Citrus Sinensis ID: 023280

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280----
MTNKHISNGRWLSDFSADFVDKFLREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
cccccccccccccccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccEEEEEEcccccccccccccccccEEEEEccccccccccccccccHHHHHHHHHHHcccccEEEEcccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccEEEEEEEEEEccEEEEEEcccccccccccc
cccccccccccEccccccccccccHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccEEEEEEccccccHHHHcccccccEEEEEEHHHccccccccccHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccEEEEEEEEccccEEEEEEEEEEEEEEEcc
mtnkhisngrwlsdfsADFVDKFLREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAqlqtpsdtkafdSVERIKEGFIHFkrekyeknpALYSELakgqspkymvfacsdsrvcpshvldfqpgeafvvrnvanivppydqtkyagVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMsftfdgnnstdfIEDWVKIgipakskvltehgdkpfgdqctycekeAVNVSlsnlltypfvreGLVNKTLALKGGYYDFVNGSFElwgldfslspplsv
mtnkhisngrwlsdfsADFVDKFLREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEqitaqlqtpsdtkafdsVERIKEGfihfkrekyekNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLdfslspplsv
MTNKHISNGRWLSDFSADFVDKFLREDMANQSYeeaiealkkllkekedlkPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKyagvgaaveyavLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
*********RWLSDFSADFVDKFLREDM*******AIEAL***********************************SVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFS*******
**************FSADFVDKFL******************************************************RIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHG*KPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLS*
********GRWLSDFSADFVDKFLREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
*****ISNGRWLSDFSADFVDKFLREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MTNKHISNGRWLSDFSADFVDKFLRxxxxxxxxxxxxxxxxxxxxxxxxxKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query284 2.2.26 [Sep-21-2011]
P27141321 Carbonic anhydrase, chlor N/A no 0.936 0.828 0.763 1e-120
P27140347 Carbonic anhydrase, chlor yes no 0.943 0.772 0.774 1e-119
P17067328 Carbonic anhydrase, chlor N/A no 0.943 0.817 0.75 1e-118
P42737259 Carbonic anhydrase 2, chl no no 0.904 0.992 0.787 1e-117
P16016319 Carbonic anhydrase, chlor N/A no 0.933 0.830 0.731 1e-111
P46511330 Carbonic anhydrase OS=Fla N/A no 0.897 0.772 0.745 1e-111
P46512330 Carbonic anhydrase 1 OS=F N/A no 0.897 0.772 0.745 1e-111
P46510330 Carbonic anhydrase OS=Fla N/A no 0.897 0.772 0.745 1e-110
P46281329 Carbonic anhydrase OS=Fla N/A no 0.897 0.775 0.741 1e-110
P46513190 Carbonic anhydrase 2 (Fra N/A no 0.661 0.989 0.739 8e-81
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function desciption
 Score =  431 bits (1108), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 203/266 (76%), Positives = 231/266 (86%)

Query: 19  FVDKFLREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVE 78
            ++  LRE+MA +SYE+AI AL+KLL EK +L P+AAA+V+QITA+LQ+   +K FD VE
Sbjct: 56  IINPILREEMAKESYEQAIAALEKLLSEKGELGPIAAARVDQITAELQSSDGSKPFDPVE 115

Query: 79  RIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRN 138
            +K GFIHFK EKYEKNPALY EL+KGQSPK+MVFACSDSRVCPSHVL+FQPGEAFVVRN
Sbjct: 116 HMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRN 175

Query: 139 VANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFI 198
           +AN+VP YD+T+Y+GVGAA+EYAVLHLKV NIVVIGHSACGGIKGLMS   DG+ ST FI
Sbjct: 176 IANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFI 235

Query: 199 EDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALK 258
           EDWVKIG+PAK+KV  EH DK F DQCT CEKEAVNVSL NLLTYPFVREGLV KTLALK
Sbjct: 236 EDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALK 295

Query: 259 GGYYDFVNGSFELWGLDFSLSPPLSV 284
           GG+YDFVNG FELWGL+F LSP LSV
Sbjct: 296 GGHYDFVNGGFELWGLEFGLSPSLSV 321
Reversible hydration of carbon dioxide.
Nicotiana tabacum (taxid: 4097)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 1
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2 Back     alignment and function description
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1 Back     alignment and function description
>sp|P42737|CAH2_ARATH Carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2 Back     alignment and function description
>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2 Back     alignment and function description
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1 Back     alignment and function description
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1 Back     alignment and function description
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2 Back     alignment and function description
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1 Back     alignment and function description
>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query284
339958979321 chloroplast carbonic anhydrase [Dimocarp 0.943 0.834 0.835 1e-131
255567325326 carbonic anhydrase, putative [Ricinus co 0.943 0.822 0.769 1e-120
118489443321 unknown [Populus trichocarpa x Populus d 0.915 0.809 0.797 1e-119
3061271322 NPCA1 [Nicotiana paniculata] 0.936 0.826 0.763 1e-119
112292669324 chloroplast carbonic anhydrase [Pachysan 0.940 0.824 0.772 1e-119
224055529332 predicted protein [Populus trichocarpa] 0.915 0.783 0.797 1e-118
115473321 RecName: Full=Carbonic anhydrase, chloro 0.936 0.828 0.763 1e-118
20502881326 carbonic anhydrase [Gossypium hirsutum] 0.915 0.797 0.793 1e-118
118489058258 unknown [Populus trichocarpa x Populus d 0.897 0.988 0.809 1e-118
312281625342 unnamed protein product [Thellungiella h 0.943 0.783 0.770 1e-118
>gi|339958979|gb|AEK25173.1| chloroplast carbonic anhydrase [Dimocarpus longan] Back     alignment and taxonomy information
 Score =  472 bits (1214), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 224/268 (83%), Positives = 242/268 (90%)

