Citrus Sinensis ID: 023313

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280----
MLERHLLERPAKIGVGANRAATAASFIEKYGYVDPRDCASSQKNCINPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKDYDRDPEILMHLEAYKVLVLCSKLQIIPCRGCTEDSFKLLLKELVDVK
cHHHHHccccCEEECccccccHHHHHHccccccccccccccccccccHHHHHHHHcccccEEEEcccccccccccccEEEEEEcccccccccccccccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEEEcccCEEccccccccccccccccEEEEEEEccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHccccccccCEEEcccccccccHHHccccccEEEEEEEEEEEEccccccHHHHHHHHHHHHHcc
MLERH**ERPAKIGVGANRAATAASFIEKYGYVDPRDCASSQKNCINPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKDYDRDPEILMHLEAYKVLVLCSKLQIIPCRGCTEDSFKLLLKELVDV*
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MLERHLLERPAKIGVGANRAATAASFIEKYGYVDPRDCASSQKNCINPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKDYDRDPEILMHLEAYKVLVLCSKLQIIPCRGCTEDSFKLLLKELVDVK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable tetraacyldisaccharide 4'-kinase, mitochondrial Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that in bacteria anchors the lipopolysaccharide to the outer membrane of the cell. Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). Lipid A-like molecules in plants may serve as structural components of the outer membranes of mitochondria and/or chloroplasts, or may be involved in signal transduction or plant defense responses.probableQ8LEA0

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4EHX, chain A
Confidence level:very confident
Coverage over the Query: 1-31,59-122,134-212,227-280
View the alignment between query and template
View the model in PyMOL