Citrus Sinensis ID: 023327

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280----
MNGKEILQKMKVKAGFCTSALDTGKGKSKMSKHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKFHR
ccccccccEEEcccccccccccccccccccccccEEEEEEEEcccccccccEEEEEEcccccccEEEEEEEcccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEccEEEEEEcccccEEEEEccEEEEcccccccccHHHHHHHcccEEEEccccccccccHHHHHHHcccccccccccccccEEEEEccccccEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHcccccccEEEEEEccc
ccHHHHHHHcHHHccccccccccccccccccccEEEEEEEcccccccccccEEEEEEEccccccEEEEEEEcccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEcccEEEEEEcccccEEEEEccEEEEccccccccHHHHHHHHcccEEEEccccccccccEHHHHHHHccHHHHHHccccccEEEEEEccccEEEEEEcccHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHccccccEEEEEEEEcc
MNGKEILQKMKVKAGfctsaldtgkgkskmskhithgyhlvkgksnhAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLfdnilkepdfwtdTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGvakqlsvdhepskekrliesrggfvsnipgdvprvdgQLAVARAfgdkslkihlssepdvkvemitDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVsrkskddisCIVVKFHR
MNGKEILQKMKVKAGFCTSALdtgkgkskmsKHITHGyhlvkgksnHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVIskngvakqlsvdhepskekrliesrggfvsnipgdvpRVDGQLAVARAfgdkslkihlssepdvkveMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIehavsrkskddiscivvkfhr
MNGKEILQKMKVKAGFCTSALDTGKGKSKMSKHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKFHR
*************AGFCT**************HITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISK*************************FVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVS****DDISCIVVK***
*********************************ITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAF**GKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKFHR
MNGKEILQKMKVKAGFCTSALD*********KHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQ************LIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKFHR
*********M*VKAGFCTSALD****KSKMSKHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKFHR
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MNGKEILQKMKVKAGFCTSALDTGKGKSKMSKHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKFHR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query284 2.2.26 [Sep-21-2011]
Q93YW5283 Probable protein phosphat yes no 0.996 1.0 0.780 1e-126
Q9LDA7289 Probable protein phosphat no no 0.996 0.979 0.719 1e-117
Q9SIU8290 Probable protein phosphat no no 0.985 0.965 0.732 1e-116
Q0D673290 Probable protein phosphat yes no 0.992 0.972 0.715 1e-114
Q0JAA0321 Probable protein phosphat no no 0.978 0.866 0.608 5e-96
Q9LME4281 Probable protein phosphat no no 0.880 0.889 0.616 6e-88
Q9S9Z7282 Probable protein phosphat no no 0.911 0.918 0.611 5e-86
Q7XQU7284 Probable protein phosphat no no 0.933 0.933 0.590 1e-85
O64583339 Probable protein phosphat no no 0.880 0.737 0.599 5e-83
Q8L7I4283 Probable protein phosphat no no 0.919 0.922 0.592 5e-82
>sp|Q93YW5|P2C58_ARATH Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1 Back     alignment and function desciption
 Score =  451 bits (1159), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 221/283 (78%), Positives = 248/283 (87%)

Query: 1   MNGKEILQKMKVKAGFCTSALDTGKGKSKMSKHITHGYHLVKGKSNHAMEDYLVSEFKQE 60
           M G  IL K+K+KAGFC SA D G+GKSKM K+ITHG+H VKGKS+H MEDY+VSEFK+ 
Sbjct: 1   MAGSNILHKIKLKAGFCGSAPDMGRGKSKMWKNITHGFHCVKGKSSHPMEDYVVSEFKKL 60

Query: 61  KDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQA 120
           + +ELGLFAIFDGHLGHDVA YLQT+LFDNILKE DFWTDTE+AIR AY  TD  IL+Q+
Sbjct: 61  EGHELGLFAIFDGHLGHDVAKYLQTNLFDNILKEKDFWTDTENAIRNAYRSTDAVILQQS 120

Query: 121 FVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGG 180
             LGKGGSTAVT ILI+G+KLVVANVGDSRAV+SKNGVA QLSVDHEPSKEK+ IESRGG
Sbjct: 121 LKLGKGGSTAVTGILIDGKKLVVANVGDSRAVMSKNGVAHQLSVDHEPSKEKKEIESRGG 180