Query: 17  ADFVDKFLREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDS 76
           A  ++   REDMAN+SYEEAIEALKKLL EK++LKPVAAAKVEQITAQLQT +D K FD+
Sbjct: 54  APIINPTWREDMANKSYEEAIEALKKLLSEKDELKPVAAAKVEQITAQLQTTADGKPFDA 113

Query: 77  VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVV 136
           VER+K+GFIHFKREKYEKNPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVV
Sbjct: 114 VERMKDGFIHFKREKYEKNPALYGELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVV 173

Query: 137 RNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTD 196
           RNVANIVPPYDQ KYAGVGAAVEYAVLHLKV  IVVIGHSACGGIKGLMSFTF+G NSTD
Sbjct: 174 RNVANIVPPYDQIKYAGVGAAVEYAVLHLKVQEIVVIGHSACGGIKGLMSFTFEGANSTD 233

Query: 197 FIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLA 256
           FIEDWVKIG+PAK  VL EHG  PF  QCTYCEK AV+VS+ NLL+YPFVR+GLV KTLA
Sbjct: 234 FIEDWVKIGLPAKGSVLAEHGGVPFEQQCTYCEKAAVSVSIGNLLSYPFVRDGLVKKTLA 293

Query: 257 LKGGYYDFVNGSFELWGLDFSLSPPLSV 284
           LKGGYYDFVNGSFELW ++F LSPPLSV
Sbjct: 294 LKGGYYDFVNGSFELWSVEFGLSPPLSV 321

Source: Dimocarpus longan

Species: Dimocarpus longan

Genus: Dimocarpus

Family: Sapindaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255567325|ref|XP_002524642.1| carbonic anhydrase, putative [Ricinus communis] gi|223536003|gb|EEF37661.1| carbonic anhydrase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|118489443|gb|ABK96524.1| unknown [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|3061271|dbj|BAA25639.1| NPCA1 [Nicotiana paniculata] Back     alignment and taxonomy information
>gi|112292669|gb|ABI14813.1| chloroplast carbonic anhydrase [Pachysandra terminalis] Back     alignment and taxonomy information
>gi|224055529|ref|XP_002298524.1| predicted protein [Populus trichocarpa] gi|222845782|gb|EEE83329.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|115473|sp|P27141.1|CAHC_TOBAC RecName: Full=Carbonic anhydrase, chloroplastic; AltName: Full=Carbonate dehydratase; Flags: Precursor gi|170219|gb|AAA34065.1| chloroplast carbonic anhydrase [Nicotiana tabacum] gi|445610|prf||1909357A carbonic anhydrase Back     alignment and taxonomy information
>gi|20502881|gb|AAM22683.1|AF482951_1 carbonic anhydrase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|118489058|gb|ABK96336.1| unknown [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|312281625|dbj|BAJ33678.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query284
TAIR|locus:2084198347 CA1 "carbonic anhydrase 1" [Ar 0.943 0.772 0.681 1.6e-93
TAIR|locus:2185460331 CA2 "carbonic anhydrase 2" [Ar 0.904 0.776 0.687 2.1e-91
TAIR|locus:2016109280 BCA4 "beta carbonic anhydrase 0.897 0.910 0.540 2e-72
TAIR|locus:2034797258 BCA3 "beta carbonic anhydrase 0.901 0.992 0.511 5.6e-68
TAIR|locus:2134218302 BCA5 "beta carbonic anhydrase 0.725 0.682 0.438 3.5e-43
TAIR|locus:2196292290 BCA6 "beta carbonic anhydrase 0.732 0.717 0.395 8e-37
TIGR_CMR|GSU_2307211 GSU_2307 "carbonic anhydrase" 0.669 0.900 0.385 2.6e-31
TIGR_CMR|CBU_0139206 CBU_0139 "carbonic anhydrase" 0.654 0.902 0.343 3.6e-25
UNIPROTKB|P0ABE9219 cynT "carbonic anhydrase monom 0.651 0.844 0.343 1.8e-23
TIGR_CMR|CJE_0288211 CJE_0288 "carbonic anhydrase" 0.686 0.924 0.341 1.8e-23
TAIR|locus:2084198 CA1 "carbonic anhydrase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
 Identities = 184/270 (68%), Positives = 203/270 (75%)

Query:    17 ADFVDKFLREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQT--PSDTKAF 74
             A  +  +  E+M  ++Y                   VAAAKVEQITA LQT   SD KAF
Sbjct:    67 APIIAPYWSEEMGTEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTSSDKKAF 126

Query:    75 DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAF 134
             D VE IK+GFI FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDFQPG+AF
Sbjct:   127 DPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAF 186

Query:   135 VVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNS 194
             VVRN+AN+VPP+D+ K            LHLKV NIVVIGHSACGGIKGLMSF  DGNNS
Sbjct:   187 VVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNS 246

Query:   195 TDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKT 254
             TDFIEDWVKI +PAKSKV++E GD  F DQC  CE+EAVNVSL+NLLTYPFVREGLV  T
Sbjct:   247 TDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGT 306

