Citrus Sinensis ID: 023322

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280----
Protein Sequence
MTKGFTFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVAILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNAVGASMSK
Secondary Structure (PSIPRED)
cccccEEcccHHEHHHHHHHHHHEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHccccccEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccccccEEcccccccccEEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEHHHHHHHHHHHHHHHHHHHHHcccHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEcccccEEEEccccEEccccccccccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccEEEEccccccccccccccccHHHHHHHHHccccEEEEEEcccccccccEEcccccccccccccc
Coil and Loop (DISEMBL)
mtkgftfslPVSVVVLAIFYIYFTTVFIFIDRWfglmsspglmNAIVFTAVALMCVFSYTVAIlrdpgrvpadympdveddqnpmheikrkggdlrycqkcshykpprahhcrvckrcvlrmdhhciwisncvghanyKVFFIFVLYAVVACIYSMVLLVGsltndsledelqtggsfRTAYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAekggtvykhpydlgifenltsvlgpnifswvcpssrhigsglnfRTAYHNAVGASMSK
Flexible Loop (DISEMBL)
mtkgftfslPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVAILRDPGRVPADYmpdveddqnpMHEIkrkggdlryCQKCshykpprahhcRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNAVGASMSK
Low Complexity Region (SEG)
MTKGFTFSLPVSVVVLAifyiyfttvfifiDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVAILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAYVIsglllvplsvalsvllGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNAVGASMSK
Disordered region (IsUnstruct)
****FTFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVAILRDPGRVP*********************GDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNA*******
Disordered Region (DISOPRED)
**KGFTFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVAILRDPGRVPADYM*******************LRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCPSSRHIGSGLNFR*************
Disordered Region (DISEMBL)
MTKGFTFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVAILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHN********
Disordered Region (DISPRO)
***GFTFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVAILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCPSSRHIGSGLNFRTA***********
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTKGFTFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVAILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNAVGASMSK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	284	2.2.26 [Sep-21-2011]
Q93VV0	286	Probable S-acyltransferas	yes	no	0.992	0.986	0.719	1e-118
Q500Z2	254	Probable S-acyltransferas	no	no	0.873	0.976	0.501	1e-67
P0CS69	459	Palmitoyltransferase PFA4	N/A	no	0.876	0.542	0.337	6e-35
Q4PE27	604	Palmitoyltransferase PFA4	N/A	no	0.947	0.445	0.306	3e-33
P0CS68	456	Palmitoyltransferase PFA4	no	no	0.866	0.539	0.325	5e-31
Q94C49	302	Probable S-acyltransferas	no	no	0.672	0.632	0.355	3e-27
Q8VYP5	307	Probable S-acyltransferas	no	no	0.746	0.690	0.341	3e-26
Q4WC37	428	Palmitoyltransferase pfa4	yes	no	0.911	0.605	0.304	5e-26
Q5ADN9	386	Palmitoyltransferase PFA3	N/A	no	0.774	0.569	0.308	7e-26
Q6BMV2	405	Palmitoyltransferase PFA3	yes	no	0.676	0.474	0.327	8e-26

>sp|Q93VV0|ZDHC6_ARATH Probable S-acyltransferase At3g09320 OS=Arabidopsis thaliana GN=At3g09320 PE=2 SV=1

 Score =  425 bits (1092), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 203/282 (71%), Positives = 242/282 (85%)

Query: 3   KGFTFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVA 62
           KG  FSLPV+VV+L I +IYF +VF FIDRWF L SSPG+ NA  FTA+ALMC+++Y++A
Sbjct: 4   KGVGFSLPVTVVMLVIGFIYFASVFTFIDRWFSLTSSPGIANAAAFTALALMCIYNYSIA 63

Query: 63  ILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRM 122
           + RDPGRVP +YMPDVED ++P+HEIKRKGGDLRYCQKCSH+KPPRAHHCRVCKRCVLRM
Sbjct: 64  VFRDPGRVPLNYMPDVEDPESPVHEIKRKGGDLRYCQKCSHFKPPRAHHCRVCKRCVLRM 123

Query: 123 DHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAY 182
           DHHCIWI+NCVGH NYKVFF+FV+YAV AC+YS+VLLVGSLT +  ++E + G   RT Y
Sbjct: 124 DHHCIWINNCVGHTNYKVFFVFVVYAVTACVYSLVLLVGSLTVEPQDEEEEMGSYLRTIY 183

Query: 183 VISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIF 242
           VIS  LL+PLS+AL VLLGWHIYLI  NKTTIEYHEGVRA+WLAEKGG VYKHPYD+G +
Sbjct: 184 VISAFLLIPLSIALGVLLGWHIYLILQNKTTIEYHEGVRAMWLAEKGGQVYKHPYDIGAY 243

Query: 243 ENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNAVGASMSK 284
           ENLT +LGPNI SW+CP+SRHIGSG+ FRTA+ +   +S +K
Sbjct: 244 ENLTLILGPNILSWLCPTSRHIGSGVRFRTAFDSIPDSSETK 285

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|Q500Z2|ZDH20_ARATH Probable S-acyltransferase At5g04270 OS=Arabidopsis thaliana GN=At5g04270 PE=2 SV=1

 Score =  256 bits (654), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 128/255 (50%), Positives = 172/255 (67%), Gaps = 7/255 (2%)

Query: 20  YIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVAILRDPGRVPADYMPDVE 79
           ++Y+ T+F+FID W GL SS G +NA++F+ +A +C+FS ++ +L DPGRVPA Y PDVE
Sbjct: 3   FVYYVTLFVFIDDWVGLQSSAGKLNALLFSLLASLCLFSLSICVLVDPGRVPASYAPDVE 62

Query: 80  DDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYK 139
           D       +     + R C KC  YKP R HHCRVC+RCVL+MDHHC+WI+NCVG+ANYK
Sbjct: 63  DSGWSNSNVT----ETRKCDKCFAYKPLRTHHCRVCRRCVLKMDHHCLWINNCVGYANYK 118

Query: 140 VFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAYVISGLLLVPLSVALSVL 199
            FFI V YA VA IYS VLLV     +   D        +T  V  G+ ++ LS+ L  L
Sbjct: 119 AFFILVFYATVASIYSTVLLVCCAFKNG--DSYAGNVPLKTFIVSCGIFMIGLSITLGTL 176

Query: 200 LGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCP 259
           L WHIYLI HN TTIE+++  RA WLA K G  Y+H +D+G ++NLTSVLGPN+  W+CP
Sbjct: 177 LCWHIYLITHNMTTIEHYDSKRASWLARKSGQSYRHQFDVGFYKNLTSVLGPNMIKWLCP 236

Query: 260 S-SRHIGSGLNFRTA 273
           + +R+   G++F  +
Sbjct: 237 TFTRNPEDGISFSAS 251

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P0CS69|PFA4_CRYNB Palmitoyltransferase PFA4 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=PFA4 PE=3 SV=1

 Score =  147 bits (372), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 138/270 (51%), Gaps = 21/270 (7%)

Query: 11  VSVVVLAIFYIYFTTVFIFIDRWFGL-MSSPGLMNAIVFTAVALMCVFSYTVAILRDPGR 69
           V   V+ I +I F++    I  W+G  +S   L   +     A M  ++Y + ++  PG 
Sbjct: 11  VGGTVILISFIAFSSQIFVIWPWYGREISLDLLKLLVPLNLAAFMIFWNYRLCVITSPGS 70

Query: 70  VPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWI 129
           VP  + P++        E+K+     RYC+ C HYKPPRAHHCR CK C L++DHHC WI
Sbjct: 71  VPEGWRPNIGAMDG--MEVKKGTHTPRYCKNCEHYKPPRAHHCRQCKTCWLKLDHHCPWI 128

Query: 130 SNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSL--------TNDSLEDELQTGGSFRTA 181
            NCVG  N   F  F+L+  +   + ++++V  +           +L D L    +F T 
Sbjct: 129 GNCVGFYNQGHFIRFLLWVDIGTTFHLIIMVRRVLYIAEYYHQEPTLADVLFLVFNFATC 188

Query: 182 YVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGG-TVYKHPYDLG 240
                   VP+ + + +   +H+YL   N TTIE  E  +   L  +G     K+PY++G
Sbjct: 189 --------VPVWLCVGMFSIYHVYLACGNSTTIEGWEKDKVATLIRRGKIKEVKYPYNIG 240

Query: 241 IFENLTSVLGPNIFSWVCPSSRHIGSGLNF 270
           I++N+ SVLGPN F W+ P     G GL+F
Sbjct: 241 IYKNIKSVLGPNPFLWLWPQKMQ-GDGLSF 269

Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (taxid: 283643)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q4PE27|PFA4_USTMA Palmitoyltransferase PFA4 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=PFA4 PE=3 SV=1

 Score =  142 bits (357), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 152/297 (51%), Gaps = 28/297 (9%)

Query: 11  VSVVVLAIFYI-YFTTVFIFIDRWFGLMS-SPGLMNAIV--FTAVALMCVFSYTVAILRD 66
           VS+ +L I  + Y + +++ +  +    S SP  + A++  F    L   ++Y + +  D
Sbjct: 75  VSLTLLLIAVLGYSSQLYVMLPYYEKTPSFSPQALAAVLVPFNLGLLAIYYNYWLCVTTD 134

Query: 67  PGRVPADYMPD-----------------VEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRA 109
            G VPA + P+                 +  ++ P  E+K+     RYC+ CS +KPPR+
Sbjct: 135 AGSVPAGWQPEWSALEPVASLAELEHLHLVAEEEPSLELKQAIYRPRYCKTCSAFKPPRS 194

Query: 110 HHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTN--DS 167
           HHC+ C+RCVLRMDHHC W++NCVGH N+  F  F+ Y  V C+Y ++++   + +  +S
Sbjct: 195 HHCKTCQRCVLRMDHHCPWLANCVGHFNHAHFIRFLFYVDVTCLYHLIMISCRVLDSFNS 254

Query: 168 LEDELQTGGSFRTAYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAE 227
                +         V++  L +P+ + + +   +H Y +  N+TTIE  E  R   +  
Sbjct: 255 YTYWREPCARELVWLVVNYALCIPVILLVGIFSLYHFYCLAVNQTTIESWEKDRTATMIR 314

Query: 228 KGGTVY-KHPYDLGIFENLTSVLGPNIFSWVCP--SSRHIGSGLNFRTAYHNAVGAS 281
           +G     K+PYDLG++ N+  VLG +   W  P   +R  G GL +  A  N +G S
Sbjct: 315 RGRVRKVKYPYDLGLWRNVRQVLGASPLVWCLPGAGARMAGDGLKYPVA--NGLGKS 369

Ustilago maydis (strain 521 / FGSC 9021) (taxid: 237631)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P0CS68|PFA4_CRYNJ Palmitoyltransferase PFA4 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=PFA4 PE=3 SV=1

 Score =  134 bits (338), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 135/270 (50%), Gaps = 24/270 (8%)

Query: 11  VSVVVLAIFYIYFTTVFIFIDRWFGL-MSSPGLMNAIVFTAVALMCVFSYTVAILRDPGR 69
           V   V+ I +I F++    I  W+G  +S   L   +     A M  ++Y + ++  PG 
Sbjct: 11  VGGTVILISFIAFSSQIFVIWPWYGREISLDLLKLLVPLNLAAFMIFWNYRLCVITSPGS 70

Query: 70  VPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWI 129
           VP  + P++        E+K+     RYC+ C HYKPPRAHHCR CK C +   +HC WI
Sbjct: 71  VPEGWRPNIGAMDG--MEVKKGTHTPRYCKNCEHYKPPRAHHCRQCKTCWV---NHCPWI 125

Query: 130 SNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSL--------TNDSLEDELQTGGSFRTA 181
            NCVG  N   F  F+L+  +   + ++++V  +           +L D L    +F T 
Sbjct: 126 GNCVGFYNQGHFIRFLLWVDIGTTFHLIIMVRRVLYIAEYYHQEPTLADVLFLVFNFATC 185

Query: 182 YVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGG-TVYKHPYDLG 240
                   VP+ + + +   +H+YL   N TTIE  E  +   L  +G     K+PY++G
Sbjct: 186 --------VPVWLCVGMFSIYHVYLACGNSTTIEGWEKDKVATLIRRGKIKEVKYPYNIG 237

Query: 241 IFENLTSVLGPNIFSWVCPSSRHIGSGLNF 270
           I++N+ SVLGPN F W+ P     G GL+F
Sbjct: 238 IYKNIKSVLGPNPFLWLWPQKMQ-GDGLSF 266

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q94C49|ZDH18_ARATH Probable S-acyltransferase At4g22750 OS=Arabidopsis thaliana GN=At4g22750 PE=2 SV=1

 Score =  122 bits (306), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 118/222 (53%), Gaps = 31/222 (13%)

Query: 53  LMCVFSYTVAILRDPGRVPADYMPDVEDDQNPMHEI---KRKGGD-----LRYCQKCSHY 104
           +M ++SY   ++ DPG VP  + P+++ +++  ++    +   GD     +RYC+KC+ Y
Sbjct: 65  IMLLWSYFSVVVTDPGGVPTGWRPELDIEKSEGNQALIGEASVGDSSSHGVRYCRKCNQY 124

Query: 105 KPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLY-----AVVACIYSMVLL 159
           KPPR+HHC VC RC+L+MDHHC+W+ NCVG  NYK F +F+ Y      VVA     + L
Sbjct: 125 KPPRSHHCSVCGRCILKMDHHCVWVVNCVGANNYKSFLLFLFYTFLETTVVAVSLLPIFL 184

Query: 160 VGSLTNDSLEDELQTGGSFRTAYVISGLLLVPLSVALSVL--LGWHIYLIFHNKTTIEYH 217
           V    +D   D   + GS   ++V     ++ ++ ALSVL  L  HI L+  N TTIE +
Sbjct: 185 V--FFSDGDGDITVSPGSLAASFVA---FVLNIAFALSVLGFLIMHIMLVARNTTTIEAY 239

Query: 218 EGVRALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCP 259
           E     W           PY++G   N   V G +   W  P
Sbjct: 240 EKHTVNW-----------PYNVGRKTNFEQVFGSDKMYWFVP 270

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q8VYP5|ZDH14_ARATH Probable S-acyltransferase At3g60800 OS=Arabidopsis thaliana GN=At3g60800 PE=2 SV=1

 Score =  119 bits (297), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 125/240 (52%), Gaps = 28/240 (11%)

Query: 35  GLMSSPGLMNAIVFTAVALMCVFSYTVAILRDPGRVPADYMPDVEDDQ---NPMHEIKRK 91
           GL S   L   I+F  +  M ++SY   +  DPG VP ++ P  ++++   +P++ +   
Sbjct: 54  GLDSLAALTILILFHFLLAMLLWSYFSVVFTDPGVVPPNWRPSTDEERGESDPLNSLDFV 113

Query: 92  G---------GDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFF 142
           G           +R+C+KC+  KP R HHC VC RCVL+MDHHC+W+ NCVG  NYK F 
Sbjct: 114 GLQSDSSSSNPRVRFCRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFL 173

Query: 143 IFVLYAVV-ACIYSMVLLVGSLTNDSLEDELQTGGSFRTAYVISGLLLVPLSVALSVL-- 199
           +F+ Y  +   + ++VL+   +   S E+   T G+  T ++     ++ L+ ALSV+  
Sbjct: 174 LFLFYTFLETTLVTLVLMPHFIAFFSDEEIPGTPGTLATTFLA---FVLNLAFALSVMGF 230

Query: 200 LGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCP 259
           L  HI L+  N TTIE +E            T  K  YDLG  +N   V G +   W+ P
Sbjct: 231 LIMHISLVAGNTTTIEAYE----------KKTTTKWRYDLGKKKNFEQVFGMDKRYWLIP 280

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q4WC37|PFA4_ASPFU Palmitoyltransferase pfa4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pfa4 PE=3 SV=2

 Score =  118 bits (295), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 142/299 (47%), Gaps = 40/299 (13%)

Query: 1   MTKGFTFS-LPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSY 59
           + + F  S L +  V + I ++ +T+   F       + S       +F     +C   Y
Sbjct: 2   LCRSFNISQLAIPFVSVLISFLAYTSQLFFYYFEEAPLRSEEFWRLNIFAVCIWVC---Y 58

Query: 60  TVAILRDPGRVPADYMPDVEDDQNPMHEIKRK--GGDLRYCQKCSHYKPPRAHHCRVCKR 117
             A   DPGR+P D+ P        + ++++   GG  R+C++C  +KPPRAHHC+ C+R
Sbjct: 59  YRACTVDPGRIPKDWTPPN------LKQLEKDCAGGRQRWCRRCEAFKPPRAHHCKTCQR 112

Query: 118 CVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLT----NDSLEDELQ 173
           C+ +MDHHC W SNCV H  Y  F  F+ YAVV   Y   LL    +    +  L   L 
Sbjct: 113 CIPKMDHHCPWTSNCVSHFTYPHFMRFLFYAVVGMGYLETLLFERASIVWASRHLPSYLG 172

Query: 174 TG-GSFRTAYVISGLLLVPLS-VALSVLLGWHIYLIFHNKTTIEYHEGVR---------- 221
            G G     +++  L++  L+ +AL +LL   I+ +  N TTIE  E  R          
Sbjct: 173 PGLGQLVHLFIL--LVVNSLTWLALFILLLRSIWSLALNTTTIESWEIERHETLLRRARH 230

Query: 222 -ALWLAEKGG-----TVYKHPYDLGIFENLTSVLG--PNIFSWVCP--SSRHIGSGLNF 270
              +L+  GG        + PYD+GI+ N+ + +G   N+ SW  P  ++    +GL F
Sbjct: 231 FGGYLSGPGGIQIRIKKQEFPYDIGIWSNIRAGMGGSANVLSWFWPFAATPDRSTGLEF 289

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5ADN9|PFA3_CANAL Palmitoyltransferase PFA3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PFA3 PE=3 SV=1

 Score =  117 bits (294), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 122/282 (43%), Gaps = 62/282 (21%)

Query: 46  IVFTAVALMCVFSYTVAILRDPGRVPADYMPDVEDDQNPM-------------------- 85
           I+   + ++C+ SY   IL  PG  P DY     +D N M                    
Sbjct: 72  IIGITLYVLCIISYYKIILIGPGS-PLDYPELRINDLNRMINENPYNNNNNDEEPGDLPP 130

Query: 86  -----HEIKRKGGD-LRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYK 139
                H +K  G    RYC KCS +KP R+HHC    +C+L+MDH+C W S C+G  NYK
Sbjct: 131 ESMIIHTMKVNGNQGYRYCTKCSVWKPDRSHHCSSSGKCILKMDHYCPWFSTCIGFHNYK 190

Query: 140 VFFIFVLYAVVAC----IYSMVLLVGSLTNDSLEDELQTGGSFRTAYVISGLLLVPLSVA 195
            F  F+ Y  + C    I S  +L   +T    EDE+          V   +L    ++A
Sbjct: 191 FFIQFLSYVAIYCWFLFIISGKILYNFITEGLFEDEI-----LSLNLVAVLILSFAFAIA 245

Query: 196 LSVLLGWHIYLIFHNKTTIEYHE----------GVRALWLAEKGGTVYK---HPYDLGIF 242
           +SV   + IYL   N TTIE+ E            R  +  +  G   K   + +DLGI 
Sbjct: 246 VSVFAMFSIYLCCKNLTTIEFQEKRWNYRGQANDERFNYEFDNNGKRKKINTNIFDLGIM 305

Query: 243 ENLTSVLGPNIFSWVCP-------------SSRHIGSGLNFR 271
           EN  SV+GPN  +W+ P             S     +G+NF+
Sbjct: 306 ENWKSVMGPNWITWILPITVTVTANTKSMISQDEFNNGVNFK 347

Palmitoyltransferase specific for VAC8. Palmitoylates VAC8 at one or more of its N-terminal cysteine residues, which is required for its proper membrane localization.

Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q6BMV2|PFA3_DEBHA Palmitoyltransferase PFA3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PFA3 PE=3 SV=2

 Score =  117 bits (294), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 114/229 (49%), Gaps = 37/229 (16%)

Query: 73  DYMPDVEDDQNP-----MHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCI 127
           D +  +E +Q P     +H +K      RYC KCS +KP R HHC  C RCVLRMDHHC 
Sbjct: 139 DEIESIESEQPPSEYMTLHMLKSNNSSYRYCTKCSVWKPDRCHHCSTCNRCVLRMDHHCP 198

Query: 128 WISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAYV-ISG 186
           W + CVG  N+K F  F++Y      YS    V SL   S+  +      +   Y+ ++ 
Sbjct: 199 WFAMCVGFYNHKFFAQFLMYLTA---YSGFDFVVSL---SILWKFFADEKYNDHYLSLNL 252

Query: 187 LLLVPLSVALSVLLG----WHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHP------ 236
           + L  LS+A  + +G    + +YL+F NKTTIE+ E  R  +  +K G  +++       
Sbjct: 253 VFLFVLSLAFFITVGGFSAFSLYLVFRNKTTIEFQEN-RWNFKNDKNGKSFQYEFDGSGK 311

Query: 237 -------YDLGIFENLTSVLGPNIFSWVCPSS-------RHIGSGLNFR 271
                  +DLG   N  S++GP+ + W+ P +         + +G+NF 
Sbjct: 312 KKKLGNIFDLGCGRNWRSIMGPSWYYWLLPVTVTNKSIDARLENGINFE 360

Palmitoyltransferase specific for VAC8. Palmitoylates VAC8 at one or more of its N-terminal cysteine residues, which is required for its proper membrane localization.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	284
224090729	283	predicted protein [Populus trichocarpa]	0.992	0.996	0.787	1e-130
449440325	282	PREDICTED: probable S-acyltransferase At	0.992	1.0	0.787	1e-129
255581514	284	zinc finger protein, putative [Ricinus c	1.0	1.0	0.735	1e-129
356504262	292	PREDICTED: probable S-acyltransferase At	0.978	0.952	0.784	1e-125
359481768	274	PREDICTED: probable S-acyltransferase At	0.950	0.985	0.788	1e-125
224140283	282	predicted protein [Populus trichocarpa]	0.992	1.0	0.773	1e-124
356494828	293	PREDICTED: probable S-acyltransferase At	0.982	0.952	0.771	1e-123
297833690	286	zinc finger family protein [Arabidopsis	0.992	0.986	0.726	1e-121
18398471	286	putative S-acyltransferase [Arabidopsis	0.992	0.986	0.719	1e-116
6478924	287	unknown protein [Arabidopsis thaliana]	0.992	0.982	0.717	1e-115

>gi|224090729|ref|XP_002309068.1| predicted protein [Populus trichocarpa] gi|222855044|gb|EEE92591.1| predicted protein [Populus trichocarpa]

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 222/282 (78%), Positives = 253/282 (89%)

Query: 1   MTKGFTFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYT 60
           M +  +FSLPV+VVVLAI YIY +T+F+FIDRWFGLMSSPG+MNA+VFTA+ALM VF+Y 
Sbjct: 1   MKRPLSFSLPVTVVVLAILYIYLSTIFVFIDRWFGLMSSPGIMNAVVFTALALMSVFNYA 60

Query: 61  VAILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVL 120
           +AIL DPGRVP  +MPDVED  NP+HEIKRKGGDLR+CQKCSH+KPPRAHHCRVC+RCVL
Sbjct: 61  IAILTDPGRVPPSFMPDVEDSDNPVHEIKRKGGDLRFCQKCSHFKPPRAHHCRVCRRCVL 120

Query: 121 RMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRT 180
           RMDHHCIWISNCVGHANYKVFF+FV+YAV+ACIYS+VLLVGSLT D  +DELQ+G SFRT
Sbjct: 121 RMDHHCIWISNCVGHANYKVFFVFVVYAVIACIYSLVLLVGSLTVDPQKDELQSGDSFRT 180

Query: 181 AYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLG 240
            YVISGLLLVPLS AL VLLGWH+YLI  NKTTIEYHEGVRA+WLAEKGG VYKHPYD+G
Sbjct: 181 IYVISGLLLVPLSAALGVLLGWHVYLILQNKTTIEYHEGVRAMWLAEKGGHVYKHPYDVG 240

Query: 241 IFENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNAVGASM 282
            +ENLT+VLGP+IF WVCP+S HIGSGL FRTAY +  GAS+
Sbjct: 241 AYENLTTVLGPSIFCWVCPTSGHIGSGLRFRTAYDSMTGASV 282

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440325|ref|XP_004137935.1| PREDICTED: probable S-acyltransferase At3g09320-like [Cucumis sativus] gi|449483661|ref|XP_004156652.1| PREDICTED: probable S-acyltransferase At3g09320-like [Cucumis sativus]

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 222/282 (78%), Positives = 253/282 (89%)

Query: 1   MTKGFTFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYT 60
           M +GFTFS PV+VVVLAI +IYF+TVFIFIDRWFG MSSPG+MNAIVFTAVALMC+ +Y 
Sbjct: 1   MKQGFTFSPPVTVVVLAISFIYFSTVFIFIDRWFGFMSSPGIMNAIVFTAVALMCITNYA 60

Query: 61  VAILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVL 120
           +AI  DPGRVP+ YMPD+ED +NP+HEIKRKGGDLRYCQKCS YKPPRAHHCRVCKRC+L
Sbjct: 61  LAIFTDPGRVPSTYMPDIEDSENPIHEIKRKGGDLRYCQKCSQYKPPRAHHCRVCKRCIL 120

Query: 121 RMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRT 180
           RMDHHCIWI+NCVGH NYKVFF+FV+YAVVACIYS++LL+GSLT +  +DE Q GG FRT
Sbjct: 121 RMDHHCIWINNCVGHENYKVFFVFVVYAVVACIYSLILLIGSLTIEPPKDEQQVGGPFRT 180

Query: 181 AYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLG 240
            YV++GLLL PLS+ALSVLLGWHIYLI HNKTTIEYHEGVRA+WLAEKGG VY HPYDLG
Sbjct: 181 VYVVAGLLLFPLSMALSVLLGWHIYLILHNKTTIEYHEGVRAMWLAEKGGNVYSHPYDLG 240

Query: 241 IFENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNAVGASM 282
            FENLT++LGPNIFSW+CP+SRH GSGL FRTAY  ++ ASM
Sbjct: 241 AFENLTTILGPNIFSWICPTSRHKGSGLRFRTAYDKSITASM 282

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581514|ref|XP_002531563.1| zinc finger protein, putative [Ricinus communis] gi|223528824|gb|EEF30829.1| zinc finger protein, putative [Ricinus communis]

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 209/284 (73%), Positives = 247/284 (86%)

Query: 1   MTKGFTFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYT 60
           M +   FS+PV+VVVLAI YIYF+T+F+FI+ WFGLM+SPG+MNA+VFTA+A MC+ +Y 
Sbjct: 1   MKRSSGFSVPVTVVVLAIIYIYFSTLFVFIEGWFGLMTSPGIMNAVVFTAMAFMCILNYA 60

Query: 61  VAILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVL 120
            AI  DPGRVP+ Y PD+ED  NP+HEIKRKGGDLR+CQKCSH+KPPRAHHCRVCKRCVL
Sbjct: 61  YAIFTDPGRVPSTYTPDIEDADNPVHEIKRKGGDLRFCQKCSHFKPPRAHHCRVCKRCVL 120

Query: 121 RMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRT 180
           RMDHHCIWI+NCVGHANYKVFF+FV+YAV++CIYS+VLL+GSLT D  +DE Q+ GSFR+
Sbjct: 121 RMDHHCIWINNCVGHANYKVFFVFVIYAVISCIYSLVLLIGSLTIDPQKDEQQSSGSFRS 180

Query: 181 AYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLG 240
            YVISG+LL+PLSVAL +LLGWH+YLI  NKTTIEYHEGVRA+WLAEKGG VYKHPYD+G
Sbjct: 181 IYVISGVLLIPLSVALGILLGWHVYLILQNKTTIEYHEGVRAMWLAEKGGDVYKHPYDIG 240

Query: 241 IFENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNAVGASMSK 284
            +ENLT VLGP+IF W CP+S H+GSGL FRTAY N   AS SK
Sbjct: 241 AYENLTMVLGPSIFCWACPTSGHVGSGLRFRTAYDNPTVASTSK 284

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504262|ref|XP_003520916.1| PREDICTED: probable S-acyltransferase At3g09320-like [Glycine max]

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 219/279 (78%), Positives = 244/279 (87%), Gaps = 1/279 (0%)

Query: 7   FSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVAILRD 66
            SLPVSVVVLAI YIYF+TVF+FIDRW GL SSPG+MNA VF+A+A  C  +Y  AI  D
Sbjct: 14  LSLPVSVVVLAIAYIYFSTVFVFIDRWLGLFSSPGIMNAAVFSALAAACALTYRAAISTD 73

Query: 67  PGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHC 126
           PGRVPA YMPDVED ++P+HEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHC
Sbjct: 74  PGRVPATYMPDVEDAESPIHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHC 133

Query: 127 IWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTG-GSFRTAYVIS 185
           IWI+NCVGHANYKVFFIFVLYAV+ACIYS+VLLVGSL +DS++DE + G  SFRT YV+S
Sbjct: 134 IWINNCVGHANYKVFFIFVLYAVIACIYSLVLLVGSLASDSIQDEEKNGRSSFRTVYVVS 193

Query: 186 GLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIFENL 245
           GLLLVPLS+AL VLLGWHIYLI HNKTTIEYHEGVRALWLAEKGG++YKHPYDLG +ENL
Sbjct: 194 GLLLVPLSIALCVLLGWHIYLILHNKTTIEYHEGVRALWLAEKGGSIYKHPYDLGPYENL 253

Query: 246 TSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNAVGASMSK 284
           T VLGPNI SW+ P++ HIGSGL +RT Y    GAS SK
Sbjct: 254 TFVLGPNILSWLWPTANHIGSGLRYRTIYDLPKGASTSK 292

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481768|ref|XP_002270930.2| PREDICTED: probable S-acyltransferase At3g09320-like [Vitis vinifera] gi|297740351|emb|CBI30533.3| unnamed protein product [Vitis vinifera]

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 213/270 (78%), Positives = 238/270 (88%)

Query: 1   MTKGFTFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYT 60
           M+    FSLPV VV  AI YIYF+TVFIFID WFGL +SPG++NAI FTAVA MCV +Y 
Sbjct: 1   MSPNCKFSLPVFVVASAITYIYFSTVFIFIDMWFGLTTSPGILNAIAFTAVAFMCVLNYV 60

Query: 61  VAILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVL 120
           VAIL DPGRVPA +MPD+ED Q+P+HEIKRKGGDLRYCQKC+HYKP RAHHCRVC+RCVL
Sbjct: 61  VAILTDPGRVPATFMPDIEDSQSPIHEIKRKGGDLRYCQKCAHYKPARAHHCRVCRRCVL 120

Query: 121 RMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRT 180
           RMDHHCIWI+NCVGHANYK FFIFVLYAV+ CIYS+VLLVGS+ ND+ +DE Q+GGSFR 
Sbjct: 121 RMDHHCIWINNCVGHANYKAFFIFVLYAVLGCIYSLVLLVGSIYNDAEKDEEQSGGSFRN 180

Query: 181 AYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLG 240
           AYVISGLLLVPLSVAL VLLGWHIYLI  NKTTIEYHEGVRAL+LAEKGG V K+ YDLG
Sbjct: 181 AYVISGLLLVPLSVALMVLLGWHIYLILQNKTTIEYHEGVRALYLAEKGGNVSKNFYDLG 240

Query: 241 IFENLTSVLGPNIFSWVCPSSRHIGSGLNF 270
            +ENLTSVLGP+IFSWVCP+S+HIGSGL F
Sbjct: 241 AYENLTSVLGPSIFSWVCPTSKHIGSGLRF 270

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140283|ref|XP_002323512.1| predicted protein [Populus trichocarpa] gi|222868142|gb|EEF05273.1| predicted protein [Populus trichocarpa]

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 218/282 (77%), Positives = 244/282 (86%)

Query: 1   MTKGFTFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYT 60
           M +  +FSLPV+VVVLAI YIYF+T+F+FID WFGLMSSPG++NA+VFTAVA M VFSY 
Sbjct: 1   MKRRVSFSLPVTVVVLAIIYIYFSTIFVFIDGWFGLMSSPGILNAVVFTAVAFMSVFSYA 60

Query: 61  VAILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVL 120
           VAIL D GRVP  +MPD+ED  NP+HEIKRKGGDLRYCQKCSH+KPPRAHHCRVCKRCVL
Sbjct: 61  VAILMDAGRVPFTFMPDIEDSSNPVHEIKRKGGDLRYCQKCSHFKPPRAHHCRVCKRCVL 120

Query: 121 RMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRT 180
           RMDHHCIWISNCVGHANYKVFF+FV+YAV+ACIYS+VLLVGSLT D  + EL  G SFRT
Sbjct: 121 RMDHHCIWISNCVGHANYKVFFVFVVYAVIACIYSLVLLVGSLTVDPQKHELNNGDSFRT 180

Query: 181 AYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLG 240
            YVISGLLLVPLSVAL VLLGWH+YLI  NKTTIE+HEGVRA+WLAEK G VYKHPYD+G
Sbjct: 181 IYVISGLLLVPLSVALGVLLGWHVYLILQNKTTIEFHEGVRAMWLAEKEGHVYKHPYDVG 240

Query: 241 IFENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNAVGASM 282
            +ENLT VLGP+I  WVCP+S HIGSGL FRTAY     AS+
Sbjct: 241 TYENLTMVLGPSISCWVCPTSGHIGSGLRFRTAYDGMSSASV 282

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356494828|ref|XP_003516285.1| PREDICTED: probable S-acyltransferase At3g09320-like [Glycine max]

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 216/280 (77%), Positives = 242/280 (86%), Gaps = 1/280 (0%)

Query: 6   TFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVAILR 65
           T SL VSVVVLAI YIY +TVF+FIDRW GL SSPG+MNA VF+A+A  C  +Y  AI  
Sbjct: 14  TLSLAVSVVVLAIAYIYVSTVFVFIDRWLGLFSSPGIMNAAVFSALAAACALTYRAAIST 73

Query: 66  DPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHH 125
           DPGRVPA YMPDVED ++P+HEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHH
Sbjct: 74  DPGRVPATYMPDVEDAESPIHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHH 133

Query: 126 CIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQT-GGSFRTAYVI 184
           CIWI+NCVGHANYKVFFIFVLYAV+ACIYS+VLLVGSL +D ++DE +    SFRT YV+
Sbjct: 134 CIWINNCVGHANYKVFFIFVLYAVIACIYSLVLLVGSLASDGVQDEEKNRRSSFRTVYVV 193

Query: 185 SGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIFEN 244
           SGLLLVPLS+AL VLLGWHIYL+ HNKTTIEYHEGVRALWLAEKGG++YKHPYDLG +EN
Sbjct: 194 SGLLLVPLSIALCVLLGWHIYLMLHNKTTIEYHEGVRALWLAEKGGSIYKHPYDLGPYEN 253

Query: 245 LTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNAVGASMSK 284
           LTSVLGPNI SW+ P++ HIGSGL +RT Y    GAS SK
Sbjct: 254 LTSVLGPNILSWLWPTANHIGSGLRYRTIYDLPKGASTSK 293

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297833690|ref|XP_002884727.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297330567|gb|EFH60986.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 205/282 (72%), Positives = 243/282 (86%)

Query: 3   KGFTFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVA 62
           KG  FSLPV+VV+L I +IYF +VF FIDRWF L SSPG+ NA VFTA+ALMCV++Y++A
Sbjct: 4   KGVGFSLPVTVVMLVIGFIYFASVFTFIDRWFSLTSSPGIANAAVFTALALMCVYNYSIA 63

Query: 63  ILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRM 122
           + RDPGRVP +YMPDVED ++P+HEIKRKGGDLRYCQKCSH+KPPRAHHCRVCKRCVLRM
Sbjct: 64  VFRDPGRVPLNYMPDVEDPESPVHEIKRKGGDLRYCQKCSHFKPPRAHHCRVCKRCVLRM 123

Query: 123 DHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAY 182
           DHHCIWI+NCVGH NYKVFF+FV+YAV AC+YS+VLLVGSLT +  ++E + G   RT Y
Sbjct: 124 DHHCIWINNCVGHTNYKVFFVFVVYAVTACVYSLVLLVGSLTVEPQDEEEEMGSYLRTIY 183

Query: 183 VISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIF 242
           VIS  LL+PLS+AL VLLGWHIYLI  NKTTIEYHEGVRA+WLAEKGG VYKHPYD+G +
Sbjct: 184 VISAFLLIPLSIALGVLLGWHIYLILQNKTTIEYHEGVRAMWLAEKGGQVYKHPYDIGAY 243

Query: 243 ENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNAVGASMSK 284
           ENLT +LGPNI SW+CP+SRHIGSG+ FRTA+ +   +S +K
Sbjct: 244 ENLTLILGPNILSWLCPTSRHIGSGVRFRTAFDSIPTSSETK 285

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18398471|ref|NP_566348.1| putative S-acyltransferase [Arabidopsis thaliana] gi|75249276|sp|Q93VV0.1|ZDHC6_ARATH RecName: Full=Probable S-acyltransferase At3g09320; AltName: Full=Probable palmitoyltransferase At3g09320; AltName: Full=Zinc finger DHHC domain-containing protein At3g09320 gi|14517366|gb|AAK62574.1| AT3g09320/F3L24_19 [Arabidopsis thaliana] gi|16323274|gb|AAL15371.1| AT3g09320/F3L24_19 [Arabidopsis thaliana] gi|332641229|gb|AEE74750.1| putative S-acyltransferase [Arabidopsis thaliana]

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/282 (71%), Positives = 242/282 (85%)

Query: 3   KGFTFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVA 62
           KG  FSLPV+VV+L I +IYF +VF FIDRWF L SSPG+ NA  FTA+ALMC+++Y++A
Sbjct: 4   KGVGFSLPVTVVMLVIGFIYFASVFTFIDRWFSLTSSPGIANAAAFTALALMCIYNYSIA 63

Query: 63  ILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRM 122
           + RDPGRVP +YMPDVED ++P+HEIKRKGGDLRYCQKCSH+KPPRAHHCRVCKRCVLRM
Sbjct: 64  VFRDPGRVPLNYMPDVEDPESPVHEIKRKGGDLRYCQKCSHFKPPRAHHCRVCKRCVLRM 123

Query: 123 DHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAY 182
           DHHCIWI+NCVGH NYKVFF+FV+YAV AC+YS+VLLVGSLT +  ++E + G   RT Y
Sbjct: 124 DHHCIWINNCVGHTNYKVFFVFVVYAVTACVYSLVLLVGSLTVEPQDEEEEMGSYLRTIY 183

Query: 183 VISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIF 242
           VIS  LL+PLS+AL VLLGWHIYLI  NKTTIEYHEGVRA+WLAEKGG VYKHPYD+G +
Sbjct: 184 VISAFLLIPLSIALGVLLGWHIYLILQNKTTIEYHEGVRAMWLAEKGGQVYKHPYDIGAY 243

Query: 243 ENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNAVGASMSK 284
           ENLT +LGPNI SW+CP+SRHIGSG+ FRTA+ +   +S +K
Sbjct: 244 ENLTLILGPNILSWLCPTSRHIGSGVRFRTAFDSIPDSSETK 285

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6478924|gb|AAF14029.1|AC011436_13 unknown protein [Arabidopsis thaliana]

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 203/283 (71%), Positives = 242/283 (85%), Gaps = 1/283 (0%)

Query: 3   KGFTFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVA 62
           KG  FSLPV+VV+L I +IYF +VF FIDRWF L SSPG+ NA  FTA+ALMC+++Y++A
Sbjct: 4   KGVGFSLPVTVVMLVIGFIYFASVFTFIDRWFSLTSSPGIANAAAFTALALMCIYNYSIA 63

Query: 63  ILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRM 122
           + RDPGRVP +YMPDVED ++P+HEIKRKGGDLRYCQKCSH+KPPRAHHCRVCKRCVLRM
Sbjct: 64  VFRDPGRVPLNYMPDVEDPESPVHEIKRKGGDLRYCQKCSHFKPPRAHHCRVCKRCVLRM 123

Query: 123 DHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAY 182
           DHHCIWI+NCVGH NYKVFF+FV+YAV AC+YS+VLLVGSLT +  ++E + G   RT Y
Sbjct: 124 DHHCIWINNCVGHTNYKVFFVFVVYAVTACVYSLVLLVGSLTVEPQDEEEEMGSYLRTIY 183

Query: 183 VISGLLLVPLSVALSVLLGWHIYLIFHNKTTIE-YHEGVRALWLAEKGGTVYKHPYDLGI 241
           VIS  LL+PLS+AL VLLGWHIYLI  NKTTIE YHEGVRA+WLAEKGG VYKHPYD+G 
Sbjct: 184 VISAFLLIPLSIALGVLLGWHIYLILQNKTTIEVYHEGVRAMWLAEKGGQVYKHPYDIGA 243

Query: 242 FENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNAVGASMSK 284
           +ENLT +LGPNI SW+CP+SRHIGSG+ FRTA+ +   +S +K
Sbjct: 244 YENLTLILGPNILSWLCPTSRHIGSGVRFRTAFDSIPDSSETK 286

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	284
TAIR|locus:2083504	286	AT3G09320 [Arabidopsis thalian	0.992	0.986	0.652	1.5e-106
TAIR|locus:2146713	254	AT5G04270 [Arabidopsis thalian	0.823	0.921	0.485	2.4e-60
GENEDB_PFALCIPARUM|PF10_0273	270	PF10_0273 "DHHC-type zinc fing	0.778	0.818	0.330	2.1e-29
UNIPROTKB|Q8IJC5	270	PF10_0273 "DHHC-type zinc fing	0.778	0.818	0.330	2.1e-29
TAIR|locus:2134643	291	AT4G00840 [Arabidopsis thalian	0.757	0.738	0.323	2.4e-28
TAIR|locus:2132654	324	AT4G22750 [Arabidopsis thalian	0.693	0.608	0.336	3.9e-28
TAIR|locus:2101806	307	AT3G60800 "AT3G60800" [Arabido	0.753	0.697	0.327	8.2e-28
DICTYBASE|DDB_G0293930	319	DDB_G0293930 "putative palmito	0.658	0.586	0.321	1e-27
ASPGD|ASPL0000047879	435	AN1565 [Emericella nidulans (t	0.352	0.229	0.447	5.6e-27
DICTYBASE|DDB_G0279395	442	DDB_G0279395 "DHHC-type zinc f	0.193	0.124	0.545	2.8e-26

TAIR|locus:2083504 AT3G09320 [Arabidopsis thaliana (taxid:3702)]

 Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
 Identities = 184/282 (65%), Positives = 219/282 (77%)

Query:     3 KGFTFSLPVSVVVLAXXXXXXXXXXXXXDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVA 62
             KG  FSLPV+VV+L              DRWF L SSPG+ NA  FTA+ALMC+++Y++A
Sbjct:     4 KGVGFSLPVTVVMLVIGFIYFASVFTFIDRWFSLTSSPGIANAAAFTALALMCIYNYSIA 63

Query:    63 ILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRM 122
             + RDPGRVP +YMPDVED ++P+HEIKRKGGDLRYCQKCSH+KPPRAHHCRVCKRCVLRM
Sbjct:    64 VFRDPGRVPLNYMPDVEDPESPVHEIKRKGGDLRYCQKCSHFKPPRAHHCRVCKRCVLRM 123

Query:   123 DHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAY 182
             DHHCIWI+NCVGH NYKVFF+FV+YAV AC+YS+VLLVGSLT +  ++E + G   RT Y
Sbjct:   124 DHHCIWINNCVGHTNYKVFFVFVVYAVTACVYSLVLLVGSLTVEPQDEEEEMGSYLRTIY 183

Query:   183 VIXXXXXXXXXXXXXXXXGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIF 242
             VI                GWHIYLI  NKTTIEYHEGVRA+WLAEKGG VYKHPYD+G +
Sbjct:   184 VISAFLLIPLSIALGVLLGWHIYLILQNKTTIEYHEGVRAMWLAEKGGQVYKHPYDIGAY 243

Query:   243 ENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNAVGASMSK 284
             ENLT +LGPNI SW+CP+SRHIGSG+ FRTA+ +   +S +K
Sbjct:   244 ENLTLILGPNILSWLCPTSRHIGSGVRFRTAFDSIPDSSETK 285

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2146713 AT5G04270 [Arabidopsis thaliana (taxid:3702)]

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 117/241 (48%), Positives = 151/241 (62%)

Query:    31 DRWFGLMSSPGLMNAIVFTAVALMCVFSYTVAILRDPGRVPADYMPDVEDDQNPMHEIKR 90
             D W GL SS G +NA++F+ +A +C+FS ++ +L DPGRVPA Y PDVED       +  
Sbjct:    14 DDWVGLQSSAGKLNALLFSLLASLCLFSLSICVLVDPGRVPASYAPDVEDSGWSNSNVT- 72

Query:    91 KGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVV 150
                + R C KC  YKP R HHCRVC+RCVL+MDHHC+WI+NCVG+ANYK FFI V YA V
Sbjct:    73 ---ETRKCDKCFAYKPLRTHHCRVCRRCVLKMDHHCLWINNCVGYANYKAFFILVFYATV 129

Query:   151 ACIYSMVLLVGSLTNDSLEDELQTGGSFRTAYVIXXXXXXXXXXXXXXXXGWHIYLIFHN 210
             A IYS VLLV     +   D        +T  V                  WHIYLI HN
Sbjct:   130 ASIYSTVLLVCCAFKNG--DSYAGNVPLKTFIVSCGIFMIGLSITLGTLLCWHIYLITHN 187

Query:   211 KTTIEYHEGVRALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCPS-SRHIGSGLN 269
              TTIE+++  RA WLA K G  Y+H +D+G ++NLTSVLGPN+  W+CP+ +R+   G++
Sbjct:   188 MTTIEHYDSKRASWLARKSGQSYRHQFDVGFYKNLTSVLGPNMIKWLCPTFTRNPEDGIS 247

Query:   270 F 270
             F
Sbjct:   248 F 248

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GENEDB_PFALCIPARUM|PF10_0273 PF10_0273 "DHHC-type zinc finger protein, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 77/233 (33%), Positives = 114/233 (48%)

Query:    41 GLMNAIVFTAVALMCVFSYTVAILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQK 100
             G    + F  + L+ ++S+      +PG +P +Y   V+ +   + E + K G+LRYC  
Sbjct:    42 GYTKLLTFHILLLLLIWSFYKTYKVNPGNIPDNYEWKVDPNIGRIKE-REKTGELRYCIH 100

Query:   101 CSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLV 160
                YKP R+H+CR  ++ VL+MDH+C W++NCVG  NYK F + + YA + C+Y  +   
Sbjct:   101 EKKYKPDRSHYCRAIEKNVLKMDHYCPWVANCVGFYNYKFFLLSLFYANICCLYVNINCY 160

Query:   161 GSLTNDSLEDELQTGGSFRTAYVIXXXXXXXXXXXXXXXXGWHIYLIFHNKTTIEYHEGV 220
              S  N      +     F     I                 +HIYL   N TT+E+   V
Sbjct:   161 TSFPNFYSNPNILFNEVFYLFLEIVLASVILIIIFPFFL--FHIYLTSKNYTTLEFC--V 216

Query:   221 RALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCPSSRHIGSGLNFRTA 273
                W  EKG       YDLG+ EN   VLG NI  W+ P  +  G+GL ++TA
Sbjct:   217 TGQW--EKGNI-----YDLGVEENFKQVLGDNILLWIFPLGKPKGNGLFYKTA 262

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q8IJC5 PF10_0273 "DHHC-type zinc finger protein, putative" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 77/233 (33%), Positives = 114/233 (48%)

Query:    41 GLMNAIVFTAVALMCVFSYTVAILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQK 100
             G    + F  + L+ ++S+      +PG +P +Y   V+ +   + E + K G+LRYC  
Sbjct:    42 GYTKLLTFHILLLLLIWSFYKTYKVNPGNIPDNYEWKVDPNIGRIKE-REKTGELRYCIH 100

Query:   101 CSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLV 160
                YKP R+H+CR  ++ VL+MDH+C W++NCVG  NYK F + + YA + C+Y  +   
Sbjct:   101 EKKYKPDRSHYCRAIEKNVLKMDHYCPWVANCVGFYNYKFFLLSLFYANICCLYVNINCY 160

Query:   161 GSLTNDSLEDELQTGGSFRTAYVIXXXXXXXXXXXXXXXXGWHIYLIFHNKTTIEYHEGV 220
              S  N      +     F     I                 +HIYL   N TT+E+   V
Sbjct:   161 TSFPNFYSNPNILFNEVFYLFLEIVLASVILIIIFPFFL--FHIYLTSKNYTTLEFC--V 216

Query:   221 RALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCPSSRHIGSGLNFRTA 273
                W  EKG       YDLG+ EN   VLG NI  W+ P  +  G+GL ++TA
Sbjct:   217 TGQW--EKGNI-----YDLGVEENFKQVLGDNILLWIFPLGKPKGNGLFYKTA 262

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2134643 AT4G00840 [Arabidopsis thaliana (taxid:3702)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 74/229 (32%), Positives = 108/229 (47%)

Query:    35 GLMSSPGLMNAIVFTAVALMCVFSYTVAILRDPGRVPADYMPDVED-DQNPMHEIKRKG- 92
             G +S+   +   VF  + +M ++SY   +  DPG VP  +  ++   D         +G 
Sbjct:    47 GALSALAALIIFVFHFLLIMLLWSYFTTVFTDPGSVPEHFRREMGGGDSLEAGTSTDQGA 106

Query:    93 -GDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVA 151
              G L YC KC + KPPR HHC VC+RCVL+MDHHC+WI NCVG  NYK F +F+ Y  + 
Sbjct:   107 FGSLGYCTKCRNVKPPRCHHCSVCQRCVLKMDHHCVWIVNCVGARNYKFFLLFLFYTFLE 166

Query:   152 CIYSMVLLVGSLTNDSLEDELQTGGSFRTA-YVIXXXXXXXXXXXXXXXXGWHIYLIFHN 210
              +  +++L+ S      +    +    + A  V+                  HI L+  N
Sbjct:   167 TMLDVIVLLPSFIEFFSQAIKHSSSPGKLASLVLAFVLNFAFVLSLLCFVVMHISLLSSN 226

Query:   211 KTTIEYHEGVRALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCP 259
              T++E HE         K G V +  YDLG  +N   V G     W+ P
Sbjct:   227 TTSVEVHE---------KNGEV-RWKYDLGKKKNFEQVFGKKKAFWLLP 265

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2132654 AT4G22750 [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 74/220 (33%), Positives = 106/220 (48%)

Query:    51 VALMCVFSYTVAILRDPGRVPADYMP--DVEDDQNPMHEIKRKG-GD-----LRYCQKCS 102
             + +M ++SY   ++ DPG VP  + P  D+E  +     I     GD     +RYC+KC+
Sbjct:    85 ILIMLLWSYFSVVVTDPGGVPTGWRPELDIEKSEGNQALIGEASVGDSSSHGVRYCRKCN 144

Query:   103 HYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVV-ACIYSMVLLVG 161
              YKPPR+HHC VC RC+L+MDHHC+W+ NCVG  NYK F +F+ Y  +   + ++ LL  
Sbjct:   145 QYKPPRSHHCSVCGRCILKMDHHCVWVVNCVGANNYKSFLLFLFYTFLETTVVAVSLLPI 204

Query:   162 SLT--NDSLEDELQTGGSFRTAYVIXXXXXXXXXXXXXXXXGWHIYLIFHNKTTIEYHEG 219
              L   +D   D   + GS   ++V                   HI L+  N TTIE +E 
Sbjct:   205 FLVFFSDGDGDITVSPGSLAASFVAFVLNIAFALSVLGFLI-MHIMLVARNTTTIEAYEK 263

Query:   220 VRALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCP 259
                 W           PY++G   N   V G +   W  P
Sbjct:   264 HTVNW-----------PYNVGRKTNFEQVFGSDKMYWFVP 292

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

TAIR|locus:2101806 AT3G60800 "AT3G60800" [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 78/238 (32%), Positives = 118/238 (49%)

Query:    35 GLMSSPGLMNAIVFTAVALMCVFSYTVAILRDPGRVPADYMPDVEDDQ---NPMHEIKRK 91
             GL S   L   I+F  +  M ++SY   +  DPG VP ++ P  ++++   +P++ +   
Sbjct:    54 GLDSLAALTILILFHFLLAMLLWSYFSVVFTDPGVVPPNWRPSTDEERGESDPLNSLDFV 113

Query:    92 G--GD-------LRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFF 142
             G   D       +R+C+KC+  KP R HHC VC RCVL+MDHHC+W+ NCVG  NYK F 
Sbjct:   114 GLQSDSSSSNPRVRFCRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFL 173

Query:   143 IFVLYAVV-ACIYSMVLLVGSLTNDSLEDELQTGGSFRTAYVIXXXXXXXXXXXXXXXXG 201
             +F+ Y  +   + ++VL+   +   S E+   T G+  T ++                  
Sbjct:   174 LFLFYTFLETTLVTLVLMPHFIAFFSDEEIPGTPGTLATTFLAFVLNLAFALSVMGFLI- 232

Query:   202 WHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIFENLTSVLGPNIFSWVCP 259
              HI L+  N TTIE +E        +K  T  K  YDLG  +N   V G +   W+ P
Sbjct:   233 MHISLVAGNTTTIEAYE--------KK--TTTKWRYDLGKKKNFEQVFGMDKRYWLIP 280

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

DICTYBASE|DDB_G0293930 DDB_G0293930 "putative palmitoyltransferase" [Dictyostelium discoideum (taxid:44689)]

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 64/199 (32%), Positives = 99/199 (49%)

Query:    57 FSYTVAILRDPGRVP--ADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRV 114
             F+Y + I+  PG  P  +DY  +   +   +  IKR     R+C  C   K  R HHC++
Sbjct:    93 FNYALTIITSPGHPPRESDYSEEKIIEFKSIKTIKRSE-TYRFCIHCRLPKEERTHHCQL 151

Query:   115 CKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQT 174
             C  CVL+MDHHC W++NCVG  N++ F +F++Y  ++C+Y  +L    + N         
Sbjct:   152 CGTCVLKMDHHCPWVNNCVGANNHRYFMLFLVYLWISCVYVCILSYPHVFNSE------- 204

Query:   175 GGSFRTAYVIXXXXXXXXXXXXXXXXGWHIYLIFHNKTTIEY-HEGVRALWLAEKGGTVY 233
              G    + ++                GW IYLI  N+TTIE+ H   ++   A+  G +Y
Sbjct:   205 SGYIPFSMLMSFVITLTIAFALGGLLGWQIYLILSNQTTIEFLHNRTQSK-KAKARGEIY 263

Query:   234 KHPYDLGIFENLTSVLGPN 252
             K+PYD G+ +N       N
Sbjct:   264 KNPYDFGVLQNFKQFFKAN 282

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

ASPGD|ASPL0000047879 AN1565 [Emericella nidulans (taxid:162425)]

 Score = 256 (95.2 bits), Expect = 5.6e-27, Sum P(2) = 5.6e-27
 Identities = 47/105 (44%), Positives = 63/105 (60%)

Query:    51 VALMCVF-SYTVAILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRA 109
             +  +C++  Y  A   DPG VP  +MP    D+  + +  R  G  R+C++C  YKPPRA
Sbjct:    49 ILAICIWICYYRACTVDPGHVPKGWMPS---DRERL-KADRASGRQRWCRRCEAYKPPRA 104

Query:   110 HHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIY 154
             HHC+ C+RCV +MDHHC W SNCV H  +  F  F+ YAVV   Y
Sbjct:   105 HHCKTCERCVPKMDHHCPWTSNCVSHFTFPHFARFLFYAVVGIAY 149

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

DICTYBASE|DDB_G0279395 DDB_G0279395 "DHHC-type zinc finger-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 206 (77.6 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
 Identities = 30/55 (54%), Positives = 38/55 (69%)

Query:    96 RYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVV 150
             R+C +C  +KPPR HHC+ CKRC+L+ DHHC WI NC G  N K F  F+ Y V+
Sbjct:   129 RFCSQCCAFKPPRTHHCKQCKRCILKHDHHCPWIGNCTGFRNQKFFIQFLFYVVI 183

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q93VV0	ZDHC6_ARATH	2, ., 3, ., 1, ., -	0.7198	0.9929	0.9860	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.3.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00060738 hypothetical protein (283 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	284
pfam01529	167	pfam01529, zf-DHHC, DHHC palmitoyltransferase	2e-44
COG5273	309	COG5273, COG5273, Uncharacterized protein containi	2e-29
COG0603	222	COG0603, COG0603, Predicted PP-loop superfamily AT	0.003

>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase

 Score =  147 bits (373), Expect = 2e-44
 Identities = 63/163 (38%), Positives = 88/163 (53%), Gaps = 2/163 (1%)

Query: 56  VFSYTVAILRDPGRVPADYMPDVED-DQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRV 114
           ++SY   I  DPG VP +     ++   +   E   +  +L++C  C+  KPPR+HHCRV
Sbjct: 1   LWSYFKTIFTDPGYVPKNPTEKEQEKQPDEESEEGDEEDELKFCSTCNIIKPPRSHHCRV 60

Query: 115 CKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQT 174
           C RCVLR DHHC W++NC+G  N+K F +F+LY  +  I  +VL    L       EL  
Sbjct: 61  CNRCVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYLILLLVLSFYYLVYLIRNIELFF 120

Query: 175 GGSFRTAYVISGLLL-VPLSVALSVLLGWHIYLIFHNKTTIEY 216
                    I  L+L +   + LS LL +H+YLI  N TT EY
Sbjct: 121 FLILSLFSSIILLVLSLFFLLFLSFLLFFHLYLILKNITTYEY 163

This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

 Score =  112 bits (283), Expect = 2e-29
 Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 14/215 (6%)

Query: 9   LPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVAILRDPG 68
           + + ++   + Y     V         +         I+F  + ++  FSY + ++ DPG
Sbjct: 32  IGLFLLSRIVVYTLLVIVKSLSLVVLFI---------ILFIVILVLASFSYLLLLVSDPG 82

Query: 69  RVPAD-YMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCI 127
            +  +  +    +  + + +   K G   +C  C+ YKPPR+HHC +C RCVL+ DHHC 
Sbjct: 83  YLGENITLSGYRETISRLLDDG-KFGTENFCSTCNIYKPPRSHHCSICNRCVLKFDHHCP 141

Query: 128 WISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAYVIS-G 186
           WI+NCVG  NY+ F+ F+LY ++  +  +VLL  +     +              +    
Sbjct: 142 WINNCVGFRNYRFFYQFLLYTILVAL--VVLLSTAYYIAGIFSIRHDTSLAICFLIFGCS 199

Query: 187 LLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVR 221
           LL V   +  ++LL + IYLI +N TTIE+ +  R
Sbjct: 200 LLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISR 234

Length = 309

>gnl|CDD|223676 COG0603, COG0603, Predicted PP-loop superfamily ATPase [General function prediction only]

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 2/39 (5%)

Query: 85  MHEIKRKGGDLRYCQKCSH--YKPPRAHHCRVCKRCVLR 121
             EI +   +L    + +   Y      HC  C+ CVLR
Sbjct: 166 KAEIVKLADELGVPLELTWSCYNGGEGDHCGECESCVLR 204

Length = 222

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	284
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	100.0
KOG1314	414	consensus DHHC-type Zn-finger protein [General fun	100.0
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	100.0
KOG1313	309	consensus DHHC-type Zn-finger proteins [General fu	100.0
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	100.0
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	100.0
KOG1312	341	consensus DHHC-type Zn-finger proteins [General fu	100.0
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.97
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	95.08
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	93.91
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	93.67
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	92.46
PRK04136	48	rpl40e 50S ribosomal protein L40e; Provisional	89.49
PF13240	23	zinc_ribbon_2: zinc-ribbon domain	89.14
PTZ00303	1374	phosphatidylinositol kinase; Provisional	86.95
PF13248	26	zf-ribbon_3: zinc-ribbon domain	83.38
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	80.2

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=1.2e-54  Score=382.07  Aligned_cols=259  Identities=36%  Similarity=0.677  Sum_probs=204.8

Q ss_pred             chhHHHHHHHhhhhheeeeeeeecccccccchhhHHHHHHHHHHHHHHHHHHhHHhhcCCCCCCCCCCCCCccCCCchhH
Q 023322            8 SLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVAILRDPGRVPADYMPDVEDDQNPMHE   87 (284)
Q Consensus         8 ~lp~~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~dPG~~p~~~~~~~~~~~~~~~~   87 (284)
                      ++|+.++..++++.||+.++...-++.... ....+..+++.++.++..|+|++++++|||.+|..+.++.++++....+
T Consensus        13 ~~~~~~i~~~~~~~yy~~v~~~c~~~i~~~-~~~~~~ll~~~~ll~m~~~sy~~~vf~~pg~vp~~~~~~~~~~~~~~~~   91 (307)
T KOG1315|consen   13 WIPVLIILLVIGWTYYVYVAVLCILSISLT-IPSVLLLLLFHLLLIMFLWSYFRTVFTDPGRVPDSYRPSVEDEDSLENG   91 (307)
T ss_pred             chhheeeeeeEEEEEEEeehhhhHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHheeEecCCCCccccCCCcCcccccccc
Confidence            789999999999999988887777665543 4566778899999999999999999999999999888776655432221


Q ss_pred             h----------hhcCCccccccccCcccCCCCCCCcccCccccCCcccCcccccccCCcchHHHHHHHHHHHHHHHHHHH
Q 023322           88 I----------KRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMV  157 (284)
Q Consensus        88 ~----------~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N~~~Fi~fl~~~~~~~~~~~~  157 (284)
                      .          ...++..|+|.+|+.+||+||||||+|+|||+||||||||+|||||.+|||+|++|++|..+.+++.++
T Consensus        92 ~~~~~~~~~~~~~~~g~~R~C~kC~~iKPdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~NyKfF~lfl~y~~l~~~~~lv  171 (307)
T KOG1315|consen   92 SDNERDLPGYTRTSDGAVRYCDKCKCIKPDRAHHCSVCNRCVLKMDHHCPWINNCVGFRNYKFFLLFLFYTNLYSIYVLV  171 (307)
T ss_pred             CcccccceeeEecCCCCceeecccccccCCccccchhhhhhhhccccCCcceeceecccchHHHHHHHHHHHHHHHHHHH
Confidence            1          223457899999999999999999999999999999999999999999999999999999999988888


Q ss_pred             HHHHHHhhcccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHHhhhhhHHHHHhCCCcccCCC
Q 023322          158 LLVGSLTNDSLEDELQTGGSFRTAYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPY  237 (284)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~h~~li~~n~Tt~E~~~~~~~~~~~~~~~~~~~npy  237 (284)
                      .....+......+ ..........++++.++.+.+++.+++|+.+|++||++|+||+|.++....     ..+....+.|
T Consensus       172 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~f~i~l~~~l~~h~~Li~~N~TTiE~~~~~~~-----~~~~~~~~~~  245 (307)
T KOG1315|consen  172 TTLIGFTKYFQGG-AGPSSLLLFFIVFLFLVAIAFSISLSGLLCFHTYLILKNKTTIEAYKSPVF-----RSGLHNKNGF  245 (307)
T ss_pred             HHHHHHHHHHhcc-ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhccccc-----cccccccCCc
Confidence            8777665544221 111222334445555666777788888999999999999999999876411     2222345667


Q ss_pred             ChhHHHHHHhhcCCCceeeeecCCCCCCCCeEEeeccc
Q 023322          238 DLGIFENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYH  275 (284)
Q Consensus       238 d~G~~~N~~~vfG~~~~~W~~P~~~~~~dG~~~~~~~~  275 (284)
                      ++  ..|++|+||+++..|++|.....+||.+++.+.+
T Consensus       246 ~~--~~n~~~vfg~~~~~wl~P~~~s~~~~~~~~~~~~  281 (307)
T KOG1315|consen  246 NL--YVNFREVFGSNLLYWLLPIDSSWGDGVSFPLRGD  281 (307)
T ss_pred             ce--eecHHHHhCCCceEEeccccCccccCcccccccc
Confidence            66  8899999999999999998777777777766544

>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=1.2e-50  Score=351.85  Aligned_cols=258  Identities=32%  Similarity=0.515  Sum_probs=184.0

Q ss_pred             CcccchhHHHHHHHhhhhheeeeeeeecccccccchhhHHHHHHHHHHHHHHHHHHhHHhhcCCCCCCCCCCCCCccCCC
Q 023322            4 GFTFSLPVSVVVLAIFYIYFTTVFIFIDRWFGLMSSPGLMNAIVFTAVALMCVFSYTVAILRDPGRVPADYMPDVEDDQN   83 (284)
Q Consensus         4 ~~~~~lp~~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~dPG~~p~~~~~~~~~~~~   83 (284)
                      |.+.+-|+..+.++......+ .+.-...|....+..++.+.+.|.+...+++++|+.+++++||++|..|.|+...++ 
T Consensus        11 r~~hwGpi~alsiit~i~~~~-~~~n~lww~p~ss~~g~~n~i~f~~~~~m~~~ny~~A~~~gPG~vp~~wkPe~~~D~-   88 (414)
T KOG1314|consen   11 RFLHWGPITALSIITIITSTT-GYMNSLWWFPLSSFLGVPNQITFLLWTSMILYNYFNAIFTGPGFVPLGWKPENPKDE-   88 (414)
T ss_pred             heeccccHHHHHHHHHHHHHH-HHhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCChhH-
Confidence            334444776664433322221 122122344456667888889999999999999999999999999999998765542 


Q ss_pred             chhHhhhcCCccccccccCcccCCCCCCCcccCccccCCcccCcccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023322           84 PMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSL  163 (284)
Q Consensus        84 ~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N~~~Fi~fl~~~~~~~~~~~~~~~~~~  163 (284)
                               ...+||.+|+.+|+||||||+.|||||.+|||||||+|||||..||.+|+.||++..++|+-+.++....+
T Consensus        89 ---------~~lqfCk~CqgYKapRSHHCrkCnrCvmkMDHHCPWinnCVG~aNh~~F~~FLlf~ivG~ih~tiI~~~~~  159 (414)
T KOG1314|consen   89 ---------MFLQFCKKCQGYKAPRSHHCRKCNRCVMKMDHHCPWINNCVGWANHAYFLRFLLFSIVGCIHGTIILVCAQ  159 (414)
T ss_pred             ---------HHHHHHhhccCcCCCccccchHHHHHHHhhccCCcchhhcccccccHHHHHHHHHHHHhcccceeeehhHH
Confidence                     13589999999999999999999999999999999999999999999999999999998765554433322


Q ss_pred             hhcccc-------cccccCCchhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHHhhhhhHHHH----Hh
Q 023322          164 TNDSLE-------DELQTGGSFRTA----YVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLA----EK  228 (284)
Q Consensus       164 ~~~~~~-------~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~l~~~h~~li~~n~Tt~E~~~~~~~~~~~----~~  228 (284)
                      +..+..       ........+...    .++..-+++++.++++.|++.|+..|++|+|.+|.+..+++....    ..
T Consensus       160 ~~~Iy~~W~~~~g~~hlp~v~ft~~~li~~vfslgla~gv~la~t~Lf~~qlk~Il~nrt~IE~wi~~Ka~~rr~~~~~d  239 (414)
T KOG1314|consen  160 YRGIYFRWYIKYGLRHLPIVFFTLSSLIALVFSLGLAIGVVLALTMLFFIQLKQILNNRTGIESWIVEKAMDRREYYFND  239 (414)
T ss_pred             HHHHHHHHHhhcccccCceeeccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHhhccC
Confidence            221110       001111111111    122222335567788899999999999999999998744332222    22


Q ss_pred             CCCcccCCCChhHHHHHHhhcCCCceeeeecCCCCCCCCeEEeeccccccCC
Q 023322          229 GGTVYKHPYDLGIFENLTSVLGPNIFSWVCPSSRHIGSGLNFRTAYHNAVGA  280 (284)
Q Consensus       229 ~~~~~~npyd~G~~~N~~~vfG~~~~~W~~P~~~~~~dG~~~~~~~~~~~~~  280 (284)
                      ...++..|||+||+.|+++||-.+.        .+.|||++||..++....+
T Consensus       240 ~~~~f~ypydlgWr~n~r~vf~~~~--------~~~gdg~~wPv~~gc~qyt  283 (414)
T KOG1314|consen  240 DEGEFTYPYDLGWRINLREVFFQNK--------KEEGDGIEWPVVEGCVQYT  283 (414)
T ss_pred             CCCceeeeccccccccHHHHhhhcc--------ccCCCCccccccCcccccc
Confidence            2245789999999999999996542        4689999999998887654

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=2.3e-45  Score=329.64  Aligned_cols=206  Identities=32%  Similarity=0.603  Sum_probs=149.2

Q ss_pred             cCCCCCCCCCCCCCccC-C---CchhHhhhcCCccccccccCcccCCCCCCCcccCccccCCcccCcccccccCCcchHH
Q 023322           65 RDPGRVPADYMPDVEDD-Q---NPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKV  140 (284)
Q Consensus        65 ~dPG~~p~~~~~~~~~~-~---~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N~~~  140 (284)
                      +|||.+|++..+..+.. +   .+..+.++...+.+||.+|+.+||||||||++||+||+||||||||+|||||++|||+
T Consensus        79 sdpg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~  158 (299)
T KOG1311|consen   79 SDPGIVPRADDEQIEDPERAPLYKNVDVNGIQVEWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRY  158 (299)
T ss_pred             CCCceecCcccCCCCCccccccCCCcccCCcccceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHH
Confidence            49999998532222211 1   1112223334568999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccccc----cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhH
Q 023322          141 FFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQ----TGGSFRTAYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEY  216 (284)
Q Consensus       141 Fi~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~l~~~h~~li~~n~Tt~E~  216 (284)
                      |+.|+++..+++++.++.....+.....+....    .........++++++.+.....++.|+.+|++++.+|+||+|+
T Consensus       159 F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~fh~~li~~~~Tt~e~  238 (299)
T KOG1311|consen  159 FVLFLFYLALGVLLALAFLFYELLQRADNLKVNLTPVLIPAGTFLSALLGLLSALFLAFTSALLCFHIYLIKSGSTTYES  238 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhheeeEecCcchhhh
Confidence            999999999999998888776654422211111    1111222333444444556666778999999999999999998


Q ss_pred             HhhhhhHHHHHhCCCcccCCCChhHHHHHHhhcCCC-ceeeeecCC---CCCCCCeEEeecccccc
Q 023322          217 HEGVRALWLAEKGGTVYKHPYDLGIFENLTSVLGPN-IFSWVCPSS---RHIGSGLNFRTAYHNAV  278 (284)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~npyd~G~~~N~~~vfG~~-~~~W~~P~~---~~~~dG~~~~~~~~~~~  278 (284)
                      .++.+        .+...+|||.|.++|++++||.+ ...|+.|..   +.+.||..++.....+.
T Consensus       239 ~~~~~--------~~~~~~~~~~g~~~n~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~  296 (299)
T KOG1311|consen  239 IKSLD--------FVSRSNPYDLGLLKNLQEVFGGPLPLSWLSPFARSGPLPHDGEGGPPTPHVSI  296 (299)
T ss_pred             hhccc--------cccccCCCchhHHHHHHHHhCCCCCcccccccccCCCCCCCCCCCCccccccc
Confidence            87511        11114899999999999999985 578999976   35678877776655444

>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=8.8e-42  Score=288.09  Aligned_cols=178  Identities=30%  Similarity=0.544  Sum_probs=133.4

Q ss_pred             cccccccCcccCCCCCCCcccCccccCCcccCcccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-
Q 023322           95 LRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQ-  173 (284)
Q Consensus        95 ~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N~~~Fi~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  173 (284)
                      ..+|.+|..+||||+||||.|||||+||||||||+|||||..|||||++|++|+.+++.|..++..+.........+.. 
T Consensus       102 ~SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NHryFFlFl~~ltlat~~~~i~~~~~w~~~le~~~~~t  181 (309)
T KOG1313|consen  102 DSFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNHRYFFLFLFYLTLATSYAAIMCVYTWIDHLEPIEEIT  181 (309)
T ss_pred             ccHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence            3899999999999999999999999999999999999999999999999999999999998887665444332211110 


Q ss_pred             --------cCCchh----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHHhhhhhHHHHHhCCCcccC
Q 023322          174 --------TGGSFR----------TAYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKH  235 (284)
Q Consensus       174 --------~~~~~~----------~~~~i~~~~~~~~~~~~~~l~~~h~~li~~n~Tt~E~~~~~~~~~~~~~~~~~~~n  235 (284)
                              ...+..          ...+-+.+++..+.++++.+..+|.++|.+|.|++|++.....++.....  ...|
T Consensus       182 ay~~d~~h~~Pp~~i~r~~~~i~~t~~~~~~fls~~~lv~vg~l~~W~~vlI~~G~tsi~~~~~~~e~k~~~a~--~R~~  259 (309)
T KOG1313|consen  182 AYASDVAHVAPPPSILRVYKNITRTSIANLWFLSVRVLVAVGLLTAWHAVLISRGETSIEQLINIKERKRYLAH--LRSN  259 (309)
T ss_pred             cccCcccccCCChhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheeeehhhhhHHHHHHHHHhHhHHHh--ccCC
Confidence                    000111          11122333445567788999999999999999999998765443222222  2379


Q ss_pred             CCChhHHHHHHhhcCC--Cceee---eecCC-CCCCCCeEEeecc
Q 023322          236 PYDLGIFENLTSVLGP--NIFSW---VCPSS-RHIGSGLNFRTAY  274 (284)
Q Consensus       236 pyd~G~~~N~~~vfG~--~~~~W---~~P~~-~~~~dG~~~~~~~  274 (284)
                      |++.|.++||+.++|-  .+-.|   ++|.. ++.+.|..+++++
T Consensus       260 ~~n~g~k~nWr~fLg~~~~r~~wk~v~lPt~~~p~~~~~~~~~~d  304 (309)
T KOG1313|consen  260 PTNFGGKANWRNFLGLFRGRHFWKTVLLPTIRKPVKYGDSKEKSD  304 (309)
T ss_pred             CcccchHHHHHHhhccccCCceeEEEeccccccccccCCcccccc
Confidence            9999999999999984  33244   78976 6788888888543

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=100.00  E-value=1.8e-41  Score=281.46  Aligned_cols=163  Identities=34%  Similarity=0.686  Sum_probs=119.8

Q ss_pred             HHHhHHhhcCCCCCCCCCCCCCc-cCC-------CchhHhhhcCCccccccccCcccCCCCCCCcccCccccCCcccCcc
Q 023322           57 FSYTVAILRDPGRVPADYMPDVE-DDQ-------NPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIW  128 (284)
Q Consensus        57 ~~~~~~~~~dPG~~p~~~~~~~~-~~~-------~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHHC~w  128 (284)
                      ++|++++++|||++|+....+.+ .++       .......+..++.++|.+|+..||+|||||+.||+||+||||||+|
T Consensus         2 ~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~w   81 (174)
T PF01529_consen    2 WSYFLTIFIDPGYVPRSNPDEDQRQEEKEEEQNQSIDSPEDDENGELKYCSTCKIIKPPRSHHCRVCNRCVLRFDHHCPW   81 (174)
T ss_pred             EEehhhheECCcccCCccccccccccccccccchhhhhhccccCCCCEECcccCCcCCCcceeccccccccccccccchh
Confidence            57889999999999986111111 000       0111122334578999999999999999999999999999999999


Q ss_pred             cccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCchhHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023322          129 ISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTA-YVISGLLLVPLSVALSVLLGWHIYLI  207 (284)
Q Consensus       129 i~nCIG~~N~~~Fi~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~l~~~h~~li  207 (284)
                      +|||||++|||+|++|+++..+++++.....+..+.................. .+++.++.+.++++++.++++|++++
T Consensus        82 ~~~cIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  161 (174)
T PF01529_consen   82 LGNCIGRRNHRYFLLFLLYLCLYCLYFFILSLYYLVRYIPSISFSSFWIFSNFSSIFLLIISIFFFIFVGFLLIFQLYLI  161 (174)
T ss_pred             hccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998888777666553332221111111111 13333344556677889999999999


Q ss_pred             hhCcchhhHHhh
Q 023322          208 FHNKTTIEYHEG  219 (284)
Q Consensus       208 ~~n~Tt~E~~~~  219 (284)
                      ++|+||+|.+++
T Consensus       162 ~~n~Tt~E~~~~  173 (174)
T PF01529_consen  162 LRNITTYERIKR  173 (174)
T ss_pred             HcCCcHHHHHHc
Confidence            999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=100.00  E-value=5.4e-40  Score=293.16  Aligned_cols=229  Identities=31%  Similarity=0.572  Sum_probs=159.4

Q ss_pred             HHHHHHHHHHHHHHHHhHHhhcCCCCCCCCCCCCCccCCCchhHhhhcCCccccccccCcccCCCCCCCcccCccccCCc
Q 023322           44 NAIVFTAVALMCVFSYTVAILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMD  123 (284)
Q Consensus        44 ~~~~~~~l~~~~~~~~~~~~~~dPG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~D  123 (284)
                      ..+.+.+...++..+|+..+++|||..+++.....-++..+..-..++.+..++|.+|+.+||+|||||+.|||||+|||
T Consensus        58 ~~i~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~KP~RS~HC~~Cn~CV~k~D  137 (309)
T COG5273          58 FIILFIVILVLASFSYLLLLVSDPGYLGENITLSGYRETISRLLDDGKFGTENFCSTCNIYKPPRSHHCSICNRCVLKFD  137 (309)
T ss_pred             hhhhhhhhhhhHHHhhHHHhhcCCCccCccccccchhhhhhhhhhcCccccceeccccccccCCCCccchhhcchhhccC
Confidence            34455556667889999999999999985432211111111111233456789999999999999999999999999999


Q ss_pred             ccCcccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCchhH-HHHHH--HHHHHHHHHHHHHHH
Q 023322          124 HHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRT-AYVIS--GLLLVPLSVALSVLL  200 (284)
Q Consensus       124 HHC~wi~nCIG~~N~~~Fi~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~--~~~~~~~~~~~~~l~  200 (284)
                      |||||+|||||.+|||+|++|++++....+..+......+......    ....... ..++.  ....+.+++.+..++
T Consensus       138 HHC~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~~~~~~~~f~~~~~~~  213 (309)
T COG5273         138 HHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIFSI----RHDTSLAICFLIFGCSLLGVVFFIITTLLL  213 (309)
T ss_pred             ccCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc----cCChHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence            9999999999999999999999999877776666655444332111    1111111 22222  233344566778889


Q ss_pred             HHHHHHHhhCcchhhHHhhhhhHHHHH------hC---------CCcccCCCChhHHHHHHhhcCCCceeeeecCCCCCC
Q 023322          201 GWHIYLIFHNKTTIEYHEGVRALWLAE------KG---------GTVYKHPYDLGIFENLTSVLGPNIFSWVCPSSRHIG  265 (284)
Q Consensus       201 ~~h~~li~~n~Tt~E~~~~~~~~~~~~------~~---------~~~~~npyd~G~~~N~~~vfG~~~~~W~~P~~~~~~  265 (284)
                      .++.+++..|+|++|..+..|.....+      ..         ..+...|++.|.-+|++.++|.+...|..|......
T Consensus       214 ~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  293 (309)
T COG5273         214 LFLIYLILNNLTTIEFIQISRGGSTLEFFPLCRESNLPFTNIFDSSEGALPLDLGIGQNLSTIKGSNALYWLTPLHTNYC  293 (309)
T ss_pred             HHHHHHHHhhHHHHHHHHhccceecccccchhccCCcCceeccCCCccccccccCccccceeecCCCceeeccccccCCC
Confidence            999999999999999987655432211      01         112346889999999999999999999999653335


Q ss_pred             CCeEEeecccc
Q 023322          266 SGLNFRTAYHN  276 (284)
Q Consensus       266 dG~~~~~~~~~  276 (284)
                      .+..|+.+.+.
T Consensus       294 ~~~~~~~~~~~  304 (309)
T COG5273         294 NSYDFSLRSDT  304 (309)
T ss_pred             CccCcccchhh
Confidence            56666655443

>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=8.3e-33  Score=234.90  Aligned_cols=174  Identities=26%  Similarity=0.409  Sum_probs=108.9

Q ss_pred             HHHHHHHHHHHHHHHHHhHHhhcCCCCCCCCCCCCCccCCCchhHhhhcCCccccccccCcccCCCCCCCcccCccccCC
Q 023322           43 MNAIVFTAVALMCVFSYTVAILRDPGRVPADYMPDVEDDQNPMHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRM  122 (284)
Q Consensus        43 ~~~~~~~~l~~~~~~~~~~~~~~dPG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~  122 (284)
                      .+.+.-..+.++-.+++..++.+|||.+.+......-+..+.+..+-   .....|+||+..||+||||||.|||||.||
T Consensus        99 ~~~il~~l~vivp~i~f~ltc~snpg~i~k~n~s~~~~~ypYDy~if---~k~~kCSTCki~KPARSKHCsiCNrCV~rf  175 (341)
T KOG1312|consen   99 HYLILPYLLVIVPLIFFTLTCGSNPGIITKANESLFLHVYPYDYVIF---PKNVKCSTCKIRKPARSKHCSICNRCVHRF  175 (341)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhcCCCCccchhhhccceeccCccceee---cCCCccccccCCCccccccchHHHHHHHHh
Confidence            33333334445557778899999999997642211111100011111   122789999999999999999999999999


Q ss_pred             cccCcccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc--------c--CCchh-HHHHHHHHHH--
Q 023322          123 DHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQ--------T--GGSFR-TAYVISGLLL--  189 (284)
Q Consensus       123 DHHC~wi~nCIG~~N~~~Fi~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~~~~-~~~~i~~~~~--  189 (284)
                      ||||.|+|||||++|.|||++|+++...++.++.+-..........+....        .  .+... .-.++.++.-  
T Consensus       176 DHHCiWiNNCIG~~N~ryF~lFLL~~i~l~~yaivrlgfi~ln~~sdl~q~v~ilt~~~g~~ks~~~L~~yl~la~~~~v  255 (341)
T KOG1312|consen  176 DHHCIWINNCIGAWNIRYFLLFLLTLISLATYAIVRLGFIVLNVMSDLYQEVYILTLGHGHVKSTVFLIQYLFLAFPRIV  255 (341)
T ss_pred             ccceEeeecccccchHHHHHHHHHHHHHHHHHHHHHHHheehhhccccchheeeeeeeecchhhHHHHHHHHHHHhccce
Confidence            999999999999999999999999997777776655443322222211111        0  00000 0011111100  


Q ss_pred             -----HHHHHHHHHHHHHHHHHHhhCcchhhHHhh
Q 023322          190 -----VPLSVALSVLLGWHIYLIFHNKTTIEYHEG  219 (284)
Q Consensus       190 -----~~~~~~~~~l~~~h~~li~~n~Tt~E~~~~  219 (284)
                           ....-+++.-..+-.++..+|+||.|...+
T Consensus       256 ~~l~~~~~~~~~~~Y~~f~~y~~~t~~~~~~W~~~  290 (341)
T KOG1312|consen  256 FMLGFVVVLSFLGGYLLFVLYLAATNQTTNEWYRG  290 (341)
T ss_pred             eeeehhhhhhHhHHHHHHHHHHHhccCCchhhhcc
Confidence                 111223455666778889999999998776

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.97  E-value=1.8e-32  Score=255.61  Aligned_cols=191  Identities=25%  Similarity=0.426  Sum_probs=128.1

Q ss_pred             HHHHHHHHhHHhhcCCCCCCCCCCCCCccCCCchhHhhhc--CCcc-ccccccCcccCCCCCCCcccCccccCCcccCcc
Q 023322           52 ALMCVFSYTVAILRDPGRVPADYMPDVEDDQNPMHEIKRK--GGDL-RYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIW  128 (284)
Q Consensus        52 ~~~~~~~~~~~~~~dPG~~p~~~~~~~~~~~~~~~~~~~~--~~~~-~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHHC~w  128 (284)
                      .+..++++.++..+|||++|.+....    +....+..+.  -+.. ++|.+|.+.||.|||||++|||||.||||||||
T Consensus       378 ~l~~~~~f~~~~rsDPg~i~~~~~~~----~~tIs~l~d~gkf~~en~FC~~clirKp~rSkhc~vcnrcVarfDHhCPw  453 (600)
T KOG0509|consen  378 VLAYFITFGLFLRSDPGFIPTSTEVG----RETISQLIDFGKFDLENRFCLTCLIRKPLRSKHCSVCNRCVARFDHHCPW  453 (600)
T ss_pred             HHHHHHHHHHHhccCCCCCCCchhhH----HHHHHHhhccccccccccceeeeeeecCCccchhhhhHHHHhccccCCCc
Confidence            34456667777789999999753222    1111111111  1223 799999999999999999999999999999999


Q ss_pred             cccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCchhHHHHHHHHHHHH--HH------------H
Q 023322          129 ISNCVGHANYKVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQTGGSFRTAYVISGLLLVP--LS------------V  194 (284)
Q Consensus       129 i~nCIG~~N~~~Fi~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~------------~  194 (284)
                      ++||||.+|||+|+.|++.+...+.+.+.....++... .+.    .......+..+..+..+  +.            -
T Consensus       454 i~ncVG~kNh~~F~~Fl~~l~~~~~~~l~~~~~y~~~~-~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~n~~~~~t~  528 (600)
T KOG0509|consen  454 IGNCVGLKNHRLFVFFLLTLLTVIVFYLYLCLYYIMNL-ENA----STIYVGFLIAVQAFRIPKPVTGNLLGNEDLNPTW  528 (600)
T ss_pred             cccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chh----HHHHHHHHHHHHHHhCCccceeeeeecccccccc
Confidence            99999999999999999998888777776665554321 110    01111111111111110  00            0


Q ss_pred             HHHHHHHHHHHHHhhCcchhhHHhhhhhHHHHHhCCCcccCCCChhHHHHHHhhcCCC
Q 023322          195 ALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGGTVYKHPYDLGIFENLTSVLGPN  252 (284)
Q Consensus       195 ~~~~l~~~h~~li~~n~Tt~E~~~~~~~~~~~~~~~~~~~npyd~G~~~N~~~vfG~~  252 (284)
                      ..+..-..|...++.+.||+|+++..|++....+.+. .++|++.|+.+|+.+++=.+
T Consensus       529 ~~~~~~~~~~~~~c~~~tt~e~~n~~r~~~~~~~~~~-~~~~~s~g~~~Nl~df~~~~  585 (600)
T KOG0509|consen  529 GSTSTKCQHYNCACLHLTTNEQINVKRYEHLGIKRGP-TRSPFSPGPIRNLVDFFLCS  585 (600)
T ss_pred             ccccccccccceeeecccHHHHHHHHHhhccccccCc-CCCCCCchhhhcchheeecc
Confidence            0111222344568999999999999988777666553 67899999999999988543

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=95.08  E-value=0.28  Score=44.41  Aligned_cols=165  Identities=16%  Similarity=0.197  Sum_probs=88.6

Q ss_pred             cCCCCCCCcccCccccCCcccCcccccccCCcch-----------HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 023322          105 KPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANY-----------KVFFIFVLYAVVACIYSMVLLVGSLTNDSLEDELQ  173 (284)
Q Consensus       105 kP~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N~-----------~~Fi~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (284)
                      +-.+.+-|++|+.-....-|||.--|.||-..-|           +-.=.|..++......+..+.........    ..
T Consensus       105 ~~~~~~~C~~C~~~KP~RS~HC~~Cn~CV~k~DHHC~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~----~~  180 (309)
T COG5273         105 KFGTENFCSTCNIYKPPRSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIA----GI  180 (309)
T ss_pred             ccccceeccccccccCCCCccchhhcchhhccCccCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH----hh
Confidence            4456778999999999999999999999988755           45557777766666666655554443311    11


Q ss_pred             cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHHhhhhhHHHHHhCC-CcccCCCChhHHHH--HHhhcC
Q 023322          174 TGGSFRTAYVISGLLLVPLSVALSVLLGWHIYLIFHNKTTIEYHEGVRALWLAEKGG-TVYKHPYDLGIFEN--LTSVLG  250 (284)
Q Consensus       174 ~~~~~~~~~~i~~~~~~~~~~~~~~l~~~h~~li~~n~Tt~E~~~~~~~~~~~~~~~-~~~~npyd~G~~~N--~~~vfG  250 (284)
                      .............++..........+......++..+....+...-.+.... .+++ .....++.++.  |  +...+.
T Consensus       181 ~~~~~~~~~~~~~li~~~~~~~~~~f~~~~~~~~~~~~~~~~~~t~~e~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~d  257 (309)
T COG5273         181 FSIRHDTSLAICFLIFGCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQI-SRGGSTLEFFPLCRES--NLPFTNIFD  257 (309)
T ss_pred             ccccCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-ccceecccccchhccC--CcCceeccC
Confidence            1222223333233333222333444555566666666666665544322211 1111 11223444433  3  122222


Q ss_pred             CCceeeeecCCCCCCCCeEEeecccccc
Q 023322          251 PNIFSWVCPSSRHIGSGLNFRTAYHNAV  278 (284)
Q Consensus       251 ~~~~~W~~P~~~~~~dG~~~~~~~~~~~  278 (284)
                      ..+  |.+|...+.++++++.+..+...
T Consensus       258 ~~~--~~~~~~~~~~~~~~~i~~~~~~~  283 (309)
T COG5273         258 SSE--GALPLDLGIGQNLSTIKGSNALY  283 (309)
T ss_pred             CCc--cccccccCccccceeecCCCcee
Confidence            222  66776666677777766554433

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.91  E-value=0.69  Score=37.70  Aligned_cols=51  Identities=18%  Similarity=0.439  Sum_probs=37.2

Q ss_pred             CccccccccCcccCCCCCCCcccCccccCCcccCcccccccCCcchHHHHHHHHHHHHHHHH
Q 023322           93 GDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIY  154 (284)
Q Consensus        93 ~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N~~~Fi~fl~~~~~~~~~  154 (284)
                      ...++|..|+.-...+-|||..-|.||.+.-|.           .+-.|+++.....+..++
T Consensus        60 ~Rs~HC~~C~~CV~~~DHHC~w~~~cIG~~N~~-----------~F~~fl~~~~~~~~~~~~  110 (174)
T PF01529_consen   60 PRSHHCRVCNRCVLRFDHHCPWLGNCIGRRNHR-----------YFLLFLLYLCLYCLYFFI  110 (174)
T ss_pred             CcceeccccccccccccccchhhccccccccHH-----------HHHHHHHHHHHHHHHHHH
Confidence            356889999999999999999999999887663           445676666554444443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=93.67  E-value=0.27  Score=44.11  Aligned_cols=57  Identities=19%  Similarity=0.303  Sum_probs=43.6

Q ss_pred             CCCCCcccCccccCCcccCcccccccCCcc-----------hHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 023322          108 RAHHCRVCKRCVLRMDHHCIWISNCVGHAN-----------YKVFFIFVLYAVVACIYSMVLLVGSLT  164 (284)
Q Consensus       108 Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N-----------~~~Fi~fl~~~~~~~~~~~~~~~~~~~  164 (284)
                      +.|+|..|+..+..+-|||+.=|+||-..-           +|-+-.|+.+++...+..+........
T Consensus       112 ~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~  179 (299)
T KOG1311|consen  112 EWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFY  179 (299)
T ss_pred             ceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            389999999999999999999999999985           578889997766444444444333333

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=92.46  E-value=0.66  Score=41.79  Aligned_cols=49  Identities=31%  Similarity=0.193  Sum_probs=33.2

Q ss_pred             cCCCChhHHHHHHhhcCCCceeeeecCC-CCCCCCeEEeeccccccCCCC
Q 023322          234 KHPYDLGIFENLTSVLGPNIFSWVCPSS-RHIGSGLNFRTAYHNAVGASM  282 (284)
Q Consensus       234 ~npyd~G~~~N~~~vfG~~~~~W~~P~~-~~~~dG~~~~~~~~~~~~~~~  282 (284)
                      ..+|+.+.-.|+...++|....|.-+.. +-.+||.++....+.+..+++
T Consensus       248 ~~n~~~vfg~~~~~wl~P~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (307)
T KOG1315|consen  248 YVNFREVFGSNLLYWLLPIDSSWGDGVSFPLRGDGLDFRTASDSKPDNSS  297 (307)
T ss_pred             eecHHHHhCCCceEEeccccCccccCccccccccCCccccccccCcccCc
Confidence            3467777778888888877666766654 456788877776655555443

>PRK04136 rpl40e 50S ribosomal protein L40e; Provisional

Probab=89.49  E-value=0.25  Score=31.30  Aligned_cols=24  Identities=33%  Similarity=0.819  Sum_probs=21.9

Q ss_pred             ccccccccCcccCCCCCCCcccCc
Q 023322           94 DLRYCQKCSHYKPPRAHHCRVCKR  117 (284)
Q Consensus        94 ~~~~C~~C~~~kP~Rs~HC~~C~~  117 (284)
                      ....|..|...-|+|+..|+.|+.
T Consensus        13 ~k~ICrkC~ARnp~~A~~CRKCg~   36 (48)
T PRK04136         13 NKKICMRCNARNPWRATKCRKCGY   36 (48)
T ss_pred             cccchhcccCCCCccccccccCCC
Confidence            568999999999999999998875

>PF13240 zinc_ribbon_2: zinc-ribbon domain

Probab=89.14  E-value=0.23  Score=26.58  Aligned_cols=21  Identities=29%  Similarity=0.733  Sum_probs=18.5

Q ss_pred             cccccCcccCCCCCCCcccCc
Q 023322           97 YCQKCSHYKPPRAHHCRVCKR  117 (284)
Q Consensus        97 ~C~~C~~~kP~Rs~HC~~C~~  117 (284)
                      +|..|...-++.++.|+.|+.
T Consensus         1 ~Cp~CG~~~~~~~~fC~~CG~   21 (23)
T PF13240_consen    1 YCPNCGAEIEDDAKFCPNCGT   21 (23)
T ss_pred             CCcccCCCCCCcCcchhhhCC
Confidence            689999999999999999875

>PTZ00303 phosphatidylinositol kinase; Provisional

Probab=86.95  E-value=0.47  Score=47.27  Aligned_cols=22  Identities=41%  Similarity=0.848  Sum_probs=18.5

Q ss_pred             ccccccCcccC-------CCCCCCcccCc
Q 023322           96 RYCQKCSHYKP-------PRAHHCRVCKR  117 (284)
Q Consensus        96 ~~C~~C~~~kP-------~Rs~HC~~C~~  117 (284)
                      ..|..|+..-.       -|-|||+.||+
T Consensus       461 dtC~~C~kkFfSlsK~L~~RKHHCRkCGr  489 (1374)
T PTZ00303        461 DSCPSCGRAFISLSRPLGTRAHHCRSCGI  489 (1374)
T ss_pred             CcccCcCCcccccccccccccccccCCcc
Confidence            67999998764       39999999987

>PF13248 zf-ribbon_3: zinc-ribbon domain

Probab=83.38  E-value=0.7  Score=25.40  Aligned_cols=22  Identities=27%  Similarity=0.750  Sum_probs=19.1

Q ss_pred             ccccccCcccCCCCCCCcccCc
Q 023322           96 RYCQKCSHYKPPRAHHCRVCKR  117 (284)
Q Consensus        96 ~~C~~C~~~kP~Rs~HC~~C~~  117 (284)
                      ++|..|...-++.++.|..||.
T Consensus         3 ~~Cp~Cg~~~~~~~~fC~~CG~   24 (26)
T PF13248_consen    3 MFCPNCGAEIDPDAKFCPNCGA   24 (26)
T ss_pred             CCCcccCCcCCcccccChhhCC
Confidence            6899999988899999998875

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=80.20  E-value=0.83  Score=44.41  Aligned_cols=64  Identities=11%  Similarity=-0.054  Sum_probs=52.6

Q ss_pred             ccccccccCcccCCCCCCCcccCccccCCcccCcccccccCCcchHHHHHHHHHHHHHHHHHHHH
Q 023322           94 DLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWISNCVGHANYKVFFIFVLYAVVACIYSMVL  158 (284)
Q Consensus        94 ~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N~~~Fi~fl~~~~~~~~~~~~~  158 (284)
                      ....|.+|....+.+..++..+-.++..+++||+|+. +|+.+|-..+-...+...+..++....
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fw~~~~w~~-~i~~~~~~~~~~~~i~~~l~~~~~f~~  387 (600)
T KOG0509|consen  324 LTCLCATRKIVGFLLRPPLLSGFFLSTLFWFYYFWFS-KITPYTLFDFHYCFIISVLAYFITFGL  387 (600)
T ss_pred             hheeccchhhccccccchhHHHHHHHHHHHHHHhhhe-eccchhhhhhHHHHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999 999999877765555444444444444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	284
3j21_g	51	50S ribosomal protein L40E; archaea, archaeal, KIN	91.21
2ayj_A	56	50S ribosomal protein L40E; Zn-binding, beta-stran	86.04

>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}

Probab=91.21  E-value=0.099  Score=32.97  Aligned_cols=32  Identities=25%  Similarity=0.409  Sum_probs=25.8

Q ss_pred             hhcCCccccccccCcccCCCCCCCcccCcccc
Q 023322           89 KRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVL  120 (284)
Q Consensus        89 ~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~  120 (284)
                      ++.......|..|....|+++..|+.||.--+
T Consensus         8 e~r~~~k~iCpkC~a~~~~gaw~CrKCG~~~l   39 (51)
T 3j21_g            8 EARIFKKYVCLRCGATNPWGAKKCRKCGYKRL   39 (51)
T ss_dssp             HHHSSSEEECTTTCCEECTTCSSCSSSSSCCC
T ss_pred             HHHHhCCccCCCCCCcCCCCceecCCCCCccc
Confidence            33334668999999999999999999987544

>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7

Probab=86.04  E-value=0.32  Score=31.05  Aligned_cols=27  Identities=37%  Similarity=0.783  Sum_probs=23.3

Q ss_pred             ccccccccCcccCCCCCCCcccCcccc
Q 023322           94 DLRYCQKCSHYKPPRAHHCRVCKRCVL  120 (284)
Q Consensus        94 ~~~~C~~C~~~kP~Rs~HC~~C~~CV~  120 (284)
                      +...|..|...-|+|+..|+.|+..-+
T Consensus        18 ~k~ICrkC~ARnp~~A~~CRKCg~~~L   44 (56)
T 2ayj_A           18 LKKVCRKCGALNPIRATKCRRCHSTNL   44 (56)
T ss_dssp             CCEEETTTCCEECTTCSSCTTTCCCCE
T ss_pred             chhhhccccCcCCcccccccCCCCCCC
Confidence            558999999999999999999885433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	284
d2ayja1	56	g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolob	0.002

>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]} Length = 56

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]

 Score = 34.0 bits (78), Expect = 0.002
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 98  CQKCSHYKPPRAHHCRVCKRCVLRM 122
           C+KC    P RA  CR C    LR+
Sbjct: 22  CRKCGALNPIRATKCRRCHSTNLRL 46

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	284
d2ayja1	56	Ribosomal protein L40e {Sulfolobus solfataricus [T	88.61

>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=88.61  E-value=0.1  Score=31.60  Aligned_cols=24  Identities=38%  Similarity=0.862  Sum_probs=21.6

Q ss_pred             ccccccccCcccCCCCCCCcccCc
Q 023322           94 DLRYCQKCSHYKPPRAHHCRVCKR  117 (284)
Q Consensus        94 ~~~~C~~C~~~kP~Rs~HC~~C~~  117 (284)
                      +.+.|.+|...-|+|+..|+.|+.
T Consensus        18 ~k~ICrkC~AR~p~rAt~CRKCg~   41 (56)
T d2ayja1          18 LKKVCRKCGALNPIRATKCRRCHS   41 (56)
T ss_dssp             CCEEETTTCCEECTTCSSCTTTCC
T ss_pred             hhHHHhhccccCCccccccccCCC
Confidence            568999999999999999998864