Query: 181 FVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVM 240
           FVSNIPGDVPRVDGQLAVARAFGDKSLK+HLSSEPD+  + I D TEFI+ ASDGIWKV+
Sbjct: 181 FVSNIPGDVPRVDGQLAVARAFGDKSLKLHLSSEPDITHQTIDDHTEFILFASDGIWKVL 240

Query: 241 TNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKFH 283
           +NQEAVD IK +KD  +AAKHLIE A+SRKSKDDISCIVVKFH
Sbjct: 241 SNQEAVDAIKSIKDPHAAAKHLIEEAISRKSKDDISCIVVKFH 283

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9LDA7|P2C39_ARATH Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1 Back     alignment and function description
>sp|Q9SIU8|P2C20_ARATH Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 PE=1 SV=3 Back     alignment and function description
>sp|Q0D673|P2C62_ORYSJ Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1 Back     alignment and function description
>sp|Q0JAA0|P2C44_ORYSJ Probable protein phosphatase 2C 44 OS=Oryza sativa subsp. japonica GN=Os04g0609600 PE=2 SV=1 Back     alignment and function description
>sp|Q9LME4|P2C09_ARATH Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana GN=At1g22280 PE=1 SV=1 Back     alignment and function description
>sp|Q9S9Z7|P2C10_ARATH Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1 Back     alignment and function description
>sp|Q7XQU7|P2C41_ORYSJ Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0452000 PE=2 SV=2 Back     alignment and function description
>sp|O64583|P2C28_ARATH Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=2 Back     alignment and function description
>sp|Q8L7I4|P2C17_ARATH Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query284
255553671283 protein phosphatase 2c, putative [Ricinu 0.996 1.0 0.830 1e-135
224133470286 predicted protein [Populus trichocarpa] 0.985 0.979 0.839 1e-134
225446422283 PREDICTED: probable protein phosphatase 0.996 1.0 0.791 1e-128
147796432283 hypothetical protein VITISV_029655 [Viti 0.996 1.0 0.784 1e-126
225461504283 PREDICTED: probable protein phosphatase 0.996 1.0 0.784 1e-126
18417190283 putative protein phosphatase 2C 58 [Arab 0.996 1.0 0.780 1e-124
356542975281 PREDICTED: probable protein phosphatase 0.989 1.0 0.766 1e-123
312282095282 unnamed protein product [Thellungiella h 0.989 0.996 0.766 1e-122
350536387282 protein phosphatase 2C [Solanum lycopers 0.982 0.989 0.736 1e-121
255584729282 protein phosphatase 2c, putative [Ricinu 0.989 0.996 0.755 1e-120
>gi|255553671|ref|XP_002517876.1| protein phosphatase 2c, putative [Ricinus communis] gi|223542858|gb|EEF44394.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  485 bits (1249), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 235/283 (83%), Positives = 258/283 (91%)

Query: 1   MNGKEILQKMKVKAGFCTSALDTGKGKSKMSKHITHGYHLVKGKSNHAMEDYLVSEFKQE 60
           M G++IL KMKVKAGF +SA +TGKGKSK+ KHITHGYHLVKGKS+H MEDY+VS FKQ 
Sbjct: 1   MTGRDILHKMKVKAGFGSSASETGKGKSKLVKHITHGYHLVKGKSHHDMEDYVVSNFKQV 60

Query: 61  KDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQA 120
            +NELGLFAIFDGHLGHDVA+YLQ HLFDNILKEPDFWTDTESAIRRAYH TD +ILE+A
Sbjct: 61  NNNELGLFAIFDGHLGHDVASYLQNHLFDNILKEPDFWTDTESAIRRAYHTTDDEILEKA 120

Query: 121 FVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGG 180
           FVLGKGGSTAVTAILINGQKLVVANVGDSRAVI KNGVAKQLSVDHEPSKEK +IESRGG
Sbjct: 121 FVLGKGGSTAVTAILINGQKLVVANVGDSRAVICKNGVAKQLSVDHEPSKEKNMIESRGG 180