Query:   255 LALKGGYYDFVNGSFELWGLDFSLSPPLSV 284
             LALKGGYYDFV G+FELWGL+F LS   SV
Sbjct:   307 LALKGGYYDFVKGAFELWGLEFGLSETSSV 336
GO:0004089 "carbonate dehydratase activity" evidence=IEA;ISS
GO:0008270 "zinc ion binding" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0015976 "carbon utilization" evidence=IEA;ISS
GO:0009579 "thylakoid" evidence=IDA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009535 "chloroplast thylakoid membrane" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009409 "response to cold" evidence=IEP;RCA
GO:0010319 "stromule" evidence=IDA
GO:0042742 "defense response to bacterium" evidence=IEP;RCA
GO:0016020 "membrane" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0009817 "defense response to fungus, incompatible interaction" evidence=IDA
GO:0010037 "response to carbon dioxide" evidence=IGI
GO:0010119 "regulation of stomatal movement" evidence=IGI
GO:0000165 "MAPK cascade" evidence=RCA
GO:0006098 "pentose-phosphate shunt" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0009595 "detection of biotic stimulus" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009814 "defense response, incompatible interaction" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0019684 "photosynthesis, light reaction" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0043900 "regulation of multi-organism process" evidence=RCA
GO:0050832 "defense response to fungus" evidence=RCA
TAIR|locus:2185460 CA2 "carbonic anhydrase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016109 BCA4 "beta carbonic anhydrase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034797 BCA3 "beta carbonic anhydrase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134218 BCA5 "beta carbonic anhydrase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196292 BCA6 "beta carbonic anhydrase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2307 GSU_2307 "carbonic anhydrase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0139 CBU_0139 "carbonic anhydrase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
UNIPROTKB|P0ABE9 cynT "carbonic anhydrase monomer" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_0288 CJE_0288 "carbonic anhydrase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P16016CAHC_SPIOL4, ., 2, ., 1, ., 10.73130.93300.8307N/Ano
P42737CAH2_ARATH4, ., 2, ., 1, ., 10.78760.90490.9922nono
P46512CAH1_FLALI4, ., 2, ., 1, ., 10.74500.89780.7727N/Ano
P46513CAH2_FLALI4, ., 2, ., 1, ., 10.73930.66190.9894N/Ano
P46510CAHX_FLABI4, ., 2, ., 1, ., 10.74500.89780.7727N/Ano
P46511CAHX_FLABR4, ., 2, ., 1, ., 10.74500.89780.7727N/Ano
P17067CAHC_PEA4, ., 2, ., 1, ., 10.750.94360.8170N/Ano
P46281CAHX_FLAPR4, ., 2, ., 1, ., 10.74110.89780.7750N/Ano
P27140CAHC_ARATH4, ., 2, ., 1, ., 10.77400.94360.7723yesno
P27141CAHC_TOBAC4, ., 2, ., 1, ., 10.76310.93660.8286N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.2.10.983
4th Layer4.2.1.10.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_I2426
hypothetical protein (333 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_fgenesh4_pm.C_LG_X0128
hypothetical protein (162 aa)
     •  0.899
gw1.X.878.1
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (953 aa)
      • 0.510
estExt_fgenesh4_pg.C_LG_IX1158
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (853 aa)
      • 0.510
estExt_Genewise1_v1.C_LG_IV2986
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (819 aa)
      • 0.510
estExt_Genewise1_v1.C_LG_IV0101
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (950 aa)
      • 0.510

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query284
PLN03014347 PLN03014, PLN03014, carbonic anhydrase 1e-151
PLN03019330 PLN03019, PLN03019, carbonic anhydrase 1e-140
PLN00416258 PLN00416, PLN00416, carbonate dehydratase 1e-125
cd00884190 cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) 1e-103
PLN03006301 PLN03006, PLN03006, carbonate dehydratase 2e-60
smart00947154 smart00947, Pro_CA, Carbonic anhydrase 3e-58
pfam00484149 pfam00484, Pro_CA, Carbonic anhydrase 2e-53
PLN02154290 PLN02154, PLN02154, carbonic anhydrase 4e-53
COG0288207 COG0288, CynT, Carbonic anhydrase [Inorganic ion t 2e-47
cd00382119 cd00382, beta_CA, Carbonic anhydrases (CA) are zin 7e-46
cd00883182 cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) 3e-35
cd03378154 cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) 4e-24
PRK10437220 PRK10437, PRK10437, carbonic anhydrase; Provisiona 1e-17
cd03379142 cd03379, beta_CA_cladeD, Carbonic anhydrases (CA) 1e-08
PRK15219245 PRK15219, PRK15219, carbonic anhydrase; Provisiona 4e-07
>gnl|CDD|178588 PLN03014, PLN03014, carbonic anhydrase Back     alignment and domain information 
 Score =  426 bits (1096), Expect = e-151
 Identities = 209/270 (77%), Positives = 231/270 (85%), Gaps = 2/270 (0%)

Query: 17  ADFVDKFLREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQT--PSDTKAF 74
           A  +  +  E+M  ++Y+EAIEALKKLL EKE+LK VAAAKVEQITA LQT   SD KAF
Sbjct: 67  APIIAPYWSEEMGTEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTSSDKKAF 126

Query: 75  DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAF 134
           D VE IK+GFI FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDFQPG+AF
Sbjct: 127 DPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAF 186

Query: 135 VVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNS 194
           VVRN+AN+VPP+D+ KY GVGAA+EYAVLHLKV NIVVIGHSACGGIKGLMSF  DGNNS
Sbjct: 187 VVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNS 246

Query: 195 TDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKT 254
           TDFIEDWVKI +PAKSKV++E GD  F DQC  CE+EAVNVSL+NLLTYPFVREGLV  T
Sbjct: 247 TDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGT 306

Query: 255 LALKGGYYDFVNGSFELWGLDFSLSPPLSV 284
           LALKGGYYDFV G+FELWGL+F LS   SV
Sbjct: 307 LALKGGYYDFVKGAFELWGLEFGLSETSSV 336

Length = 347
>gnl|CDD|166660 PLN03019, PLN03019, carbonic anhydrase Back     alignment and domain information
>gnl|CDD|177809 PLN00416, PLN00416, carbonate dehydratase Back     alignment and domain information
>gnl|CDD|238449 cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|178583 PLN03006, PLN03006, carbonate dehydratase Back     alignment and domain information
>gnl|CDD|214929 smart00947, Pro_CA, Carbonic anhydrase Back     alignment and domain information
>gnl|CDD|215941 pfam00484, Pro_CA, Carbonic anhydrase Back     alignment and domain information
>gnl|CDD|215111 PLN02154, PLN02154, carbonic anhydrase Back     alignment and domain information
>gnl|CDD|223365 COG0288, CynT, Carbonic anhydrase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|238224 cd00382, beta_CA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|238448 cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|239473 cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|182460 PRK10437, PRK10437, carbonic anhydrase; Provisional Back     alignment and domain information
>gnl|CDD|239474 cd03379, beta_CA_cladeD, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|237927 PRK15219, PRK15219, carbonic anhydrase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 284
PLN03014347 carbonic anhydrase 100.0
PLN03019330 carbonic anhydrase 100.0
PLN00416258 carbonate dehydratase 100.0
PLN03006301 carbonate dehydratase 100.0
cd00884190 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-c 100.0
PLN02154290 carbonic anhydrase 100.0
PRK10437220 carbonic anhydrase; Provisional 100.0
cd00883182 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-c 100.0
COG0288207 CynT Carbonic anhydrase [Inorganic ion transport a 100.0
PRK15219245 carbonic anhydrase; Provisional 100.0
KOG1578276 consensus Predicted carbonic anhydrase involved in 100.0
cd03378154 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-c 100.0
PF00484153 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Ca 100.0
cd00382119 beta_CA Carbonic anhydrases (CA) are zinc-containi 100.0
cd03379142 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-c 100.0
KOG1578276 consensus Predicted carbonic anhydrase involved in 98.38
>PLN03014 carbonic anhydrase Back     alignment and domain information 
Probab=100.00  E-value=2.6e-78  Score=566.97  Aligned_cols=268  Identities=78%  Similarity=1.239  Sum_probs=248.0

Q ss_pred             ccccCchhHHHhhhhhHHHHHHHHHHHHhhhcCchhhHhHhHHHHHHHhcCC--CCCChHHHHHHHHHHHHHHHhhhccC
Q 023280           17 ADFVDKFLREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTP--SDTKAFDSVERIKEGFIHFKREKYEK   94 (284)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~p~~~l~~Ll~GN~~F~~~~~~~   94 (284)
                      +|||||+|++||+++|||+||++|+|||+||++|+.+|++||+++|++|++.  ..+.+++++++|++||++|+++.+.+
T Consensus        67 ~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lerL~~GN~rF~~~~~~~  146 (347)
T PLN03014         67 APIIAPYWSEEMGTEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTSSDKKAFDPVETIKQGFIKFKKEKYET  146 (347)
T ss_pred             CcccCchhHhhhchhhHHHHHHHHHhhcccccccchHHHHhHHHHHHHHhcccCCCCCCcCHHHHHHHHHHHHHhhcccc
Confidence            5999999999999999999999999999999999999999999999999963  23678999999999999999999999


Q ss_pred             ChhhHHhhhcCCCCcEEEEeecCCCCChhhhcCCCCCceEEEEcccccCCCCCCccchhhHHHHHHHHHhcCcceEEEec
Q 023280           95 NPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIG  174 (284)
Q Consensus        95 ~p~~~~~La~gQ~P~~lvitCsDSRV~pe~i~~~~pGE~FVvRNaGN~V~~~d~~~~~~~~asLEyAv~~L~V~~IVV~G  174 (284)
                      ++++|+++++||+|+++||+||||||+|+.+||++|||+||+||+||+|+++|...|++++++|||||.+|+|++|||||
T Consensus       147 ~~~~~~~La~GQ~P~alvI~CsDSRV~Pe~Ifd~~pGDlFVvRNaGNiV~~~d~~~~~~v~asLEYAV~~L~V~~IVV~G  226 (347)
T PLN03014        147 NPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIG  226 (347)
T ss_pred             CHHHHHhhccCCCCCEEEEEeccCCCCHHHHhCCCCCcEEEEeccccccCcccccccccchhHHHHHHHHhCCCEEEEeC
Confidence            99999999999999999999999999999999999999999999999999987655667889999999999999999999


Q ss_pred             cCCCCccccccccccCCCCCchhHHHHHHhccchhhhhhhhcCCCCcccccchHHHHHHHHHHHHhhcChhHHhhhhCCc
Q 023280          175 HSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKT  254 (284)
Q Consensus       175 Hs~CGav~a~~~~~~~g~~~~~~i~~wl~~~~pa~~~~~~~~~~~~~~~~~~~~~~~nV~~qv~~L~~~p~v~~~v~~g~  254 (284)
                      ||+||||+|+++...++....++|++|+..+.|++.++..+.+..++.+++..|+++||++||++|++||+|++++++|+
T Consensus       227 Hs~CGaV~Aa~~~~~~g~~~~~~I~~wl~~i~pA~~~v~~~~~~~~~~d~~~~~ekeNV~~qV~nL~t~P~V~eav~~G~  306 (347)
T PLN03014        227 HSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGT  306 (347)
T ss_pred             CCCchHHHHHHhccccccccchhHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCC
Confidence            99999999998765445455789999999999998876665555566777777889999999999999999999999999


Q ss_pred             eEEEEEEEEccCCeEEEEeccCCCCCCCCC
Q 023280          255 LALKGGYYDFVNGSFELWGLDFSLSPPLSV  284 (284)
Q Consensus       255 L~V~G~~YDi~tG~v~~~~~~~~~~~~~~~  284 (284)
                      |.||||+||+.||+|++|+.++++||+.++
T Consensus       307 L~I~G~~YDi~TG~V~~l~~~~~~~~~~~~  336 (347)
T PLN03014        307 LALKGGYYDFVKGAFELWGLEFGLSETSSV  336 (347)
T ss_pred             cEEEEEEEECCCceEEEeccccccCCcccc
Confidence            999999999999999999999999999875

>PLN03019 carbonic anhydrase Back     alignment and domain information
>PLN00416 carbonate dehydratase Back     alignment and domain information
>PLN03006 carbonate dehydratase Back     alignment and domain information
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>PLN02154 carbonic anhydrase Back     alignment and domain information
>PRK10437 carbonic anhydrase; Provisional Back     alignment and domain information
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK15219 carbonic anhydrase; Provisional Back     alignment and domain information
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4 Back     alignment and domain information
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query284
1ekj_A221 The X-Ray Crystallographic Structure Of Beta Carbon 3e-96
1ddz_A 496 X-Ray Structure Of A Beta-Carbonic Anhydrase From T 4e-14
3qy1_A223 1.54a Resolution Crystal Structure Of A Beta-Carbon 3e-13
3e3g_A229 H. Influenzae Beta-Carbonic Anhydrase, Variant G41a 3e-13
3e24_A229 H. Influenzae Beta-Carbonic Anhydrase, Variant W39f 8e-13
3e28_A229 H. Influenzae Beta-carbonic Anhydrase, Variant Y181 1e-12
2w3n_A239 Structure And Inhibition Of The Co2-Sensing Carboni 1e-12
2a8c_A229 Haemophilus Influenzae Beta-Carbonic Anhydrase Leng 1e-12
2w3q_A243 Structure And Inhibition Of The Co2-Sensing Carboni 1e-12
3mf3_A221 Cobalt(Ii)-Substituted Haemophilus Influenzae B-Car 1e-12
3e2x_A229 H. Influenzae Beta-Carbonic Anhydrase, Variant V47a 3e-12
3e1v_A229 H. Influenzae Beta-Carbonic Anhydrase, Variant D44n 4e-12
1i6o_A220 Crystal Structure Of E. Coli Beta Carbonic Anhydras 4e-12
1i6p_A220 Crystal Structure Of E. Coli Beta Carbonic Anhydras 4e-12
3ucj_A227 Coccomyxa Beta-Carbonic Anhydrase In Complex With A 7e-12
3eyx_A216 Crystal Structure Of Carbonic Anhydrase Nce103 From 3e-09
2a5v_A213 Crystal Structure Of M. Tuberculosis Beta Carbonic 6e-08
1ym3_A215 Crystal Structure Of Carbonic Anhydrase Rv3588c Fro 6e-08
>pdb|1EKJ|A Chain A, The X-Ray Crystallographic Structure Of Beta Carbonic Anhydrase From The C3 Dicot Pisum Sativum Length = 221 Back     alignment and structure 
Iteration: 1

 Score =  348 bits (892), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 163/210 (77%), Positives = 178/210 (84%)
Query: 75  DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAF 134
           ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +MVFACSDSRVCPSHVLDFQPGEAF
Sbjct: 12  EASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAF 71
Query: 135 VVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNS 194
           VVRNVAN+VPPYDQ K            LHLKVSNIVVIGHSACGGIKGL+SF FDG  S
Sbjct: 72  VVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYS 131
Query: 195 TDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKT 254
           TDFIE+WVKIG+PAK+KV  +HGD PF + CT+CEKEAVN SL NLLTYPFVREGLVNKT
Sbjct: 132 TDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKT 191
Query: 255 LALKGGYYDFVNGSFELWGLDFSLSPPLSV 284
           LALKGGYYDFV GSFELWGL+F LS   SV
Sbjct: 192 LALKGGYYDFVKGSFELWGLEFGLSSTFSV 221
>pdb|1DDZ|A Chain A, X-Ray Structure Of A Beta-Carbonic Anhydrase From The Red Alga, Porphyridium Purpureum R-1 Length = 496 Back     alignment and structure
>pdb|3QY1|A Chain A, 1.54a Resolution Crystal Structure Of A Beta-Carbonic Anhydrase From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 Length = 223 Back     alignment and structure
>pdb|3E3G|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a Length = 229 Back     alignment and structure
>pdb|3E24|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant W39f Length = 229 Back     alignment and structure
>pdb|3E28|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f Length = 229 Back     alignment and structure
>pdb|2W3N|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic Anhydrase Can2 From The Pathogenic Fungus Cryptococcus Neoformans Length = 239 Back     alignment and structure
>pdb|2A8C|A Chain A, Haemophilus Influenzae Beta-Carbonic Anhydrase Length = 229 Back     alignment and structure
>pdb|2W3Q|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic Anhydrase Can2 From The Pathogenic Fungus Cryptococcus Neoformans Length = 243 Back     alignment and structure
>pdb|3MF3|A Chain A, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic Anhydrase Length = 221 Back     alignment and structure
>pdb|3E2X|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a Length = 229 Back     alignment and structure
>pdb|3E1V|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant D44n Length = 229 Back     alignment and structure
>pdb|1I6O|A Chain A, Crystal Structure Of E. Coli Beta Carbonic Anhydrase (Ecca) Length = 220 Back     alignment and structure
>pdb|1I6P|A Chain A, Crystal Structure Of E. Coli Beta Carbonic Anhydrase (Ecca) Length = 220 Back     alignment and structure
>pdb|3UCJ|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With Acetazolamide Length = 227 Back     alignment and structure
>pdb|3EYX|A Chain A, Crystal Structure Of Carbonic Anhydrase Nce103 From Saccharomyces Cerevisiae Length = 216 Back     alignment and structure
>pdb|2A5V|A Chain A, Crystal Structure Of M. Tuberculosis Beta Carbonic Anhydrase, Rv3588c, Tetrameric Form Length = 213 Back     alignment and structure
>pdb|1YM3|A Chain A, Crystal Structure Of Carbonic Anhydrase Rv3588c From Mycobacterium Tuberculosis Length = 215 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query284
1ekj_A221 Beta-carbonic anhydrase; rossman fold domain, stra 1e-102
3qy1_A223 Carbonic anhydrase; structural genomics, center fo 4e-83
3eyx_A216 Carbonic anhydrase; rossmann fold, cytoplasm, lyas 2e-81
2w3q_A243 Carbonic anhydrase 2; lyase, inhibition, sulfonami 4e-81
3ucj_A227 Carbonic anhydrase; alpha/beta, strand exchange, l 9e-81
3e3i_A229 Carbonic anhydrase 2, beta carbonic anhydrase; all 6e-80
1ddz_A 496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 3e-77
1ddz_A496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 1e-75
1ym3_A215 Carbonic anhydrase (carbonate dehydratase) (carbo 5e-69
1g5c_A170 Beta-carbonic anhydrase; zinc, hepes, lyase; HET: 3e-37
3teo_A204 Carbon disulfide hydrolase; beta carbonic anhydras 2e-32
1ylk_A172 Hypothetical protein RV1284/MT1322; homodimer, alp 1e-29
3las_A166 Putative carbonic anhydrase; zinc binding, LYAS; H 4e-28
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1 Length = 221 Back     alignment and structure
 Score =  297 bits (761), Expect = e-102
 Identities = 173/218 (79%), Positives = 190/218 (87%)

Query: 67  TPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVL 126
           +       ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +MVFACSDSRVCPSHVL
Sbjct: 4   SSDGIPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVL 63

Query: 127 DFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMS 186
           DFQPGEAFVVRNVAN+VPPYDQ KYAG GAA+EYAVLHLKVSNIVVIGHSACGGIKGL+S
Sbjct: 64  DFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLS 123

Query: 187 FTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFV 246
           F FDG  STDFIE+WVKIG+PAK+KV  +HGD PF + CT+CEKEAVN SL NLLTYPFV
Sbjct: 124 FPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFV 183

Query: 247 REGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 284
           REGLVNKTLALKGGYYDFV GSFELWGL+F LS   SV
Sbjct: 184 REGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV 221
>3qy1_A Carbonic anhydrase; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 1.54A {Salmonella enterica subsp} PDB: 1i6p_A 1i6o_A 1t75_A 2esf_A Length = 223 Back     alignment and structure
>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding, nucleus, zinc; 2.04A {Saccharomyces cerevisiae} Length = 216 Back     alignment and structure
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A Length = 243 Back     alignment and structure
>3ucj_A Carbonic anhydrase; alpha/beta, strand exchange, lyase-lyase inhibitor complex; HET: AZM; 1.85A {Coccomyxa SP} PDB: 3uck_A 3ucm_A 3ucn_A 3uco_A Length = 227 Back     alignment and structure
>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, META; 2.00A {Haemophilus influenzae} PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A 3mf3_A Length = 229 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Length = 496 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Length = 496 Back     alignment and structure
>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbo dehydratase); Zn protein, structural proteomics in europe, spine, structur genomics; 1.75A {Mycobacterium tuberculosis} PDB: 2a5v_A Length = 215 Back     alignment and structure
>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} SCOP: c.53.2.1 Length = 170 Back     alignment and structure
>3teo_A Carbon disulfide hydrolase; beta carbonic anhydrase fold, carbon disulfide hydrolysis; HET: PE3; 2.40A {Acidianus SP} PDB: 3ten_A* Length = 204 Back     alignment and structure
>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in spine, structural genomics, unknown function; 2.00A {Mycobacterium tuberculosis} Length = 172 Back     alignment and structure
>3las_A Putative carbonic anhydrase; zinc binding, LYAS; HET: GOL; 1.40A {Streptococcus mutans} Length = 166 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query284
1ekj_A221 Beta-carbonic anhydrase; rossman fold domain, stra 100.0
3qy1_A223 Carbonic anhydrase; structural genomics, center fo 100.0
1ym3_A215 Carbonic anhydrase (carbonate dehydratase) (carbo 100.0
3e3i_A229 Carbonic anhydrase 2, beta carbonic anhydrase; all 100.0
2w3q_A243 Carbonic anhydrase 2; lyase, inhibition, sulfonami 100.0
3eyx_A216 Carbonic anhydrase; rossmann fold, cytoplasm, lyas 100.0
3ucj_A227 Carbonic anhydrase; alpha/beta, strand exchange, l 100.0
1ddz_A 496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 100.0
1ddz_A496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 100.0
1ylk_A172 Hypothetical protein RV1284/MT1322; homodimer, alp 100.0
3las_A166 Putative carbonic anhydrase; zinc binding, LYAS; H 100.0
1g5c_A170 Beta-carbonic anhydrase; zinc, hepes, lyase; HET: 100.0
3teo_A204 Carbon disulfide hydrolase; beta carbonic anhydras 100.0
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1 Back     alignment and structure
Probab=100.00  E-value=2.1e-62  Score=439.22  Aligned_cols=215  Identities=80%  Similarity=1.342  Sum_probs=190.0

Q ss_pred             CCChHHHHHHHHHHHHHHHhhhccCChhhHHhhhcCCCCcEEEEeecCCCCChhhhcCCCCCceEEEEcccccCCCCCCc
Q 023280           70 DTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQT  149 (284)
Q Consensus        70 ~~~p~~~l~~Ll~GN~~F~~~~~~~~p~~~~~La~gQ~P~~lvitCsDSRV~pe~i~~~~pGE~FVvRNaGN~V~~~d~~  149 (284)
                      .++|++++++|++||++|+++++..+|++|++|++||+|+++|||||||||+|+.+||++|||+||+|||||+|+++|.+
T Consensus         7 ~~~p~~~l~~L~~gN~~f~~~~~~~~~~~~~~La~gQ~P~~lvi~CsDSRV~pe~i~~~~pGdlFVvRNaGN~V~~~d~~   86 (221)
T 1ekj_A            7 GIPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQA   86 (221)
T ss_dssp             -----CHHHHHHHHHHHHHHHTTTSCHHHHHHHTTCCCCSEEEEEECCGGGCHHHHSCCCTTSEEEEEEGGGCCCCSCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHhcCcccCHHHHHhhccCCCCcEEEEEeCCCCCCHHHHhCCCCCcEEEEeccCcccCccccc
Confidence            37899999999999999999998889999999999999999999999999999999999999999999999999998866


Q ss_pred             cchhhHHHHHHHHHhcCcceEEEeccCCCCccccccccccCCCCCchhHHHHHHhccchhhhhhhhcCCCCcccccchHH
Q 023280          150 KYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCE  229 (284)
Q Consensus       150 ~~~~~~asLEyAv~~L~V~~IVV~GHs~CGav~a~~~~~~~g~~~~~~i~~wl~~~~pa~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      .++++++||||||.+|||++|||||||+|||++|+++....+....++++.|++.+.|+........+..++.+.+..++
T Consensus        87 ~~~~~~asleyAv~~L~v~~IvV~GHs~CGav~Aa~~~~~~~~~~~~~i~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (221)
T 1ekj_A           87 KYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCE  166 (221)
T ss_dssp             TCHHHHHHHHHHHHTSCCSEEEEEEESSCHHHHHHHHCCCSSCCCSSSHHHHHGGGHHHHHHHHHHSTTSCHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHhcCCCEEEEEccCCCCceeeecccccccccchHHHHHHHHhhhhHHHHHHhhccCCCHHHHHHHHH
Confidence            55678899999999999999999999999999999876554444567999999998888765555444444445556778


Q ss_pred             HHHHHHHHHHhhcChhHHhhhhCCceEEEEEEEEccCCeEEEEeccCCCCCCCCC
Q 023280          230 KEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV  284 (284)
Q Consensus       230 ~~nV~~qv~~L~~~p~v~~~v~~g~L~V~G~~YDi~tG~v~~~~~~~~~~~~~~~  284 (284)
                      ++||+.|+++|++||+|++++++|+|.||||+||+.||+|++++++.+.+|+++|
T Consensus       167 ~~nV~~~v~~L~~~p~v~~~~~~g~l~v~G~~ydi~tG~v~~~~~~~~~~~~~~~  221 (221)
T 1ekj_A          167 KEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV  221 (221)
T ss_dssp             HHHHHHHHHHHTTSHHHHHHHHTTSCEEEEEEEETTTTEEEEEEECCCCCCCCCC
T ss_pred             HHHHHHHHHHHHhCHHHHHHHHcCCcEEEEEEEECCCCeEEEEecCCCCCccccC
Confidence            8999999999999999999999999999999999999999999999999999986
>3qy1_A Carbonic anhydrase; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 1.54A {Salmonella enterica subsp} SCOP: c.53.2.1 PDB: 1i6p_A 1i6o_A 1t75_A 2esf_A Back     alignment and structure
>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbo dehydratase); Zn protein, structural proteomics in europe, spine, structur genomics; 1.75A {Mycobacterium tuberculosis} PDB: 2a5v_A Back     alignment and structure
>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, META; 2.00A {Haemophilus influenzae} SCOP: c.53.2.1 PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A 3mf3_A Back     alignment and structure
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A Back     alignment and structure
>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding, nucleus, zinc; 2.04A {Saccharomyces cerevisiae} Back     alignment and structure
>3ucj_A Carbonic anhydrase; alpha/beta, strand exchange, lyase-lyase inhibitor complex; HET: AZM; 1.85A {Coccomyxa SP} PDB: 3uck_A 3ucm_A 3ucn_A 3uco_A Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Back     alignment and structure
>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in spine, structural genomics, unknown function; 2.00A {Mycobacterium tuberculosis} Back     alignment and structure
>3las_A Putative carbonic anhydrase; zinc binding, LYAS; HET: GOL; 1.40A {Streptococcus mutans} SCOP: c.53.2.0 Back     alignment and structure
>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} SCOP: c.53.2.1 Back     alignment and structure
>3teo_A Carbon disulfide hydrolase; beta carbonic anhydrase fold, carbon disulfide hydrolysis; HET: PE3; 2.40A {Acidianus SP} PDB: 3ten_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 284
d1ekja_210 c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum 7e-72
d1ddza2239 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red 2e-60
d1i6pa_214 c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia 6e-52
d1ddza1242 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red a 2e-49
d1g5ca_169 c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Me 2e-32
>d1ekja_ c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum sativum) [TaxId: 3888]} Length = 210 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Resolvase-like
superfamily: beta-carbonic anhydrase, cab
family: beta-carbonic anhydrase, cab
domain: beta-carbonic anhydrase
species: Pea (Pisum sativum) [TaxId: 3888]

 Score =  218 bits (555), Expect = 7e-72
 Identities = 173/210 (82%), Positives = 189/210 (90%)

Query: 75  DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAF 134
           ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +MVFACSDSRVCPSHVLDFQPGEAF
Sbjct: 1   EASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAF 60

Query: 135 VVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNS 194
           VVRNVAN+VPPYDQ KYAG GAA+EYAVLHLKVSNIVVIGHSACGGIKGL+SF FDG  S
Sbjct: 61  VVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYS 120

Query: 195 TDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKT 254
           TDFIE+WVKIG+PAK+KV  +HGD PF + CT+CEKEAVN SL NLLTYPFVREGLVNKT
Sbjct: 121 TDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKT 180

Query: 255 LALKGGYYDFVNGSFELWGLDFSLSPPLSV 284
           LALKGGYYDFV GSFELWGL+F LS   SV
Sbjct: 181 LALKGGYYDFVKGSFELWGLEFGLSSTFSV 210
>d1ddza2 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Length = 239 Back     information, alignment and structure
>d1i6pa_ c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia coli [TaxId: 562]} Length = 214 Back     information, alignment and structure
>d1ddza1 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Length = 242 Back     information, alignment and structure
>d1g5ca_ c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 169 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query284
d1ekja_210 beta-carbonic anhydrase {Pea (Pisum sativum) [TaxI 100.0
d1ddza2239 beta-carbonic anhydrase {Red alga (Porphyridium pu 100.0
d1i6pa_214 beta-carbonic anhydrase {Escherichia coli [TaxId: 100.0
d1ddza1242 beta-carbonic anhydrase {Red alga (Porphyridium pu 100.0
d1g5ca_169 beta-carbonic anhydrase {Archaeon Methanobacterium 100.0
>d1ekja_ c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Resolvase-like
superfamily: beta-carbonic anhydrase, cab
family: beta-carbonic anhydrase, cab
domain: beta-carbonic anhydrase
species: Pea (Pisum sativum) [TaxId: 3888]

Probab=100.00  E-value=4e-61  Score=424.66  Aligned_cols=210  Identities=82%  Similarity=1.381  Sum_probs=192.4

Q ss_pred             HHHHHHHHHHHHHHhhhccCChhhHHhhhcCCCCcEEEEeecCCCCChhhhcCCCCCceEEEEcccccCCCCCCccchhh
Q 023280           75 DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGV  154 (284)
Q Consensus        75 ~~l~~Ll~GN~~F~~~~~~~~p~~~~~La~gQ~P~~lvitCsDSRV~pe~i~~~~pGE~FVvRNaGN~V~~~d~~~~~~~  154 (284)
                      +++++|++||+||+++++.++|++|++|++||+|+++|||||||||+|+.+|+.+|||+||+||+||+|+++|...+.++
T Consensus         1 ~a~e~l~~G~~~f~~~~~~~~~~~~~~l~~gQ~P~~~vi~C~DSRv~~e~if~~~~GdlfvvRnaGn~v~~~~~~~~~~~   80 (210)
T d1ekja_           1 EASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGT   80 (210)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCHHHHHHHTTCCCCSEEEEEECCGGGCHHHHSCCCTTSEEEEEEGGGCCCCSCTTTCHHH
T ss_pred             ChHHHHHHHHHHHHhCccccCHHHHHHHhcCCCCceEEEeccccCCChhhhccCCCCcEEEEeccCCccCccccccchhh
Confidence            36899999999999999999999999999999999999999999999999999999999999999999999876666778


Q ss_pred             HHHHHHHHHhcCcceEEEeccCCCCccccccccccCCCCCchhHHHHHHhccchhhhhhhhcCCCCcccccchHHHHHHH
Q 023280          155 GAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVN  234 (284)
Q Consensus       155 ~asLEyAv~~L~V~~IVV~GHs~CGav~a~~~~~~~g~~~~~~i~~wl~~~~pa~~~~~~~~~~~~~~~~~~~~~~~nV~  234 (284)
                      ++|||||+.+|+|++|||||||+||||+|+++....+....+++..|+..+.|+..............++...++++||+
T Consensus        81 ~~sleyav~~l~v~~IVVlGHt~CGav~Aa~~~~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~nV~  160 (210)
T d1ekja_          81 GAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVN  160 (210)
T ss_dssp             HHHHHHHHHTSCCSEEEEEEESSCHHHHHHHHCCCSSCCCSSSHHHHHGGGHHHHHHHHHHSTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhhcCCceEEEEEcCcchHHHHHhhhhhhccCccCchHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999987766666667789999999999887766655554555566778899999


Q ss_pred             HHHHHhhcChhHHhhhhCCceEEEEEEEEccCCeEEEEeccCCCCCCCCC
Q 023280          235 VSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV  284 (284)
Q Consensus       235 ~qv~~L~~~p~v~~~v~~g~L~V~G~~YDi~tG~v~~~~~~~~~~~~~~~  284 (284)
                      .|+++|++||+|++++++|+|.|||||||++||+|++++.+++.++++|+
T Consensus       161 ~~v~~L~~~p~I~~~v~~g~l~I~G~vYDi~tG~v~~~~~~~g~~~~~~~  210 (210)
T d1ekja_         161 ASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV  210 (210)
T ss_dssp             HHHHHHTTSHHHHHHHHTTSCEEEEEEEETTTTEEEEEEECCCCCCCCCC
T ss_pred             HHHHHHHcCHHHHHHHHcCCeEEEEEEEECCCcEEEEEeccCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999986
>d1ddza2 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Back     information, alignment and structure
>d1i6pa_ c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ddza1 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Back     information, alignment and structure
>d1g5ca_ c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure