVGQ-  224 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~-a~~~a~~~~g-~~vi-~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~--~~~~d~vid~~g~-  224 (284)
                      -++.|+| +|.+|.. .+...+...+ .+++ +.++++++.+.+ ++++...++++    +.+.  ...+|+|+-++.. 
T Consensus         4 irigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~----~~ell~~~~id~v~I~tp~~   78 (181)
T d1zh8a1           4 IRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDS----YEELLESGLVDAVDLTLPVE   78 (181)
T ss_dssp             EEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESC----HHHHHHSSCCSEEEECCCGG
T ss_pred             cEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceeee----eeccccccccceeecccccc
Confidence            3688999 8999864 3555554323 3555 445677766554 45665444432    2222  3579999988774 


Q ss_pred             --cHHHHHhhccCCEEEEEcCCCCC--------------CceeEEE----ec--cHHHHHHHHHHHHCCCee
Q 023273          225 --CDKALKAVKEGGRVVSIIGSVTP--------------PASSFVL----TS--DGSILEKLNPYFESGKVK  274 (284)
Q Consensus       225 --~~~~~~~l~~~G~~v~~g~~~~~--------------~~~~~~~----~~--~~~~~~~~~~~~~~g~i~  274 (284)
                        .+.+..++.. |+=|++.-|-..              ....+..    +.  ....+.++.+++++|++.
T Consensus        79 ~h~~~~~~al~~-gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~ig  149 (181)
T d1zh8a1          79 LNLPFIEKALRK-GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKPN  149 (181)
T ss_dssp             GHHHHHHHHHHT-TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCCC
T ss_pred             cccccccccccc-chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCCc
Confidence              3556666665 566777665311              1111111    11  236788899999998764

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=86.47  E-value=0.94  Score=36.28  Aligned_cols=102  Identities=17%  Similarity=0.200  Sum_probs=65.6

Q ss_pred             HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcCCcEEeeCC-Cccccc----
Q 023273          139 AYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAIDYT-KENIED----  210 (284)
Q Consensus       139 a~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~~~-~~~~~~----  210 (284)
                      |++++..+........++.+++|..|.+++..|+.+ |.+.+++..   ++++.+.++.+|++.+.... .+....    
T Consensus        56 a~~~~~~~~~~~~~~~vv~~ssGN~g~a~A~~a~~~-g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~a~~  134 (318)
T d1v71a1          56 ALNALSQLNEAQRKAGVLTFSSGNHAQAIALSAKIL-GIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRYKDDREKMAKE  134 (318)
T ss_dssp             HHHHHTTCCHHHHHHCEEECCSSHHHHHHHHHHHHT-TCCEEEEEETTCCHHHHHHHHHTTCEEEEECTTTTCHHHHHHH
T ss_pred             HHHHHHHhhhccccceeeeeccchhhHHHHHhhccc-ccceeecccccccHHHHHHHHHcCCcEEeccCCchHHHHHHHH
Confidence            444554332222233466677999999999999995 877666653   67788888999987543211 111000    


Q ss_pred             ---------C----------------------CCcccEEEeCCCC------cHHHHHhhccCCEEEEE
Q 023273          211 ---------L----------------------PEKFDVVFDAVGQ------CDKALKAVKEGGRVVSI  241 (284)
Q Consensus       211 ---------~----------------------~~~~d~vid~~g~------~~~~~~~l~~~G~~v~~  241 (284)
                               .                      .+.+|.+|-++|+      ....++.+.+..+++-+
T Consensus       135 ~a~~~g~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~d~vvv~~G~GG~~~Gi~~~~~~~~~~~~ii~v  202 (318)
T d1v71a1         135 ISEREGLTIIPPYDHPHVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGV  202 (318)
T ss_dssp             HHHHHTCBCCCSSSSHHHHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHHhcCCEecCCccccccccccchHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCCceeecc
Confidence                     0                      1257999988874      25677778888888876

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=86.41  E-value=0.36  Score=37.43  Aligned_cols=34  Identities=18%  Similarity=0.304  Sum_probs=28.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~  188 (284)
                      -|+|+| +|+.|++++..+... |.+|.+++..++-
T Consensus         6 DViIIG-aG~aGl~aA~~la~~-G~~V~vlEk~~~~   39 (253)
T d2gqfa1           6 ENIIIG-AGAAGLFCAAQLAKL-GKSVTVFDNGKKI   39 (253)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred             cEEEEC-cCHHHHHHHHHHHHC-CCcEEEEecCCCC
Confidence            378889 899999988888874 9999999987653

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=86.40  E-value=3  Score=31.34  Aligned_cols=88  Identities=18%  Similarity=0.277  Sum_probs=53.4

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHhcCCeEE-EEeCChhhHHHH-HHcCCc--EEeeCCCcccccC--CCcccEEEeCCCC-
Q 023273          153 SILVLGGAGGVGTM-VIQLAKHVFGASKV-AATSSTAKLDLL-RSLGAD--LAIDYTKENIEDL--PEKFDVVFDAVGQ-  224 (284)
Q Consensus       153 ~vlI~ga~g~~G~~-a~~~a~~~~g~~vi-~~~~~~~~~~~~-~~~g~~--~~~~~~~~~~~~~--~~~~d~vid~~g~-  224 (284)
                      +|.|+| +|.+|.. .+...+...+.+++ ++++++++.+.+ ++++..  .+..++  ++.+.  ...+|+|+-++.. 
T Consensus        35 riaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~--d~~ell~~~~iD~V~I~tp~~  111 (221)
T d1h6da1          35 GYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYS--NFDKIAKDPKIDAVYIILPNS  111 (221)
T ss_dssp             EEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSS--SGGGGGGCTTCCEEEECSCGG
T ss_pred             EEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccC--chhhhcccccceeeeeccchh
Confidence            788999 8999863 34443443467777 446677776555 556532  122222  12222  3579999988874 


Q ss_pred             --cHHHHHhhccCCEEEEEcCC
Q 023273          225 --CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       225 --~~~~~~~l~~~G~~v~~g~~  244 (284)
                        .+.+.++|.. |+=+++.-|
T Consensus       112 ~H~~~~~~al~~-gk~v~~EKP  132 (221)
T d1h6da1         112 LHAEFAIRAFKA-GKHVMCEKP  132 (221)
T ss_dssp             GHHHHHHHHHHT-TCEEEECSS
T ss_pred             hhhhHHHHhhhc-chhhhcCCC
Confidence              3677777765 466667655

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.39  E-value=0.58  Score=35.03  Aligned_cols=41  Identities=24%  Similarity=0.389  Sum_probs=34.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS  194 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~  194 (284)
                      ++|.|+| .|-+|+..+...... |.+|++++.++++.+.+++
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~-g~~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSAR-GHEVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHT
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhC-CCcEEEEeCCHHHHHHhcc
Confidence            3688999 899999877777664 9999999999999888765

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.38  E-value=0.98  Score=37.40  Aligned_cols=84  Identities=15%  Similarity=0.167  Sum_probs=56.3

Q ss_pred             CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CCcEEeeC--------C------Ccc----cccCCCcccE
Q 023273          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GADLAIDY--------T------KEN----IEDLPEKFDV  217 (284)
Q Consensus       160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~~~~~~~--------~------~~~----~~~~~~~~d~  217 (284)
                      -+.+|...+++|+..+..+|++.+.+++-.+.+++.    +.......        .      ..+    .....+.||+
T Consensus        53 ~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~~~~~~~fDv  132 (375)
T d2dula1          53 LSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHRYFHF  132 (375)
T ss_dssp             SCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHSTTCEEE
T ss_pred             CCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhhhhhHhhcCcCCc
Confidence            677788999999986445888999999988877531    21111000        0      000    1112456997


Q ss_pred             E-EeCCCCc----HHHHHhhccCCEEEEEcC
Q 023273          218 V-FDAVGQC----DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       218 v-id~~g~~----~~~~~~l~~~G~~v~~g~  243 (284)
                      | ||..|++    +.++++++.+|-+.++.-
T Consensus       133 IDiDPfGs~~pfldsAi~a~~~~Gll~vTaT  163 (375)
T d2dula1         133 IDLDPFGSPMEFLDTALRSAKRRGILGVTAT  163 (375)
T ss_dssp             EEECCSSCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ccCCCCCCcHHHHHHHHHHhccCCEEEEEec
Confidence            5 8999973    899999999999988743

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=86.32  E-value=0.67  Score=31.17  Aligned_cols=34  Identities=18%  Similarity=0.306  Sum_probs=29.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      ++++|+| +|.+|+-++..++.+ |.+|.++.+.+.
T Consensus        22 ~~vvIiG-gG~~G~E~A~~l~~~-g~~Vtlve~~~~   55 (115)
T d1lvla2          22 QHLVVVG-GGYIGLELGIAYRKL-GAQVSVVEARER   55 (115)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHhhc-ccceEEEeeecc
Confidence            7899999 899999999998886 999999987543

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=86.32  E-value=0.36  Score=37.02  Aligned_cols=32  Identities=25%  Similarity=0.361  Sum_probs=26.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      |+|+| +|+.|+.++..+... |.+|++++..++
T Consensus         5 ViIIG-aG~aGl~aA~~la~~-G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIG-GGPSGLMAAIGAAEE-GANVLLLDKGNK   36 (251)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHC-CCcEEEEeCCCC
Confidence            78889 899999888777774 999999997643

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.26  E-value=0.73  Score=33.77  Aligned_cols=71  Identities=18%  Similarity=0.196  Sum_probs=42.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh--hHHHHHHcCCcEEe----e----CCCcccccCCCcccEEEeC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLGADLAI----D----YTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~--~~~~~~~~g~~~~~----~----~~~~~~~~~~~~~d~vid~  221 (284)
                      .+|.|+| +|..|.+.+..+... |.+|.+..+..+  ..+.++.......+    .    ....+..+..+..|+++.+
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~-g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~a   78 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDN-GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG   78 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHH-CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcc
Confidence            3688999 899999988887773 889998887433  34444322110000    0    0011222224578888888


Q ss_pred             CCC
Q 023273          222 VGQ  224 (284)
Q Consensus       222 ~g~  224 (284)
                      +.+
T Consensus        79 vps   81 (180)
T d1txga2          79 VST   81 (180)
T ss_dssp             SCG
T ss_pred             cch
Confidence            774

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.10  E-value=5.7  Score=31.27  Aligned_cols=33  Identities=30%  Similarity=0.375  Sum_probs=29.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEe
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT  183 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~  183 (284)
                      -.|.+|+|-| -|.+|..+++.+... |++|+.+.
T Consensus        34 L~gktvaIqG-fGnVG~~~A~~L~e~-Gakvv~vs   66 (293)
T d1hwxa1          34 FGDKTFAVQG-FGNVGLHSMRYLHRF-GAKCVAVG   66 (293)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEE
Confidence            3678999999 899999999999996 99999876

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=86.04  E-value=2  Score=35.52  Aligned_cols=55  Identities=18%  Similarity=0.186  Sum_probs=42.2

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcCCcEEee
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAID  202 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~  202 (284)
                      .+.+++++| |..++|..|.+.+.+|+.+ |.+.+++..   +++|.+.++.+|++.+..
T Consensus       139 ~~~~~g~~V-VeaSSGN~GiAlA~~aa~l-Gik~~Iv~P~~~~~~K~~~ira~GAeVi~~  196 (382)
T d1wkva1         139 RRVEKGSLV-ADATSSNFGVALSAVARLY-GYRARVYLPGAAEEFGKLLPRLLGAQVIVD  196 (382)
T ss_dssp             TTSCTTCEE-EEECCHHHHHHHHHHHHHT-TCEEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             hccCCCCEE-EEeCCcHHHHHHHHHHHHc-CCCEEEEeeccccccccccccccCcceeec
Confidence            356777764 4455899999999999995 988777764   667888889999876543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=86.01  E-value=0.75  Score=31.19  Aligned_cols=35  Identities=20%  Similarity=0.235  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      ..++++|+| +|.+|+=.++..+.+ |.+|.++.+.+
T Consensus        21 ~p~~i~IiG-~G~ig~E~A~~l~~~-G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIG-AGVIGLELGSVWARL-GAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred             CCCeEEEEC-CChHHHHHHHHHHHc-CCceEEEEeec
Confidence            347899999 899999999999985 99999998754

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.96  E-value=0.64  Score=37.51  Aligned_cols=36  Identities=19%  Similarity=0.222  Sum_probs=31.0

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~  184 (284)
                      ....+++||+||+|-+|...+..+... |.+|+++++
T Consensus        13 ~~~~k~iLVTG~tGfIGs~lv~~L~~~-g~~V~~~d~   48 (341)
T d1sb8a_          13 PAQPKVWLITGVAGFIGSNLLETLLKL-DQKVVGLDN   48 (341)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHC-cCEEEEEEC
Confidence            345578999999999999999988884 999999985

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=85.93  E-value=0.43  Score=35.79  Aligned_cols=31  Identities=16%  Similarity=0.332  Sum_probs=26.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      -|+|+| +|+.|+.++..+... |.+|++++..
T Consensus         5 DvvVIG-gGpaGl~aA~~aa~~-G~kV~vie~~   35 (221)
T d1dxla1           5 DVVIIG-GGPGGYVAAIKAAQL-GFKTTCIEKR   35 (221)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHH-TCCEEEEECS
T ss_pred             CEEEEC-CCHHHHHHHHHHHHC-CCcEEEEEec
Confidence            378889 799999999999885 9999999864

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=85.89  E-value=0.61  Score=37.63  Aligned_cols=94  Identities=22%  Similarity=0.286  Sum_probs=58.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc----------EEeeCCC-cccccCCCcccE
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD----------LAIDYTK-ENIEDLPEKFDV  217 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~----------~~~~~~~-~~~~~~~~~~d~  217 (284)
                      ...++|||+|+  +-|..+-.+++.-...++.+++.+++-.+.++++-..          .++..+. ..+....+.+|+
T Consensus       105 ~~pk~VLIiGg--G~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~~~~~yDv  182 (312)
T d2b2ca1         105 PDPKRVLIIGG--GDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDV  182 (312)
T ss_dssp             SSCCEEEEESC--TTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEE
T ss_pred             CCCCeEEEeCC--CchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHhCCCCCCE
Confidence            34568999984  4455666777763236899999999988888775321          1111110 011122567999


Q ss_pred             EE-eCC---CC---------cHHHHHhhccCCEEEEEcCC
Q 023273          218 VF-DAV---GQ---------CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       218 vi-d~~---g~---------~~~~~~~l~~~G~~v~~g~~  244 (284)
                      || |..   +.         ++.+.++|+++|.++.=++.
T Consensus       183 II~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~s  222 (312)
T d2b2ca1         183 IITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGES  222 (312)
T ss_dssp             EEECCC-------------HHHHHHHHEEEEEEEEEECCC
T ss_pred             EEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecCC
Confidence            87 332   21         26788899999999876543

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.76  E-value=0.14  Score=39.87  Aligned_cols=46  Identities=11%  Similarity=0.062  Sum_probs=33.2

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS  194 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~  194 (284)
                      ....+|++||-+| ||. |..+..+++. ++.+|+.++.++..++.+++
T Consensus        47 ~~~~~g~~vLDlG-cG~-G~~~~~~~~~-~~~~v~giD~S~~~i~~a~~   92 (257)
T d2a14a1          47 PGGLQGDTLIDIG-SGP-TIYQVLAACD-SFQDITLSDFTDRNREELEK   92 (257)
T ss_dssp             TTSCCEEEEEESS-CTT-CCGGGTTGGG-TEEEEEEEESCHHHHHHHHH
T ss_pred             ccCCCCCEEEEEC-CCC-CHhHHHHhcc-ccCcEEEecCCHHHHHHHHH
Confidence            3557788999999 554 5555555555 35579999999998887754

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.72  E-value=0.44  Score=37.99  Aligned_cols=92  Identities=20%  Similarity=0.241  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC----------cEEeeCCC-cccccCCCcccE
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA----------DLAIDYTK-ENIEDLPEKFDV  217 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~----------~~~~~~~~-~~~~~~~~~~d~  217 (284)
                      ...++|||+|+  +-|..+-.+.+.-...++.+++.+++-.+.++++-.          .+++..+. ..+....+.+|+
T Consensus        77 ~~pk~vLiiGg--G~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yDv  154 (285)
T d2o07a1          77 PNPRKVLIIGG--GDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDV  154 (285)
T ss_dssp             SSCCEEEEEEC--TTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred             cCcCeEEEeCC--CchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHHHHHhcCCCCCCE
Confidence            45578999984  445556666665334688899999998888876421          11221111 112223567998


Q ss_pred             EE-eCCC------C------cHHHHHhhccCCEEEEEc
Q 023273          218 VF-DAVG------Q------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       218 vi-d~~g------~------~~~~~~~l~~~G~~v~~g  242 (284)
                      || |...      .      ++.+.++|+++|.++.=.
T Consensus       155 Ii~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         155 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             EEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence            76 4432      1      267888999999998754

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=85.60  E-value=0.69  Score=37.41  Aligned_cols=96  Identities=13%  Similarity=0.132  Sum_probs=56.6

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cC--Cc--EEeeCCCcc----cccCCC
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LG--AD--LAIDYTKEN----IEDLPE  213 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g--~~--~~~~~~~~~----~~~~~~  213 (284)
                      ..+.+|++||-..+  .+|-.++.+++. +...|+.++.++...+.+++    .+  ..  .++..+..+    ..+.++
T Consensus       140 ~~~~~g~~VLdlf~--~~G~~sl~aa~~-ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~l~~~~~~~~  216 (317)
T d2b78a2         140 NGSAAGKTVLNLFS--YTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHL  216 (317)
T ss_dssp             HTTTBTCEEEEETC--TTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTC
T ss_pred             HHhhCCCceeecCC--CCcHHHHHHHhC-CCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHHHHHHHHhhcC
Confidence            45678999987753  333334444554 34579999999988877753    12  11  223322211    112256


Q ss_pred             cccEEE-eC--CC-C--------------cHHHHHhhccCCEEEEEcCC
Q 023273          214 KFDVVF-DA--VG-Q--------------CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       214 ~~d~vi-d~--~g-~--------------~~~~~~~l~~~G~~v~~g~~  244 (284)
                      .||+|| |.  .+ +              ...++++|+++|.++.+...
T Consensus       217 ~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs  265 (317)
T d2b78a2         217 TYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA  265 (317)
T ss_dssp             CEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             CCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            799876 32  21 1              14578899999999987643

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.59  E-value=0.74  Score=31.38  Aligned_cols=34  Identities=15%  Similarity=0.271  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      .++++|+| +|.+|+=+++++..+ |.+|.++.+.+
T Consensus        23 p~~~vIiG-~G~ig~E~A~~l~~l-G~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIG-GGIIGLEMGSVYSRL-GSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred             CCeEEEEC-CCchHHHHHHHHHhh-CcceeEEEecc
Confidence            36899999 899999999999996 99999998754

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=85.58  E-value=0.63  Score=33.29  Aligned_cols=35  Identities=23%  Similarity=0.370  Sum_probs=28.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcC--CeEEEEeCCh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSST  186 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~~~  186 (284)
                      .|++|+|+| +|..|+.++..++.+ +  .+|++++..+
T Consensus         1 ~gkrivIvG-gG~~G~e~A~~l~~~-~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVG-GGTGGATAAKYIKLA-DPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHH-CTTSEEEEECSCS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHc-CCCCcEEEEECCC
Confidence            478999999 899999988888875 4  5777777654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.40  E-value=0.45  Score=38.46  Aligned_cols=33  Identities=15%  Similarity=0.253  Sum_probs=29.0

Q ss_pred             EE-EEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          153 SI-LVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       153 ~v-lI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      +| ||+||+|-+|...+..+... |.+|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~-g~~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEK-GYEVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHC-cCEEEEEECCC
Confidence            57 99999999999999988884 99999999854

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.86  E-value=2.2  Score=34.14  Aligned_cols=57  Identities=21%  Similarity=0.305  Sum_probs=44.7

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcCCcEE
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLA  200 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~  200 (284)
                      .+...++++.+.+|..++|..|.+++..++.+ |.+.+++..   ++.|.+.++.+|++.+
T Consensus        56 ~~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~-g~~~~iv~p~~~~~~k~~~i~~~Ga~vi  115 (320)
T d1z7wa1          56 EKKGLIKPGESVLIEPTSGNTGVGLAFTAAAK-GYKLIITMPASMSTERRIILLAFGVELV  115 (320)
T ss_dssp             HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHH-TCEEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred             HHcCCCCCCCceEEeeCCchHHHHHHHHHHhh-ccceEEeehhhhhhhhhhhhhccCcceE
Confidence            34566677777777777999999999999996 887776653   6778888999998654

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=84.59  E-value=0.52  Score=37.75  Aligned_cols=33  Identities=24%  Similarity=0.340  Sum_probs=28.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      -.|+|+| +|..|++++..++.. |.++.+++..+
T Consensus         8 ~dV~IIG-AG~sGl~~a~~L~~~-G~~v~i~Ek~~   40 (298)
T d1w4xa1           8 VDVLVVG-AGFSGLYALYRLREL-GRSVHVIETAG   40 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred             CCEEEEC-ccHHHHHHHHHHHhC-CCCEEEEEcCC
Confidence            3589999 899999999999985 99999998754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.55  E-value=0.74  Score=31.50  Aligned_cols=33  Identities=12%  Similarity=0.237  Sum_probs=29.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      ++++|+| +|.+|+=++..++.+ |.+|.++.+++
T Consensus        23 k~vvIvG-gG~iG~E~A~~l~~~-G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVG-AGYIAVEMAGILSAL-GSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred             CEEEEEc-CCccHHHHHHHHhcC-CcEEEEEeecc
Confidence            7899999 899999999999985 99999998864

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.51  E-value=0.5  Score=37.75  Aligned_cols=93  Identities=18%  Similarity=0.259  Sum_probs=57.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC---------c-EEeeCCCc-ccccC-CCccc
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA---------D-LAIDYTKE-NIEDL-PEKFD  216 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~---------~-~~~~~~~~-~~~~~-~~~~d  216 (284)
                      ...++|||+|+  +-|..+-.+++.-...++.+++.+++-.+.++++-.         . .++..+.. .+.+. .+.+|
T Consensus        79 ~~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~~~~~~~yD  156 (290)
T d1xj5a_          79 PNPKKVLVIGG--GDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD  156 (290)
T ss_dssp             SCCCEEEEETC--SSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred             CCCcceEEecC--CchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEccHHHHHhhccccCcc
Confidence            34578999984  445555667776323578999999998888876431         1 12211111 12222 34799


Q ss_pred             EEE-eCCCC------------cHHHHHhhccCCEEEEEcC
Q 023273          217 VVF-DAVGQ------------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       217 ~vi-d~~g~------------~~~~~~~l~~~G~~v~~g~  243 (284)
                      +|| |.+..            ++.+.++|+++|.++.=.+
T Consensus       157 vIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~  196 (290)
T d1xj5a_         157 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE  196 (290)
T ss_dssp             EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEecC
Confidence            875 44321            2678899999999987543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=84.46  E-value=0.93  Score=31.08  Aligned_cols=36  Identities=14%  Similarity=0.225  Sum_probs=30.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      +..++++|+| +|.+|+=+++..+.+ |.+|.++.+.+
T Consensus        24 ~~p~~vvIiG-gG~IG~E~A~~~~~~-G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIG-GGIIGLEMGTVYSTL-GSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEES-CSHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred             ccCCeEEEEC-CCHHHHHHHHHhhcC-CCEEEEEEeec
Confidence            3457999999 899999999999986 99999998754

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=84.45  E-value=0.51  Score=34.24  Aligned_cols=30  Identities=17%  Similarity=0.317  Sum_probs=26.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~  184 (284)
                      -|+|+| +|+.|+.|+..+... |.++.+++.
T Consensus         3 DViIIG-gGpaGl~AAi~aar~-G~~v~iie~   32 (184)
T d1fl2a1           3 DVLIVG-SGPAGAAAAIYSARK-GIRTGLMGE   32 (184)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTT-TCCEEEECS
T ss_pred             cEEEEC-cCHHHHHHHHHHHHc-CCeEEEEEE
Confidence            478999 899999999998884 999999875

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=84.35  E-value=1.9  Score=31.29  Aligned_cols=91  Identities=22%  Similarity=0.268  Sum_probs=51.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-Ch-----hhHHHHH-Hc-CCcEEeeCCCcccccCCCcccEEEeCCCC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS-ST-----AKLDLLR-SL-GADLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~-----~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~d~vid~~g~  224 (284)
                      +|.|+||+|-+|.-.++++..+....+..+.. +.     ++..... .+ +..........+......++|++|-|.++
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvf~alp~   82 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVRDFSADVDVVFLATAH   82 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCGGGTCTTCCEEEECSCH
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhhhhhhcccceeeccccc
Confidence            68999999999999999988754566654432 21     1222221 11 11100000011122224679999999885


Q ss_pred             --c-HHHHHhhccCCEEEEEcC
Q 023273          225 --C-DKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g~  243 (284)
                        . +..-..+..+-+++..+.
T Consensus        83 ~~s~~~~~~~~~~~~~vIDlSa  104 (179)
T d2g17a1          83 EVSHDLAPQFLQAGCVVFDLSG  104 (179)
T ss_dssp             HHHHHHHHHHHHTTCEEEECSS
T ss_pred             hhHHHHhhhhhhcCceeecccc
Confidence              2 344445556666766654

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.28  E-value=0.57  Score=35.33  Aligned_cols=32  Identities=16%  Similarity=0.364  Sum_probs=26.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      -|+|+| +|+.|+.|+..+..+ |.+|.+++..+
T Consensus         7 DviVIG-~GpAGl~aA~~aa~~-G~kV~lie~~~   38 (233)
T d1v59a1           7 DVVIIG-GGPAGYVAAIKAAQL-GFNTACVEKRG   38 (233)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred             CEEEEC-CCHHHHHHHHHHHHC-CCcEEEEEecC
Confidence            378889 899999988888875 99999998754

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.75  E-value=0.65  Score=37.54  Aligned_cols=32  Identities=28%  Similarity=0.416  Sum_probs=28.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~  184 (284)
                      ++|||+||+|-+|...+..+... |.+|+++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~-g~~V~~ld~   34 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEA-GYLPVVIDN   34 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHC-cCEEEEEEC
Confidence            68999999999999998888884 899999863

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.52  E-value=0.54  Score=37.52  Aligned_cols=32  Identities=13%  Similarity=0.289  Sum_probs=27.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      .|+|+| +|..|+.++..+... |.+|.+++.++
T Consensus         3 dv~IIG-aG~sGl~~A~~L~~~-g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVG-SGLFGAVCANELKKL-NKKVLVIEKRN   34 (298)
T ss_dssp             EEEEEC-CSHHHHHHHHHHGGG-TCCEEEECSSS
T ss_pred             cEEEEC-CcHHHHHHHHHHHhC-CCcEEEEECCC
Confidence            478999 899999999999885 99999998764

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=83.52  E-value=4.9  Score=32.01  Aligned_cols=96  Identities=24%  Similarity=0.272  Sum_probs=57.7

Q ss_pred             HhcccCCCCEEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChhhHHHHH----HcCCcEEeeC--CCcccccCCCccc
Q 023273          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLR----SLGADLAIDY--TKENIEDLPEKFD  216 (284)
Q Consensus       144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~--~~~~~~~~~~~~d  216 (284)
                      ....+++|++||-.- +++=|. +.+++..+ ....+++.+.+++|...++    .+|...++..  +...+......||
T Consensus       110 ~~l~~~~g~~vlD~C-AapGgK-t~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~~~~~~~fD  187 (313)
T d1ixka_         110 VALDPKPGEIVADMA-AAPGGK-TSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFD  187 (313)
T ss_dssp             HHHCCCTTCEEEECC-SSCSHH-HHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEE
T ss_pred             hcccCCccceeeecc-cchhhh-hHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhcccccccccccccccccccc
Confidence            345789999987664 233233 23333332 2457899999999887663    4665444332  2223334456789


Q ss_pred             EEE-e--CCCC------c----------------------HHHHHhhccCCEEEEE
Q 023273          217 VVF-D--AVGQ------C----------------------DKALKAVKEGGRVVSI  241 (284)
Q Consensus       217 ~vi-d--~~g~------~----------------------~~~~~~l~~~G~~v~~  241 (284)
                      .|+ |  |+|.      +                      ..++++++++|++|-.
T Consensus       188 ~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYs  243 (313)
T d1ixka_         188 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYS  243 (313)
T ss_dssp             EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEe
Confidence            775 4  4552      1                      2588899999998744

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=83.49  E-value=0.6  Score=34.93  Aligned_cols=30  Identities=20%  Similarity=0.281  Sum_probs=26.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      |+|+| +|+.|+.++..|..+ |.+|.+++.+
T Consensus         5 vvVIG-~G~aG~~aA~~a~~~-G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIG-GGSGGIASINRAAMY-GQKCALIEAK   34 (217)
T ss_dssp             EEEEC-CSHHHHHHHHHHHTT-TCCEEEEESS
T ss_pred             EEEEC-CCHHHHHHHHHHHHC-CCEEEEEecc
Confidence            78899 799999999999985 9999999864

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.47  E-value=0.58  Score=37.34  Aligned_cols=31  Identities=23%  Similarity=0.377  Sum_probs=26.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      |+|+| +|..|+.++..++.. |.+|++++.++
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~-G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDS-GLNVVVLEARD   32 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred             EEEEC-CCHHHHHHHHHHHhC-CCCEEEEecCC
Confidence            78899 899999998888885 99999998754

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=83.31  E-value=1  Score=33.72  Aligned_cols=70  Identities=14%  Similarity=0.175  Sum_probs=43.9

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-EEeeCCCcccccCCCcccEEEe
Q 023273          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVVFD  220 (284)
Q Consensus       146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~d~vid  220 (284)
                      .+-..|++||-.|+ | .|..++.++.. +..+|+.++.+++..+.+++    .+.. .++..+   .....+.+|+||.
T Consensus        42 ~~dl~g~~vLDlg~-G-tG~l~i~a~~~-g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d---~~~~~~~fD~Vi~  115 (201)
T d1wy7a1          42 LGDIEGKVVADLGA-G-TGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGD---VSEFNSRVDIVIM  115 (201)
T ss_dssp             TTSSTTCEEEEETC-T-TCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESC---GGGCCCCCSEEEE
T ss_pred             cCCCCCCEEEECcC-c-chHHHHHHHHc-CCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECc---hhhhCCcCcEEEE
Confidence            33446889999984 3 34445555554 45689999999998888764    2322 233322   2334678999886


Q ss_pred             C
Q 023273          221 A  221 (284)
Q Consensus       221 ~  221 (284)
                      .
T Consensus       116 n  116 (201)
T d1wy7a1         116 N  116 (201)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=82.68  E-value=0.96  Score=33.42  Aligned_cols=40  Identities=23%  Similarity=0.226  Sum_probs=33.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS  194 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~  194 (284)
                      ++|.|+| .|-+|+..+.++ +. |.+|+.++.++++.+.++.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~-g~~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SL-QNEVTIVDILPSKVDKINN   40 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TT-TSEEEEECSCHHHHHHHHT
T ss_pred             CEEEEEC-CChhHHHHHHHH-HC-CCcEEEEECCHHHHHHHhh
Confidence            3688998 899999987655 54 8999999999999888764

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=82.66  E-value=2.1  Score=30.15  Aligned_cols=81  Identities=17%  Similarity=0.210  Sum_probs=41.2

Q ss_pred             EEEEEcCCchHHHHHHHH-HHHh--cCCeEEEEeCChhhHHHHHHcCCc-EEeeCCCcccccCCCcccEEEeCCCC--cH
Q 023273          153 SILVLGGAGGVGTMVIQL-AKHV--FGASKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPEKFDVVFDAVGQ--CD  226 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~-a~~~--~g~~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~d~vid~~g~--~~  226 (284)
                      +|.|+||+|-+|.-.+++ ..+.  .-..+....++...-......... ...+.  .+... ..++|++|-|+++  ..
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~--~~~~~-~~~~DivF~a~~~~~s~   79 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDA--FDLEA-LKALDIIVTCQGGDYTN   79 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEET--TCHHH-HHTCSEEEECSCHHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecc--cchhh-hhcCcEEEEecCchHHH
Confidence            689999999999998874 4331  124455554432211110000000 01111  01001 2579999999985  34


Q ss_pred             HHHHhhccCC
Q 023273          227 KALKAVKEGG  236 (284)
Q Consensus       227 ~~~~~l~~~G  236 (284)
                      .....+...|
T Consensus        80 ~~~~~~~~~g   89 (146)
T d1t4ba1          80 EIYPKLRESG   89 (146)
T ss_dssp             HHHHHHHHTT
T ss_pred             HhhHHHHhcC
Confidence            4444444444

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.64  E-value=0.97  Score=30.77  Aligned_cols=33  Identities=21%  Similarity=0.183  Sum_probs=28.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      .++++|+| +|.+|+=.++.++.+ |.+|.++.++
T Consensus        20 P~~vvIIG-gG~iG~E~A~~l~~l-G~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVG-ASYVALECAGFLAGI-GLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred             CCeEEEEC-CCccHHHHHHHHhhc-CCeEEEEEec
Confidence            36799999 899999999999996 9999998764

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=82.53  E-value=6.1  Score=29.18  Aligned_cols=90  Identities=13%  Similarity=0.195  Sum_probs=57.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcEE--eeCCCccccc-C-CCcccEEEeCC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA--IDYTKENIED-L-PEKFDVVFDAV  222 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~--~~~~~~~~~~-~-~~~~d~vid~~  222 (284)
                      +-.||-+|  .+.|..++.+|+......++.++.++..+..+    ++.+.+.+  +..+...+.. . ...+|.|+-..
T Consensus        30 ~PlvLeIG--cG~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l~~~~~~~~~d~v~i~f  107 (204)
T d2fcaa1          30 NPIHIEVG--TGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF  107 (204)
T ss_dssp             CCEEEEEC--CTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred             CceEEEEE--ecCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhhhcccCchhhhcccccc
Confidence            34567777  46688888899885578999999998877666    34554332  2222222221 2 34588776543


Q ss_pred             CC-----------------cHHHHHhhccCCEEEEEc
Q 023273          223 GQ-----------------CDKALKAVKEGGRVVSII  242 (284)
Q Consensus       223 g~-----------------~~~~~~~l~~~G~~v~~g  242 (284)
                      ..                 ++.+.+.|+++|.+.+..
T Consensus       108 p~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~T  144 (204)
T d2fcaa1         108 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT  144 (204)
T ss_dssp             CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred             ccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence            32                 145778999999998753

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=82.48  E-value=2.9  Score=33.21  Aligned_cols=56  Identities=23%  Similarity=0.314  Sum_probs=41.8

Q ss_pred             HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcCCcEE
Q 023273          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLA  200 (284)
Q Consensus       143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~  200 (284)
                      .+...+.++++|+.. ++|..|.+++..|+.. |.+.+++..   ++.|.+.++.+|++.+
T Consensus        53 ~~~g~~~~~~~vv~~-SsGN~g~a~A~~a~~~-G~~~~i~~p~~~~~~k~~~~~~~GA~vv  111 (310)
T d1y7la1          53 EKDGTLTKGKEIVDA-TSGNTGIALAYVAAAR-GYKITLTMPETMSLERKRLLCGLGVNLV  111 (310)
T ss_dssp             HHTTSSCTTCEEEES-CCSHHHHHHHHHHHHH-TCCEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred             HHcCCCCCCceeeee-cCCCchHHHHHHHHHh-hccccccchhhhhhhhhhhHHHhCCceE
Confidence            344556777765554 4999999999999996 887666653   6678888899998655

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=82.39  E-value=8.5  Score=29.25  Aligned_cols=35  Identities=26%  Similarity=0.415  Sum_probs=30.7

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~  184 (284)
                      --.|.+|+|-| -|.+|..+++++... |++++.+..
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~-Gakvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKM-GAKVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEEEC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEeec
Confidence            34789999999 999999999999996 999987764

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=82.36  E-value=4.4  Score=28.15  Aligned_cols=68  Identities=18%  Similarity=0.160  Sum_probs=38.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCC--eEEEEeCChhhH-HHHHHcCC-----cEEeeCCCcccccCCCcccEEEeCCCC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKL-DLLRSLGA-----DLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~--~vi~~~~~~~~~-~~~~~~g~-----~~~~~~~~~~~~~~~~~~d~vid~~g~  224 (284)
                      +|.|+| +|.+|..++..+... +.  ++..++..+++. .++.++..     ...... ..++.. ..+.|+|+-++|.
T Consensus         3 KI~IIG-aG~VG~~~a~~l~~~-~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~-~~~~~~-~~~adivvitag~   78 (142)
T d1y6ja1           3 KVAIIG-AGFVGASAAFTMALR-QTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-AGDYSD-VKDCDVIVVTAGA   78 (142)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHT-TCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC---CGGG-GTTCSEEEECCCC
T ss_pred             eEEEEC-CCHHHHHHHHHHHhc-CCCCEEEEEeccCCccceeeeeeccCcccCCCeeEe-eCcHHH-hCCCceEEEeccc
Confidence            578889 599999888777664 43  677888777653 33333321     111111 122222 3689999999883

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.33  E-value=0.77  Score=34.26  Aligned_cols=30  Identities=27%  Similarity=0.338  Sum_probs=26.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      |+|+| +|+.|+.++..|... |.+|.+++..
T Consensus         6 viVIG-~GpaGl~aA~~aar~-G~kV~vIEk~   35 (223)
T d1ebda1           6 TLVVG-AGPGGYVAAIRAAQL-GQKVTIVEKG   35 (223)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred             EEEEC-CCHHHHHHHHHHHHC-CCEEEEEecC
Confidence            67889 899999999999885 9999999764

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.27  E-value=5.5  Score=27.46  Aligned_cols=88  Identities=16%  Similarity=0.098  Sum_probs=50.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHH-HH------cCCcEEeeCCCcccccCCCcccEEEeCCCC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLL-RS------LGADLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~-~~------~g~~~~~~~~~~~~~~~~~~~d~vid~~g~  224 (284)
                      +|.|+| +|.+|..++..+.... ..++...+.++++.+-. .+      +.....+.  ..++.. .++.|+|+-++|.
T Consensus         2 KI~IIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~--~~~~~~-~~~adivvitag~   77 (140)
T d1a5za1           2 KIGIVG-LGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY--AGDYAD-LKGSDVVIVAAGV   77 (140)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE--ECCGGG-GTTCSEEEECCCC
T ss_pred             EEEEEC-cCHHHHHHHHHHHhCCCCCEEEEEecccccccchhcccccccccccccccc--CCcHHH-hcCCCEEEEeccc
Confidence            678899 5999988777665532 24677778777654322 11      11111111  122233 4689999999873


Q ss_pred             c---------------------HHHHHhhccCCEEEEEcCC
Q 023273          225 C---------------------DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       225 ~---------------------~~~~~~l~~~G~~v~~g~~  244 (284)
                      +                     -..+....|++.++.+..|
T Consensus        78 ~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvtNP  118 (140)
T d1a5za1          78 PQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNP  118 (140)
T ss_dssp             CCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             ccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeCCc
Confidence            1                     0234445567877766644

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=82.20  E-value=1.8  Score=30.65  Aligned_cols=70  Identities=16%  Similarity=0.166  Sum_probs=41.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHH-HHHHc-------CCcEEeeCCCcccccCCCcccEEEe
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLD-LLRSL-------GADLAIDYTKENIEDLPEKFDVVFD  220 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~-~~~~~-------g~~~~~~~~~~~~~~~~~~~d~vid  220 (284)
                      |..+|.|+| +|.+|..++.++... + .++...+..+++.+ .+.++       +....+.. ..++.. ..+.|+++-
T Consensus         2 p~~KI~IIG-aG~VG~~~a~~l~~~-~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~-~~~~~~-~~~advvvi   77 (150)
T d1t2da1           2 PKAKIVLVG-SGMIGGVMATLIVQK-NLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-SNTYDD-LAGADVVIV   77 (150)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-ECCGGG-GTTCSEEEE
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHhC-CCCeEEEEeccCCcceeeecchhhhccccCCCcEEEe-cccccc-cCCCcEEEE
Confidence            456899999 699998887777663 5 46667777666532 22221       11111111 122222 368999998


Q ss_pred             CCC
Q 023273          221 AVG  223 (284)
Q Consensus       221 ~~g  223 (284)
                      +.|
T Consensus        78 tag   80 (150)
T d1t2da1          78 TAG   80 (150)
T ss_dssp             CCS
T ss_pred             ecc
Confidence            887

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=82.08  E-value=4.8  Score=27.06  Aligned_cols=87  Identities=10%  Similarity=0.138  Sum_probs=56.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC-CC-cccccC-CCcccEEEeCCCCc---
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY-TK-ENIEDL-PEKFDVVFDAVGQC---  225 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~-~~-~~~~~~-~~~~d~vid~~g~~---  225 (284)
                      ++++|.| .|.+|..+++..+   +..+++++.++++.+.++..|...+.-. .+ +.+.+. -..++.++-++.+.   
T Consensus         1 kHivI~G-~g~~g~~l~~~L~---~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~d~~n   76 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR---GSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLESDSET   76 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC---GGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCSSHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHc---CCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEeccchhhh
Confidence            3688889 7999987777654   4568888999999888888776543321 11 113222 35688888887752   


Q ss_pred             ---HHHHHhhccCCEEEEEc
Q 023273          226 ---DKALKAVKEGGRVVSII  242 (284)
Q Consensus       226 ---~~~~~~l~~~G~~v~~g  242 (284)
                         -...+.+.+..+++...
T Consensus        77 ~~~~~~~r~~~~~~~iia~~   96 (129)
T d2fy8a1          77 IHCILGIRKIDESVRIIAEA   96 (129)
T ss_dssp             HHHHHHHHHHCSSSCEEEEC
T ss_pred             HHHHHHHHHHCCCceEEEEE
Confidence               34555666776665543

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.04  E-value=3.8  Score=32.15  Aligned_cols=95  Identities=22%  Similarity=0.207  Sum_probs=56.6

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcEE-eeCCCccccc--CCCcccE
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLA-IDYTKENIED--LPEKFDV  217 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~-~~~~~~~~~~--~~~~~d~  217 (284)
                      ....++|++||-.- +++=|..+ +++..+...++++.+.++.|++.++    .+|...+ +.........  ....||.
T Consensus        97 ~L~~~~g~~vLD~C-AaPGgKt~-~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~~~~~~~~~fd~  174 (284)
T d1sqga2          97 WLAPQNGEHILDLC-AAPGGKTT-HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDR  174 (284)
T ss_dssp             HHCCCTTCEEEEES-CTTCHHHH-HHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEE
T ss_pred             ccCccccceeEecc-Cccccchh-hhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccccchhcccccccE
Confidence            44778999998764 33334333 2333333568999999999987764    5665432 2222221111  2456997


Q ss_pred             EE-e--CCCC------c----------------------HHHHHhhccCCEEEEE
Q 023273          218 VF-D--AVGQ------C----------------------DKALKAVKEGGRVVSI  241 (284)
Q Consensus       218 vi-d--~~g~------~----------------------~~~~~~l~~~G~~v~~  241 (284)
                      |+ |  |+|.      +                      ..++++|+++|++|-.
T Consensus       175 IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYs  229 (284)
T d1sqga2         175 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA  229 (284)
T ss_dssp             EEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             EEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence            75 5  5552      1                      2477789999998743

>d1xdza_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glucose-inhibited division protein B (GidB)
domain: Glucose-inhibited division protein B (GidB)
species: Bacillus subtilis [TaxId: 1423]

Probab=82.03  E-value=3  Score=31.96  Aligned_cols=94  Identities=18%  Similarity=0.236  Sum_probs=62.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCC--cEEeeCCCcccc---cCCCcccEEE
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGA--DLAIDYTKENIE---DLPEKFDVVF  219 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~--~~~~~~~~~~~~---~~~~~~d~vi  219 (284)
                      ..+.+++-+|+.+++  =.+-+|-.....+++.++++.+|..+++    +++-  ..+++.+.+.+.   ...+.+|+|.
T Consensus        69 ~~~~~ilDiGSGaGf--PGi~laI~~p~~~v~Lves~~KK~~FL~~v~~~L~L~n~~i~~~R~E~~~~~~~~~~~~D~v~  146 (239)
T d1xdza_          69 NQVNTICDVGAGAGF--PSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVT  146 (239)
T ss_dssp             GGCCEEEEECSSSCT--THHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEE
T ss_pred             cCCCeEEeecCCCch--HHHHHHHhCCCccceeecchHHHHHHHHHHHHHhCCCCcEEEeehhhhccccccccccceEEE
Confidence            456788888864444  3334444334789999999999998875    4553  344554433332   2245799998


Q ss_pred             eC-CCCc----HHHHHhhccCCEEEEEcCC
Q 023273          220 DA-VGQC----DKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       220 d~-~g~~----~~~~~~l~~~G~~v~~g~~  244 (284)
                      .- ++..    ..+..+++++|+++.+-+.
T Consensus       147 sRAva~l~~ll~~~~~~l~~~g~~i~~KG~  176 (239)
T d1xdza_         147 ARAVARLSVLSELCLPLVKKNGLFVALKAA  176 (239)
T ss_dssp             EECCSCHHHHHHHHGGGEEEEEEEEEEECC
T ss_pred             EhhhhCHHHHHHHHhhhcccCCEEEEECCC
Confidence            74 4553    5677788899999988544

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=81.90  E-value=0.77  Score=34.45  Aligned_cols=31  Identities=23%  Similarity=0.409  Sum_probs=27.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      .++|+| +|+.|+.++..+..+ |.+|.+++..
T Consensus         7 DlvVIG-~GpaGl~aA~~aa~~-G~~V~liE~~   37 (220)
T d1lvla1           7 TLLIIG-GGPGGYVAAIRAGQL-GIPTVLVEGQ   37 (220)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHH-TCCEEEECSS
T ss_pred             CEEEEC-CCHHHHHHHHHHHHC-CCcEEEEecC
Confidence            478889 899999999999996 9999999864

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=81.88  E-value=0.59  Score=37.14  Aligned_cols=34  Identities=15%  Similarity=0.321  Sum_probs=28.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      .++|||+|++|-+|...++.+.. .|..+++++..
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~-~g~~vi~~~~~   35 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQ-RGDVELVLRTR   35 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTT-CTTEEEECCCT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHH-CcCEEEEecCc
Confidence            35899999999999999998887 48888776543

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=81.78  E-value=0.81  Score=34.61  Aligned_cols=32  Identities=22%  Similarity=0.231  Sum_probs=27.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~  186 (284)
                      -|+|+| +|+.|+.|+..+... |.+|.+++..+
T Consensus         8 DviIIG-~GPaGlsaA~~aa~~-G~~V~viE~~~   39 (229)
T d1ojta1           8 DVVVLG-GGPGGYSAAFAAADE-GLKVAIVERYK   39 (229)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHC-CCeEEEEeccC
Confidence            378889 899999999999885 99999998654

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=81.56  E-value=2.3  Score=31.35  Aligned_cols=94  Identities=16%  Similarity=0.138  Sum_probs=55.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhc----CCeEEEE-eC--ChhhHHHHHHcC-------CcE---------------EeeC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVF----GASKVAA-TS--STAKLDLLRSLG-------ADL---------------AIDY  203 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~----g~~vi~~-~~--~~~~~~~~~~~g-------~~~---------------~~~~  203 (284)
                      +|.|.| -|-+|+.+.+.+....    ..+++.+ +.  +.+....+-++.       .+.               +++.
T Consensus         4 kigING-FGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~~~~~~~ayLlkyDSvhG~~~~~v~~~~~~~~~~~~~~~i~~g   82 (190)
T d1k3ta1           4 KVGING-FGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVVNG   82 (190)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCBTTTEEEEEEEESCCCHHHHHHHHHEETTTEECSSCEEEECSSTTCSSCCEEEETT
T ss_pred             EEEEEC-CChHHHHHHHHHHHcCCCCCCeEEEEEecCCCCHHHHHHHhhccccccCCCceEEEccCccccccccceEEcC
Confidence            678888 9999999998765421    1244433 22  445555553321       110               1110


Q ss_pred             ----------CCcccccCCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCC
Q 023273          204 ----------TKENIEDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP  247 (284)
Q Consensus       204 ----------~~~~~~~~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~  247 (284)
                                +..+.++...++|+||||+|.   .+.+...+..+-+-|+++.|...
T Consensus        83 ~~i~~~~~~~~p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~~~  139 (190)
T d1k3ta1          83 HRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASG  139 (190)
T ss_dssp             EEEEEEECCSCGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS
T ss_pred             ceEEecccCCChhHCCHhhcCCcEEEEecccccccccchhhcccCcceeeeccCCcc
Confidence                      011111112389999999995   37788889988787888777543

>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Chalcone O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=81.45  E-value=0.82  Score=35.41  Aligned_cols=89  Identities=13%  Similarity=0.143  Sum_probs=53.5

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC-CcEEeeCCCcccccCCCcccEEEeC-C-CC
Q 023273          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG-ADLAIDYTKENIEDLPEKFDVVFDA-V-GQ  224 (284)
Q Consensus       148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~d~vid~-~-g~  224 (284)
                      .....+|+-+|  |+.|..++.++++..+.+.++.+..+-    +++.. .+++---..+-+...+ +.|+++-. + .+
T Consensus        79 f~~~~~vlDiG--GG~G~~~~~l~~~~P~l~~~v~Dlp~v----i~~~~~~~ri~~~~gd~~~~~p-~~D~~~l~~vLh~  151 (244)
T d1fp1d2          79 FEGISTLVDVG--GGSGRNLELIISKYPLIKGINFDLPQV----IENAPPLSGIEHVGGDMFASVP-QGDAMILKAVCHN  151 (244)
T ss_dssp             TTTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEECHHH----HTTCCCCTTEEEEECCTTTCCC-CEEEEEEESSGGG
T ss_pred             ccCCcEEEEec--CCCcHHHHHHHHHCCCCeEEEecchhh----hhccCCCCCeEEecCCcccccc-cceEEEEehhhhh
Confidence            45567888877  677889999998866789998887421    22222 1111101111123333 44877643 2 11


Q ss_pred             ---------cHHHHHhhccCCEEEEEcC
Q 023273          225 ---------CDKALKAVKEGGRVVSIIG  243 (284)
Q Consensus       225 ---------~~~~~~~l~~~G~~v~~g~  243 (284)
                               ++.+.+.|+++|+++++..
T Consensus       152 ~~de~~~~iL~~~~~aL~pgg~llI~e~  179 (244)
T d1fp1d2         152 WSDEKCIEFLSNCHKALSPNGKVIIVEF  179 (244)
T ss_dssp             SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence                     2667788999999998854

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.40  E-value=0.69  Score=33.89  Aligned_cols=32  Identities=25%  Similarity=0.347  Sum_probs=27.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (284)
Q Consensus       151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~  184 (284)
                      +..|+|+| .|+.|+.|+..+... |.+++++++
T Consensus         5 ~~dVvIIG-GGpaGl~AA~~~ar~-g~~v~iie~   36 (190)
T d1trba1           5 HSKLLILG-SGPAGYTAAVYAARA-NLQPVLITG   36 (190)
T ss_dssp             EEEEEEEC-CSHHHHHHHHHHHTT-TCCCEEECC
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHc-CCceEEEEe
Confidence            45799999 899999999888885 999998864

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=81.36  E-value=1.8  Score=30.72  Aligned_cols=72  Identities=17%  Similarity=0.147  Sum_probs=42.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHH-HHc-------CCcEEeeCCCcccccCCCcccEEE
Q 023273          149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-RSL-------GADLAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~-~~~-------g~~~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      +...+|.|+| +|.+|..++.++... + .++++.+.++++.+-. .++       +....+.. ..+..+..++.|+|+
T Consensus         5 ~k~~KI~IIG-aG~VG~~lA~~l~~~-~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~-~~~~~~~~~~adiVv   81 (154)
T d1pzga1           5 QRRKKVAMIG-SGMIGGTMGYLCALR-ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-EYSYEAALTGADCVI   81 (154)
T ss_dssp             SCCCEEEEEC-CSHHHHHHHHHHHHH-TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-ECSHHHHHTTCSEEE
T ss_pred             cCCCcEEEEC-CCHHHHHHHHHHHhC-CCceEEEEEeccccchhHHHHHhhhccccCCeeEEec-cCchhhhhcCCCeEE
Confidence            4567899999 599998877766664 5 4788888777654322 221       11111111 111222236899999


Q ss_pred             eCCC
Q 023273          220 DAVG  223 (284)
Q Consensus       220 d~~g  223 (284)
                      -++|
T Consensus        82 itag   85 (154)
T d1pzga1          82 VTAG   85 (154)
T ss_dssp             ECCS
T ss_pred             Eecc
Confidence            8876

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=81.29  E-value=0.81  Score=36.88  Aligned_cols=35  Identities=14%  Similarity=0.103  Sum_probs=26.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChh
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTA  187 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~  187 (284)
                      ++|+|+| +|..|++++..++..+ +.+|++++++++
T Consensus         5 KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            5899999 8999999886655432 358999988753

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=81.24  E-value=6.6  Score=27.17  Aligned_cols=67  Identities=10%  Similarity=0.060  Sum_probs=40.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHH-HHH-------cCC-cEEeeCCCcccccCCCcccEEEeCC
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDL-LRS-------LGA-DLAIDYTKENIEDLPEKFDVVFDAV  222 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~-~~~-------~g~-~~~~~~~~~~~~~~~~~~d~vid~~  222 (284)
                      +|.|+| +|.+|..++..+...+- -+++.++.++++.+- +.+       +.. ..+...  .+++ ...+.|+|+-++
T Consensus         2 KI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~-~~~~adiVvita   77 (142)
T d1ojua1           2 KLGFVG-AGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-LLKGSEIIVVTA   77 (142)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG-GGTTCSEEEECC
T ss_pred             EEEEEC-cCHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHH-HhccccEEEEec
Confidence            688999 69999888877665422 357777777776422 111       121 122221  1222 247899999888


Q ss_pred             C
Q 023273          223 G  223 (284)
Q Consensus       223 g  223 (284)
                      |
T Consensus        78 g   78 (142)
T d1ojua1          78 G   78 (142)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=81.18  E-value=6.7  Score=27.20  Aligned_cols=68  Identities=19%  Similarity=0.239  Sum_probs=41.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCC--eEEEEeCChhhHHH-H---HH---c-CCcEEeeCCCcccccCCCcccEEEeC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDL-L---RS---L-GADLAIDYTKENIEDLPEKFDVVFDA  221 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~--~vi~~~~~~~~~~~-~---~~---~-g~~~~~~~~~~~~~~~~~~~d~vid~  221 (284)
                      .+|.|+| +|.+|..++..+... +.  +++..+..+++.+- +   ++   + +...+...  .+++. ..+.|+|+-+
T Consensus         2 ~Ki~IIG-aG~VG~~~a~~l~~~-~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~-~~daDvVVit   76 (143)
T d1llda1           2 TKLAVIG-AGAVGSTLAFAAAQR-GIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI-CRDADMVVIT   76 (143)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT-TCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG-GTTCSEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhc-CCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHH-hhCCcEEEEe
Confidence            3588889 699999988776663 43  57777777766432 1   11   1 11222211  22333 3679999999


Q ss_pred             CCC
Q 023273          222 VGQ  224 (284)
Q Consensus       222 ~g~  224 (284)
                      +|.
T Consensus        77 aG~   79 (143)
T d1llda1          77 AGP   79 (143)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            884

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=81.16  E-value=1.2  Score=32.58  Aligned_cols=88  Identities=19%  Similarity=0.218  Sum_probs=48.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh---hHHHHH-HcCCcEEeeCCCcccccCCCcccEEEeCCCCc--H
Q 023273          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA---KLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVGQC--D  226 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~---~~~~~~-~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~--~  226 (284)
                      +|.|+||+|-+|.-.++++..+....+..+..+..   +..... .+-....+..  .+......++|++|-+.++.  .
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~--~~~~~~~~~~dvvf~a~p~~~s~   80 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSE--FDPEKVSKNCDVLFTALPAGASY   80 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBC--CCHHHHHHHCSEEEECCSTTHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccc--cCHhHhccccceEEEccccHHHH
Confidence            68899999999999988887755566666654322   122111 1111111111  11112234799999998752  2


Q ss_pred             HHHHhhccCCEEEEEcC
Q 023273          227 KALKAVKEGGRVVSIIG  243 (284)
Q Consensus       227 ~~~~~l~~~G~~v~~g~  243 (284)
                      ..... ..+-++|.++.
T Consensus        81 ~~~~~-~~~~~VIDlSa   96 (176)
T d1vkna1          81 DLVRE-LKGVKIIDLGA   96 (176)
T ss_dssp             HHHTT-CCSCEEEESSS
T ss_pred             HHHHh-hccceEEecCc
Confidence            22222 34556666554

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=80.97  E-value=0.95  Score=33.72  Aligned_cols=30  Identities=20%  Similarity=0.334  Sum_probs=26.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (284)
Q Consensus       154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~  185 (284)
                      |+|+| +|+-|+.|+..|... |.+|.+++..
T Consensus         6 viIIG-gGpAGl~aA~~aar~-G~~V~viE~~   35 (229)
T d3lada1           6 VIVIG-AGPGGYVAAIKSAQL-GLKTALIEKY   35 (229)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHH-TCCEEEEECC
T ss_pred             EEEEC-cCHHHHHHHHHHHHC-CCeEEEEecc
Confidence            78889 799999999999885 9999999853

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.92  E-value=0.78  Score=33.74  Aligned_cols=31  Identities=10%  Similarity=0.160  Sum_probs=26.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~  184 (284)
                      ..|+|+| +|+.|+.|+..+... |.++++++.
T Consensus         6 ~~VvIIG-gGpaGl~aA~~~ar~-g~~v~vie~   36 (192)
T d1vdca1           6 TRLCIVG-SGPAAHTAAIYAARA-ELKPLLFEG   36 (192)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHT-TCCCEEECC
T ss_pred             ceEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEe
Confidence            5789999 899999988888774 999998863

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=80.54  E-value=4.4  Score=28.08  Aligned_cols=70  Identities=21%  Similarity=0.149  Sum_probs=41.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH-HHHcC-------CcEEeeCCCcccccCCCcccEEEeCCC
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL-LRSLG-------ADLAIDYTKENIEDLPEKFDVVFDAVG  223 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~-~~~~g-------~~~~~~~~~~~~~~~~~~~d~vid~~g  223 (284)
                      .+|.|+| +|.+|..++.++....-.+++.++..+++.+- +.++.       ....+.. ..++.. ..+.|+++-++|
T Consensus         2 ~KI~IIG-aG~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~-~~d~~~-~~~advvvitag   78 (142)
T d1uxja1           2 KKISIIG-AGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG-TNNYAD-TANSDVIVVTSG   78 (142)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-ESCGGG-GTTCSEEEECCS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEe-cCcHHH-hcCCCEEEEeee
Confidence            3688999 69999887766655323578888876665432 22321       1100111 122233 367999999988


Q ss_pred             C
Q 023273          224 Q  224 (284)
Q Consensus       224 ~  224 (284)
                      .
T Consensus        79 ~   79 (142)
T d1uxja1          79 A   79 (142)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=80.54  E-value=0.98  Score=34.05  Aligned_cols=34  Identities=21%  Similarity=0.100  Sum_probs=26.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChh
Q 023273          153 SILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTA  187 (284)
Q Consensus       153 ~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~  187 (284)
                      +|+|+| +|+.|+.|+..++.. .+.+|++++..+.
T Consensus         3 kv~iIG-aGpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           3 QICVVG-SGPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             eEEEEC-ccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            799999 899999999865542 3678998987653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=80.46  E-value=1.3  Score=30.06  Aligned_cols=36  Identities=11%  Similarity=0.155  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~  187 (284)
                      .+.+++|+| +|.+|+=++..+..+ |.+|.++.+++.
T Consensus        31 ~~~~vvIiG-gG~iG~E~A~~l~~~-g~~Vtlv~~~~~   66 (122)
T d1xhca2          31 NSGEAIIIG-GGFIGLELAGNLAEA-GYHVKLIHRGAM   66 (122)
T ss_dssp             HHSEEEEEE-CSHHHHHHHHHHHHT-TCEEEEECSSSC
T ss_pred             cCCcEEEEC-CcHHHHHHHHHhhcc-cceEEEEecccc
Confidence            457899999 899999988888885 999999987543

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=80.43  E-value=4.1  Score=32.92  Aligned_cols=97  Identities=11%  Similarity=0.120  Sum_probs=60.7

Q ss_pred             hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHH-HHcCC---cEEeeCCCcccccCCCcccEEE
Q 023273          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGA---DLAIDYTKENIEDLPEKFDVVF  219 (284)
Q Consensus       145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~-~~~g~---~~~~~~~~~~~~~~~~~~d~vi  219 (284)
                      ....+...++.|+| +|..+.+-++.....++. +|.+.++++++.+.+ +++..   ..+..  .++..+.-++.|+++
T Consensus       122 ~LA~~da~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~--~~s~~eav~~ADIi~  198 (340)
T d1x7da_         122 ALARPNARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRR--ASSVAEAVKGVDIIT  198 (340)
T ss_dssp             HHSCTTCCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEE--CSSHHHHHTTCSEEE
T ss_pred             HhhccCCceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCcee--cCCHHHHHhcCCcee
Confidence            33345667999999 899998877766655564 677888887766544 33321   11111  122333356889998


Q ss_pred             eCCCC----cHHHHHhhccCCEEEEEcCC
Q 023273          220 DAVGQ----CDKALKAVKEGGRVVSIIGS  244 (284)
Q Consensus       220 d~~g~----~~~~~~~l~~~G~~v~~g~~  244 (284)
                      -|+.+    +-.--+.++++-.+..+|..
T Consensus       199 t~Tas~s~~Pv~~~~~l~pG~hI~aiGs~  227 (340)
T d1x7da_         199 TVTADKAYATIITPDMLEPGMHLNAVGGD  227 (340)
T ss_dssp             ECCCCSSEEEEECGGGCCTTCEEEECSCC
T ss_pred             eccccCCCCcccchhhcCCCCEEeecccc
Confidence            87753    22233578888888777764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=80.27  E-value=0.86  Score=32.86  Aligned_cols=33  Identities=18%  Similarity=0.200  Sum_probs=25.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (284)
Q Consensus       150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~  184 (284)
                      .+++|+|+| +|.+|+-++..++.+ +.++.++..
T Consensus         2 ~~~~VvIIG-gG~~G~e~A~~l~~~-g~~v~v~~~   34 (185)
T d1q1ra1           2 ANDNVVIVG-TGLAGVEVAFGLRAS-GWEGNIRLV   34 (185)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHT-TCCSEEEEE
T ss_pred             CCCCEEEEC-CcHHHHHHHHHHHHc-CCceEEEEe
Confidence            578999999 899999988888885 766555443

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.24  E-value=0.71  Score=34.85  Aligned_cols=34  Identities=9%  Similarity=0.014  Sum_probs=27.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHhcC-------CeEEEEeCChh
Q 023273          152 KSILVLGGAGGVGTMVIQLAKHVFG-------ASKVAATSSTA  187 (284)
Q Consensus       152 ~~vlI~ga~g~~G~~a~~~a~~~~g-------~~vi~~~~~~~  187 (284)
                      -+|+|+| +|+.|++|+..+... |       .+|.+.+..+.
T Consensus         3 ~~VaVIG-aGpaGL~aA~~L~~~-G~~~~~~~~~V~v~E~~~~   43 (239)
T d1lqta2           3 YYIAIVG-SGPSAFFAAASLLKA-ADTTEDLDMAVDMLEMLPT   43 (239)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHH-HHHSTTCCEEEEEEESSSS
T ss_pred             cEEEEEC-cCHHHHHHHHHHHHc-CCccccCCCceEEEecCCC
Confidence            4799999 899999999877764 4       57888887543

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.21  E-value=0.94  Score=34.26  Aligned_cols=91  Identities=16%  Similarity=0.207  Sum_probs=54.7

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHH----HcCCcE---EeeCCC-cccccC-----C
Q 023273          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGADL---AIDYTK-ENIEDL-----P  212 (284)
Q Consensus       147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~----~~g~~~---~~~~~~-~~~~~~-----~  212 (284)
                      +....++||-+|  +..|..++.+|+++. +.+++.++.+++..+.++    ..|...   ++.-+. +.++..     .
T Consensus        53 ~~~kpk~ILEiG--t~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~l~~l~~~~~~  130 (214)
T d2cl5a1          53 REYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDV  130 (214)
T ss_dssp             HHHCCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGHHHHSCC
T ss_pred             HhhCCCEEEEEc--cCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccccccccchhhcccc
Confidence            344557999998  456777778887642 579999999988777664    345321   222111 112221     2


Q ss_pred             CcccEEE-eCCCC-------cHHHHHhhccCCEEE
Q 023273          213 EKFDVVF-DAVGQ-------CDKALKAVKEGGRVV  239 (284)
Q Consensus       213 ~~~d~vi-d~~g~-------~~~~~~~l~~~G~~v  239 (284)
                      ..+|++| |...+       +...+++|+++|.++
T Consensus       131 ~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv  165 (214)
T d2cl5a1         131 DTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLL  165 (214)
T ss_dssp             CCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEE
T ss_pred             cccceeeecccccccccHHHHHHHhCccCCCcEEE
Confidence            4689765 54332       134556789988654