Query: 181 FVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVM 240
           FVSN+PGDVPRVDGQLAVARAFGDKSLKIHLSSEPD+  E I DD EF+ILASDG+WKVM
Sbjct: 181 FVSNLPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDITEERIGDDAEFVILASDGVWKVM 240

Query: 241 TNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKFH 283
           +NQ+A+D IK +KDA+ AAK +IE AVSRKSKDDISCIVV+F 
Sbjct: 241 SNQDAMDSIKDIKDAQLAAKRVIEEAVSRKSKDDISCIVVRFQ 283

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224133470|ref|XP_002328050.1| predicted protein [Populus trichocarpa] gi|222837459|gb|EEE75838.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225446422|ref|XP_002275890.1| PREDICTED: probable protein phosphatase 2C 58 [Vitis vinifera] gi|147855345|emb|CAN81770.1| hypothetical protein VITISV_012074 [Vitis vinifera] gi|302143321|emb|CBI21882.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147796432|emb|CAN70385.1| hypothetical protein VITISV_029655 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225461504|ref|XP_002285109.1| PREDICTED: probable protein phosphatase 2C 39 [Vitis vinifera] gi|302142975|emb|CBI20270.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|18417190|ref|NP_567808.1| putative protein phosphatase 2C 58 [Arabidopsis thaliana] gi|75163673|sp|Q93YW5.1|P2C58_ARATH RecName: Full=Probable protein phosphatase 2C 58; Short=AtPP2C58 gi|16604585|gb|AAL24149.1| putative protein phosphatase 2C [Arabidopsis thaliana] gi|20258991|gb|AAM14211.1| putative protein phosphatase 2C [Arabidopsis thaliana] gi|332660081|gb|AEE85481.1| putative protein phosphatase 2C 58 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356542975|ref|XP_003539939.1| PREDICTED: probable protein phosphatase 2C 58-like [Glycine max] Back     alignment and taxonomy information
>gi|312282095|dbj|BAJ33913.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|350536387|ref|NP_001234500.1| protein phosphatase 2C [Solanum lycopersicum] gi|46277128|gb|AAS86762.1| protein phosphatase 2C [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|255584729|ref|XP_002533085.1| protein phosphatase 2c, putative [Ricinus communis] gi|223527124|gb|EEF29300.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query284
TAIR|locus:2121373283 AT4G28400 [Arabidopsis thalian 0.996 1.0 0.780 1.2e-115
TAIR|locus:2087095289 AT3G15260 [Arabidopsis thalian 0.992 0.975 0.725 6.5e-106
TAIR|locus:2046046290 PIA1 "PP2C induced by AVRRPM1" 0.985 0.965 0.732 8.3e-106
TAIR|locus:2008341282 AT1G34750 [Arabidopsis thalian 0.922 0.929 0.604 5.4e-79
TAIR|locus:2061579339 AT2G34740 [Arabidopsis thalian 0.876 0.734 0.596 1.6e-77
TAIR|locus:2194734283 AT1G78200 [Arabidopsis thalian 0.915 0.918 0.594 3.1e-76
TAIR|locus:2183695354 AT5G10740 [Arabidopsis thalian 0.897 0.720 0.452 1.9e-51
TAIR|locus:2149363 447 AT5G24940 [Arabidopsis thalian 0.897 0.570 0.444 2.8e-50
TAIR|locus:2029172371 AT1G43900 [Arabidopsis thalian 0.855 0.654 0.446 3.2e-49
TAIR|locus:2124784311 WIN2 "HOPW1-1-interacting 2" [ 0.897 0.819 0.433 4.1e-49
TAIR|locus:2121373 AT4G28400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1140 (406.4 bits), Expect = 1.2e-115, P = 1.2e-115
 Identities = 221/283 (78%), Positives = 248/283 (87%)

Query:     1 MNGKEILQKMKVKAGFCTSALDTGKGKSKMSKHITHGYHLVKGKSNHAMEDYLVSEFKQE 60
             M G  IL K+K+KAGFC SA D G+GKSKM K+ITHG+H VKGKS+H MEDY+VSEFK+ 
Sbjct:     1 MAGSNILHKIKLKAGFCGSAPDMGRGKSKMWKNITHGFHCVKGKSSHPMEDYVVSEFKKL 60

Query:    61 KDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQA 120
             + +ELGLFAIFDGHLGHDVA YLQT+LFDNILKE DFWTDTE+AIR AY  TD  IL+Q+
Sbjct:    61 EGHELGLFAIFDGHLGHDVAKYLQTNLFDNILKEKDFWTDTENAIRNAYRSTDAVILQQS 120

Query:   121 FVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGG 180
               LGKGGSTAVT ILI+G+KLVVANVGDSRAV+SKNGVA QLSVDHEPSKEK+ IESRGG
Sbjct:   121 LKLGKGGSTAVTGILIDGKKLVVANVGDSRAVMSKNGVAHQLSVDHEPSKEKKEIESRGG 180

Query:   181 FVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVM 240
             FVSNIPGDVPRVDGQLAVARAFGDKSLK+HLSSEPD+  + I D TEFI+ ASDGIWKV+
Sbjct:   181 FVSNIPGDVPRVDGQLAVARAFGDKSLKLHLSSEPDITHQTIDDHTEFILFASDGIWKVL 240

Query:   241 TNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKFH 283
             +NQEAVD IK +KD  +AAKHLIE A+SRKSKDDISCIVVKFH
Sbjct:   241 SNQEAVDAIKSIKDPHAAAKHLIEEAISRKSKDDISCIVVKFH 283
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005575 "cellular_component" evidence=ND
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0031347 "regulation of defense response" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
TAIR|locus:2087095 AT3G15260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046046 PIA1 "PP2C induced by AVRRPM1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008341 AT1G34750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061579 AT2G34740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194734 AT1G78200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183695 AT5G10740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149363 AT5G24940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029172 AT1G43900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124784 WIN2 "HOPW1-1-interacting 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SIU8P2C20_ARATH3, ., 1, ., 3, ., 1, 60.73230.98590.9655nono
Q0D673P2C62_ORYSJ3, ., 1, ., 3, ., 1, 60.71520.99290.9724yesno
Q93YW5P2C58_ARATH3, ., 1, ., 3, ., 1, 60.78090.99641.0yesno
Q9LDA7P2C39_ARATH3, ., 1, ., 3, ., 1, 60.71970.99640.9792nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00640240
hypothetical protein (286 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query284
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 3e-82
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 8e-77
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 9e-60
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 8e-46
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 5e-43
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 4e-32
PRK14559645 PRK14559, PRK14559, putative protein serine/threon 9e-10
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  247 bits (633), Expect = 3e-82
 Identities = 108/260 (41%), Positives = 151/260 (58%), Gaps = 21/260 (8%)

Query: 36  HGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEP 95
            G     G      ED +V +     ++  GLF +FDGH GH    +    L + +L+E 
Sbjct: 3   AGVSDKGGD-RKTNEDAVVIKPNLNNEDG-GLFGVFDGHGGHAAGEFASKLLVEELLEEL 60

Query: 96  DFWTDT-----ESAIRRAYHMTDTKILEQA---FVLGKGGSTAVTAILINGQKLVVANVG 147
           +          E A+R+A+   D +ILE+A       + G+TAV A LI G KL VANVG
Sbjct: 61  EETLTLSEEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVA-LIRGNKLYVANVG 119

Query: 148 DSRAVISKNGVAKQLSVDHEPS--KEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDK 205
           DSRAV+ +NG A QL+ DH+P   +E+  IE  GG VSN      RV G LAV RA GD 
Sbjct: 120 DSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVSN-----GRVPGVLAVTRALGDF 174

Query: 206 SLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVK---DAKSAAKHL 262
            LK  +S+EPDV V  +T+D +F+ILASDG+W V++NQEAVD ++      D + AA+ L
Sbjct: 175 DLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQEL 234

Query: 263 IEHAVSRKSKDDISCIVVKF 282
           ++ A+ R S D+I+ +VV+ 
Sbjct: 235 VDLALRRGSHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|237756 PRK14559, PRK14559, putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 284
PLN03145365 Protein phosphatase 2c; Provisional 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 99.97
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.94
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.93
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.88
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.86
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.82
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.75
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.6
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.72
PRK10693303 response regulator of RpoS; Provisional 82.72
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.1e-48  Score=342.64  Aligned_cols=246  Identities=35%  Similarity=0.565  Sum_probs=207.6

Q ss_pred             CceeeeEEeecCCCCCCCCceEEeecccC--------CCCceEEEEEEcCCCchHHHHHHHHHHHHHHHcCCCCcccHHH
Q 023327           32 KHITHGYHLVKGKSNHAMEDYLVSEFKQE--------KDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTES  103 (284)
Q Consensus        32 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~--------~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~~~~~~  103 (284)
                      +.++++.+|++|.|+ .|||++++.....        ...+..+|+|||||||+.+++++++.+.+.+.+.......+.+
T Consensus        63 ~~~~~~~~s~~G~R~-~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~  141 (365)
T PLN03145         63 PVVRSGAWADIGSRS-SMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEK  141 (365)
T ss_pred             CceEEEEEccccCCC-CCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHH
Confidence            447899999999866 9999987643211        1234689999999999999999999999988876555556788


Q ss_pred             HHHHHHHHHHHHHHHHhcc-cCCCCcceEEEEEEeCcEEEEEEeCCceEEEEeCCeeeeCCCCCCCch--HHHHHHHcCC
Q 023327          104 AIRRAYHMTDTKILEQAFV-LGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSK--EKRLIESRGG  180 (284)
Q Consensus       104 ~l~~~~~~~~~~l~~~~~~-~~~~~~tt~~~~~~~~~~l~~~~vGDsr~~l~~~~~~~~lt~dh~~~~--e~~ri~~~gg  180 (284)
                      +|.++|.+++..+.+.... ....+|||++++++.++++|++|+||||+|+++++++++||.||++.+  |+.|+.+.||
T Consensus       142 al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg  221 (365)
T PLN03145        142 VVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGG  221 (365)
T ss_pred             HHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCC
Confidence            8999999999998764322 224589999999999999999999999999999999999999999987  7889999999


Q ss_pred             eeecCCCCCCccCCcchhccccCCcCCCC-------CccCCCceEEEEeCCCCeEEEEEcCCCcCCCCHHHHHHHHH---
Q 023327          181 FVSNIPGDVPRVDGQLAVARAFGDKSLKI-------HLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIK---  250 (284)
Q Consensus       181 ~~~~~~~~~~~~~~~~~ltr~lG~~~~~~-------~v~~~p~~~~~~l~~~~d~llL~SDGl~d~l~~~~i~~~~~---  250 (284)
                      .+..     .+.++.+.+||+||+..+|.       .+.++|++..+.+.++++|||||||||||+++++++.++++   
T Consensus       222 ~v~~-----g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l  296 (365)
T PLN03145        222 YVYD-----GYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRL  296 (365)
T ss_pred             ceec-----ceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHH
Confidence            8763     25567778999999977652       36789999999999877788999999999999999866553   


Q ss_pred             -ccCCHHHHHHHHHHHHHhcCCCCCceEEEEEec
Q 023327          251 -HVKDAKSAAKHLIEHAVSRKSKDDISCIVVKFH  283 (284)
Q Consensus       251 -~~~~~~~~a~~L~~~a~~~~~~DNiTvivv~i~  283 (284)
                       +..+|+++|+.|+++|+++++.||+|||||+|.
T Consensus       297 ~~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~  330 (365)
T PLN03145        297 QEHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQ  330 (365)
T ss_pred             hcCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEee
Confidence             346899999999999999999999999999986

>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information
>PRK10693 response regulator of RpoS; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query284
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 4e-27
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 4e-27
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 6e-27
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 3e-26
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 3e-26
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-25
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 5e-25
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 6e-25
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 9e-25
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 1e-24
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 3e-24
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 3e-24
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 4e-24
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 4e-24
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 4e-24
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 4e-24
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 5e-15
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 5e-12
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 3e-09
2pom_A372 Tab1 With Manganese Ion Length = 372 1e-07
2j4o_A401 Structure Of Tab1 Length = 401 2e-07
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 7e-07
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 2e-06
2pk0_A250 Structure Of The S. Agalactiae Serine/threonine Pho 1e-04
3rnr_A211 Crystal Structure Of Stage Ii Sporulation E Family 3e-04
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure 
Iteration: 1

 Score =  118 bits (295), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 128/249 (51%), Gaps = 41/249 (16%)
Query: 67  LFAIFDGHLGHDVANYLQTHLFDNILKEPDFWT-------------DTESAIRRAY---- 109
            FA++DGH G  VANY  THL ++I    DF               + ++ IR  +    
Sbjct: 57  FFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKID 116
Query: 110 -HMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEP 168
            +M +   L     + + GSTAV  ++I+ + +   N GDSRAV+ +NG     + DH+P
Sbjct: 117 EYMRNFSDLRNG--MDRSGSTAV-GVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKP 173
Query: 169 S--KEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKI---------HLSSEPDV 217
              +EK  I++ GG V      + RV+G LAV+RA GD   K           +S EP+V
Sbjct: 174 CNPREKERIQNAGGSVM-----IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEV 228
Query: 218 KVEMITDDTEFIILASDGIWKVMTNQEAVDCIKH----VKDAKSAAKHLIEHAVSRKSKD 273
              +  ++ EFIILA DGIW VM+N+E  + +K       D ++    +++  + + S+D
Sbjct: 229 YEILRAEEDEFIILAXDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRD 288
Query: 274 DISCIVVKF 282
           ++S ++V F
Sbjct: 289 NMSIVLVCF 297
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PK0|A Chain A, Structure Of The S. Agalactiae Serine/threonine Phosphatase At 2.65 Resolution Length = 250 Back     alignment and structure
>pdb|3RNR|A Chain A, Crystal Structure Of Stage Ii Sporulation E Family Protein From Thermanaerovibrio Acidaminovorans Length = 211 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query284
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-110
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-107
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 7e-98
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 4e-96
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 2e-95
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 3e-92
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 3e-89
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 2e-88
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 5e-73
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 2e-67
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 5e-67
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 2e-57
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 2e-37
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 3e-05
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 4e-23
1txo_A237 Putative bacterial enzyme; serine/threonine protei 1e-19
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 2e-18
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 1e-17
3rnr_A211 Stage II sporulation E family protein; structural 2e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
 Score =  324 bits (831), Expect = e-110
 Identities = 87/292 (29%), Positives = 141/292 (48%), Gaps = 14/292 (4%)

Query: 1   MNGKEILQKMKVKAGFCTSALDTGKGKSKMSKHITHGYHLVKGKSNHAMEDYLVSEFKQE 60
           M   +I++  + + G        GK   K+S     G     GK     ED        +
Sbjct: 90  MEDNDIIEAHREQIGGENLYFQAGKPIPKIS-LENVGCASQIGKRKE-NEDRFDFA---Q 144

Query: 61  KDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQA 120
             +E+  FA++DGH G   A++  TH+   I+       + E+ +  A+   D      A
Sbjct: 145 LTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHA 204

Query: 121 -----FVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPS--KEKR 173
                  L   G+TA  A+L +G +LVVA+VGDSRA++ + G   +L++DH P    EK 
Sbjct: 205 RLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKE 264

Query: 174 LIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIH-LSSEPDVKVEMITD-DTEFIIL 231
            I+  GGFV+      P V+G+LA+ R+ GD  LK   + +EP+ K   +   D  F++L
Sbjct: 265 RIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVL 324

Query: 232 ASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKFH 283
            +DGI  ++ +QE  D +    D   AA  + E A+   ++D+ + +VV F 
Sbjct: 325 TTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFG 376
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query284
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.9
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.9
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.83
3f79_A255 Probable two-component response regulator; adaptor 99.79
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.41
3eq2_A394 Probable two-component response regulator; adaptor 98.89
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=8.3e-49  Score=342.37  Aligned_cols=247  Identities=32%  Similarity=0.527  Sum_probs=210.6

Q ss_pred             CCceeeeEEeecCCCCCCCCceEEeecccCC-CCceEEEEEEcCCCchHHHHHHHHHHHHHHHcCCCC------------
Q 023327           31 SKHITHGYHLVKGKSNHAMEDYLVSEFKQEK-DNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDF------------   97 (284)
Q Consensus        31 ~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~-~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~------------   97 (284)
                      ...|+||++|++|+|. .|||++++...... .++..+|+|||||||+.+|+++++.+++.+.+...+            
T Consensus        21 ~~~~~~~~~s~~G~R~-~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~~~   99 (307)
T 2p8e_A           21 GNGLRYGLSSMQGWRV-EMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALEL   99 (307)
T ss_dssp             ETTEEEEEEEEEETSS-SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-----------
T ss_pred             CCCeeEEEEecCCCCC-cccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccccccc
Confidence            4789999999999976 99999986543211 245789999999999999999999999998763322            


Q ss_pred             -cccHHHHHHHHHHHHHHHHHHHhcc--cCCCCcceEEEEEEeCcEEEEEEeCCceEEEEeCCeeeeCCCCCCCch--HH
Q 023327           98 -WTDTESAIRRAYHMTDTKILEQAFV--LGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSK--EK  172 (284)
Q Consensus        98 -~~~~~~~l~~~~~~~~~~l~~~~~~--~~~~~~tt~~~~~~~~~~l~~~~vGDsr~~l~~~~~~~~lt~dh~~~~--e~  172 (284)
                       .+.+..+|+++|..+++.+.+....  ....+|||++++++.+++++++|+||||+|++|+|++.+||.||++.+  |+
T Consensus       100 ~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~~~E~  179 (307)
T 2p8e_A          100 SVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREK  179 (307)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCCHHHH
Confidence             2345788999999999999875432  135689999999999999999999999999999999999999999987  88


Q ss_pred             HHHHHcCCeeecCCCCCCccCCcchhccccCCcCCCC---------CccCCCceEEEEeCCCCeEEEEEcCCCcCCCCHH
Q 023327          173 RLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKI---------HLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQ  243 (284)
Q Consensus       173 ~ri~~~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~~~---------~v~~~p~~~~~~l~~~~d~llL~SDGl~d~l~~~  243 (284)
                      .|+...||.+..     .+.++.+.+||+||+..+|.         .+.++|++..+.+.++++|||||||||||+++++
T Consensus       180 ~rI~~~gg~v~~-----~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~  254 (307)
T 2p8e_A          180 ERIQNAGGSVMI-----QRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNE  254 (307)
T ss_dssp             HHHHHTTCCEET-----TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHH
T ss_pred             HHHHHcCCEEEe-----CcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHH
Confidence            899999998763     36677789999999988763         4688999999999985458999999999999999


Q ss_pred             HHHHHHHc----cCCHHHHHHHHHHHHHhcCCCCCceEEEEEec
Q 023327          244 EAVDCIKH----VKDAKSAAKHLIEHAVSRKSKDDISCIVVKFH  283 (284)
Q Consensus       244 ~i~~~~~~----~~~~~~~a~~L~~~a~~~~~~DNiTvivv~i~  283 (284)
                      ++.+++++    ..+++++|+.|++.|+.+|+.||+||||+++.
T Consensus       255 ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~  298 (307)
T 2p8e_A          255 ELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFS  298 (307)
T ss_dssp             HHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC-
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECC
Confidence            99999986    46899999999999999999999999999985
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 284
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 1e-43
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 6e-28
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  148 bits (374), Expect = 1e-43
 Identities = 88/294 (29%), Positives = 129/294 (43%), Gaps = 43/294 (14%)

Query: 27  KSKMSKHITH--------GYHLVKGKSNHAMEDYLVSEFKQEKDNE-LGLFAIFDGHLGH 77
           K KM KH           G   ++G     MED   +        E    FA++DGH G 
Sbjct: 6   KPKMEKHNAQGQGNGLRYGLSSMQGWRVE-MEDAHTAVIGLPSGLESWSFFAVYDGHAGS 64

Query: 78  DVANYLQTHLFDNILKEPDFWTDT--------ESAIRRAYHMTD---TKILEQAFVLGKG 126
            VA Y   HL D+I    DF            ++ IR  +   D     + E+     + 
Sbjct: 65  QVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRS 124

Query: 127 GSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPS--KEKRLIESRGGFVSN 184
           GSTAV  +LI+ Q     N GDSR ++ +N      + DH+PS   EK  I++ GG V  
Sbjct: 125 GSTAV-GVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI 183

Query: 185 IPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVK----------VEMITDDTEFIILASD 234
                 RV+G LAV+RA GD   K      P  +          +E   +D +FIILA D
Sbjct: 184 -----QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACD 238

Query: 235 GIWKVMTNQEAVDCIKHV----KDAKSAAKHLIEHAVSRKSKDDISCIVVKFHR 284
           GIW VM N+E  D ++       D +     +++  + + S+D++S I++ F  
Sbjct: 239 GIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPN 292
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query284
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-51  Score=350.85  Aligned_cols=248  Identities=31%  Similarity=0.487  Sum_probs=214.5

Q ss_pred             CCCceeeeEEeecCCCCCCCCceEEeecccCC-CCceEEEEEEcCCCchHHHHHHHHHHHHHHHcCC--------CCccc
Q 023327           30 MSKHITHGYHLVKGKSNHAMEDYLVSEFKQEK-DNELGLFAIFDGHLGHDVANYLQTHLFDNILKEP--------DFWTD  100 (284)
Q Consensus        30 ~~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~-~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~--------~~~~~  100 (284)
                      ....++||++|++|+|+ .|||++.+...... .+++.||||||||||+.+|+++++.+.+.+.+..        ...++
T Consensus        17 ~~~~~~~g~~s~~G~R~-~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~   95 (295)
T d1a6qa2          17 QGNGLRYGLSSMQGWRV-EMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVEN   95 (295)
T ss_dssp             EETTEEEEEEEEEETSS-SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHH
T ss_pred             cCCceEEEEEeCccCCC-cccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccccchHHH
Confidence            44789999999999988 89999987655433 3567899999999999999999999999886532        22345


Q ss_pred             HHHHHHHHHHHHHHHHHHHhc--ccCCCCcceEEEEEEeCcEEEEEEeCCceEEEEeCCeeeeCCCCCCCch--HHHHHH
Q 023327          101 TESAIRRAYHMTDTKILEQAF--VLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSK--EKRLIE  176 (284)
Q Consensus       101 ~~~~l~~~~~~~~~~l~~~~~--~~~~~~~tt~~~~~~~~~~l~~~~vGDsr~~l~~~~~~~~lt~dh~~~~--e~~ri~  176 (284)
                      +.++|+++|.++++.+.....  .....+|||++++++.++++|++|+||||+|+++++++.+||.||++.+  |+.|+.
T Consensus        96 ~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~~~E~~Ri~  175 (295)
T d1a6qa2          96 VKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQ  175 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCcccHHHHhhHh
Confidence            778899999999988865432  2245689999999999999999999999999999999999999999987  899999


Q ss_pred             HcCCeeecCCCCCCccCCcchhccccCCcCCCC---------CccCCCceEEEEeCC-CCeEEEEEcCCCcCCCCHHHHH
Q 023327          177 SRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKI---------HLSSEPDVKVEMITD-DTEFIILASDGIWKVMTNQEAV  246 (284)
Q Consensus       177 ~~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~~~---------~v~~~p~~~~~~l~~-~~d~llL~SDGl~d~l~~~~i~  246 (284)
                      ..||.+..     ++.++.+.+||++|+..+|.         .+.+.|++..+.+.. +++|||||||||||.++++|+.
T Consensus       176 ~~gg~v~~-----~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~  250 (295)
T d1a6qa2         176 NAGGSVMI-----QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELC  250 (295)
T ss_dssp             HTTCCEET-----TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHH
T ss_pred             hcCCcccc-----cccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeEeeecCcccccCCHHHHH
Confidence            99998874     47888899999999988773         488999999999864 3669999999999999999999


Q ss_pred             HHHHcc----CCHHHHHHHHHHHHHhcCCCCCceEEEEEec
Q 023327          247 DCIKHV----KDAKSAAKHLIEHAVSRKSKDDISCIVVKFH  283 (284)
Q Consensus       247 ~~~~~~----~~~~~~a~~L~~~a~~~~~~DNiTvivv~i~  283 (284)
                      +++++.    .+|+.+|+.|++.|+++++.||+|||||+|+
T Consensus       251 ~~v~~~~~~~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~  291 (295)
T d1a6qa2         251 DFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFP  291 (295)
T ss_dssp             HHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECT
T ss_pred             HHHHHHhhcCCCHHHHHHHHHHHHHhcCCCCCeEEEEEecc
Confidence            998653    6899999999999999999999999999986
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure