Citrus Sinensis ID: 023421

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
Protein Sequence
MQAQLLVGPITPTTGSDAFSSIIKNSFLISSPRRSTTGSNRHRRTRHRLVVASSSWSSSAAAAAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRGNRRYSSEFEDGVRISTWAELRRKLQYERHWKNYNSKEEYSSFYRKAPVREVQEENPDGGYKIGYLIAWILGGRGGILLTLCLSFASWVCGKTSSGVVVLVVVAVWIGSNLARCAPLPQGALIALLYMSLKLQTDSS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHccccccccccccccccHHHHHcccccccccccccccccEEEEEEEcccccccEEEHHHHHHHHHHHcccccccEEEEEEEEEEccccccccccccHHHHHHHHHHHEEccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccHHHEEcccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccccccccccccccccEcccccccccccccccccccccccHHHHHHccccHHHcccccccccEEEEEEcccccccccEEccccccccccccccccccEEEEEEEEEEHHHHHHHHccccHHHHHHHHHHHHEEEcccc
Coil and Loop (DISEMBL)
mqaqllvgpitpttgsdafSSIIKNSflissprrsttgsnrhrrtRHRLVVASSSWSSSAAAAAIngepdhykVLGVAQSATLADIKRAYRLLARkyhpdvskdsrAVEVFKTIRCAYEVLSNEVTRIKYDralkfrtdsdrsrrgnrryssefedgvRISTWAELRRKLQYERHwknynskeeyssfyrkapvrevqeenpdggykIGYLIAWILGGRGGILLTLCLSFASwvcgktssGVVVLVVVAVWIGsnlarcaplpQGALIALLYMSLKLQTDSS
Flexible Loop (DISEMBL)
mqaqllvgpitpttgsdaFSSIIKnsflissprrsttgsnrhrrtrhrlvvassswssSAAAAAINGEPDHYKVLGVAQSATLADIKRAYRLLArkyhpdvskdsraveVFKTIRCAYevlsnevtrikydralkfrtdsdrsrrgnrryssefedgvristWAELRRKLQYerhwknynskeeyssfyrkapvrevqeenpdggYKIGYLIAWILGGRGGILLTLCLSFASWVCGKTSSGVVVLVVVAVWIGSNLARCAPLPQGALIALLYMSLKLQTDSS
Low Complexity Region (SEG)
MQAQLLVGPITPTTGSDAFSSIIKNSFLISSPRRSTTGSNRHRRTRHRLVVassswsssaaaaaINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRGNRRYSSEFEDGVRISTWAELRRKLQYERHWKNYNSKEEYSSFYRKAPVREVQEENPDGGYKIGYliawilggrggilltlclSFASWVCGKTSSGvvvlvvvavWIGSNLARCAPLPQGALIALLYMSLKLQTDSS
Disordered region (IsUnstruct)
*********************II****************************************AINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF*******************DGVRISTWAELRRKLQYERHWKNYNSKEEYSSFYRK***********DGGYKIGYLIAWILGGRGGILLTLCLSFASWVCGKTSSGVVVLVVVAVWIGSNLARCAPLPQGALIALLYMSLK******
Disordered Region (DISOPRED)
*******************************************************************EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRA********************FEDGVRISTW*********************************************GYLIAWILGGRGGILLTLCLSFASWVCGKTSSGVVVLVVVAVWIGSNLARCAPLPQGALIALLYMSLKLQT***
Disordered Region (DISEMBL)
MQAQLLVGPITPTTGSDAFSSIIKNSFLISS**************RHRL************AAAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRT***************FEDGVRISTWAELRRKLQYERHWKNYNSKEEYSSFYRKAPVREVQEENPDGGYKIGYLIAWILGGRGGILLTLCLSFASWVCGKTSSGVVVLVVVAVWIGSNLARCAPLPQGALIALLYMSLKLQTDSS
Disordered Region (DISPRO)
*QAQLLVGPITPTTG**********************************************AA*INGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSD***RGNRRYSSEFEDGVRISTWAELRRKLQYERHWKNYNSKEEYSSFYRKAPVREVQEENPDGGYKIGYLIAWILGGRGGILLTLCLSFASWVCGKTSSGVVVLVVVAVWIGSNLARCAPLPQGALIALLYMSLKLQT***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQAQLLVGPITPTTGSDAFSSIIKNSFLISSPRRSTTGSNRHRRTRHRLVVASSSWSSSAAAAAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRGNRRYSSEFEDGVRISTWAELRRKLQYERHWKNYNSKEEYSSFYRKAPVREVQEENPDGGYKIGYLIAWILGGRGGILLTLCLSFASWVCGKTSSGVVVLVVVAVWIGSNLARCAPLPQGALIALLYMSLKLQTDSS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	282	2.2.26 [Sep-21-2011]
A7GT07	366	Chaperone protein DnaJ OS	yes	no	0.223	0.172	0.603	2e-15
Q75VW3	356	Chaperone protein DnaJ OS	yes	no	0.329	0.261	0.444	2e-15
A9VHU0	368	Chaperone protein DnaJ OS	yes	no	0.223	0.171	0.555	1e-14
C4L424	368	Chaperone protein DnaJ OS	yes	no	0.223	0.171	0.571	2e-14
B0JW23	374	Chaperone protein DnaJ OS	yes	no	0.223	0.168	0.603	3e-14
B7HCT9	371	Chaperone protein DnaJ OS	yes	no	0.223	0.169	0.539	3e-14
B7IYG6	371	Chaperone protein DnaJ OS	yes	no	0.223	0.169	0.539	3e-14
Q818F0	371	Chaperone protein DnaJ OS	yes	no	0.223	0.169	0.539	3e-14
Q6HDK8	371	Chaperone protein DnaJ OS	yes	no	0.223	0.169	0.539	3e-14
Q81LS3	371	Chaperone protein DnaJ OS	yes	no	0.223	0.169	0.539	3e-14

>sp|A7GT07|DNAJ_BACCN Chaperone protein DnaJ OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dnaJ PE=3 SV=1

 Score = 83.6 bits (205), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 52/63 (82%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y+VLGV++SA+  +IK+AYR LA+KYHPDVSK+  AVE FK ++ AYEVLS+E  R +
Sbjct: 5   DYYEVLGVSKSASKDEIKKAYRRLAKKYHPDVSKEENAVEKFKEVQEAYEVLSDEQKRAQ 64

Query: 130 YDR 132
           YD+
Sbjct: 65  YDQ 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.
Bacillus cereus subsp. cytotoxis (strain NVH 391-98) (taxid: 315749)

>sp|Q75VW3|DNAJ_HYDTT Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) GN=dnaJ PE=3 SV=1

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 6/99 (6%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y++LGV++ AT  +IK+AYR LA++YHPD+S D  A E FK I  AY +LS+E  R +
Sbjct: 5   DYYQILGVSKDATAEEIKKAYRRLAKEYHPDISADENASEKFKEINEAYHILSDEERRKE 64

Query: 130 YDRALKFRTDSDRSRRGNRRYSSEFEDGVRISTWAELRR 168
           YDR LK  +  ++S R    Y  +F +    S W  +RR
Sbjct: 65  YDRILK--SGDEKSYRDFMEYIQDFLE----SIWQGMRR 97

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) (taxid: 608538)

>sp|A9VHU0|DNAJ_BACWK Chaperone protein DnaJ OS=Bacillus weihenstephanensis (strain KBAB4) GN=dnaJ PE=3 SV=1

 Score = 80.9 bits (198), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 51/63 (80%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y+VLG++Q A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +
Sbjct: 5   DYYEVLGLSQGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQ 64

Query: 130 YDR 132
           YD+
Sbjct: 65  YDQ 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Bacillus weihenstephanensis (strain KBAB4) (taxid: 315730)

>sp|C4L424|DNAJ_EXISA Chaperone protein DnaJ OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=dnaJ PE=3 SV=1

 Score = 79.7 bits (195), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 50/63 (79%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y+VLG+ +SA+  DIKRAYR LAR+YHPD+++++ A + FK I  AYEVLS+E  R +
Sbjct: 5   DYYEVLGLDKSASAQDIKRAYRKLARQYHPDINQEADAADKFKEIGEAYEVLSDEQKRAQ 64

Query: 130 YDR 132
           YDR
Sbjct: 65  YDR 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) (taxid: 360911)

>sp|B0JW23|DNAJ_MICAN Chaperone protein DnaJ OS=Microcystis aeruginosa (strain NIES-843) GN=dnaJ PE=3 SV=1

 Score = 79.3 bits (194), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 47/63 (74%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y++LGV++ A   DIKRAYR LARKYHPDV+K+  A E FK I  AYE+LS   TR +
Sbjct: 4   DYYEILGVSRDAGKEDIKRAYRRLARKYHPDVNKEPGAEEHFKEINRAYEILSEPETRNR 63

Query: 130 YDR 132
           YDR
Sbjct: 64  YDR 66

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Microcystis aeruginosa (strain NIES-843) (taxid: 449447)

>sp|B7HCT9|DNAJ_BACC4 Chaperone protein DnaJ OS=Bacillus cereus (strain B4264) GN=dnaJ PE=3 SV=1

 Score = 79.3 bits (194), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 51/63 (80%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +
Sbjct: 5   DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQ 64

Query: 130 YDR 132
           YD+
Sbjct: 65  YDQ 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Bacillus cereus (strain B4264) (taxid: 405532)

>sp|B7IYG6|DNAJ_BACC2 Chaperone protein DnaJ OS=Bacillus cereus (strain G9842) GN=dnaJ PE=3 SV=1

 Score = 79.3 bits (194), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 51/63 (80%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +
Sbjct: 5   DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQ 64

Query: 130 YDR 132
           YD+
Sbjct: 65  YDQ 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Bacillus cereus (strain G9842) (taxid: 405531)

>sp|Q818F0|DNAJ_BACCR Chaperone protein DnaJ OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dnaJ PE=3 SV=1

 Score = 79.3 bits (194), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 51/63 (80%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +
Sbjct: 5   DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQ 64

Query: 130 YDR 132
           YD+
Sbjct: 65  YDQ 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Bacillus cereus (strain ATCC 14579 / DSM 31) (taxid: 226900)

>sp|Q6HDK8|DNAJ_BACHK Chaperone protein DnaJ OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=dnaJ PE=3 SV=1

 Score = 79.0 bits (193), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 51/63 (80%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +
Sbjct: 5   DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQ 64

Query: 130 YDR 132
           YD+
Sbjct: 65  YDQ 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Bacillus thuringiensis subsp. konkukian (strain 97-27) (taxid: 281309)

>sp|Q81LS3|DNAJ_BACAN Chaperone protein DnaJ OS=Bacillus anthracis GN=dnaJ PE=3 SV=1

 Score = 79.0 bits (193), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 51/63 (80%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +
Sbjct: 5   DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQ 64

Query: 130 YDR 132
           YD+
Sbjct: 65  YDQ 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Bacillus anthracis (taxid: 1392)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
255568910	292	chaperone protein DNAj, putative [Ricinu	0.985	0.952	0.554	4e-76
359482129	309	PREDICTED: uncharacterized protein LOC10	0.939	0.857	0.509	9e-74
224123776	332	predicted protein [Populus trichocarpa]	0.971	0.825	0.497	9e-70
297739762	285	unnamed protein product [Vitis vinifera]	0.847	0.838	0.522	3e-69
449446758	316	PREDICTED: uncharacterized protein LOC10	0.971	0.867	0.484	9e-66
356571705	307	PREDICTED: chaperone protein DnaJ-like [	0.936	0.859	0.495	4e-64
15238746	333	chaperone DnaJ-domain containing protein	0.978	0.828	0.457	8e-63
224145988	334	predicted protein [Populus trichocarpa]	0.989	0.835	0.486	5e-61
297807841	331	DNAJ heat shock N-terminal domain-contai	0.996	0.848	0.463	9e-60
383145888	80	Pinus taeda anonymous locus UMN_777_01 g	0.276	0.975	0.512	2e-17

>gi|255568910|ref|XP_002525425.1| chaperone protein DNAj, putative [Ricinus communis] gi|223535238|gb|EEF36915.1| chaperone protein DNAj, putative [Ricinus communis]

 Score =  290 bits (743), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 162/292 (55%), Positives = 199/292 (68%), Gaps = 14/292 (4%)

Query: 1   MQAQLLVGPITPTTGSDAFSSIIKNSFLISSPRRSTTGSNRHRRTRHRLVVASSSWSSSA 60
           MQA LLVGPI          S   +SF+      +   ++   R  H L   SS  ++S+
Sbjct: 1   MQALLLVGPIPTALEGSGAISSSSSSFIAGVVGPAWCWAHHRNRLSHHLRKWSSVAAASS 60

Query: 61  AAAAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEV 120
           + AA N E DHY VLG+ ++AT ADIK+AYRLLARKYHPDVSK S+A ++F ++R AYE+
Sbjct: 61  SRAAANDEQDHYAVLGLTRNATSADIKQAYRLLARKYHPDVSKHSQAGQLFMSVRNAYEI 120

Query: 121 LSNEVTRIKYDRALKFRTDSDRSRRGNRRYSSEFEDGVRISTWAELRRKLQYERHWKNYN 180
           LSNEVTR +YDR L+F+ D+ RS RG   YS EFEDG+RI  WAELRRK+Q ER W+ Y+
Sbjct: 121 LSNEVTRTQYDRVLRFQEDNGRSYRGESYYSPEFEDGLRIYKWAELRRKMQRERRWERYD 180

Query: 181 SKEEYSSFYRKAPVREV-------QEENP-----DGGYKIGYLIAWILGGRGGILLTLCL 228
             +E S    ++ + EV       QE  P     D GYKIGY IAW+LGGRGGILL LCL
Sbjct: 181 VNDENSD--SESDMEEVAEEGIMDQERGPFSEKLDAGYKIGYFIAWVLGGRGGILLMLCL 238

Query: 229 SFASWVCGKTSSGVVVLVVVAVWIGSNLARCAPLPQGALIALLYMSLKLQTD 280
            FASW CGKTSS +V L VVA+W+GSNLAR APLPQGAL+ LLYMS+KLQ D
Sbjct: 239 QFASWACGKTSSSIVALTVVAMWVGSNLARYAPLPQGALLTLLYMSIKLQAD 290

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482129|ref|XP_002276836.2| PREDICTED: uncharacterized protein LOC100260668 [Vitis vinifera]

 Score =  282 bits (722), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 164/322 (50%), Positives = 201/322 (62%), Gaps = 57/322 (17%)

Query: 1   MQAQLLVGPITPTTGSDAFSSIIKNSFLISSPRRSTTGSNRHRRTRHRLVVASSSWSSSA 60
           MQA+L+VGP +   G    S+  K   L+  PR  + G  R  + R R            
Sbjct: 1   MQARLMVGP-SSINGGGLISAAAKGMILLVDPRTRSHGHGRTAKCRCR------------ 47

Query: 61  AAAAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEV 120
             AAING+ DHY VLG++++A+  DIKRAYRLLARKYHPDVSKDS+A EVFK+IR AYE+
Sbjct: 48  --AAINGDQDHYAVLGLSRAASSVDIKRAYRLLARKYHPDVSKDSQAGEVFKSIRLAYEI 105

Query: 121 LSNEVTRIKYDRALKFRTDSDRSRRGNRRYSSEFEDGVRISTWAELRRKLQYERHWKNYN 180
           LSNE TR +YDRAL+F+  +    RG++ Y+ EFED +R   WA+LRRK+Q ER+W+ YN
Sbjct: 106 LSNEATRSQYDRALRFQEHTGWPWRGSQNYNHEFEDRIRTYRWADLRRKMQRERYWERYN 165

Query: 181 SKEEYSSFY--------------RKAPVREVQ---------------------------- 198
           +  +  S Y               + P  EV                             
Sbjct: 166 ANGQNFSAYSETDEIFEEETPDEERGPFTEVLRSAFLSLFLMQTFGSQIALTFTALMAFV 225

Query: 199 EENPDGGYKIGYLIAWILGGRGGILLTLCLSFASWVCGKTSSGVVVLVVVAVWIGSNLAR 258
           +   D GYK+GYLIAWILGGRGGILLTLCLSFASWVCGKTSS VV LVVVA+W+GSNLAR
Sbjct: 226 DRKLDAGYKLGYLIAWILGGRGGILLTLCLSFASWVCGKTSSSVVTLVVVAMWVGSNLAR 285

Query: 259 CAPLPQGALIALLYMSLKLQTD 280
            APLPQGAL+ LLYMS+KLQ D
Sbjct: 286 YAPLPQGALLTLLYMSIKLQVD 307

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123776|ref|XP_002319161.1| predicted protein [Populus trichocarpa] gi|222857537|gb|EEE95084.1| predicted protein [Populus trichocarpa]

 Score =  269 bits (688), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 167/336 (49%), Positives = 208/336 (61%), Gaps = 62/336 (18%)

Query: 1   MQAQLL-VGPITPTTGSDAFSSIIKNSFLISSPRRSTTGS-----NRHRRTRHRLVVASS 54
           MQA+LL VGPI PTT  DA +S   +S +I+  R S  GS     N   ++RHR    ++
Sbjct: 1   MQARLLLVGPI-PTT-IDASASFSSSSSIITGGRNSLIGSWIYHPNLDNKSRHR---KNN 55

Query: 55  SWSSSAAAAA-------ING-EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR 106
            W S+   A+       ING E DHY VLG+ ++AT ADIK+AYR LARKYHPDVSK S+
Sbjct: 56  KWGSTVVVASSSSSWAAINGGEQDHYAVLGLERTATSADIKKAYRFLARKYHPDVSKHSQ 115

Query: 107 AVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRGNRRYSSEFEDGVRISTWAEL 166
           A E+FK+IR AYE+LSNEVTR +YDR L+F+ ++ RS   N+ Y+ E E+ VRI  WAE+
Sbjct: 116 AGELFKSIRHAYEILSNEVTRTQYDRVLRFQEETGRSYSKNQYYAPEVENWVRIYRWAEM 175

Query: 167 RRKLQYERHWKNYNSKEEYSSFY--------------RKAPVREVQ-------------- 198
           +RK + ER+ ++YN  E+  SFY               + P  EV               
Sbjct: 176 KRKTRSERYREHYNVSED-PSFYSETEEEAEEGSLDQERGPFSEVLRSAFISLFLLHTFG 234

Query: 199 --------------EENPDGGYKIGYLIAWILGGRGGILLTLCLSFASWVCGKTSSGVVV 244
                         +   D GYKIGYLIAWILGGRGGI L LCL FASW CGK SS +V 
Sbjct: 235 SLLSLAFSSLMALFDRQLDAGYKIGYLIAWILGGRGGISLVLCLQFASWACGKRSSSMVA 294

Query: 245 LVVVAVWIGSNLARCAPLPQGALIALLYMSLKLQTD 280
           LVVVA+W+GSNLAR APLPQGAL+ LLYMS+KLQ D
Sbjct: 295 LVVVAMWVGSNLARFAPLPQGALVTLLYMSIKLQAD 330

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739762|emb|CBI29944.3| unnamed protein product [Vitis vinifera]

 Score =  267 bits (683), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 154/295 (52%), Positives = 187/295 (63%), Gaps = 56/295 (18%)

Query: 28  LISSPRRSTTGSNRHRRTRHRLVVASSSWSSSAAAAAINGEPDHYKVLGVAQSATLADIK 87
           L+  PR  + G  R  + R R              AAING+ DHY VLG++++A+  DIK
Sbjct: 3   LLVDPRTRSHGHGRTAKCRCR--------------AAINGDQDHYAVLGLSRAASSVDIK 48

Query: 88  RAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRGN 147
           RAYRLLARKYHPDVSKDS+A EVFK+IR AYE+LSNE TR +YDRAL+F+  +    RG+
Sbjct: 49  RAYRLLARKYHPDVSKDSQAGEVFKSIRLAYEILSNEATRSQYDRALRFQEHTGWPWRGS 108

Query: 148 RRYSSEFEDGVRISTWAELRRKLQYERHWKNYNSKEEYSSFY--------------RKAP 193
           + Y+ EFED +R   WA+LRRK+Q ER+W+ YN+  +  S Y               + P
Sbjct: 109 QNYNHEFEDRIRTYRWADLRRKMQRERYWERYNANGQNFSAYSETDEIFEEETPDEERGP 168

Query: 194 VREVQ----------------------------EENPDGGYKIGYLIAWILGGRGGILLT 225
             EV                             +   D GYK+GYLIAWILGGRGGILLT
Sbjct: 169 FTEVLRSAFLSLFLMQTFGSQIALTFTALMAFVDRKLDAGYKLGYLIAWILGGRGGILLT 228

Query: 226 LCLSFASWVCGKTSSGVVVLVVVAVWIGSNLARCAPLPQGALIALLYMSLKLQTD 280
           LCLSFASWVCGKTSS VV LVVVA+W+GSNLAR APLPQGAL+ LLYMS+KLQ D
Sbjct: 229 LCLSFASWVCGKTSSSVVTLVVVAMWVGSNLARYAPLPQGALLTLLYMSIKLQVD 283

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446758|ref|XP_004141138.1| PREDICTED: uncharacterized protein LOC101205024 [Cucumis sativus] gi|449515603|ref|XP_004164838.1| PREDICTED: uncharacterized protein LOC101224715 [Cucumis sativus]

 Score =  256 bits (653), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 155/320 (48%), Positives = 202/320 (63%), Gaps = 46/320 (14%)

Query: 1   MQAQLLVGPITPTTGSDAFSSIIKNSFLI--SSPRRSTTGSNRHRRTRHRLVVASSSWSS 58
           MQA  L+GPI P   S A S+I   S LI  S PR  +   N    ++  L +  S+   
Sbjct: 1   MQAHFLLGPI-PIPISSASSAIGFYSSLIADSLPRTYSCNPN----SKSTLPLPRSNSIV 55

Query: 59  SAAAAAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAY 118
           S+ +AAI+G  +HY++LGV  +A+  +IK+A+RLLARKYHPDVSKDSRA + FK+IR AY
Sbjct: 56  SSWSAAIDGHRNHYELLGVPPAASSKEIKKAFRLLARKYHPDVSKDSRAADAFKSIRHAY 115

Query: 119 EVLSNEVTRIKYDRALKFRTDSDRSRRGNRRYSSEFEDGVRISTWAELRRKLQYERHWKN 178
           EVLSNEVTR +YDRALK +  +DR  RG   YS +FE+  +I  W EL++K+QYER+ K 
Sbjct: 116 EVLSNEVTRAQYDRALKLQETTDRPYRGKWYYSPDFEERQKIYRWTELKQKIQYERYHK- 174

Query: 179 YN----------SKEEYSSFYRKAPVREV----------------------------QEE 200
           YN           +E  S    ++P  EV                             + 
Sbjct: 175 YNKFRQDSSRIDEEEGESDSQLRSPFLEVLKSTFLSLFLVQIFGSRLSLTFSSLVALLDR 234

Query: 201 NPDGGYKIGYLIAWILGGRGGILLTLCLSFASWVCGKTSSGVVVLVVVAVWIGSNLARCA 260
             D GYK+GY IAW+LGGR G+LL +CLSFASW+CGK+SSGVV +VVVA+W+G+NLAR A
Sbjct: 235 KLDSGYKMGYAIAWLLGGRAGVLLAICLSFASWMCGKSSSGVVAVVVVAMWMGTNLARYA 294

Query: 261 PLPQGALIALLYMSLKLQTD 280
           PLPQGA++ LLYMS+KLQ D
Sbjct: 295 PLPQGAVLTLLYMSIKLQAD 314

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356571705|ref|XP_003554014.1| PREDICTED: chaperone protein DnaJ-like [Glycine max]

 Score =  251 bits (640), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 159/321 (49%), Positives = 200/321 (62%), Gaps = 57/321 (17%)

Query: 1   MQAQLLVGPITPTTGSDAFSSIIKNSFLISSPRRSTTGSNRHRRTRHRLVVASSSWSSSA 60
           M++ LLVGPI+      A +S   +S        S+T +N  RR R  LV+ASSS     
Sbjct: 1   MESHLLVGPISAARYGCAANSSHFHS------AASSTWANSPRR-RSPLVMASSS----- 48

Query: 61  AAAAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEV 120
            +AA+NG  ++Y VLGVA++AT   IKRAYRLLARKYHPDVSKD  A E+FK+I  AYEV
Sbjct: 49  -SAAVNGGQNYYAVLGVARTATTVQIKRAYRLLARKYHPDVSKDPHAAELFKSIHHAYEV 107

Query: 121 LSNEVTRIKYDRALKFRTDSDRSRRGNRRYSSEFEDGVRISTWAELRRKLQYERHWKNYN 180
           LSNE TR++YD+ L+F     +  R    YS+EFED  R   W  +R+K+  ER+W+NYN
Sbjct: 108 LSNEATRVQYDQELQF---GHKPYREKWSYSTEFEDQARFYRWDRMRKKMDRERYWENYN 164

Query: 181 SKEEY---------------------------SSFYRK--------------APVREVQE 199
             E+Y                           S+F                 + +  + +
Sbjct: 165 VNEDYYTSETDEEEDEVVDLDEERGSFVEVLRSAFMSLFLLQTLGSRFSLTFSSLMALFD 224

Query: 200 ENPDGGYKIGYLIAWILGGRGGILLTLCLSFASWVCGKTSSGVVVLVVVAVWIGSNLARC 259
           +  D GYK+GY+IAWILGGRGGILLTLCLSFASWVCGKTSS VV LVVVA+W+GS LAR 
Sbjct: 225 KKLDTGYKMGYVIAWILGGRGGILLTLCLSFASWVCGKTSSSVVALVVVALWVGSYLARY 284

Query: 260 APLPQGALIALLYMSLKLQTD 280
           APLPQGAL+ALLYMS+KLQ+D
Sbjct: 285 APLPQGALLALLYMSIKLQSD 305

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15238746|ref|NP_197315.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana] gi|9758896|dbj|BAB09472.1| unnamed protein product [Arabidopsis thaliana] gi|20260574|gb|AAM13185.1| unknown protein [Arabidopsis thaliana] gi|28059343|gb|AAO30049.1| unknown protein [Arabidopsis thaliana] gi|332005129|gb|AED92512.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana]

 Score =  246 bits (628), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 155/339 (45%), Positives = 205/339 (60%), Gaps = 63/339 (18%)

Query: 1   MQAQLLVGPITPTTGSDAFSSIIKNSFLI---SSP---------RRSTTGSNRHRRTRHR 48
           MQ  LLVGPI P  G   FSS   +  L+   S+P         RR   G +R  R R +
Sbjct: 1   MQTHLLVGPI-PLKGYRRFSSSSFSGDLLPPSSNPIGRDLFPHRRRHRDGKSRSYRNRSK 59

Query: 49  LVVASSSWSSSAAAAAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAV 108
             + S+++SSS+     N    HY VLG+A++AT  DIKRAYRLLARK+HPDV+KDS+A 
Sbjct: 60  TTITSAAFSSSSNTGGQN----HYAVLGIARNATQGDIKRAYRLLARKFHPDVNKDSKAG 115

Query: 109 EVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRGNRRYSSEFEDGVR-ISTWAELR 167
           E+FK++RC+YEVLSNE TR +YDRALK + +S   R     Y+ E ED ++   TW+E R
Sbjct: 116 ELFKSVRCSYEVLSNEATRTQYDRALKLQENSRFHRVKRHSYTPEVEDAMKYYYTWSEKR 175

Query: 168 RKLQYERHWKNYNSKEEYSSFYRKAPVREVQ--EENPDG--------------------- 204
           ++ ++ R + +Y++    S FY +   +E +  E  PD                      
Sbjct: 176 QRSRHGRFYGHYSTYPN-SHFYAETEPQEEEGVETAPDQRDSFVEALKSAFLSMFLLYTF 234

Query: 205 ---------------------GYKIGYLIAWILGGRGGILLTLCLSFASWVCGKTSSGVV 243
                                GYK+G++IAWILGG+GGILLTLCL+FASW+CGK SS VV
Sbjct: 235 GCLASLTFSTFTALLDKELDMGYKVGFMIAWILGGKGGILLTLCLTFASWLCGKASSSVV 294

Query: 244 VLVVVAVWIGSNLARCAPLPQGALIALLYMSLKLQTDSS 282
           VLV+VA+W+GSNLAR APLPQGAL+ LLYMS+KLQ DS+
Sbjct: 295 VLVLVAMWVGSNLARHAPLPQGALLTLLYMSIKLQVDST 333

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224145988|ref|XP_002325839.1| predicted protein [Populus trichocarpa] gi|222862714|gb|EEF00221.1| predicted protein [Populus trichocarpa]

 Score =  240 bits (613), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 162/333 (48%), Positives = 198/333 (59%), Gaps = 54/333 (16%)

Query: 1   MQAQL-LVGPITPTTGSDAFSSII------KNSFL--ISSPRRSTTGSNRHRRTRHR-LV 50
           MQA L LVGPI  T  + A SS         NS     S  R+ +  S+ H++   R   
Sbjct: 1   MQAHLFLVGPIPATIDASASSSSSSISRGGHNSPTRSWSRHRKCSNKSHHHKKNNKRGPT 60

Query: 51  VASSSWSSSAAAAAING-EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVE 109
               + SSS++ AA NG E DHY VLG+ ++AT ADIK+AYRLLARKYHPDVSK S+A E
Sbjct: 61  TVVVASSSSSSWAAFNGGEQDHYAVLGLERTATSADIKKAYRLLARKYHPDVSKHSQACE 120

Query: 110 VFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRGNRRYSSEFEDGVRISTWAELRRK 169
           +FK++R AYE+L NEVTR +YDR L+F+ D+ RS      Y+ E ED  RI  WAE++RK
Sbjct: 121 LFKSVRHAYEILFNEVTRARYDRVLRFQEDTGRSYSKRHYYTPEVEDWGRIYKWAEMKRK 180

Query: 170 LQYERHWKNYNSKEEYSSFY--------------RKAPVREVQ----------------- 198
           ++   HW++YN  E+  SFY               + P  EV                  
Sbjct: 181 MRSGAHWEHYNVSED-PSFYSDTEEEAEEGSLDQERGPFSEVLRSAFLSLFLLQTLGSLS 239

Query: 199 -----------EENPDGGYKIGYLIAWILGGRGGILLTLCLSFASWVCGKTSSGVVVLVV 247
                      +   D GYKIGY IAWILGGRGGILL LCL FASW CGKTSS VV LVV
Sbjct: 240 SLTFSSLMALFDRQLDAGYKIGYFIAWILGGRGGILLVLCLQFASWACGKTSSSVVALVV 299

Query: 248 VAVWIGSNLARCAPLPQGALIALLYMSLKLQTD 280
           VA+ +GSNLAR APLP GAL+ LLYMS+KLQ D
Sbjct: 300 VALCVGSNLARVAPLPHGALVTLLYMSIKLQAD 332

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297807841|ref|XP_002871804.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297317641|gb|EFH48063.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata]

 Score =  236 bits (602), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 154/332 (46%), Positives = 200/332 (60%), Gaps = 51/332 (15%)

Query: 1   MQAQLLVGPITPTTGSDAFSSIIKNSFLISSPR------------RSTTGSNRHRRTRHR 48
           MQ  LLVGPI P  G   FSS         S              R   G +R  RTR +
Sbjct: 1   MQTHLLVGPI-PLKGCRRFSSSFSGDLFPPSSNPFGGDLQHHHRRRHRDGRSRCHRTRSK 59

Query: 49  LVVASSSWSSSAAAAAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAV 108
             V S+++SSS+++A+  G  +HY VLG+A++AT  DIKRAYRLLARK+HPDV+KDS+A 
Sbjct: 60  TTVTSAAYSSSSSSASNTGGQNHYVVLGIARNATQVDIKRAYRLLARKFHPDVNKDSKAG 119

Query: 109 EVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRGNRRYSSEFEDGVR-ISTWAELR 167
           E+FKTIRC+YEVLSNE TR +YDRALK + +S   R     Y+ E ED +    +W E R
Sbjct: 120 ELFKTIRCSYEVLSNEATRTQYDRALKIQENSRFHRVKRHNYTPEVEDAMNYYYSWYEKR 179

Query: 168 -RKLQYERHWKNY--------------NSKEEYSSFYRK--------------------- 191
            R  QY  +  ++               ++++  SF                        
Sbjct: 180 HRSRQYSTYPNSHFYTETEPQEEEEVETAQDQRDSFVEALRSALLSMFLLYTFGCLASLT 239

Query: 192 -APVREVQEENPDGGYKIGYLIAWILGGRGGILLTLCLSFASWVCGKTSSGVVVLVVVAV 250
            +    + ++  D GYK+G++IAWILGG+GGILLTLCL+FASW+CGK SS VVVLVVVA+
Sbjct: 240 FSTFTALLDKELDMGYKVGFMIAWILGGKGGILLTLCLTFASWLCGKASSSVVVLVVVAM 299

Query: 251 WIGSNLARCAPLPQGALIALLYMSLKLQTDSS 282
           W+GSNLAR APLPQGAL+ LLYMS+KLQ DS+
Sbjct: 300 WVGSNLARHAPLPQGALLTLLYMSIKLQVDST 331

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|383145888|gb|AFG54553.1| Pinus taeda anonymous locus UMN_777_01 genomic sequence gi|383145891|gb|AFG54556.1| Pinus taeda anonymous locus UMN_777_01 genomic sequence

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/78 (51%), Positives = 55/78 (70%)

Query: 205 GYKIGYLIAWILGGRGGILLTLCLSFASWVCGKTSSGVVVLVVVAVWIGSNLARCAPLPQ 264
           GYK+ ++IAW++GG  GILL L LSF SW CG     +V L+ +A+W+G  L R AP+PQ
Sbjct: 3   GYKLAHMIAWLIGGERGILLILGLSFTSWYCGNAYDSLVALIALALWMGVELVRFAPIPQ 62

Query: 265 GALIALLYMSLKLQTDSS 282
           GA++A+ YM  KLQ + S
Sbjct: 63  GAILAMTYMCFKLQLELS 80

Source: Pinus taeda

Species: Pinus taeda

Genus: Pinus

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
TAIR|locus:2172374	333	AT5G18140 [Arabidopsis thalian	0.698	0.591	0.412	4.8e-52
TAIR|locus:2041258	442	AT2G22360 [Arabidopsis thalian	0.241	0.153	0.558	5e-14
TIGR_CMR|BA_4538	371	BA_4538 "chaperone protein dna	0.223	0.169	0.539	5.1e-14
TIGR_CMR|CHY_0416	381	CHY_0416 "chaperone protein dn	0.223	0.165	0.593	5.5e-14
TAIR|locus:2140035	447	AT4G39960 [Arabidopsis thalian	0.241	0.152	0.544	8.4e-14
TAIR|locus:2174239	268	AT5G59610 [Arabidopsis thalian	0.429	0.451	0.375	1e-13
UNIPROTKB|Q74B05	313	GSU2406 "DnaJ domain protein"	0.315	0.284	0.451	2.2e-13
TIGR_CMR|GSU_2406	313	GSU_2406 "dnaJ domain protein"	0.315	0.284	0.451	2.2e-13
TIGR_CMR|CJE_1364	297	CJE_1364 "co-chaperone protein	0.216	0.205	0.540	4.4e-13
TAIR|locus:2119465	197	J20 "AT4G13830" [Arabidopsis t	0.443	0.634	0.373	5.6e-13

TAIR|locus:2172374 AT5G18140 [Arabidopsis thaliana (taxid:3702)]

 Score = 361 (132.1 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
 Identities = 90/218 (41%), Positives = 125/218 (57%)

Query:     1 MQAQLLVGPITPTTGSDAFSSIIKNSFLI---SSP---------RRSTTGSNRHRRTRHR 48
             MQ  LLVGPI P  G   FSS   +  L+   S+P         RR   G +R  R R +
Sbjct:     1 MQTHLLVGPI-PLKGYRRFSSSSFSGDLLPPSSNPIGRDLFPHRRRHRDGKSRSYRNRSK 59

Query:    49 LVVXXXXXXXXXXXXXINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAV 108
               +               G  +HY VLG+A++AT  DIKRAYRLLARK+HPDV+KDS+A 
Sbjct:    60 TTITSAAFSSSSNT----GGQNHYAVLGIARNATQGDIKRAYRLLARKFHPDVNKDSKAG 115

Query:   109 EVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRGNRRYSSEFEDGVRIS-TWAELR 167
             E+FK++RC+YEVLSNE TR +YDRALK + +S   R     Y+ E ED ++   TW+E R
Sbjct:   116 ELFKSVRCSYEVLSNEATRTQYDRALKLQENSRFHRVKRHSYTPEVEDAMKYYYTWSEKR 175

Query:   168 RKLQYERHWKNYNSKEEYSSFYRKAPVREVQ--EENPD 203
             ++ ++ R + +Y++    S FY +   +E +  E  PD
Sbjct:   176 QRSRHGRFYGHYSTYPN-SHFYAETEPQEEEGVETAPD 212

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2041258 AT2G22360 [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 5.0e-14, P = 5.0e-14
 Identities = 38/68 (55%), Positives = 49/68 (72%)

Query:    65 INGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNE 124
             +  + D+Y VLGV+++AT A+IK AYR LAR YHPDV+KD  A E FK I  AYEVLS++
Sbjct:    81 VRADADYYSVLGVSKNATKAEIKSAYRKLARNYHPDVNKDPGAEEKFKEISNAYEVLSDD 140

Query:   125 VTRIKYDR 132
               +  YDR
Sbjct:   141 EKKSLYDR 148

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

TIGR_CMR|BA_4538 BA_4538 "chaperone protein dnaJ" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 186 (70.5 bits), Expect = 5.1e-14, P = 5.1e-14
 Identities = 34/63 (53%), Positives = 51/63 (80%)

Query:    70 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
             D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +
Sbjct:     5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQ 64

Query:   130 YDR 132
             YD+
Sbjct:    65 YDQ 67

GO:0009408 "response to heat" evidence=ISS

TIGR_CMR|CHY_0416 CHY_0416 "chaperone protein dnaJ" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 186 (70.5 bits), Expect = 5.5e-14, P = 5.5e-14
 Identities = 38/64 (59%), Positives = 49/64 (76%)

Query:    70 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS-RAVEVFKTIRCAYEVLSNEVTRI 128
             D+Y++LGVA++AT  +IK+AYR LARKYHPDV+KD   A E FK I  AYEVLS+   R 
Sbjct:     4 DYYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKRA 63

Query:   129 KYDR 132
             +YD+
Sbjct:    64 RYDQ 67

GO:0006457 "protein folding" evidence=ISS

GO:0009408 "response to heat" evidence=ISS

TAIR|locus:2140035 AT4G39960 [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 8.4e-14, P = 8.4e-14
 Identities = 37/68 (54%), Positives = 49/68 (72%)

Query:    65 INGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNE 124
             +  + D Y VLGV+++AT A+IK AYR LAR YHPDV+KD+ A + FK I  AYE+LS++
Sbjct:    80 VRADTDFYSVLGVSKNATKAEIKSAYRKLARSYHPDVNKDAGAEDKFKEISNAYEILSDD 139

Query:   125 VTRIKYDR 132
               R  YDR
Sbjct:   140 EKRSLYDR 147

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

TAIR|locus:2174239 AT5G59610 [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 50/133 (37%), Positives = 76/133 (57%)

Query:    72 YKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKY- 130
             Y++LGV+ SAT  DIKRAYR LA KYHPDV+K++ A E F  I+ AY  L N  +R KY 
Sbjct:    75 YEILGVSPSATPQDIKRAYRKLALKYHPDVNKEANAQEKFLKIKHAYTTLINSDSRRKYG 134

Query:   131 -DRALKFRTDSDRSRRGNRRYSSEFEDGVRISTWAELRRKLQYE-RHWK-NYNSKEEYSS 187
              D      +    SR+GN +   +F  G+      +  + LQ E ++W+ + +S+ +  S
Sbjct:   135 SDSRATGSSTGQTSRKGNSQVEEDFY-GL-----GDFFKDLQEEYKNWEASASSQGKPKS 188

Query:   188 FYRKAPVREVQEE 200
              + +  + E+ EE
Sbjct:   189 LWEE--LSEIGEE 199

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|Q74B05 GSU2406 "DnaJ domain protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 178 (67.7 bits), Expect = 2.2e-13, P = 2.2e-13
 Identities = 42/93 (45%), Positives = 56/93 (60%)

Query:    70 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
             D+Y +LGV+++AT  +++RAYR LARKYHPD++K   A E FK I  AYEVLS+   R  
Sbjct:     6 DYYAILGVSKTATQEEVQRAYRKLARKYHPDINKAGDAEEKFKQINEAYEVLSDPDKRAT 65

Query:   130 YDRALKFRTDSDRSRRGNRRYSSEFEDGVRIST 162
             YD+  +   D D  R G + Y      G   ST
Sbjct:    66 YDQLGR---DWD-GRHGTQGYQGGDNAGHHFST 94

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|GSU_2406 GSU_2406 "dnaJ domain protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 178 (67.7 bits), Expect = 2.2e-13, P = 2.2e-13
 Identities = 42/93 (45%), Positives = 56/93 (60%)

Query:    70 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
             D+Y +LGV+++AT  +++RAYR LARKYHPD++K   A E FK I  AYEVLS+   R  
Sbjct:     6 DYYAILGVSKTATQEEVQRAYRKLARKYHPDINKAGDAEEKFKQINEAYEVLSDPDKRAT 65

Query:   130 YDRALKFRTDSDRSRRGNRRYSSEFEDGVRIST 162
             YD+  +   D D  R G + Y      G   ST
Sbjct:    66 YDQLGR---DWD-GRHGTQGYQGGDNAGHHFST 94

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CJE_1364 CJE_1364 "co-chaperone protein DnaJ" [Campylobacter jejuni RM1221 (taxid:195099)]

 Score = 177 (67.4 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 33/61 (54%), Positives = 47/61 (77%)

Query:    72 YKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYD 131
             Y+ LGV+++A+  +IK+AYR LARKYHPD++K+  A E FK I  AYE+LS+E  R +YD
Sbjct:     5 YETLGVSKNASADEIKKAYRRLARKYHPDINKEKGAEEKFKEINAAYEILSDEKKRAQYD 64

Query:   132 R 132
             +
Sbjct:    65 Q 65

GO:0006457 "protein folding" evidence=ISS

GO:0006950 "response to stress" evidence=ISS

TAIR|locus:2119465 J20 "AT4G13830" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 50/134 (37%), Positives = 70/134 (52%)

Query:    72 YKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEV---FKTIRCAYEVLSNEVTRI 128
             Y +LGV +S TL +IK+AY+ LARKYHPDVS   R  E    F  ++ AYE LS+   R+
Sbjct:    68 YDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRRRV 127

Query:   129 KYDRALKFRTDSDRSRRGNRRYSSEFEDGVRISTW-AELRRKLQYERHWKNYNSKEEYSS 187
              YDR L        S R   RY  E  +    S W A+ + +L   R  +  N K+  + 
Sbjct:   128 LYDRDLSMGFSFSFSGRRQNRYDQEVVE--EKSEWKAKWQTQLSGLR--RRSNQKDNNTM 183

Query:   188 FYRKAPVREVQEEN 201
              +  A +R  Q+E+
Sbjct:   184 SWA-ARMRRQQQES 196

GO:0006457 "protein folding" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0015996 "chlorophyll catabolic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	282
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	8e-24
pfam00226	63	pfam00226, DnaJ, DnaJ domain	6e-23
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	9e-22
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	5e-21
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	4e-20
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	4e-19
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	5e-19
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	5e-18
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	6e-18
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	7e-18
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	8e-18
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	9e-18
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	1e-17
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	3e-17
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	5e-17
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	2e-16
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	4e-16
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	6e-16
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	1e-15
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	6e-15
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	2e-14
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	3e-14
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	3e-14
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	4e-14
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	7e-14
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	1e-13
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	4e-13
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	5e-13
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	7e-13
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	7e-13
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	1e-12
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	1e-12
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	4e-12
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	1e-11
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	1e-09
COG5407	610	COG5407, SEC63, Preprotein translocase subunit Sec	3e-09
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	3e-09
PRK09430	267	PRK09430, djlA, Dna-J like membrane chaperone prot	1e-07
COG5269	379	COG5269, ZUO1, Ribosome-associated chaperone zuoti	1e-05
PTZ00341	1136	PTZ00341, PTZ00341, Ring-infected erythrocyte surf	0.003
COG1076	174	COG1076, DjlA, DnaJ-domain-containing proteins 1 [	0.003

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score = 98.4 bits (246), Expect = 8e-24
 Identities = 34/63 (53%), Positives = 47/63 (74%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y++LGV++ A+  +IK+AYR LA+KYHPD +KD  A E FK I  AYEVLS+   R +
Sbjct: 1   DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQ 60

Query: 130 YDR 132
           YD+
Sbjct: 61  YDQ 63

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score = 88.7 bits (221), Expect = 6e-23
 Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRI 128
           D+Y++LGV + A+  +IK+AYR LA KYHPD +  D  A E FK I  AYEVLS+   R 
Sbjct: 1   DYYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEVLSDPEKRA 60

Query: 129 KYD 131
            YD
Sbjct: 61  IYD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score = 93.2 bits (232), Expect = 9e-22
 Identities = 34/63 (53%), Positives = 50/63 (79%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y+VLGV++SA+  +IK+AYR L++KYHPD++K+  A E FK I  AYEVLS++  R +
Sbjct: 5   DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQ 64

Query: 130 YDR 132
           YD+
Sbjct: 65  YDQ 67

Length = 376

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score = 90.8 bits (226), Expect = 5e-21
 Identities = 35/63 (55%), Positives = 48/63 (76%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y++LGV++ A   ++KRAYR LARKYHPDV+K+  A + FK I  AYEVLS+  TR +
Sbjct: 4   DYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRAR 63

Query: 130 YDR 132
           YD+
Sbjct: 64  YDQ 66

Length = 374

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score = 88.5 bits (220), Expect = 4e-20
 Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR-AVEVFKTIRCAYEVLSNEVTRI 128
           D+Y++LGV++ A+  +IK+AYR LA+KYHPD +   + A E FK I  AYEVLS+   R 
Sbjct: 5   DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRA 64

Query: 129 KYDR 132
            YD+
Sbjct: 65  AYDQ 68

Length = 371

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 78.8 bits (195), Expect = 4e-19
 Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 69  PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--RAVEVFKTIRCAYEVLSNE 124
            D+Y++LGV + A+L +IK+AYR LA KYHPD +      A E FK I  AYEVLS+ 
Sbjct: 1   TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDP 58

Length = 60

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 78.4 bits (194), Expect = 5e-19
 Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS-RAVEVFKTIRCAYEVLSN 123
           D+Y +LGV   A+  +IK+AYR LA KYHPD + D   A E FK I  AYEVLS+
Sbjct: 1   DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score = 82.6 bits (204), Expect = 5e-18
 Identities = 35/63 (55%), Positives = 47/63 (74%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y+VLGV ++A   +IK+AYR LARKYHPDVS++  A E FK I  AY VLS++  R +
Sbjct: 6   DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQR 65

Query: 130 YDR 132
           YD+
Sbjct: 66  YDQ 68

Length = 378

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score = 81.4 bits (201), Expect = 6e-18
 Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 5/92 (5%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y ++GV  +  L  IK AYR LARKYHPDVSK+  A   FK +  A+EVLS+E  R +
Sbjct: 5   DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAE 64

Query: 130 YDRALKFRTDSDRSRR----GNRRYSSE-FED 156
           YD+  + R D   +R+      + +++E F+D
Sbjct: 65  YDQLWQHRNDPQFNRQFQHGDGQSFNAEDFDD 96

Length = 306

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score = 82.0 bits (203), Expect = 7e-18
 Identities = 34/62 (54%), Positives = 44/62 (70%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y +LGV+++A+ A+IKRAYR LAR+ HPDV+ D  A E FK I  AYEVLS+   R  
Sbjct: 4   DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRI 63

Query: 130 YD 131
            D
Sbjct: 64  VD 65

Length = 378

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score = 82.2 bits (203), Expect = 8e-18
 Identities = 40/67 (59%), Positives = 51/67 (76%), Gaps = 1/67 (1%)

Query: 68  EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVT 126
           E D+YKVLGV + AT A+IK+AYR LAR+YHPD +K D++A E FK I  AY+VLS+E  
Sbjct: 8   EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKK 67

Query: 127 RIKYDRA 133
           R +YD A
Sbjct: 68  RKEYDEA 74

Length = 389

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score = 82.1 bits (203), Expect = 9e-18
 Identities = 28/63 (44%), Positives = 45/63 (71%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           ++Y  LGV++ A+  +IK+AYR L++KYHPD++K+  A E +K ++ AYE LS+   R  
Sbjct: 5   EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAA 64

Query: 130 YDR 132
           YD+
Sbjct: 65  YDQ 67

Length = 380

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score = 81.4 bits (201), Expect = 1e-17
 Identities = 34/62 (54%), Positives = 46/62 (74%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y++LGV+++AT  +IK+AYR LARKYHPD +K+  A E FK I  AY+VLS+   R  
Sbjct: 4   DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKL 63

Query: 130 YD 131
           YD
Sbjct: 64  YD 65

Length = 382

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score = 80.2 bits (199), Expect = 3e-17
 Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEV-FKTIRCAYEVLSNEVTRI 128
           D+Y+VLGV+++A+  +IK+AYR LA KYHPD +   +  E  FK I+ AYEVLS+   R 
Sbjct: 5   DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRA 64

Query: 129 KYDR 132
            YD+
Sbjct: 65  AYDQ 68

Length = 371

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 80.6 bits (198), Expect = 5e-17
 Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 11/128 (8%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y+VLG+ + A   +IK+A+R LA+KYHPD +K   A  +F  I  A +VLSN   R  
Sbjct: 3   DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRAN 62

Query: 130 YDR----------ALKFRTDSDRSRRGNRRYSSEFEDGVRISTWAELRRKLQYERHWKNY 179
           YD+             F+ D   S       S EF++     T ++ ++K + ++ W   
Sbjct: 63  YDKYGHDGVDREDDFDFQADVFNSFFEEINKSGEFDNITDDDTPSKKKKK-KKKKGWFWA 121

Query: 180 NSKEEYSS 187
            SK+E  +
Sbjct: 122 KSKQESKT 129

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score = 78.3 bits (193), Expect = 2e-16
 Identities = 35/64 (54%), Positives = 48/64 (75%), Gaps = 1/64 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR-AVEVFKTIRCAYEVLSNEVTRI 128
           D+Y+VLGV++SA   +IK+AYR LA KYHPD + D++ A E FK +  AYEVLSN+  R 
Sbjct: 4   DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRR 63

Query: 129 KYDR 132
           +YD+
Sbjct: 64  RYDQ 67

Length = 397

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score = 77.2 bits (190), Expect = 4e-16
 Identities = 33/63 (52%), Positives = 46/63 (73%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y++LG+++ A++ DIK+AYR LA KYHPD +K+  A E FK I  AY VLS+   R +
Sbjct: 6   DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQ 65

Query: 130 YDR 132
           YDR
Sbjct: 66  YDR 68

Length = 377

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score = 76.8 bits (189), Expect = 6e-16
 Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRI 128
           D+Y++LGV ++AT  +IK+AYR LA+KYHPD++  D  A + FK I  AYE+LS+   R 
Sbjct: 6   DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRA 65

Query: 129 KYDR 132
           +YD+
Sbjct: 66  QYDQ 69

Length = 386

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score = 74.6 bits (183), Expect = 1e-15
 Identities = 32/63 (50%), Positives = 43/63 (68%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y +LGV ++A+  +IK+A++ LARKYHPDV+K   A E FK I  AY VLS+   R  
Sbjct: 5   DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRI 64

Query: 130 YDR 132
           YD 
Sbjct: 65  YDT 67

Length = 291

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score = 73.8 bits (181), Expect = 6e-15
 Identities = 32/63 (50%), Positives = 43/63 (68%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y++LGV+++A+  +IK AYR LA KYHPD +K+  A E F  I  AY VLS+   R  
Sbjct: 3   DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAH 62

Query: 130 YDR 132
           YDR
Sbjct: 63  YDR 65

Length = 371

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score = 72.1 bits (177), Expect = 2e-14
 Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 4/83 (4%)

Query: 68  EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVT 126
           E D YK LGV+  A+  +IK+AYR LAR+ HPD +  D  A E FK +  A++VLS+   
Sbjct: 8   EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAK 67

Query: 127 RIKYD--RALKFRTDSDRSRRGN 147
           R +YD  R L F       RR +
Sbjct: 68  RKEYDETRRL-FAGGGFGGRRFD 89

Length = 392

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score = 71.6 bits (175), Expect = 3e-14
 Identities = 30/63 (47%), Positives = 47/63 (74%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y+VLGV ++A++ ++K+AYR LARKYHPDV+K   A + FK ++ AY+ LS+   +  
Sbjct: 5   DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAH 64

Query: 130 YDR 132
           YD+
Sbjct: 65  YDQ 67

Length = 371

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score = 71.8 bits (176), Expect = 3e-14
 Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDV-SKDSRAVEVFKTIRCAYEVLSNEVTRI 128
           D+Y +LGV+++A+  +IK+AYR LA KYHPD    D+ A + FK +  AYEVLS+   R 
Sbjct: 2   DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRE 61

Query: 129 KYDR 132
            YDR
Sbjct: 62  SYDR 65

Length = 391

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score = 71.2 bits (174), Expect = 4e-14
 Identities = 30/63 (47%), Positives = 45/63 (71%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y++LGV+++A+ AD+K+AY  LA++YHPD +    A + FK I  AY+VL +E  R  
Sbjct: 4   DYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAA 63

Query: 130 YDR 132
           YDR
Sbjct: 64  YDR 66

Length = 372

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score = 70.3 bits (172), Expect = 7e-14
 Identities = 32/65 (49%), Positives = 47/65 (72%), Gaps = 2/65 (3%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR--AVEVFKTIRCAYEVLSNEVTR 127
           D+YK+LGV ++A+  DIK+A+R LA+K+HPD+   ++  A E FK I  AYEVLS+   R
Sbjct: 4   DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKR 63

Query: 128 IKYDR 132
            +YD+
Sbjct: 64  RQYDQ 68

Length = 365

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score = 69.8 bits (171), Expect = 1e-13
 Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRI 128
           D+Y+VLG+ + A+  +IK+A+R LA KYHPD +K +  A E FK I  AY+VLS+   + 
Sbjct: 5   DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKA 64

Query: 129 KYDR 132
           +YD+
Sbjct: 65  QYDQ 68

Length = 380

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score = 68.4 bits (167), Expect = 4e-13
 Identities = 26/63 (41%), Positives = 45/63 (71%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y+VLGV+++A+  +I++AYR LA++YHPD++K   A +    I  A +VL ++  R +
Sbjct: 5   DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQ 64

Query: 130 YDR 132
           YD+
Sbjct: 65  YDQ 67

Length = 372

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score = 68.3 bits (167), Expect = 5e-13
 Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 72  YKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYD 131
           Y+VL +++  T ++IK+AYR LA K+HPD   D    E FK I  AYEVLS+   R  YD
Sbjct: 31  YEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDP---EKFKEISRAYEVLSDPEKRKIYD 87

Query: 132 RA 133
             
Sbjct: 88  EY 89

Length = 421

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score = 67.7 bits (165), Expect = 7e-13
 Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 1/64 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVE-VFKTIRCAYEVLSNEVTRI 128
           D+Y++LG+++ A+  +IK+AYR +A KYHPD +K ++  E +FK    AYEVL ++  R 
Sbjct: 4   DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRA 63

Query: 129 KYDR 132
           +YDR
Sbjct: 64  QYDR 67

Length = 365

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 66.4 bits (161), Expect = 7e-13
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 8/135 (5%)

Query: 69  PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD--SRAVEVFKTIRCAYEVLSNEVT 126
            D+Y++LGV  +A+L +IK+AYR LA KYHPD +      A E FK I  AYE+LS+   
Sbjct: 6   LDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPER 65

Query: 127 RIKYDRALKF----RTDSDRSRRGNRRYSSEFEDGVRISTWAELRRKLQYERHWKNYNSK 182
           R +YD+              S       S +         W   R K + +    +  S+
Sbjct: 66  RAEYDKIGADNYFPGKSYRESAAFPIEGSLQLTGL--YEEWRGKRNKTERKASLADLLSR 123

Query: 183 EEYSSFYRKAPVREV 197
                    +   + 
Sbjct: 124 GLSGLAAALSLFADE 138

Length = 237

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score = 67.1 bits (164), Expect = 1e-12
 Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS-RAVEVFKTIRCAYEVLSNEVTRI 128
           D+Y+VLGV++ A+  +IK+AYR LA +YHPD + D+  A + FK    AYEVL +   R 
Sbjct: 5   DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRA 64

Query: 129 KYDR 132
           +YDR
Sbjct: 65  RYDR 68

Length = 373

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score = 66.7 bits (163), Expect = 1e-12
 Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 2/65 (3%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR--AVEVFKTIRCAYEVLSNEVTR 127
           D+Y++LGV+++AT  +IKRAY+ L +++HPD   ++R  A + FK I+ AYEVLS+   R
Sbjct: 5   DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKR 64

Query: 128 IKYDR 132
             YDR
Sbjct: 65  AMYDR 69

Length = 369

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score = 65.6 bits (160), Expect = 4e-12
 Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 1/64 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRI 128
           D+Y+VLGV+++AT+ +IK+AYR  A +YHPD +  D  A E FK    AY+VLS+   R 
Sbjct: 6   DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRS 65

Query: 129 KYDR 132
           +YD+
Sbjct: 66  RYDQ 69

Length = 386

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score = 64.0 bits (156), Expect = 1e-11
 Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRI 128
           D+Y++LGV + A+  +IK++YR LA KYHPD +  D  A E+FK    AYEVLS+   R 
Sbjct: 5   DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRG 64

Query: 129 KYDR 132
            YD+
Sbjct: 65  IYDQ 68

Length = 366

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score = 58.1 bits (140), Expect = 1e-09
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 68  EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVT 126
           E  +Y +LGV++SA   +IK AYR LA KYHPD +K +  + E FK    AYE+L +   
Sbjct: 3   ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKK 62

Query: 127 RIKYDR 132
           R  YD+
Sbjct: 63  RQAYDQ 68

Length = 372

>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

 Score = 57.3 bits (138), Expect = 3e-09
 Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 6/67 (8%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPD----VSKDSRAV--EVFKTIRCAYEVLSN 123
           D Y++LG+ Q  +  DIK+ YR+L+ K+HPD    +  + R+   E +KTI  AY +L++
Sbjct: 99  DPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTD 158

Query: 124 EVTRIKY 130
           +  R  Y
Sbjct: 159 KKRRENY 165

Length = 610

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score = 56.6 bits (136), Expect = 3e-09
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 68  EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVT 126
           E  +Y++L V + +    IK++YR LA KYHPD +  D  A E FK I  AY VLS+E  
Sbjct: 2   ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKK 61

Query: 127 RIKYDR 132
           R  YDR
Sbjct: 62  RALYDR 67

Length = 369

>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional

 Score = 51.4 bits (124), Expect = 1e-07
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 18/91 (19%)

Query: 53  SSSWSSSAAAAAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPD--VSKD--SRAV 108
              +  +     +    D YKVLGV++S    +IKRAYR L  ++HPD  V+K      +
Sbjct: 187 GGGYQQAQRGPTLE---DAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMM 243

Query: 109 EVFKT----IRCAYEVLSNEVTRIKYDRALK 135
           E+ K     I+ AYE        IK  +  K
Sbjct: 244 EMAKEKAQEIQAAYE-------LIKKQKGFK 267

Length = 267

>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

 Score = 45.8 bits (108), Expect = 1e-05
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 6/71 (8%)

Query: 67  GEPDHYKVLGVAQSATLAD---IKRAYRLLARKYHPDVSKDSRAV---EVFKTIRCAYEV 120
            + D Y +LG+++  T A    I +A++    KYHPD +         E FK I+ A EV
Sbjct: 41  KKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREV 100

Query: 121 LSNEVTRIKYD 131
           L +   R++YD
Sbjct: 101 LGDRKLRLQYD 111

Length = 379

>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional

 Score = 38.6 bits (89), Expect = 0.003
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 3/84 (3%)

Query: 51  VASSSWSSSAAAAAINGEPD--HYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAV 108
            AS     S AA  I   PD   Y +LGV  +A + +I   Y  LA  Y+P     +   
Sbjct: 554 PASDVQQDSEAAPTIE-IPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGF 612

Query: 109 EVFKTIRCAYEVLSNEVTRIKYDR 132
             FK I  AY++L +   +  Y++
Sbjct: 613 HKFKKINEAYQILGDIDKKKMYNK 636

Length = 1136

>gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 37.3 bits (87), Expect = 0.003
 Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 8/75 (10%)

Query: 53  SSSWSSSAAAAAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPD--VSKDSR---- 106
           S        A       D  KVLGV   A    IK+AYR L  + HPD   +K  +    
Sbjct: 97  SELREELEEAREQLDREDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFI 156

Query: 107 --AVEVFKTIRCAYE 119
               E  + I+ AYE
Sbjct: 157 EKLKEKLQEIQEAYE 171

Length = 174

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	282
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.96
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	99.87
PRK14296	372	chaperone protein DnaJ; Provisional	99.87
PRK14288	369	chaperone protein DnaJ; Provisional	99.86
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	99.86
PRK14286	372	chaperone protein DnaJ; Provisional	99.86
PRK14291	382	chaperone protein DnaJ; Provisional	99.85
PRK14287	371	chaperone protein DnaJ; Provisional	99.85
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.84
PRK14279	392	chaperone protein DnaJ; Provisional	99.84
PRK14276	380	chaperone protein DnaJ; Provisional	99.84
PRK14282	369	chaperone protein DnaJ; Provisional	99.84
PRK14298	377	chaperone protein DnaJ; Provisional	99.84
PRK14285	365	chaperone protein DnaJ; Provisional	99.84
PRK14277	386	chaperone protein DnaJ; Provisional	99.83
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	99.83
PRK14283	378	chaperone protein DnaJ; Provisional	99.83
PRK14278	378	chaperone protein DnaJ; Provisional	99.83
PRK14301	373	chaperone protein DnaJ; Provisional	99.82
PRK14280	376	chaperone protein DnaJ; Provisional	99.82
PRK14297	380	chaperone protein DnaJ; Provisional	99.82
PRK14295	389	chaperone protein DnaJ; Provisional	99.82
PRK14294	366	chaperone protein DnaJ; Provisional	99.81
PRK10767	371	chaperone protein DnaJ; Provisional	99.81
PRK14281	397	chaperone protein DnaJ; Provisional	99.81
PRK14284	391	chaperone protein DnaJ; Provisional	99.8
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.8
PRK14300	372	chaperone protein DnaJ; Provisional	99.79
PRK14299	291	chaperone protein DnaJ; Provisional	99.77
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.77
PRK14290	365	chaperone protein DnaJ; Provisional	99.77
PRK14289	386	chaperone protein DnaJ; Provisional	99.77
PRK14293	374	chaperone protein DnaJ; Provisional	99.76
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	99.76
PRK14292	371	chaperone protein DnaJ; Provisional	99.75
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	99.75
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	99.73
PRK10266	306	curved DNA-binding protein CbpA; Provisional	99.71
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	99.71
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	99.69
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.69
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.68
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.66
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	99.61
PHA03102	153	Small T antigen; Reviewed	99.6
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	99.6
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.59
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	99.54
PRK05014	171	hscB co-chaperone HscB; Provisional	99.49
PRK01356	166	hscB co-chaperone HscB; Provisional	99.49
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	99.49
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	99.46
PRK00294	173	hscB co-chaperone HscB; Provisional	99.44
PRK03578	176	hscB co-chaperone HscB; Provisional	99.44
PTZ00100	116	DnaJ chaperone protein; Provisional	99.37
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	99.33
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	99.32
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.32
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	99.31
PHA02624	647	large T antigen; Provisional	99.3
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	99.16
PRK01773	173	hscB co-chaperone HscB; Provisional	99.12
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	99.02
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	99.0
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	98.4
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	98.4
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	98.32
KOG3192	168	consensus Mitochondrial J-type chaperone [Posttran	97.68
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.85
KOG0431	453	consensus Auxilin-like protein and related protein	96.62
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.23
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	95.85
KOG0724	335	consensus Zuotin and related molecular chaperones	88.37
PF13446	62	RPT: A repeated domain in UCH-protein	84.89
PF11833	194	DUF3353: Protein of unknown function (DUF3353); In	83.46

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.96  E-value=2.3e-29  Score=235.17  Aligned_cols=157  Identities=25%  Similarity=0.314  Sum_probs=116.1

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-chHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccCCCCCCcCCC
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRG  146 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~~~~~~~~~~  146 (282)
                      .+|||+||||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||+|||||++|+.||+++......+... +
T Consensus         3 ~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~g-g   81 (371)
T COG0484           3 KRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFG-G   81 (371)
T ss_pred             ccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcC-C
Confidence            579999999999999999999999999999999999 78899999999999999999999999999988665421111 1


Q ss_pred             CccCCccccccccccchHHHHHHHHH-HHH---HhhhccccccccccccchhHHhh---hhcCCCCccccceeeeecCCC
Q 023421          147 NRRYSSEFEDGVRISTWAELRRKLQY-ERH---WKNYNSKEEYSSFYRKAPVREVQ---EENPDGGYKIGYLIAWILGGR  219 (282)
Q Consensus       147 ~~~~~~~f~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~e~~leE~~---ek~~~~g~k~g~~i~~~~GG~  219 (282)
                      .  ....|..     ++.++...... ...   ..+-...+.+..+..+.+|+|+.   ++.+.......|..|.++|++
T Consensus        82 ~--g~~~fgg-----~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak  154 (371)
T COG0484          82 F--GFGGFGG-----DFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAK  154 (371)
T ss_pred             C--CcCCCCC-----CHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCC
Confidence            0  0111111     22222222110 000   00011133444566788899988   678889999999999999999


Q ss_pred             CceeehhhhhhHH
Q 023421          220 GGILLTLCLSFAS  232 (282)
Q Consensus       220 ~G~~l~~c~~cs~  232 (282)
                      +|.-+..|..|.-
T Consensus       155 ~gt~~~tC~tC~G  167 (371)
T COG0484         155 PGTDPKTCPTCNG  167 (371)
T ss_pred             CCCCCCcCCCCCC
Confidence            9999999999863

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.87  E-value=1.1e-22  Score=186.32  Aligned_cols=76  Identities=45%  Similarity=0.618  Sum_probs=69.0

Q ss_pred             hhCCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccCCC
Q 023421           64 AINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTD  139 (282)
Q Consensus        64 ~~~~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~~~  139 (282)
                      .....+|||+||||+++|+..|||+||||||++||||||++ +.|.+.|++|+.||+|||||++|+.||+++..+..
T Consensus        11 ~v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~   87 (336)
T KOG0713|consen   11 AVLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLK   87 (336)
T ss_pred             hhhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhc
Confidence            33456899999999999999999999999999999999985 67999999999999999999999999999865533

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.87  E-value=1.3e-22  Score=192.83  Aligned_cols=69  Identities=38%  Similarity=0.592  Sum_probs=65.5

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      ..|||+||||+++|+.+|||+|||+||++||||+++++.++++|++|++||+||+||++|+.||+++..
T Consensus         3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~   71 (372)
T PRK14296          3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHA   71 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccch
Confidence            469999999999999999999999999999999998888999999999999999999999999998754

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.86  E-value=3.6e-22  Score=189.58  Aligned_cols=69  Identities=46%  Similarity=0.611  Sum_probs=64.5

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-chHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      ..|||+||||+++||.+|||+|||+||++||||+++ ++.++++|++|++||+||+||.+|+.||+++..
T Consensus         2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~   71 (369)
T PRK14288          2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKK   71 (369)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhccc
Confidence            379999999999999999999999999999999997 466899999999999999999999999998754

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.86  E-value=4.9e-22  Score=183.68  Aligned_cols=73  Identities=44%  Similarity=0.585  Sum_probs=67.0

Q ss_pred             CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccCCCCC
Q 023421           67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSD  141 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~~~~~  141 (282)
                      .+..+|+||||+++|+.+|||+|||+|+++||||||++  +.++|++|++||+|||||++|..||+++..+...+
T Consensus         2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~--~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g   74 (337)
T KOG0712|consen    2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD--AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGG   74 (337)
T ss_pred             cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc--HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhccc
Confidence            35789999999999999999999999999999999998  78999999999999999999999999987655433

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.86  E-value=6.2e-22  Score=188.14  Aligned_cols=70  Identities=44%  Similarity=0.613  Sum_probs=64.8

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-chHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      ..|||+||||+++|+.+|||+|||+||++||||+++ ++.++++|++|++||+||+||.+|+.||+++..+
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g   73 (372)
T PRK14286          3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAG   73 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchh
Confidence            369999999999999999999999999999999987 4568899999999999999999999999987543

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=1.3e-21  Score=186.53  Aligned_cols=69  Identities=49%  Similarity=0.726  Sum_probs=65.4

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++++.++++|++|++||+||+||.+|+.||+++..
T Consensus         2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~   70 (382)
T PRK14291          2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHA   70 (382)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhccc
Confidence            369999999999999999999999999999999998888899999999999999999999999997754

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=1.5e-21  Score=185.41  Aligned_cols=69  Identities=43%  Similarity=0.729  Sum_probs=65.2

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++++.++++|++|++||+||+||.+|+.||+++..
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~   71 (371)
T PRK14287          3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHT   71 (371)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCc
Confidence            369999999999999999999999999999999998777899999999999999999999999998754

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.84  E-value=3.3e-21  Score=185.37  Aligned_cols=66  Identities=44%  Similarity=0.575  Sum_probs=61.5

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      ..|||+||||+++|+.+|||+|||+||++|||||+++   .++|++|++||+||+||.+|+.||+++..
T Consensus        27 ~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~---~e~F~~i~~AYevLsD~~kR~~YD~~G~~   92 (421)
T PTZ00037         27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD---PEKFKEISRAYEVLSDPEKRKIYDEYGEE   92 (421)
T ss_pred             chhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch---HHHHHHHHHHHHHhccHHHHHHHhhhcch
Confidence            3699999999999999999999999999999999864   48999999999999999999999997654

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.84  E-value=2.5e-21  Score=185.12  Aligned_cols=68  Identities=46%  Similarity=0.692  Sum_probs=64.0

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-chHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      .+|||+||||+++|+.+|||+|||+||++||||+++ ++.++++|++|++||+||+||++|+.||+++.
T Consensus         8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~   76 (392)
T PRK14279          8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRR   76 (392)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence            479999999999999999999999999999999987 45689999999999999999999999999864

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.84  E-value=2.8e-21  Score=184.21  Aligned_cols=70  Identities=40%  Similarity=0.659  Sum_probs=65.9

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++++.++++|++|++||+||+||.+|+.||+++..+
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~   72 (380)
T PRK14276          3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAG   72 (380)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCcc
Confidence            4799999999999999999999999999999999988789999999999999999999999999987543

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.84  E-value=2.2e-21  Score=184.29  Aligned_cols=70  Identities=43%  Similarity=0.662  Sum_probs=64.4

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc--hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD--SRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.  ..++++|++|++||+||+||.+|+.||+++..+
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~   74 (369)
T PRK14282          3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVG   74 (369)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccc
Confidence            4699999999999999999999999999999999874  458899999999999999999999999976543

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.84  E-value=3e-21  Score=183.71  Aligned_cols=70  Identities=47%  Similarity=0.705  Sum_probs=65.8

Q ss_pred             CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      ...|||+||||+++|+.+|||+|||+||++||||+++++.++++|++|++||+||+||.+|+.||+++..
T Consensus         3 ~~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~   72 (377)
T PRK14298          3 TTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHA   72 (377)
T ss_pred             CCCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCcc
Confidence            3479999999999999999999999999999999998877899999999999999999999999998754

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.84  E-value=4e-21  Score=182.16  Aligned_cols=68  Identities=43%  Similarity=0.674  Sum_probs=63.8

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      .|||+||||+++|+.+|||+|||+|+++||||+++. +.++++|++|++||+||+||.+|..||+++..
T Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~   71 (365)
T PRK14285          3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHT   71 (365)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcc
Confidence            699999999999999999999999999999999874 56889999999999999999999999997654

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.83  E-value=1.1e-20  Score=180.30  Aligned_cols=69  Identities=45%  Similarity=0.706  Sum_probs=64.4

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      ..|||+||||+++|+.+|||+|||+|+++||||++++ +.++++|++|++||+||+||.+|+.||+++..
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~   73 (386)
T PRK14277          4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHA   73 (386)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccc
Confidence            4799999999999999999999999999999999974 56889999999999999999999999997754

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.83  E-value=9.2e-21  Score=174.05  Aligned_cols=145  Identities=30%  Similarity=0.345  Sum_probs=104.6

Q ss_pred             CchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccCCCCCCcCCCCcc
Q 023421           70 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRGNRR  149 (282)
Q Consensus        70 d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~~~~~~~~~~~~~  149 (282)
                      |||+||||+++|+..|||+||++|+++||||.+.++.+.++|++|.+|||||+|+++|..||..+..+.....   +  .
T Consensus        44 d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~~~~~---g--~  118 (288)
T KOG0715|consen   44 DYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQHGEFG---G--N  118 (288)
T ss_pred             chhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcccccc---C--C
Confidence            9999999999999999999999999999999999999999999999999999999999999998875410000   0  0


Q ss_pred             CCccccccccccchHHHHHHHHHHHHHhhhccccccccccccchhHHhhh---hcCCCCccccceeeeecCCCCceeehh
Q 023421          150 YSSEFEDGVRISTWAELRRKLQYERHWKNYNSKEEYSSFYRKAPVREVQE---ENPDGGYKIGYLIAWILGGRGGILLTL  226 (282)
Q Consensus       150 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~leE~~e---k~~~~g~k~g~~i~~~~GG~~G~~l~~  226 (282)
                      ..+.|+..+.   |          .  ..-...+....+....+|+|+..   +.+......-|..|++.|...|....-
T Consensus       119 ~~~~~~~~~~---~----------~--~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~~~~~~~  183 (288)
T KOG0715|consen  119 PFDVFLEFFG---G----------K--MNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSGAEEGAKRES  183 (288)
T ss_pred             ccchHHHhhc---c----------c--ccccccCcccccccccCHHHHhhccccceEEEeecccccccCcCccccccccc
Confidence            0111111111   1          0  00111223444557777888773   345555566777788888888888888


Q ss_pred             hhhhHHhh
Q 023421          227 CLSFASWV  234 (282)
Q Consensus       227 c~~cs~w~  234 (282)
                      |..|+.-.
T Consensus       184 ~~~~~~~~  191 (288)
T KOG0715|consen  184 CKTCSGRG  191 (288)
T ss_pred             chhhhCcc
Confidence            88887655

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.83  E-value=8.2e-21  Score=180.87  Aligned_cols=69  Identities=51%  Similarity=0.739  Sum_probs=65.5

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      ..|||+||||+++|+.+|||+|||+||++||||+++++.++++|++|++||+||+||.+|+.||+++..
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~   72 (378)
T PRK14283          4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHA   72 (378)
T ss_pred             cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhccc
Confidence            579999999999999999999999999999999998778999999999999999999999999997654

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.83  E-value=9e-21  Score=180.54  Aligned_cols=67  Identities=51%  Similarity=0.672  Sum_probs=64.3

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      .|||+||||+++|+.+|||+|||+||++||||+++++.++++|++|++||+||+||.+|+.||+++.
T Consensus         3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~   69 (378)
T PRK14278          3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGD   69 (378)
T ss_pred             CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCC
Confidence            6999999999999999999999999999999999987889999999999999999999999999764

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.82  E-value=1.8e-20  Score=178.18  Aligned_cols=70  Identities=44%  Similarity=0.651  Sum_probs=64.6

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      ..|||+||||+++|+.+|||+|||+|+++||||++++ +.++++|++|++||+||+||.+|+.||+++..+
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g   73 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAG   73 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccc
Confidence            3799999999999999999999999999999999874 568899999999999999999999999987543

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.82  E-value=1.5e-20  Score=178.94  Aligned_cols=69  Identities=49%  Similarity=0.749  Sum_probs=65.5

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      .|||+||||+++|+.+|||+|||+|+++||||+++++.++++|++|++||+||+||.+|+.||+++..+
T Consensus         4 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~   72 (376)
T PRK14280          4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAG   72 (376)
T ss_pred             CChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccc
Confidence            699999999999999999999999999999999988889999999999999999999999999987543

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.82  E-value=2e-20  Score=178.39  Aligned_cols=70  Identities=43%  Similarity=0.625  Sum_probs=64.7

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++. +.++++|++|++||+||+||.+|+.||+++..+
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~   73 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTAD   73 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCccc
Confidence            3699999999999999999999999999999999974 568899999999999999999999999987543

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.82  E-value=1.9e-20  Score=178.97  Aligned_cols=65  Identities=58%  Similarity=0.866  Sum_probs=61.7

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhhHhhhh
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSNEVTRIKYDR  132 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~  132 (282)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++. +.++++|++|++||+||+||.+|+.||+
T Consensus         8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~   73 (389)
T PRK14295          8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDE   73 (389)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHH
Confidence            4699999999999999999999999999999999874 4688999999999999999999999998

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.81  E-value=3.4e-20  Score=175.98  Aligned_cols=69  Identities=43%  Similarity=0.613  Sum_probs=64.5

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++. +.++++|++|++||+||+||.+|+.||+++..
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~   72 (366)
T PRK14294          3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHE   72 (366)
T ss_pred             CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccc
Confidence            4799999999999999999999999999999999974 56889999999999999999999999998754

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.81  E-value=3.4e-20  Score=176.27  Aligned_cols=69  Identities=49%  Similarity=0.703  Sum_probs=64.1

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-chHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++ ++.++++|++|++||+||+||.+|+.||+++..
T Consensus         3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~   72 (371)
T PRK10767          3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHA   72 (371)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhcccc
Confidence            369999999999999999999999999999999987 456889999999999999999999999997654

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.81  E-value=5.8e-20  Score=176.03  Aligned_cols=68  Identities=51%  Similarity=0.715  Sum_probs=63.7

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      .|||+||||+++|+.+|||+|||+|+++||||++++ +.++++|++|++||+||+||.+|+.||+++..
T Consensus         3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~   71 (397)
T PRK14281          3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHA   71 (397)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccch
Confidence            699999999999999999999999999999999974 56789999999999999999999999997654

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.80  E-value=3.3e-20  Score=177.46  Aligned_cols=68  Identities=47%  Similarity=0.664  Sum_probs=63.6

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      .|||+||||+++|+.+|||+|||+|+++||||++++ +.++++|++|++||+||+||.+|+.||+++..
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~   69 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKD   69 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhcccc
Confidence            389999999999999999999999999999999984 56889999999999999999999999998754

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.80  E-value=9.8e-20  Score=172.10  Aligned_cols=68  Identities=50%  Similarity=0.740  Sum_probs=64.0

Q ss_pred             CchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           70 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        70 d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      |||+||||+++|+.+|||+|||+|+++||||+++.+.++++|++|++||+||+||.+|..||+++..+
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~   68 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAG   68 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhccccc
Confidence            79999999999999999999999999999999987778899999999999999999999999976543

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.79  E-value=9.8e-20  Score=173.15  Aligned_cols=68  Identities=44%  Similarity=0.710  Sum_probs=64.4

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      .|||+||||+++|+.+|||+|||+++++||||+++++.++++|++|++||+||+||.+|+.||+++..
T Consensus         3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~   70 (372)
T PRK14300          3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHD   70 (372)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhcccc
Confidence            69999999999999999999999999999999998777889999999999999999999999997653

>PRK14299 chaperone protein DnaJ; Provisional

Probab=99.77  E-value=1.1e-18  Score=160.80  Aligned_cols=69  Identities=46%  Similarity=0.648  Sum_probs=65.5

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++++.++++|++|++||+||+||.+|+.||+++..
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~   71 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTT   71 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCc
Confidence            369999999999999999999999999999999998888999999999999999999999999997754

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.77  E-value=6.2e-19  Score=126.39  Aligned_cols=62  Identities=42%  Similarity=0.739  Sum_probs=59.4

Q ss_pred             CchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchH--HHHHHHHHHHHHHHhhhhhhhHhhh
Q 023421           70 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR--AVEVFKTIRCAYEVLSNEVTRIKYD  131 (282)
Q Consensus        70 d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~--a~~~f~~i~~Ay~vLsdp~~R~~YD  131 (282)
                      |||+||||+++++.++||++|+++++++|||+++...  +.+.|..|++||++|+||.+|+.||
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            6899999999999999999999999999999988755  8899999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.77  E-value=5.6e-19  Score=167.58  Aligned_cols=68  Identities=47%  Similarity=0.719  Sum_probs=63.6

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCch--HHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--RAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~--~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      .|||+||||+++|+.+|||+|||+|++++|||+++..  .++++|++|++||+||+||.+|+.||+++..
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~   72 (365)
T PRK14290          3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTV   72 (365)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCc
Confidence            6999999999999999999999999999999999753  5889999999999999999999999997653

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.77  E-value=7.7e-19  Score=167.82  Aligned_cols=69  Identities=43%  Similarity=0.631  Sum_probs=64.4

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++. +.++++|++|++||+||+||.+|+.||+++..
T Consensus         4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~   73 (386)
T PRK14289          4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHA   73 (386)
T ss_pred             cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhccc
Confidence            4799999999999999999999999999999999974 46889999999999999999999999997654

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=9.8e-19  Score=166.43  Aligned_cols=68  Identities=51%  Similarity=0.784  Sum_probs=64.7

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      .|||+||||+++|+.+|||+|||+|+++||||+++++.++++|++|++||+||+||.+|+.||+++..
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~   70 (374)
T PRK14293          3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEA   70 (374)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhcccc
Confidence            69999999999999999999999999999999998878999999999999999999999999997653

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.76  E-value=6.3e-19  Score=157.06  Aligned_cols=70  Identities=44%  Similarity=0.670  Sum_probs=65.9

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      ..|+|+|||++++|+.++|||+||+|+++||||++++ |++.++|++||+||+||+||.+|..||+++..+
T Consensus        30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~  100 (279)
T KOG0716|consen   30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELG  100 (279)
T ss_pred             hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHH
Confidence            4699999999999999999999999999999999997 779999999999999999999999999986643

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.75  E-value=1.3e-18  Score=165.34  Aligned_cols=68  Identities=47%  Similarity=0.670  Sum_probs=64.7

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      .|||+||||+++|+.++||+|||+|+++||||++++..++++|++|++||+||+||.+|+.||+++..
T Consensus         2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~   69 (371)
T PRK14292          2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTA   69 (371)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCc
Confidence            58999999999999999999999999999999998878999999999999999999999999997654

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.75  E-value=2.3e-18  Score=162.75  Aligned_cols=74  Identities=39%  Similarity=0.539  Sum_probs=68.0

Q ss_pred             CCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchH----HHHHHHHHHHHHHHhhhhhhhHhhhhhhccCCC
Q 023421           66 NGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR----AVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTD  139 (282)
Q Consensus        66 ~~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~----a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~~~  139 (282)
                      .++.|||.+|+|+++||.+|||+|||++++.|||||..+++    |++.|+.|.+|||||+||++|+.||.++..+.+
T Consensus         6 ~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~   83 (546)
T KOG0718|consen    6 LDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK   83 (546)
T ss_pred             cchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence            34569999999999999999999999999999999988654    889999999999999999999999999887755

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.73  E-value=7.5e-18  Score=147.07  Aligned_cols=70  Identities=39%  Similarity=0.628  Sum_probs=63.9

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc---hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD---SRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~---~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      ..|+|+||||.++|+..+||+|||++++++|||+++.   ..+.+.|++++.||.||+|.++|+.||..+...
T Consensus        13 ~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~id   85 (264)
T KOG0719|consen   13 KKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSID   85 (264)
T ss_pred             ccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCC
Confidence            4599999999999999999999999999999999963   347899999999999999999999999976643

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=99.71  E-value=1e-17  Score=155.41  Aligned_cols=67  Identities=49%  Similarity=0.755  Sum_probs=64.1

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      .|||+||||+++++.+|||+|||+|+++||||+++++.++++|++|++||++|+||.+|+.||+++.
T Consensus         4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~   70 (306)
T PRK10266          4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQ   70 (306)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhc
Confidence            6999999999999999999999999999999999877899999999999999999999999999753

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.71  E-value=1.2e-17  Score=152.97  Aligned_cols=73  Identities=44%  Similarity=0.690  Sum_probs=67.8

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-chHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccCCCC
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDS  140 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~~~~  140 (282)
                      ..|||+||||+.+++.++||+|||+.++++|||||+ +|+|.++|+.|.+||+||+|+..|..||..+..+...
T Consensus         4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~   77 (296)
T KOG0691|consen    4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSA   77 (296)
T ss_pred             cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccc
Confidence            579999999999999999999999999999999998 5679999999999999999999999999988765443

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.69  E-value=2e-17  Score=156.31  Aligned_cols=68  Identities=43%  Similarity=0.636  Sum_probs=63.4

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCch--HHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--RAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~--~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      .+.||+||||.++|+..+||++||+||++|||||+++.  .+++.|+.|+.||+|||||..|+.||....
T Consensus         7 ~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hre   76 (508)
T KOG0717|consen    7 KRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHRE   76 (508)
T ss_pred             hhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHH
Confidence            47899999999999999999999999999999998864  588999999999999999999999998754

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.69  E-value=3.6e-17  Score=166.43  Aligned_cols=74  Identities=24%  Similarity=0.336  Sum_probs=68.2

Q ss_pred             hhCCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           64 AINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        64 ~~~~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      .+.+..+||+||||+++|+..+||+|||+||++|||||++++.+.++|+.|++||+||+||.+|+.||+++..+
T Consensus       568 ~~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~G  641 (1136)
T PTZ00341        568 IEIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDG  641 (1136)
T ss_pred             ccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccc
Confidence            34456899999999999999999999999999999999988778899999999999999999999999987654

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.68  E-value=6.6e-17  Score=114.10  Aligned_cols=58  Identities=52%  Similarity=0.772  Sum_probs=54.2

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC--chHHHHHHHHHHHHHHHhhhhhh
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK--DSRAVEVFKTIRCAYEVLSNEVT  126 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~--~~~a~~~f~~i~~Ay~vLsdp~~  126 (282)
                      .|||+||||+++++.++||++|+++++++|||+++  .+.+.+.|++|++||++|+||.+
T Consensus         1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~   60 (60)
T smart00271        1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK   60 (60)
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999999999998  56788999999999999999853

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.66  E-value=1.9e-16  Score=109.69  Aligned_cols=54  Identities=56%  Similarity=0.807  Sum_probs=51.6

Q ss_pred             CchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhh
Q 023421           70 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSN  123 (282)
Q Consensus        70 d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsd  123 (282)
                      |||+||||+++++.++||++||++++++|||+++. ..+.+.|++|++||++|+|
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence            69999999999999999999999999999999987 6788999999999999986

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.61  E-value=1.3e-15  Score=131.99  Aligned_cols=72  Identities=32%  Similarity=0.528  Sum_probs=64.5

Q ss_pred             hhCCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           64 AINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        64 ~~~~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ......|+||||||+++++..|||+|||+|+++|||||+++ ...++.|..|++||+.|+|+..|..|..++.
T Consensus        94 ~~~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~  166 (230)
T KOG0721|consen   94 RERQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGN  166 (230)
T ss_pred             HHhhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCC
Confidence            34456799999999999999999999999999999999987 4567788899999999999999999998643

>PHA03102 Small T antigen; Reviewed

Probab=99.60  E-value=1.3e-15  Score=127.27  Aligned_cols=65  Identities=23%  Similarity=0.366  Sum_probs=59.9

Q ss_pred             CCchhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           69 PDHYKVLGVAQSA--TLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        69 ~d~Y~iLgv~~~a--~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      ..+|+||||+++|  +.++||+|||++++++||||+++   +++|++|++||++|+|+.+|..||..+..
T Consensus         5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~---~e~~k~in~Ay~~L~d~~~r~~yd~~g~~   71 (153)
T PHA03102          5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD---EEKMKELNTLYKKFRESVKSLRDLDGEED   71 (153)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch---hHHHHHHHHHHHHHhhHHHhccccccCCc
Confidence            4689999999999  99999999999999999999764   47999999999999999999999987653

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=99.60  E-value=1.7e-15  Score=151.27  Aligned_cols=69  Identities=42%  Similarity=0.623  Sum_probs=65.1

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      .|||+||||+++|+.++||++||+|++++|||+++.+.+.++|++|++||++|+||.+|+.||+++..+
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG   70 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDG   70 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccc
Confidence            699999999999999999999999999999999988778899999999999999999999999987644

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.59  E-value=1.9e-15  Score=130.77  Aligned_cols=68  Identities=47%  Similarity=0.691  Sum_probs=63.6

Q ss_pred             CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchH--HHHHHHHHHHHHHHhhhhhhhHhhhhhh
Q 023421           67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR--AVEVFKTIRCAYEVLSNEVTRIKYDRAL  134 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~--a~~~f~~i~~Ay~vLsdp~~R~~YD~~~  134 (282)
                      ...+||+||||+++|+..|||++||++++++|||+++...  +.+.|+.|++||++|+|+.+|..||...
T Consensus         4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~   73 (237)
T COG2214           4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG   73 (237)
T ss_pred             hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence            4579999999999999999999999999999999998654  8899999999999999999999999853

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.54  E-value=7.5e-15  Score=139.06  Aligned_cols=76  Identities=36%  Similarity=0.491  Sum_probs=70.0

Q ss_pred             HhhhCCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           62 AAAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        62 ~~~~~~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      .....+.+|+|.+|||+.+++.++|||.||++|...|||||..+.|+|.|+.++.||++|+|+.+|..||..+...
T Consensus       228 l~re~~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~ke  303 (490)
T KOG0720|consen  228 LSRELNILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDLELKKE  303 (490)
T ss_pred             hhhhhcCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHHHHHHH
Confidence            3444458899999999999999999999999999999999999999999999999999999999999999987643

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.49  E-value=4.5e-14  Score=120.68  Aligned_cols=67  Identities=27%  Similarity=0.442  Sum_probs=58.7

Q ss_pred             CCchhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCchH------HHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           69 PDHYKVLGVAQS--ATLADIKRAYRLLARKYHPDVSKDSR------AVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        69 ~d~Y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~~~~~------a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      .|||+||||++.  ++..+||++||++++++|||+.....      +.+.|..||+||++|+||.+|+.|+-.+.
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l~   75 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLSLH   75 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHhc
Confidence            389999999996  68899999999999999999975421      45689999999999999999999997654

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.49  E-value=5.7e-14  Score=119.42  Aligned_cols=67  Identities=25%  Similarity=0.479  Sum_probs=58.6

Q ss_pred             CCchhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCchH----HHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           69 PDHYKVLGVAQS--ATLADIKRAYRLLARKYHPDVSKDSR----AVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        69 ~d~Y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~~~~~----a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      .|||+||||++.  ++..+|+++||++++++|||+.....    +.+.+..||+||+||+||.+|+.|+-.+.
T Consensus         2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l~   74 (166)
T PRK01356          2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLLQ   74 (166)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHcc
Confidence            589999999986  78999999999999999999986532    23457899999999999999999987664

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=99.49  E-value=4.3e-14  Score=130.49  Aligned_cols=72  Identities=40%  Similarity=0.606  Sum_probs=65.6

Q ss_pred             hhhCCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchH----HHHHHHHHHHHHHHhhhhhhhHhhhhhh
Q 023421           63 AAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR----AVEVFKTIRCAYEVLSNEVTRIKYDRAL  134 (282)
Q Consensus        63 ~~~~~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~----a~~~f~~i~~Ay~vLsdp~~R~~YD~~~  134 (282)
                      ......+|||+||||.++|+..||-+|||++|.++|||-..+..    ++++|..|..|-+||+||++|+.||..-
T Consensus       388 kkqs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnGe  463 (504)
T KOG0624|consen  388 KKQSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNGE  463 (504)
T ss_pred             HHHhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCCC
Confidence            34566799999999999999999999999999999999987653    7889999999999999999999999854

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.46  E-value=3e-14  Score=126.07  Aligned_cols=73  Identities=42%  Similarity=0.698  Sum_probs=68.1

Q ss_pred             hhCCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           64 AINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        64 ~~~~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      --....|.|+||||+++++..||++|||+|+++||||+++++.+.+.|+.|.+||++|.|.+.|..||-.+..
T Consensus        28 LYCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydyaldh  100 (329)
T KOG0722|consen   28 LYCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYALDH  100 (329)
T ss_pred             hcccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHHhcC
Confidence            3456789999999999999999999999999999999999999999999999999999999999999987764

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.44  E-value=1.9e-13  Score=116.81  Aligned_cols=69  Identities=33%  Similarity=0.514  Sum_probs=60.8

Q ss_pred             CCCCchhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCchH------HHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           67 GEPDHYKVLGVAQS--ATLADIKRAYRLLARKYHPDVSKDSR------AVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~~~~~------a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      +..|||++|||++.  .+..+|+++||++++++|||+.....      +.+.+..||+||+||+||.+|+.|+-.+.
T Consensus         2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l~   78 (173)
T PRK00294          2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLALS   78 (173)
T ss_pred             CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence            46799999999987  67899999999999999999976422      45679999999999999999999998664

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.44  E-value=2.4e-13  Score=116.63  Aligned_cols=68  Identities=25%  Similarity=0.431  Sum_probs=58.5

Q ss_pred             CCCchhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCc-hH-----HHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           68 EPDHYKVLGVAQS--ATLADIKRAYRLLARKYHPDVSKD-SR-----AVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        68 ~~d~Y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~~~-~~-----a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ..|||+||||++.  ++..+||++||++++++|||+... +.     +.+.+..||+||++|+||.+|+.|+-.+.
T Consensus         5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~   80 (176)
T PRK03578          5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLR   80 (176)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhc
Confidence            4799999999985  689999999999999999999764 22     33446899999999999999999997654

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.37  E-value=7.9e-13  Score=105.32  Aligned_cols=51  Identities=24%  Similarity=0.393  Sum_probs=47.0

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhh
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLS  122 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLs  122 (282)
                      .++|+||||+++++.+|||++||++++++|||+.++   .+.|++|++||++|.
T Consensus        65 ~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs---~~~~~kIneAyevL~  115 (116)
T PTZ00100         65 SEAYKILNISPTASKERIREAHKQLMLRNHPDNGGS---TYIASKVNEAKDLLL  115 (116)
T ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHHh
Confidence            699999999999999999999999999999999643   468899999999995

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=99.33  E-value=1.6e-12  Score=116.11  Aligned_cols=128  Identities=24%  Similarity=0.318  Sum_probs=90.3

Q ss_pred             hhhCCCCCchhhcCCCC---CCCHHHHHHHHHHHHHHhCCCCC---CchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           63 AAINGEPDHYKVLGVAQ---SATLADIKRAYRLLARKYHPDVS---KDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        63 ~~~~~~~d~Y~iLgv~~---~a~~~~Ik~ayr~l~~~~HPDk~---~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      ....+..|+|.+|||+.   .+++.+|.++.++.+.+||||+.   ++....+.|+.|+.||+||+|+.+|..||..-..
T Consensus        37 ~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df~  116 (379)
T COG5269          37 FKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDFD  116 (379)
T ss_pred             hhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccccc
Confidence            45566789999999994   57889999999999999999996   3345778999999999999999999999975432


Q ss_pred             CCCCCCcCCCCc----cCCccccccccccc----------hHHHHHHHHHHHHHhhhccccccccccc
Q 023421          137 RTDSDRSRRGNR----RYSSEFEDGVRIST----------WAELRRKLQYERHWKNYNSKEEYSSFYR  190 (282)
Q Consensus       137 ~~~~~~~~~~~~----~~~~~f~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (282)
                      .....+......    -+++.|+...++..          -+......+++.||.+|+.|+.|.+...
T Consensus       117 advppp~~~t~~~Ffe~w~pvFe~earFSkKqPvPsLg~~dss~keVe~FY~FW~nFdSWRtFE~lde  184 (379)
T COG5269         117 ADVPPPRIYTPDEFFEVWEPVFEREARFSKKQPVPSLGPSDSSLKEVEEFYEFWSNFDSWRTFEPLDE  184 (379)
T ss_pred             cCCCCccCCCchhHHHHHHHHHHhhhhccccCCCCCCCCchhHHHHHHHHHHHHHhccccccccchhh
Confidence            222211111111    12233332222211          1235667889999999999999876544

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.32  E-value=1.1e-12  Score=118.73  Aligned_cols=68  Identities=50%  Similarity=0.669  Sum_probs=63.2

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCch--HHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--RAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~--~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ..|+|+||+|.++|+.++||+|||++++++||||++.+  .++++|++|.+||++|+||.+|..||+++.
T Consensus         2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~   71 (306)
T KOG0714|consen    2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGE   71 (306)
T ss_pred             cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCc
Confidence            46999999999999999999999999999999998877  566689999999999999999999999876

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.32  E-value=2.3e-12  Score=117.52  Aligned_cols=57  Identities=42%  Similarity=0.578  Sum_probs=51.1

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc--------hHHHHHHHHHHHHHHHhhhh
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD--------SRAVEVFKTIRCAYEVLSNE  124 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~--------~~a~~~f~~i~~Ay~vLsdp  124 (282)
                      ..++|+||||++++|.+|||++||+|+++||||+...        +.++++|++|++||++|+..
T Consensus       199 ~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~  263 (267)
T PRK09430        199 LEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ  263 (267)
T ss_pred             HHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence            3799999999999999999999999999999999642        24789999999999999853

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.31  E-value=1.4e-12  Score=122.74  Aligned_cols=74  Identities=35%  Similarity=0.579  Sum_probs=66.7

Q ss_pred             hhhCCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCch--HHHHHHHHHHHHHHHhhhhhhhHhhhhhhcc
Q 023421           63 AAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--RAVEVFKTIRCAYEVLSNEVTRIKYDRALKF  136 (282)
Q Consensus        63 ~~~~~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~--~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~  136 (282)
                      -.+++..|||.|||+.++++..|||++||++++.+|||++...  +++.+|+++-+||.||+||.+|..||.....
T Consensus       367 LkkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~dl  442 (486)
T KOG0550|consen  367 LKKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQDL  442 (486)
T ss_pred             HHHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccccch
Confidence            3455678999999999999999999999999999999998765  5888999999999999999999999986543

>PHA02624 large T antigen; Provisional

Probab=99.30  E-value=6.1e-12  Score=124.63  Aligned_cols=61  Identities=26%  Similarity=0.466  Sum_probs=56.8

Q ss_pred             CCCchhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhh
Q 023421           68 EPDHYKVLGVAQSA--TLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYD  131 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a--~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD  131 (282)
                      ..++|+||||+++|  +.++||+|||+++++|||||.++   +++|++|++||++|+|+.+|..|+
T Consensus        10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd---eekfk~Ln~AYevL~d~~k~~r~~   72 (647)
T PHA02624         10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD---EEKMKRLNSLYKKLQEGVKSARQS   72 (647)
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc---HHHHHHHHHHHHHHhcHHHhhhcc
Confidence            36899999999999  99999999999999999999754   579999999999999999999994

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=99.16  E-value=3.1e-11  Score=114.41  Aligned_cols=72  Identities=35%  Similarity=0.525  Sum_probs=64.3

Q ss_pred             hhCCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc------hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           64 AINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD------SRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        64 ~~~~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~------~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ......|+|||||++.+++..+||++||+|+.|+||||.++      ..-++.+++|++||+.|+|...|..|-.++.
T Consensus        93 ~~~~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGt  170 (610)
T COG5407          93 EYRRGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGT  170 (610)
T ss_pred             HHHcCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCC
Confidence            44456899999999999999999999999999999999875      2367889999999999999999999987654

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=99.12  E-value=1.3e-10  Score=99.52  Aligned_cols=67  Identities=19%  Similarity=0.273  Sum_probs=58.4

Q ss_pred             CCchhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCchH------HHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           69 PDHYKVLGVAQS--ATLADIKRAYRLLARKYHPDVSKDSR------AVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        69 ~d~Y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~~~~~------a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      .|||++||+++.  .+..+++++||++.+++|||+.....      +.+.-..||+||.+|+||.+|+.|=-.+.
T Consensus         2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~   76 (173)
T PRK01773          2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALN   76 (173)
T ss_pred             CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhc
Confidence            589999999986  89999999999999999999975432      44567889999999999999999987655

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=99.02  E-value=4.8e-10  Score=94.60  Aligned_cols=55  Identities=29%  Similarity=0.442  Sum_probs=48.2

Q ss_pred             CCHHHHHHHHHHHHHHhCCCCCCch------HHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           81 ATLADIKRAYRLLARKYHPDVSKDS------RAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        81 a~~~~Ik~ayr~l~~~~HPDk~~~~------~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      .+..+|+++||++++++|||+....      .+.+.+..||+||++|+||.+|+.|+-.+.
T Consensus         3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~   63 (157)
T TIGR00714         3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH   63 (157)
T ss_pred             CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence            4778999999999999999986532      156789999999999999999999998765

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.00  E-value=5.5e-10  Score=95.97  Aligned_cols=64  Identities=33%  Similarity=0.516  Sum_probs=58.5

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCch--HHHHHHHHHHHHHHHhhhhhhhHhhh
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--RAVEVFKTIRCAYEVLSNEVTRIKYD  131 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~--~a~~~f~~i~~Ay~vLsdp~~R~~YD  131 (282)
                      +-|+|+||.|.|..+.++||+.||+|++..|||||+++  .|...|..+.+||..|-|+..|..-+
T Consensus        52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~  117 (250)
T KOG1150|consen   52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCL  117 (250)
T ss_pred             ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            46999999999999999999999999999999999975  48889999999999999999776644

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=98.40  E-value=3.9e-07  Score=94.12  Aligned_cols=54  Identities=37%  Similarity=0.552  Sum_probs=46.7

Q ss_pred             CCCchhhcCCCCC----CCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhh
Q 023421           68 EPDHYKVLGVAQS----ATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSN  123 (282)
Q Consensus        68 ~~d~Y~iLgv~~~----a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd  123 (282)
                      ..+.|+||.|+-+    -..+.||++|+|||.+||||||+.  ..++|..+|+|||.|+.
T Consensus      1280 ~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE--GRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1280 VDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE--GREMFERVNKAYELLSS 1337 (2235)
T ss_pred             hHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch--HHHHHHHHHHHHHHHHH
Confidence            4578999999843    345889999999999999999886  56899999999999983

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.40  E-value=4.8e-07  Score=79.72  Aligned_cols=56  Identities=27%  Similarity=0.539  Sum_probs=52.1

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHH-Hhhhh
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYE-VLSNE  124 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~-vLsdp  124 (282)
                      ..+|.||||..+++..++|.+|.+|++++|||...+....++|.+|.+||. ||+.-
T Consensus        47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq~~  103 (342)
T KOG0568|consen   47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQEK  103 (342)
T ss_pred             HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999888878899999999999 88754

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.32  E-value=1.1e-06  Score=68.46  Aligned_cols=52  Identities=27%  Similarity=0.301  Sum_probs=45.2

Q ss_pred             CchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhh
Q 023421           70 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNE  124 (282)
Q Consensus        70 d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp  124 (282)
                      ..-.||||+++++.+.||.++||+...+|||+.+.|   -.-.+||||+++|...
T Consensus        57 EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP---YlAsKINEAKdlLe~~  108 (112)
T KOG0723|consen   57 EAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP---YLASKINEAKDLLEGT  108 (112)
T ss_pred             HHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH---HHHHHHHHHHHHHhcc
Confidence            344699999999999999999999999999999987   3346799999999753

>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=97.68  E-value=6.3e-05  Score=62.64  Aligned_cols=70  Identities=23%  Similarity=0.398  Sum_probs=57.0

Q ss_pred             CCCCCchhhcCCC--CCCCHHHHHHHHHHHHHHhCCCCCCc------hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           66 NGEPDHYKVLGVA--QSATLADIKRAYRLLARKYHPDVSKD------SRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        66 ~~~~d~Y~iLgv~--~~a~~~~Ik~ayr~l~~~~HPDk~~~------~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ....+||.++|..  ....+..++.-|....++.|||+...      ..+.+...++|+||.+|.||-+|+.|=..+.
T Consensus         5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilkl~   82 (168)
T KOG3192|consen    5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLKLK   82 (168)
T ss_pred             chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence            4457999999865  44566677778999999999999543      2477889999999999999999999986654

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.85  E-value=0.00099  Score=57.07  Aligned_cols=58  Identities=36%  Similarity=0.468  Sum_probs=48.3

Q ss_pred             hhCCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc--------hHHHHHHHHHHHHHHHh
Q 023421           64 AINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD--------SRAVEVFKTIRCAYEVL  121 (282)
Q Consensus        64 ~~~~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~--------~~a~~~f~~i~~Ay~vL  121 (282)
                      ......+.|.+|++...++..+||++|+++...+|||+...        ..+.+++++|++||+-+
T Consensus       108 ~~~~~~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         108 EQLDREDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             HcccchhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            33344799999999999999999999999999999998532        23678899999999753

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=96.62  E-value=0.002  Score=63.20  Aligned_cols=40  Identities=33%  Similarity=0.440  Sum_probs=31.7

Q ss_pred             CCHHHHHHHHHHHHHHhCCCCCCchH--------HHHHHHHHHHHHHH
Q 023421           81 ATLADIKRAYRLLARKYHPDVSKDSR--------AVEVFKTIRCAYEV  120 (282)
Q Consensus        81 a~~~~Ik~ayr~l~~~~HPDk~~~~~--------a~~~f~~i~~Ay~v  120 (282)
                      .+.++||++|||..+..||||.+...        +++.|..+++|++.
T Consensus       400 Vtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~  447 (453)
T KOG0431|consen  400 VTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNK  447 (453)
T ss_pred             cCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence            68899999999999999999976532        55666667776654

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.23  E-value=0.0042  Score=53.18  Aligned_cols=64  Identities=30%  Similarity=0.495  Sum_probs=49.3

Q ss_pred             hhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCchH------HHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           72 YKVLGVAQSA--TLADIKRAYRLLARKYHPDVSKDSR------AVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        72 Y~iLgv~~~a--~~~~Ik~ayr~l~~~~HPDk~~~~~------a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ...+|..+..  ..+.++..|+.+.+.+|||+.....      +.+.+..++.||.+|.||-+|..|=..+.
T Consensus         4 ~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~   75 (174)
T COG1076           4 FVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALA   75 (174)
T ss_pred             ccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhc
Confidence            3344444332  3456899999999999999987543      34578899999999999999999987665

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=95.85  E-value=0.027  Score=45.86  Aligned_cols=55  Identities=18%  Similarity=0.271  Sum_probs=40.6

Q ss_pred             CchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhh
Q 023421           70 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTR  127 (282)
Q Consensus        70 d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R  127 (282)
                      .-..||||++..+.++|.+.|.+|-..++|++.+..   -.-.+|..|.+.|..+-+.
T Consensus        59 EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGSf---YLQSKV~rAKErl~~El~~  113 (127)
T PF03656_consen   59 EARQILNVKEELSREEIQKRYKHLFKANDPSKGGSF---YLQSKVFRAKERLEQELKE  113 (127)
T ss_dssp             HHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-H---HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCCH---HHHHHHHHHHHHHHHHHHH
Confidence            567899999999999999999999999999987754   4446688899988765533

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]

Probab=88.37  E-value=0.51  Score=44.26  Aligned_cols=54  Identities=30%  Similarity=0.350  Sum_probs=44.5

Q ss_pred             CCHHHHHHHHHHHHHHhCCCCCC-----chHHHHHHHHHHHHHHHhhhhhhhHhhhhhh
Q 023421           81 ATLADIKRAYRLLARKYHPDVSK-----DSRAVEVFKTIRCAYEVLSNEVTRIKYDRAL  134 (282)
Q Consensus        81 a~~~~Ik~ayr~l~~~~HPDk~~-----~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~  134 (282)
                      ++..+|+.+|+..++.+|||+..     ....++.|+.|.+||+||++..+|...|+..
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~~   62 (335)
T KOG0724|consen    4 ASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSWD   62 (335)
T ss_pred             ccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhhh
Confidence            56788999999999999999874     2235678999999999999977767777655

>PF13446 RPT: A repeated domain in UCH-protein

Probab=84.89  E-value=2.3  Score=29.71  Aligned_cols=45  Identities=22%  Similarity=0.349  Sum_probs=33.2

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhh
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSN  123 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd  123 (282)
                      .+.|++|||+++.+.+.|-.+|+.... ..|         .....+.+|..++.+
T Consensus         5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~-~~P---------~~~~~~r~AL~~Ia~   49 (62)
T PF13446_consen    5 EEAYEILGIDEDTDDDFIISAFQSKVN-DDP---------SQKDTLREALRVIAE   49 (62)
T ss_pred             HHHHHHhCcCCCCCHHHHHHHHHHHHH-cCh---------HhHHHHHHHHHHHHH
Confidence            467999999999999999999999877 222         233445666666654

>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised

Probab=83.46  E-value=3.1  Score=36.36  Aligned_cols=40  Identities=25%  Similarity=0.386  Sum_probs=31.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhh
Q 023421           78 AQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNE  124 (282)
Q Consensus        78 ~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp  124 (282)
                      +++|+.+||++|+.++..+|--|       ++.-.+|-.||+.+.=.
T Consensus         1 S~~ASfeEIq~Arn~ll~~y~gd-------~~~~~~IEaAYD~ILM~   40 (194)
T PF11833_consen    1 SEDASFEEIQAARNRLLAQYAGD-------EKSREAIEAAYDAILME   40 (194)
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCC-------HHHHHHHHHHHHHHHHH
Confidence            47899999999999999999443       24557799999965433

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	282
2cug_A	88	Solution Structure Of The J Domain Of The Pseudo Dn		6e-13
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		2e-12
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		2e-12
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		1e-11
2kqx_A	73	Nmr Structure Of The J-Domain (Residues 2-72) In Th		1e-11
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		3e-10
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		1e-09
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		2e-09
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		3e-09
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		3e-08
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		3e-08
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		5e-08
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		5e-08
2ctr_A	88	Solution Structure Of J-Domain From Human Dnaj Subf		7e-08
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		1e-07
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		2e-07
2o37_A	92	J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S		6e-06
2yua_A	99	Solution Structure Of The Dnaj Domain From Human Wi		9e-06
1wjz_A	94	Soluiotn Structure Of J-Domain Of Mouse Dnaj Like P		2e-05
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		2e-05
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		2e-05
2ctq_A	112	Solution Structure Of J-Domain From Human Dnaj Subf		2e-05
2l6l_A	155	Solution Structure Of Human J-Protein Co-Chaperone,		1e-04
2y4t_A	450	Crystal Structure Of The Human Co-Chaperone P58(Ipk		1e-04
2y4u_A	450	Crystal Structure Of Human P58(Ipk) In Space Group		2e-04

>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 46/62 (74%)
Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D Y+VLGV+++A+ ADIK+AY+ LAR++HPD +KD  A + F  I  AYE+LSNE  R  
Sbjct: 18  DPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTN 77
Query: 130 YD 131
           YD
Sbjct: 78  YD 79

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y +LGV  +  L  IK AYR LARKYHPDVSK++ A   FK +  A+EVL +E  R +
Sbjct: 29  DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAE 88
Query: 130 YDRALKFRTDSDRSRR 145
           YD+  + R D    R+
Sbjct: 89  YDQLWQHRNDPGFGRQ 104

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS-RAVEVFKTIRCAYEVLSNEVTRI 128
           D+Y++LGV ++A+  +IK+AY  LA+KYHPD +KD  +A E F  +  AYEVLS+EV R 
Sbjct: 8   DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRK 67
Query: 129 KYD 131
           +YD
Sbjct: 68  QYD 70

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y++LGV++ A+  D+K+AYR LA K+HPD +    A E FK I  AY VLSN   R +
Sbjct: 8   DYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQ 67
Query: 130 YDR 132
           YD+
Sbjct: 68  YDQ 70

>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y ++GV  +  L  IK AYR LARKYHPDVSK+  A   FK +  A+EVLS+E  R +
Sbjct: 6   DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAE 65
Query: 130 YDRALKFR 137
           YD+  + R
Sbjct: 66  YDQMWQHR 73

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 66  NGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR--AVEVFKTIRCAYEVLSN 123
           +G  ++Y+VLGV  SA+  DIK+AYR LA ++HPD + D++  A + FK +  AYEVLS+
Sbjct: 6   SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSD 65
Query: 124 EVTRIKYDRA 133
              R  YDRA
Sbjct: 66  SKKRSLYDRA 75

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y+ LG+A+ A+  +IKRAYR  A +YHPD +K+  A E FK I  AY+VLS+   R  
Sbjct: 4   DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREI 63
Query: 130 YDR 132
           +DR
Sbjct: 64  FDR 66

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEV-FKTIRCAYEVLSNEVTRI 128
           D+Y++LGV+++A   +I++AY+ LA KYHPD ++  +  E  FK I+ AYEVL++   R 
Sbjct: 4   DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63
Query: 129 KYDR 132
            YD+
Sbjct: 64  AYDQ 67

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEV-FKTIRCAYEVLSNEVTRI 128
           D+Y++LGV+++A   +I++AY+ LA KYHPD ++  +  E  FK I+ AYEVL++   R 
Sbjct: 4   DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63
Query: 129 KYDR 132
            YD+
Sbjct: 64  AYDQ 67

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 72  YKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS-RAVEVFKTIRCAYEVLSNEVTRIKY 130
           Y VLG+ ++AT  DIK++YR LA KYHPD + D+  A + FK I  A+ +L++   R  Y
Sbjct: 20  YHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIY 79
Query: 131 DR 132
           D+
Sbjct: 80  DK 81

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 68  EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTR 127
           E  +Y VLGV  +AT  ++K+AYR LA KYHPD  K+    E FK I  AYEVLS+   R
Sbjct: 5   ETTYYDVLGVKPNATQEELKKAYRKLALKYHPD--KNPNEGEKFKQISQAYEVLSDAKKR 62
Query: 128 IKYDRA 133
             YD+ 
Sbjct: 63  ELYDKG 68

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEV-FKTIRCAYEVLSNEVTRI 128
           D+Y++LGV+++A   +I++AY+ LA KYHPD ++  +  E  FK I+ AYEVL++   R 
Sbjct: 4   DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63
Query: 129 KYDR 132
            YD+
Sbjct: 64  AYDQ 67

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 68  EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTR 127
           E  +Y VLGV   A+  ++K+AYR +A K+HPD  K+    E FK I  AYEVLS+E  R
Sbjct: 7   ETGYYDVLGVKPDASDNELKKAYRKMALKFHPD--KNPDGAEQFKQISQAYEVLSDEKKR 64
Query: 128 IKYDRA 133
             YD+ 
Sbjct: 65  QIYDQG 70

>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 71  HYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKY 130
           +Y +LGV +SA+   IK+A+  LA KYHPD +K   A   F+ I  AYE LS+   R +Y
Sbjct: 9   YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEY 68
Query: 131 D 131
           D
Sbjct: 69  D 69

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 71  HYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR--AVEVFKTIRCAYEVLSNEVTRI 128
           +Y++L V +SA+  DIK+AYR  A ++HPD + D++  A + FK +  AYEVLS++  R 
Sbjct: 4   YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKRE 63
Query: 129 KYDR 132
            YDR
Sbjct: 64  IYDR 67

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 66  NGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR--AVEVFKTIRCAYEVLSN 123
           +G  D+Y+VL V + A+   IK+AYR LA K+HPD + +++  A   FK +  AYEVLS+
Sbjct: 6   SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSD 65
Query: 124 EVTRIKYDR 132
              R  YDR
Sbjct: 66  AKKRDIYDR 74

>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 72  YKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYD 131
           Y +LGV+ SA   ++K+ YR  A KYHPD  K +   E FK I  A+E+L++   R  YD
Sbjct: 11  YDLLGVSPSANEQELKKGYRKAALKYHPD--KPTGDTEKFKEISEAFEILNDPQKREIYD 68
Query: 132 R 132
           +
Sbjct: 69  Q 69

>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 72  YKVLGVAQSATLADIKRAYRLLARKYHPD-VSKDSRAVEVFKTIRCAYEVLSNEVTRIKY 130
           Y +LGV  +AT A IK AY      YHPD  S  + A E F  I  AY VL +   R KY
Sbjct: 20  YDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKY 79
Query: 131 DRAL 134
           DR L
Sbjct: 80  DRGL 83

>pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like Protein Length = 94

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPD-VSKDSRA------VEVFKTIRCAYEVLS 122
           D Y +LG   SA ++D+K+ Y+ L   YHPD  S D  A      ++ F  I  A+++L 
Sbjct: 17  DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILG 76
Query: 123 NEVTRIKYD 131
           NE T+ KYD
Sbjct: 77  NEETKKKYD 85

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 65  INGEPDH--YKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS-RAVEVFKTIRCAYEVL 121
           I G  D   Y +LGV+++A+  +I++A++ LA K HPD + ++  A   F  I  AYEVL
Sbjct: 15  IEGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVL 74
Query: 122 SNEVTRIKYDR 132
            +E  R KYD+
Sbjct: 75  KDEDLRKKYDK 85

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS-RAVEVFKTIRCAYEVLSNEVTRI 128
           + Y +LGV+++A+  +I++A++ LA K HPD + ++  A   F  I  AYEVL +E  R 
Sbjct: 3   NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 62
Query: 129 KYDR 132
           KYD+
Sbjct: 63  KYDK 66

>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily C Menber 12 Length = 112

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDV-SKDSRAVEVFKTIRCAYEVLSNEVTRI 128
           D+Y +LG  + +++  I   +++ A + HPD   ++ +AVE F+ ++ A E+L+NE +R 
Sbjct: 21  DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA 80
Query: 129 KYD 131
           +YD
Sbjct: 81  RYD 83

>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPD-VSKD------SRAVEVFKTIRCAYEVLS 122
           D Y +LG   SA ++D+K+ Y+ L   YHPD  S D         V+ F  I  A+++L 
Sbjct: 11  DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70
Query: 123 NEVTRIKYD 131
           NE T+ +YD
Sbjct: 71  NEETKREYD 79

>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD----SRAVEVFKTIRCAYEVLSNEV 125
           D+YK+LGV ++A   +I +AYR LA ++HPD  ++     +A + F  I  A EVLS+  
Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 442
Query: 126 TRIKYD 131
            R K+D
Sbjct: 443 MRKKFD 448

>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD----SRAVEVFKTIRCAYEVLSNEV 125
           D+YK+LGV ++A   +I +AYR LA ++HPD  ++     +A + F  I  A EVLS+  
Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 442
Query: 126 TRIKYD 131
            R K+D
Sbjct: 443 XRKKFD 448

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	282
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	2e-27
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	5e-26
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	3e-25
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	5e-25
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	9e-24
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	1e-23
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	1e-22
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	1e-22
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	2e-22
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	7e-22
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	1e-21
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	1e-21
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	1e-21
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	2e-21
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	2e-21
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	2e-21
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	3e-21
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	6e-21
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	6e-21
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	1e-20
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	1e-20
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	2e-20
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	5e-19
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	6e-19
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	9e-14
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	2e-13
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	4e-13
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	1e-12
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	3e-12
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	1e-09
2guz_A	71	Mitochondrial import inner membrane translocase su	3e-08
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	4e-08
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	7e-07
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	3e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score =  107 bits (269), Expect = 2e-27
 Identities = 37/88 (42%), Positives = 50/88 (56%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y +LGV  +  L  IK AYR LARKYHPDVSK++ A   FK +  A+EVL +E  R +
Sbjct: 29  DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAE 88

Query: 130 YDRALKFRTDSDRSRRGNRRYSSEFEDG 157
           YD+  + R D    R+      S  +  
Sbjct: 89  YDQLWQHRNDPGFGRQRQTHEQSYSQQD 116

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score = 97.1 bits (242), Expect = 5e-26
 Identities = 38/79 (48%), Positives = 52/79 (65%)

Query: 54  SSWSSSAAAAAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKT 113
           SS SS    +    + D Y+VLGV+++A+ ADIK+AY+ LAR++HPD +KD  A + F  
Sbjct: 2   SSGSSGILQSLSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQ 61

Query: 114 IRCAYEVLSNEVTRIKYDR 132
           I  AYE+LSNE  R  YD 
Sbjct: 62  ISKAYEILSNEEKRTNYDH 80

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score = 94.9 bits (237), Expect = 3e-25
 Identities = 31/63 (49%), Positives = 43/63 (68%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y+ LG+A+ A+  +IKRAYR  A +YHPD +K+  A E FK I  AY+VLS+   R  
Sbjct: 4   DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREI 63

Query: 130 YDR 132
           +DR
Sbjct: 64  FDR 66

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 94.2 bits (235), Expect = 5e-25
 Identities = 31/63 (49%), Positives = 43/63 (68%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y++LGV++ A+  D+K+AYR LA K+HPD +    A E FK I  AY VLSN   R +
Sbjct: 8   DYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQ 67

Query: 130 YDR 132
           YD+
Sbjct: 68  YDQ 70

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 91.2 bits (227), Expect = 9e-24
 Identities = 28/63 (44%), Positives = 38/63 (60%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
            +Y +LGV +SA+   IK+A+  LA KYHPD +K   A   F+ I  AYE LS+   R +
Sbjct: 8   SYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKE 67

Query: 130 YDR 132
           YD 
Sbjct: 68  YDT 70

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score = 93.0 bits (231), Expect = 1e-23
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 10/94 (10%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-------SRAVEVFKTIRCAYEVLS 122
           D Y +LG   SA ++D+K+ Y+ L   YHPD              V+ F  I  A+++L 
Sbjct: 11  DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70

Query: 123 NEVTRIKYDRALKFRTDSDRSRRGNRRYSSEFED 156
           NE T+ +YD     R + D    G        E+
Sbjct: 71  NEETKREYDL---QRCEDDLRNVGPVDAQVYLEE 101

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 88.2 bits (219), Expect = 1e-22
 Identities = 18/67 (26%), Positives = 28/67 (41%)

Query: 65  INGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNE 124
           I    D + +LGV   A+  ++ +AYR LA   HPD      + + FK +  A   L   
Sbjct: 23  IRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKN 82

Query: 125 VTRIKYD 131
           +      
Sbjct: 83  IKSGPSS 89

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score = 89.0 bits (221), Expect = 1e-22
 Identities = 21/64 (32%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRI 128
           D+Y +LG  + +++  I   +++ A + HPD    + +AVE F+ ++ A E+L+NE +R 
Sbjct: 21  DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA 80

Query: 129 KYDR 132
           +YD 
Sbjct: 81  RYDH 84

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 87.7 bits (218), Expect = 2e-22
 Identities = 33/64 (51%), Positives = 47/64 (73%), Gaps = 1/64 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRI 128
           D+Y++LGV ++A+  +IK+AY  LA+KYHPD +K D +A E F  +  AYEVLS+EV R 
Sbjct: 8   DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRK 67

Query: 129 KYDR 132
           +YD 
Sbjct: 68  QYDA 71

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score = 86.7 bits (215), Expect = 7e-22
 Identities = 30/77 (38%), Positives = 36/77 (46%), Gaps = 1/77 (1%)

Query: 57  SSSAAAAAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIR 115
           SS +           Y +LGV  +AT A IK AY      YHPD +   + A E F  I 
Sbjct: 5   SSGSQGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRIS 64

Query: 116 CAYEVLSNEVTRIKYDR 132
            AY VL +   R KYDR
Sbjct: 65  QAYVVLGSATLRRKYDR 81

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score = 85.9 bits (213), Expect = 1e-21
 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 7/70 (10%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR-------AVEVFKTIRCAYEVLS 122
           D Y +LG   SA ++D+K+ Y+ L   YHPD              ++ F  I  A+++L 
Sbjct: 17  DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILG 76

Query: 123 NEVTRIKYDR 132
           NE T+ KYD 
Sbjct: 77  NEETKKKYDL 86

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score = 89.2 bits (221), Expect = 1e-21
 Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRI 128
           + Y +LGV+++A+  +I++A++ LA K HPD +  +  A   F  I  AYEVL +E  R 
Sbjct: 3   NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 62

Query: 129 KYDR 132
           KYD+
Sbjct: 63  KYDK 66

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score = 85.0 bits (211), Expect = 1e-21
 Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 2/65 (3%)

Query: 68  EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTR 127
           E  +Y VLGV   A+  ++K+AYR +A K+HPD + D    E FK I  AYEVLS+E  R
Sbjct: 7   ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD--GAEQFKQISQAYEVLSDEKKR 64

Query: 128 IKYDR 132
             YD+
Sbjct: 65  QIYDQ 69

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score = 85.9 bits (213), Expect = 2e-21
 Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR-AVEVFKTIRCAYEVLSNEVTRI 128
             Y VLG+ ++AT  DIK++YR LA KYHPD + D+  A + FK I  A+ +L++   R 
Sbjct: 18  SLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRN 77

Query: 129 KYDR 132
            YD+
Sbjct: 78  IYDK 81

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score = 85.5 bits (212), Expect = 2e-21
 Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 2/65 (3%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR--AVEVFKTIRCAYEVLSNEVTR 127
            +Y++L V +SA+  DIK+AYR  A ++HPD + D++  A + FK +  AYEVLS++  R
Sbjct: 3   SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKR 62

Query: 128 IKYDR 132
             YDR
Sbjct: 63  EIYDR 67

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score = 85.4 bits (212), Expect = 2e-21
 Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 1/64 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRI 128
           D+Y++LGV+++A   +I++AY+ LA KYHPD ++ D  A   FK I+ AYEVL++   R 
Sbjct: 4   DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63

Query: 129 KYDR 132
            YD+
Sbjct: 64  AYDQ 67

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score = 84.6 bits (210), Expect = 3e-21
 Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 2/65 (3%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR--AVEVFKTIRCAYEVLSNEVTR 127
           D+Y+VL V + A+   IK+AYR LA K+HPD + +++  A   FK +  AYEVLS+   R
Sbjct: 10  DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKR 69

Query: 128 IKYDR 132
             YDR
Sbjct: 70  DIYDR 74

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score = 83.9 bits (208), Expect = 6e-21
 Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 2/65 (3%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR--AVEVFKTIRCAYEVLSNEVTR 127
           ++Y+VLGV  SA+  DIK+AYR LA ++HPD + D++  A + FK +  AYEVLS+   R
Sbjct: 10  NYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKR 69

Query: 128 IKYDR 132
             YDR
Sbjct: 70  SLYDR 74

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score = 84.4 bits (209), Expect = 6e-21
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 67  GEPDHYKVLGVAQSA-TLADIKRAYRLLARKYHPDVSKD----SRAVEVFKTIRCAYEVL 121
           G  + Y VL V +       + +AYR LARK+HPD  K+      A E F+ I  AYE L
Sbjct: 13  GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETL 72

Query: 122 SNEVTRIKYDR 132
            ++  +  YD 
Sbjct: 73  KDDEAKTNYDY 83

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score = 83.1 bits (206), Expect = 1e-20
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 68  EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTR 127
           E   Y +LGV+ SA   ++K+ YR  A KYHPD        E FK I  A+E+L++   R
Sbjct: 7   ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTG--DTEKFKEISEAFEILNDPQKR 64

Query: 128 IKYDR 132
             YD+
Sbjct: 65  EIYDQ 69

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score = 83.7 bits (207), Expect = 1e-20
 Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 5/89 (5%)

Query: 70  DHYKVLGVAQSA--TLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTR 127
               +LG+ +SA   +  +++AY    +++HPD   D    E  K +   Y+ + + V  
Sbjct: 9   QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKMEDGVKY 65

Query: 128 IKYDRALKFRTDSDRSRRGNRRYSSEFED 156
                   F   ++    G   +   +  
Sbjct: 66  AHQPDFGGFWDATEIPTYGTDEWEQWWNA 94

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score = 85.0 bits (210), Expect = 2e-20
 Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 8/89 (8%)

Query: 70  DHYKVLGVAQSA--TLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTR 127
               +LG+ +SA   +  +++AY    +++HPD   D    E  K +   Y+ + + V  
Sbjct: 12  QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKMEDGVKY 68

Query: 128 IKYDRALKFRTDSDRSRRGNRRYSSEFED 156
                   F    D +       +   + 
Sbjct: 69  AHQPD---FGGFWDATEVFASSLNPGVDA 94

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score = 86.0 bits (212), Expect = 5e-19
 Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 1/113 (0%)

Query: 52  ASSSWSSSAAAAAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVS-KDSRAVEV 110
           +      S+       + + Y +LGV+++A+  +I++A++ LA K HPD +  +  A   
Sbjct: 4   SHHHHHHSSGHIEGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGD 63

Query: 111 FKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRGNRRYSSEFEDGVRISTW 163
           F  I  AYEVL +E  R KYD+  +   + ++  +        ++ G+     
Sbjct: 64  FLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDP 116

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score = 78.6 bits (194), Expect = 6e-19
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 5/65 (7%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR--AVEVFKTIRCAYEVLSNEVTR 127
           +   V+  A     ++ K+  R L  K+HPD + ++   A EVFK ++     L     +
Sbjct: 17  EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK---Q 73

Query: 128 IKYDR 132
              D+
Sbjct: 74  AFLDQ 78

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 66.1 bits (161), Expect = 2e-13
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 8/74 (10%)

Query: 70  DHYKVLGVAQSATL--ADIKRAYRLLARKYHPDVSKDS------RAVEVFKTIRCAYEVL 121
           D++ + G+     L    +   ++ L R+YHPD            AV+   TI  A++ L
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 122 SNEVTRIKYDRALK 135
            + + R +Y  +L 
Sbjct: 62  RHPLMRAEYLLSLH 75

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score = 68.2 bits (167), Expect = 4e-13
 Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 4/67 (5%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD----SRAVEVFKTIRCAYEVLSNEV 125
           D+YK+LGV ++A   +I +AYR LA ++HPD  ++     +A + F  I  A EVLS+  
Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 442

Query: 126 TRIKYDR 132
            R K+D 
Sbjct: 443 MRKKFDD 449

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 61.5 bits (149), Expect = 1e-12
 Identities = 8/64 (12%), Positives = 24/64 (37%), Gaps = 5/64 (7%)

Query: 70  DHYKVLGVAQSA--TLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTR 127
              ++L + +        +++AY+  +   HPD         + + +   +     EV  
Sbjct: 12  RLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSH---ALMQELNSLWGTFKTEVYN 68

Query: 128 IKYD 131
           ++ +
Sbjct: 69  LRMN 72

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 62.7 bits (152), Expect = 3e-12
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 11/95 (11%)

Query: 69  PDHYKVLGVAQSATL-------ADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVL 121
              Y++        L       + +++ YR L  ++HPD     +  E   T+  AY  L
Sbjct: 11  STFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPD--MAQQGSEQSSTLNQAYHTL 68

Query: 122 SNEVTRIKYDRALKFRTD--SDRSRRGNRRYSSEF 154
            + + R +Y   L    D   +++         + 
Sbjct: 69  KDPLRRSQYMLKLLRNIDLTQEQTSNEVTTSDPQL 103

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 55.6 bits (133), Expect = 1e-09
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 72  YKVLGVAQSATLADIKRAYRLLARKYHPD----VSKDSRAVEVFKTIRCAYEVLSNEVTR 127
           +K +G+A   T   +K+ YR      HPD       +  A  +F  +  A+    N+  +
Sbjct: 120 WKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQK 179

Query: 128 IKY 130
             Y
Sbjct: 180 PLY 182

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 48.9 bits (117), Expect = 3e-08
 Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 4/57 (7%)

Query: 72  YKVLGVAQSA-TLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTR 127
            ++L + ++  T   +K  +R +    HPD         +   I  A + L      
Sbjct: 17  LQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSP---FLATKINEAKDFLEKRGIS 70

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 51.7 bits (123), Expect = 4e-08
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 8/70 (11%)

Query: 70  DHYKVLGVAQSATL--ADIKRAYRLLARKYHPDVSKDS------RAVEVFKTIRCAYEVL 121
           D++ ++   +S  +  A ++  Y+ L R  HPD            + +    +  AY+ L
Sbjct: 44  DYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTL 103

Query: 122 SNEVTRIKYD 131
              ++R  Y 
Sbjct: 104 LAPLSRGLYL 113

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 45.8 bits (108), Expect = 7e-07
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 4/57 (7%)

Query: 72  YKVLGVAQSATLADIKRAYRLLARKYHPD----VSKDSRAVEVFKTIRCAYEVLSNE 124
           +K +G+A   T   +K+ YR      HP        +  A  +F  +  A+    N+
Sbjct: 36  WKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFENQ 92

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 44.2 bits (104), Expect = 3e-06
 Identities = 9/63 (14%), Positives = 26/63 (41%), Gaps = 8/63 (12%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPD--------VSKDSRAVEVFKTIRCAYEVL 121
             +K + +        ++++Y+      HPD         ++   A +VF+ ++ A++  
Sbjct: 41  SGWKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHF 100

Query: 122 SNE 124
           +  
Sbjct: 101 NTL 103

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 5e-05
 Identities = 38/242 (15%), Positives = 67/242 (27%), Gaps = 102/242 (42%)

Query: 66  NGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDV--SKDSRAVEVF--KTIRCAYEVL 121
             E DH  ++          +    RL           SK    V+ F  + +R  Y+ L
Sbjct: 48  KEEIDH--IIMSKD-----AVSGTLRLF------WTLLSKQEEMVQKFVEEVLRINYKFL 94

Query: 122 SNEVTRIKY---DRAL---KFRTDSDRSRRGNRRYSSEFEDGV-RISTWAELRRKLQYER 174
              ++ IK      ++    +    DR    N+ ++      V R+  + +LR+ L    
Sbjct: 95  ---MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN---VSRLQPYLKLRQALL--- 145

Query: 175 HWKNYNSKEEYSSFYRKAPVREVQEENPDGGYKIGYLIAWILGGRGGILLTLCLSFASWV 234
                                E++            +   ++ G  G             
Sbjct: 146 ---------------------ELRPA--------KNV---LIDGVLG------------- 160

Query: 235 CGKTSSGVVVLVVVAV--------------WIGSNLARCAPLPQGALIALLYMSLKLQTD 280
            GKT      + +                 W+  NL  C   P+  L  L    L  Q D
Sbjct: 161 SGKT-----WVALDVCLSYKVQCKMDFKIFWL--NLKNCNS-PETVLEMLQ--KLLYQID 210

Query: 281 SS 282
            +
Sbjct: 211 PN 212

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	282
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.86
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.86
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.85
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.85
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.85
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.85
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.84
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.83
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.83
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.83
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.83
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.83
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.82
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.81
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.81
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.8
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.8
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.79
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.75
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.74
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.73
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.71
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.7
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	99.7
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.7
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.7
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.69
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.68
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.66
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.65
2guz_A	71	Mitochondrial import inner membrane translocase su	99.65
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.63
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.56
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	99.08
2guz_B	65	Mitochondrial import inner membrane translocase su	98.99
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	90.47

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.86  E-value=7.5e-22  Score=145.93  Aligned_cols=70  Identities=44%  Similarity=0.598  Sum_probs=66.0

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      ..|||+||||+++++.++||++||++++++|||+++.+.+.+.|+.|++||++|+||.+|..||+.+..+
T Consensus         2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~   71 (77)
T 1hdj_A            2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEG   71 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGG
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccc
Confidence            3699999999999999999999999999999999998889999999999999999999999999987644

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.86  E-value=3.5e-23  Score=172.78  Aligned_cols=129  Identities=23%  Similarity=0.338  Sum_probs=93.6

Q ss_pred             CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCch-------HHHHHHHHHHHHHHHhhhhhhhHhhhhhhccCCC
Q 023421           67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS-------RAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTD  139 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~-------~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~~~  139 (282)
                      ...|||+||||+++++.++||+|||++++++||||++..       .+.+.|++|++||+||+||.+|+.||..+.....
T Consensus         8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~~~~   87 (155)
T 2l6l_A            8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCEDDL   87 (155)
T ss_dssp             CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHHHHH
T ss_pred             CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcchhhc
Confidence            357999999999999999999999999999999998754       2678999999999999999999999987653211


Q ss_pred             CCCcCCCCccCCccccccccccchHHHHHHHHHHHHHhhhccccccccccccchhHHhhhhcCCCCccccceeeeecCCC
Q 023421          140 SDRSRRGNRRYSSEFEDGVRISTWAELRRKLQYERHWKNYNSKEEYSSFYRKAPVREVQEENPDGGYKIGYLIAWILGGR  219 (282)
Q Consensus       140 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~leE~~ek~~~~g~k~g~~i~~~~GG~  219 (282)
                      ...     ....++|.  .+...|.     .....||..|.|++.|  .+.++++++                    |  
T Consensus        88 ~~~-----~~~~~~~~--~~~m~~~-----e~~~~f~~~CrCG~~f--~i~~~~l~~--------------------~--  131 (155)
T 2l6l_A           88 RNV-----GPVDAQVY--LEEMSWN-----EGDHSFYLSCRCGGKY--SVSKDEAEE--------------------V--  131 (155)
T ss_dssp             HTT-----CSSSEEEE--TTTSEEE-----TTTTEEEEECSSSCEE--EEETTHHHH--------------------C--
T ss_pred             ccc-----ccccceee--HHHhccc-----cCCcEEEEcCCCCCeE--EecHHHhCC--------------------C--
Confidence            100     00111221  1111121     1234588899999775  355555554                    1  


Q ss_pred             CceeehhhhhhHHhh
Q 023421          220 GGILLTLCLSFASWV  234 (282)
Q Consensus       220 ~G~~l~~c~~cs~w~  234 (282)
                         .++.|..||+|+
T Consensus       132 ---~~v~C~sCSl~~  143 (155)
T 2l6l_A          132 ---SLISCDTCSLII  143 (155)
T ss_dssp             ---CEEECSSSSCEE
T ss_pred             ---CEEECCCCceEE
Confidence               589999999997

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.85  E-value=1.2e-21  Score=145.25  Aligned_cols=69  Identities=45%  Similarity=0.669  Sum_probs=65.8

Q ss_pred             CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ...|||+||||+++++.++||++||++++++|||+++.+.+.+.|++|++||++|+||.+|..||+.+.
T Consensus         5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~   73 (78)
T 2ctp_A            5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGS   73 (78)
T ss_dssp             CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCS
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence            457999999999999999999999999999999999988899999999999999999999999999765

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.85  E-value=1.1e-21  Score=148.85  Aligned_cols=69  Identities=49%  Similarity=0.718  Sum_probs=65.7

Q ss_pred             CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ...|||+||||+++++.++||++||++++++|||+++++.+.+.|++|++||++|+||.+|..||+.+.
T Consensus        15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   83 (88)
T 2cug_A           15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGS   83 (88)
T ss_dssp             SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCC
Confidence            457999999999999999999999999999999999988899999999999999999999999999764

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.85  E-value=1.8e-21  Score=147.64  Aligned_cols=71  Identities=39%  Similarity=0.551  Sum_probs=66.8

Q ss_pred             CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      ...|||+||||+++++.++||++||++++++|||+++.+.+.++|++|++||++|+||.+|..||..+...
T Consensus         5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~   75 (88)
T 2ctr_A            5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA   75 (88)
T ss_dssp             CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence            35799999999999999999999999999999999998889999999999999999999999999987643

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.85  E-value=2.9e-21  Score=143.36  Aligned_cols=69  Identities=48%  Similarity=0.741  Sum_probs=64.4

Q ss_pred             CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ...|||+||||+++++.++||++||++++++|||+++. +.+.+.|++|++||++|+||.+|..||+.+.
T Consensus         5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   74 (79)
T 2dn9_A            5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGS   74 (79)
T ss_dssp             CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCC
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccC
Confidence            45799999999999999999999999999999999984 6688999999999999999999999999764

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.84  E-value=4.5e-21  Score=140.32  Aligned_cols=69  Identities=46%  Similarity=0.667  Sum_probs=62.3

Q ss_pred             hhCCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhh
Q 023421           64 AINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRAL  134 (282)
Q Consensus        64 ~~~~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~  134 (282)
                      .+....|||+||||+++++.++||++||++++++|||+++..  .+.|++|++||++|+||.+|..||+.+
T Consensus         3 ~m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~--~~~f~~i~~Ay~~L~d~~~R~~YD~~g   71 (73)
T 2och_A            3 AMVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG--AEQFKQISQAYEVLSDEKKRQIYDQGG   71 (73)
T ss_dssp             ---CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC--HHHHHHHHHHHHHHTSHHHHHHHHHTC
T ss_pred             cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH--HHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence            355678999999999999999999999999999999998764  588999999999999999999999865

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.83  E-value=5.2e-21  Score=143.00  Aligned_cols=69  Identities=45%  Similarity=0.609  Sum_probs=64.1

Q ss_pred             CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCch--HHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--RAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~--~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ...|||+||||+++++.++||++||++++++|||+++..  .+.+.|++|++||++|+||.+|..||+.+.
T Consensus         7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   77 (82)
T 2ej7_A            7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGS   77 (82)
T ss_dssp             SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCC
T ss_pred             CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence            457999999999999999999999999999999999864  578899999999999999999999999764

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=1e-20  Score=144.52  Aligned_cols=71  Identities=48%  Similarity=0.646  Sum_probs=65.2

Q ss_pred             CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCch--HHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--RAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~--~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      ...|||+||||+++++.++||++||++++++|||+++..  .++++|++|++||++|+||.+|..||+.+...
T Consensus         7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~   79 (92)
T 2dmx_A            7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDS   79 (92)
T ss_dssp             CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCS
T ss_pred             CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence            457999999999999999999999999999999998763  57899999999999999999999999987644

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.83  E-value=2e-21  Score=148.86  Aligned_cols=69  Identities=35%  Similarity=0.563  Sum_probs=64.1

Q ss_pred             CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-------hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-------SRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-------~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ...|||+||||+++++.++||+|||++++++|||+++.       ..+.+.|++|++||+||+||.+|..||..+.
T Consensus        14 ~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   89 (94)
T 1wjz_A           14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence            46899999999999999999999999999999999863       4578999999999999999999999999875

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=3.9e-21  Score=148.88  Aligned_cols=69  Identities=42%  Similarity=0.571  Sum_probs=64.5

Q ss_pred             CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-chHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ...|||+||||+++++.++||++||+|++++|||+++ ++.+.++|++|++||+||+||.+|..||+.+.
T Consensus        15 ~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   84 (99)
T 2yua_A           15 SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLL   84 (99)
T ss_dssp             CSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred             CccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            3579999999999999999999999999999999996 56788999999999999999999999999765

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=8.5e-21  Score=150.20  Aligned_cols=71  Identities=30%  Similarity=0.526  Sum_probs=66.1

Q ss_pred             CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-chHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      ...|||+||||+++++.++||+|||++++++||||++ ++.+.++|++|++||+||+||.+|..||+.+..+
T Consensus        18 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~   89 (112)
T 2ctq_A           18 DTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ   89 (112)
T ss_dssp             CCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence            4589999999999999999999999999999999998 5678999999999999999999999999987643

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.82  E-value=2.3e-20  Score=144.66  Aligned_cols=70  Identities=41%  Similarity=0.555  Sum_probs=63.7

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCch--HHHHHHHHHHHHHHHhhhhhhhHhhhhhhccCC
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--RAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRT  138 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~--~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~~  138 (282)
                      .|||+||||+++++.++||++||++++++|||+++..  .+.+.|++|++||++|+||.+|..||..+..+.
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~   73 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGL   73 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC--
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence            5899999999999999999999999999999998764  478999999999999999999999999876543

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.81  E-value=1.7e-20  Score=143.41  Aligned_cols=72  Identities=38%  Similarity=0.528  Sum_probs=64.5

Q ss_pred             hhCCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           64 AINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        64 ~~~~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      .+....|||+||||+++++.++||++||++++++|||+++..  .+.|++|++||++|+||.+|..||+.+...
T Consensus         3 ~m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~   74 (92)
T 2o37_A            3 AMVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD--TEKFKEISEAFEILNDPQKREIYDQYGLEA   74 (92)
T ss_dssp             -CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC--HHHHHHHHHHHHHHTSHHHHHHHHHHCHHH
T ss_pred             ccccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh--HHHHHHHHHHHHHHCCHHHHHHHHHHCHHH
Confidence            344678999999999999999999999999999999998764  469999999999999999999999987643

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.81  E-value=4.1e-20  Score=145.61  Aligned_cols=69  Identities=41%  Similarity=0.609  Sum_probs=64.3

Q ss_pred             CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ...|||+||||+++++.++||++||+|++++|||+++. +.+.++|++|++||+||+||.+|..||+.+.
T Consensus        15 ~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~   84 (109)
T 2ctw_A           15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGS   84 (109)
T ss_dssp             CSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCH
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcc
Confidence            35799999999999999999999999999999999974 6688999999999999999999999998764

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.80  E-value=3.9e-20  Score=145.62  Aligned_cols=70  Identities=39%  Similarity=0.571  Sum_probs=65.1

Q ss_pred             CCCCCchhhcCCCCCC-CHHHHHHHHHHHHHHhCCCCCCc----hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           66 NGEPDHYKVLGVAQSA-TLADIKRAYRLLARKYHPDVSKD----SRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        66 ~~~~d~Y~iLgv~~~a-~~~~Ik~ayr~l~~~~HPDk~~~----~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ....|||+||||++++ +.++||+|||++++++|||++++    +.+.+.|++|++||++|+||.+|..||+.+.
T Consensus        12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~   86 (109)
T 2qsa_A           12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD   86 (109)
T ss_dssp             TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            3468999999999999 99999999999999999999986    5578999999999999999999999999874

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.80  E-value=1.4e-20  Score=146.79  Aligned_cols=72  Identities=39%  Similarity=0.629  Sum_probs=65.9

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccCCC
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTD  139 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~~~  139 (282)
                      ..|||+||||+++++.++||++||++++++|||+++. +.++++|++|++||++|+||.+|..||+.+.....
T Consensus         2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~   74 (103)
T 1bq0_A            2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE   74 (103)
T ss_dssp             CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSC
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhc
Confidence            3699999999999999999999999999999999984 66889999999999999999999999998765433

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.79  E-value=1.1e-19  Score=138.49  Aligned_cols=66  Identities=27%  Similarity=0.417  Sum_probs=61.6

Q ss_pred             hhCCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHh
Q 023421           64 AINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK  129 (282)
Q Consensus        64 ~~~~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~  129 (282)
                      .+....|||+||||+++++.++||++||++++++||||++++.+.+.|++|++||++|+||.+|..
T Consensus        22 ~~~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~   87 (90)
T 2ys8_A           22 RIRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP   87 (90)
T ss_dssp             HHHTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             HHhcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence            445678999999999999999999999999999999999988899999999999999999999864

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.75  E-value=3.9e-19  Score=141.06  Aligned_cols=63  Identities=22%  Similarity=0.305  Sum_probs=59.2

Q ss_pred             CCchhhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhh
Q 023421           69 PDHYKVLGVAQSATL--ADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRAL  134 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~--~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~  134 (282)
                      .++|+||||+++++.  ++||+|||+|++++||||+++   .++|++|++||+||+||.+|+.||..+
T Consensus         8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~   72 (114)
T 1gh6_A            8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFG   72 (114)
T ss_dssp             HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred             hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhcc
Confidence            589999999999999  999999999999999999886   478999999999999999999999754

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.74  E-value=1.9e-18  Score=149.28  Aligned_cols=70  Identities=37%  Similarity=0.543  Sum_probs=64.9

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-chHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccCC
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRT  138 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~~  138 (282)
                      .|||+||||+++|+.++||+|||++++++||||++ ++.+.++|++|++||++|+||.+|+.||+.+..+.
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~   72 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGL   72 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTC
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccc
Confidence            58999999999999999999999999999999996 56788999999999999999999999999876543

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.71  E-value=7e-18  Score=125.35  Aligned_cols=60  Identities=13%  Similarity=0.344  Sum_probs=55.7

Q ss_pred             CCchhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhh
Q 023421           69 PDHYKVLGVAQS--ATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYD  131 (282)
Q Consensus        69 ~d~Y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD  131 (282)
                      .++|+||||+++  ++.++||+|||++++++|||++++   .++|++|++||++|+|+.+|..++
T Consensus        11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~---~~~f~~i~~AYe~L~~~~~r~~~~   72 (79)
T 1faf_A           11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS---HALMQELNSLWGTFKTEVYNLRMN   72 (79)
T ss_dssp             HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC---HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHHhhHHHHHHHh
Confidence            589999999999  999999999999999999999875   478999999999999999998844

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.70  E-value=2.1e-18  Score=146.00  Aligned_cols=64  Identities=22%  Similarity=0.343  Sum_probs=57.5

Q ss_pred             CCchhhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           69 PDHYKVLGVAQSAT--LADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~--~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      .|+|+||||+++|+  .++||+|||++++++||||++++   ++|++|++||++|+||.+|+.||+.+.
T Consensus        11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~---e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E           11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC---TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH---HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            69999999999998  69999999999999999998763   789999999999999999999999875

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=99.70  E-value=1.2e-18  Score=161.85  Aligned_cols=68  Identities=49%  Similarity=0.729  Sum_probs=0.0

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++++.++++|++|++||++|+||.+|+.||+++.
T Consensus        27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~   94 (329)
T 3lz8_A           27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQ   94 (329)
T ss_dssp             --------------------------------------------------------------------
T ss_pred             ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhc
Confidence            47999999999999999999999999999999999988899999999999999999999999999744

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.70  E-value=1.2e-17  Score=141.49  Aligned_cols=66  Identities=26%  Similarity=0.425  Sum_probs=60.7

Q ss_pred             CchhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCchH------HHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           70 DHYKVLGVAQSA--TLADIKRAYRLLARKYHPDVSKDSR------AVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        70 d~Y~iLgv~~~a--~~~~Ik~ayr~l~~~~HPDk~~~~~------a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      |||+||||++++  +.++||++||++++++||||+++..      +.+.|+.|++||+||+||.+|+.||..+.
T Consensus         2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~   75 (171)
T 1fpo_A            2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH   75 (171)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred             CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence            799999999999  9999999999999999999987532      45789999999999999999999999765

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.70  E-value=9.7e-18  Score=146.12  Aligned_cols=70  Identities=21%  Similarity=0.296  Sum_probs=61.8

Q ss_pred             CCCCCchhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCch------HHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           66 NGEPDHYKVLGVAQS--ATLADIKRAYRLLARKYHPDVSKDS------RAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        66 ~~~~d~Y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~~~~------~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ....|||+||||+++  ++.++||++||+|++++||||+++.      .+.+.|++|++||+||+||.+|+.||..+.
T Consensus        40 ~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~  117 (207)
T 3bvo_A           40 DPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLH  117 (207)
T ss_dssp             CTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred             CCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence            346799999999986  7899999999999999999998743      156789999999999999999999997654

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.69  E-value=6.4e-18  Score=128.07  Aligned_cols=61  Identities=25%  Similarity=0.242  Sum_probs=56.2

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCch--HHHHHHHHHHHHHHHhhhhhhhH
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--RAVEVFKTIRCAYEVLSNEVTRI  128 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~--~a~~~f~~i~~Ay~vLsdp~~R~  128 (282)
                      ..++|+||||+++|+.+|||+|||+|++++||||+++.  .++++|++|++||++|+|...|.
T Consensus        15 ~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~   77 (88)
T 1iur_A           15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLD   77 (88)
T ss_dssp             HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccc
Confidence            36899999999999999999999999999999999874  47899999999999999987773

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.68  E-value=1.7e-17  Score=141.31  Aligned_cols=64  Identities=23%  Similarity=0.368  Sum_probs=59.3

Q ss_pred             CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchH----HHHHHHHHHHHHHHhhhhhhhHhh
Q 023421           67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR----AVEVFKTIRCAYEVLSNEVTRIKY  130 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~----a~~~f~~i~~Ay~vLsdp~~R~~Y  130 (282)
                      ...|+|+||||+++++.++||+|||++++++||||++...    ++++|++|++||+||+||.+|+.|
T Consensus       115 ~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          115 AGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             TTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             CccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            3479999999999999999999999999999999987543    788999999999999999999887

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.66  E-value=3.4e-17  Score=139.86  Aligned_cols=68  Identities=22%  Similarity=0.397  Sum_probs=61.6

Q ss_pred             CCCCCchhhc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           66 NGEPDHYKVL------GVAQ-SATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        66 ~~~~d~Y~iL------gv~~-~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ....|||+||      |+++ +++.++||++||++++++||||+++  +.+.|+.|++||+||+||.+|+.||..+.
T Consensus         8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~l~   82 (181)
T 3uo3_A            8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLKLL   82 (181)
T ss_dssp             CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence            3457999999      4664 8999999999999999999999887  67889999999999999999999999873

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.65  E-value=5.7e-17  Score=123.58  Aligned_cols=55  Identities=24%  Similarity=0.352  Sum_probs=51.1

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCch----HHHHHHHHHHHHHHHhhh
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS----RAVEVFKTIRCAYEVLSN  123 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~----~a~~~f~~i~~Ay~vLsd  123 (282)
                      .++|++|||++.|+.++||+|||+++++|||||+++.    .++++|+.|++||+||.+
T Consensus        33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999998754    378899999999999986

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.65  E-value=7.3e-17  Score=117.41  Aligned_cols=56  Identities=18%  Similarity=0.218  Sum_probs=51.4

Q ss_pred             CCchhhcCCCC-CCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhh
Q 023421           69 PDHYKVLGVAQ-SATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTR  127 (282)
Q Consensus        69 ~d~Y~iLgv~~-~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R  127 (282)
                      .++|+||||++ +++.++||++||+|++++|||++++   .+.|++|++||++|+|+..|
T Consensus        14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~---~~~f~~i~~Aye~L~~~~~r   70 (71)
T 2guz_A           14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS---PFLATKINEAKDFLEKRGIS   70 (71)
T ss_dssp             HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC---HHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHHHHHHHhhhhhc
Confidence            58999999999 7999999999999999999999754   36999999999999998766

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.63  E-value=7.3e-17  Score=126.37  Aligned_cols=60  Identities=15%  Similarity=0.169  Sum_probs=53.0

Q ss_pred             hCCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCch--------HHHHHHHHHHHHHHHhhhhh
Q 023421           65 INGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--------RAVEVFKTIRCAYEVLSNEV  125 (282)
Q Consensus        65 ~~~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~--------~a~~~f~~i~~Ay~vLsdp~  125 (282)
                      .....|||+|||++. |+.++||+|||++++++||||++++        .++++|+.|++||++|+|+.
T Consensus        37 l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           37 LWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             SCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             hcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            345679999999996 9999999999999999999997642        36889999999999999985

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.56  E-value=5.1e-16  Score=158.06  Aligned_cols=72  Identities=36%  Similarity=0.534  Sum_probs=40.7

Q ss_pred             CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-chHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccCC
Q 023421           67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRT  138 (282)
Q Consensus        67 ~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~~  138 (282)
                      ...|||+||||+++|+.++||+|||++++++||||++ ++.+.++|++|++||++|+||.+|+.||+.+..+.
T Consensus        19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~   91 (780)
T 3apo_A           19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGL   91 (780)
T ss_dssp             ----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-----
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccc
Confidence            4589999999999999999999999999999999985 56688999999999999999999999999876543

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=99.08  E-value=7.6e-11  Score=109.09  Aligned_cols=65  Identities=42%  Similarity=0.602  Sum_probs=56.3

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchH----HHHHHHHHHHHHHHhhhhhhhHhhhh
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR----AVEVFKTIRCAYEVLSNEVTRIKYDR  132 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~----a~~~f~~i~~Ay~vLsdp~~R~~YD~  132 (282)
                      ..++|++||+.+.++.++|+++|+++++++|||+.+.+.    +++.|+.|++||++|+||++|..||+
T Consensus       381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~  449 (450)
T 2y4t_A          381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD  449 (450)
T ss_dssp             SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred             chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence            458999999999999999999999999999999988654    78899999999999999999999997

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.99  E-value=6.1e-10  Score=79.21  Aligned_cols=52  Identities=17%  Similarity=0.197  Sum_probs=46.6

Q ss_pred             CchhhcCCCCC---CCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhh
Q 023421           70 DHYKVLGVAQS---ATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNE  124 (282)
Q Consensus        70 d~Y~iLgv~~~---a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp  124 (282)
                      +.|.||||+++   ++.++||++||+|...+||||.+.+   ....+|++|+++|...
T Consensus         5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~---yl~~ki~~Ake~l~~~   59 (65)
T 2guz_B            5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSF---YLQSKVYRAAERLKWE   59 (65)
T ss_dssp             HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCH---HHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCH---HHHHHHHHHHHHHHHH
Confidence            56899999999   9999999999999999999997764   6678899999999754

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=90.47  E-value=0.14  Score=50.70  Aligned_cols=50  Identities=16%  Similarity=0.207  Sum_probs=39.6

Q ss_pred             hhCCCCCchhhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHH
Q 023421           64 AINGEPDHYKVLGVAQSATL--ADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEV  120 (282)
Q Consensus        64 ~~~~~~d~Y~iLgv~~~a~~--~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~v  120 (282)
                      .....+|+|.+||++.+...  .+|+++||++++..+++       .+++..|..|+.|
T Consensus       624 ~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v  675 (681)
T 2pzi_A          624 LKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV  675 (681)
T ss_dssp             HTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred             HHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence            44566789999999776655  77999999999966654       4788888888876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	282
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	4e-15
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	2e-14
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	3e-14
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	9e-14
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	1e-13
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	3e-13
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	5e-12
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	2e-11

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.4 bits (164), Expect = 4e-15
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 7/83 (8%)

Query: 57  SSSAAAAAINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVE------- 109
            SS  A     + D Y +LG   SA ++D+K+ Y+ L   YHPD                
Sbjct: 4   GSSGMALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQ 63

Query: 110 VFKTIRCAYEVLSNEVTRIKYDR 132
            F  I  A+++L NE T+ KYD 
Sbjct: 64  KFIEIDQAWKILGNEETKKKYDL 86

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 2e-14
 Identities = 31/63 (49%), Positives = 43/63 (68%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129
           D+Y+ LG+A+ A+  +IKRAYR  A +YHPD +K+  A E FK I  AY+VLS+   R  
Sbjct: 4   DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREI 63

Query: 130 YDR 132
           +DR
Sbjct: 64  FDR 66

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 64.3 bits (156), Expect = 3e-14
 Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 1/64 (1%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRI 128
           D+Y++LGV+++A   +I++AY+ LA KYHPD ++ D  A   FK I+ AYEVL++   R 
Sbjct: 4   DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63

Query: 129 KYDR 132
            YD+
Sbjct: 64  AYDQ 67

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 63.1 bits (153), Expect = 9e-14
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 8/74 (10%)

Query: 70  DHYKVLGVAQSATL--ADIKRAYRLLARKYHPDVSKDSRAVE------VFKTIRCAYEVL 121
           D++ + G+     L    +   ++ L R+YHPD        E         TI  A++ L
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 122 SNEVTRIKYDRALK 135
            + + R +Y  +L 
Sbjct: 62  RHPLMRAEYLLSLH 75

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 63.4 bits (154), Expect = 1e-13
 Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 4/65 (6%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAV----EVFKTIRCAYEVLSNEV 125
             +K +G+A   T   +K+ YR      HPD +           +F  +  A+    N+ 
Sbjct: 34  TKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQG 93

Query: 126 TRIKY 130
            +  Y
Sbjct: 94  QKPLY 98

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 61.6 bits (149), Expect = 3e-13
 Identities = 8/65 (12%), Positives = 24/65 (36%), Gaps = 5/65 (7%)

Query: 70  DHYKVLGVAQSA--TLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTR 127
              ++L + +        +++AY+  +   HPD         + + +   +     EV  
Sbjct: 12  RLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHA---LMQELNSLWGTFKTEVYN 68

Query: 128 IKYDR 132
           ++ + 
Sbjct: 69  LRMNL 73

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 59.4 bits (143), Expect = 5e-12
 Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 5/90 (5%)

Query: 70  DHYKVLGVAQSA--TLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTR 127
               +LG+ +SA   +  +++AY    +++HPD   D       K +   Y+ + + V  
Sbjct: 9   QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEE---KMKKMNTLYKKMEDGVKY 65

Query: 128 IKYDRALKFRTDSDRSRRGNRRYSSEFEDG 157
                   F   ++    G   +   +   
Sbjct: 66  AHQPDFGGFWDATEIPTYGTDEWEQWWNAF 95

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 2e-11
 Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 10/78 (12%)

Query: 70  DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAV--EVFKTIRCAYEVLSNEVTR 127
           +   V+  A     ++ K+  R L  K+HPD + ++  +  EVFK ++     L      
Sbjct: 17  EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLE----- 71

Query: 128 IKYDRALKFRTDSDRSRR 145
               +A   +     SRR
Sbjct: 72  ---KQAFLDQNADRASRR 86

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	282
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.88
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.82
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.81
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.74
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.73
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.67
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.63
d1ywsa1	82	Diphthamide biosynthesis protein 3, DPH3 {Baker's	82.57
d1wgea1	70	DelGEF-interacting protein 1, DelGIP1 {Mouse (Mus	80.94

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=5.6e-23  Score=149.78  Aligned_cols=68  Identities=41%  Similarity=0.678  Sum_probs=63.5

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-SRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      .+|||+||||+++||.+|||+|||++++++|||++++ +.+++.|+.|++||+||+||.+|..||+++.
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~   70 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGH   70 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTT
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCc
Confidence            4799999999999999999999999999999999874 5678899999999999999999999999764

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.2e-22  Score=147.34  Aligned_cols=70  Identities=44%  Similarity=0.598  Sum_probs=66.2

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhccC
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR  137 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~~~  137 (282)
                      .+|||+||||+++|+.++||+||+++++++|||++..+.+.+.|+.|++||+||+||.+|+.||+++..+
T Consensus         2 ~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~   71 (77)
T d1hdja_           2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEG   71 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGG
T ss_pred             CCChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhh
Confidence            3699999999999999999999999999999999999889999999999999999999999999976644

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=2.3e-21  Score=147.03  Aligned_cols=68  Identities=35%  Similarity=0.593  Sum_probs=62.1

Q ss_pred             CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-------hHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-------SRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~-------~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      .+|||+||||+++++.++||++|+++++++||||+..       +.++++|+.|++||+||+||.+|+.||..+.
T Consensus        15 ~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~~   89 (94)
T d1wjza_          15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             ccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHccC
Confidence            4799999999999999999999999999999999764       2367889999999999999999999998643

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.81  E-value=1e-21  Score=154.07  Aligned_cols=65  Identities=22%  Similarity=0.359  Sum_probs=59.9

Q ss_pred             CCCchhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhhhc
Q 023421           68 EPDHYKVLGVAQSA--TLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK  135 (282)
Q Consensus        68 ~~d~Y~iLgv~~~a--~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~~  135 (282)
                      ..++|+||||+++|  +.++||+|||+||+++||||++++   ++|++|++||+||+||.+|+.||+.+.
T Consensus         7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~~---e~F~~I~~AY~vLsd~~kR~~YD~~~~   73 (114)
T d1gh6a_           7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKMEDGVKYAHQPDFGG   73 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTT---TTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhhH---HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            36899999999999  788999999999999999999865   689999999999999999999998654

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.74  E-value=6.3e-19  Score=129.05  Aligned_cols=62  Identities=13%  Similarity=0.325  Sum_probs=58.0

Q ss_pred             CCchhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHHhhhhhhhHhhhhh
Q 023421           69 PDHYKVLGVAQSA--TLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRA  133 (282)
Q Consensus        69 ~d~Y~iLgv~~~a--~~~~Ik~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~  133 (282)
                      .++|+||||++++  +.++||+|||++++++|||+++++   ++|++|++||++|+|+.+|..||..
T Consensus        11 ~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~~---e~~~~in~Ay~~L~d~~~r~~~~~~   74 (79)
T d1fafa_          11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSH---ALMQELNSLWGTFKTEVYNLRMNLG   74 (79)
T ss_dssp             HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCH---HHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCCH---HHHHHHHHHHHHHCCHHHHHHHccC
Confidence            6899999999988  999999999999999999998764   6899999999999999999999974

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=1.1e-18  Score=126.89  Aligned_cols=65  Identities=26%  Similarity=0.431  Sum_probs=57.3

Q ss_pred             CchhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCch------HHHHHHHHHHHHHHHhhhhhhhHhhhhhh
Q 023421           70 DHYKVLGVAQS--ATLADIKRAYRLLARKYHPDVSKDS------RAVEVFKTIRCAYEVLSNEVTRIKYDRAL  134 (282)
Q Consensus        70 d~Y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~~~~------~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~  134 (282)
                      |||+||||+++  ++.++||++||++++++|||+....      .+.+.|+.|++||+||+||.+|+.|+-.+
T Consensus         2 nyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll~l   74 (76)
T d1fpoa1           2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL   74 (76)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred             ChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence            79999999985  4589999999999999999996532      25678999999999999999999998754

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.67  E-value=5.1e-18  Score=129.25  Aligned_cols=65  Identities=23%  Similarity=0.344  Sum_probs=59.2

Q ss_pred             CCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCchH----HHHHHHHHHHHHHHhhhhhhhHhh
Q 023421           66 NGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR----AVEVFKTIRCAYEVLSNEVTRIKY  130 (282)
Q Consensus        66 ~~~~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~----a~~~f~~i~~Ay~vLsdp~~R~~Y  130 (282)
                      ....++|++||++..++.++||+|||++++++||||++++.    +++.|+.|++||++|+||.+|+.|
T Consensus        30 ~~~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          30 WAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             CTTCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             CCcccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            44568899999999999999999999999999999977543    678999999999999999999987

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=3.9e-17  Score=121.82  Aligned_cols=62  Identities=26%  Similarity=0.305  Sum_probs=55.2

Q ss_pred             CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCch--HHHHHHHHHHHHHHHhhhhhhhHhhhhh
Q 023421           69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--RAVEVFKTIRCAYEVLSNEVTRIKYDRA  133 (282)
Q Consensus        69 ~d~Y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~--~a~~~f~~i~~Ay~vLsdp~~R~~YD~~  133 (282)
                      +++|+||+|+++++.+|||+|||+++++||||++++.  .+.+.|+.|++||++|++   +..||+.
T Consensus        16 ~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~~---~~~~d~~   79 (88)
T d1iura_          16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK---QAFLDQN   79 (88)
T ss_dssp             HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHH---HTTCSSS
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHH---HHHhhcc
Confidence            6999999999999999999999999999999998853  478999999999999975   5556654

>d1ywsa1 g.41.17.1 (A:1-82) Diphthamide biosynthesis protein 3, DPH3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: CSL zinc finger
family: CSL zinc finger
domain: Diphthamide biosynthesis protein 3, DPH3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.57  E-value=0.035  Score=38.88  Aligned_cols=35  Identities=11%  Similarity=0.013  Sum_probs=26.3

Q ss_pred             HHHhhhccccccccccccchhHHhhhhcCCCCccccceeeeecCCCCceeehhhhhhHHhh
Q 023421          174 RHWKNYNSKEEYSSFYRKAPVREVQEENPDGGYKIGYLIAWILGGRGGILLTLCLSFASWV  234 (282)
Q Consensus       174 ~~~~~~~~~~~~~~~~~e~~leE~~ek~~~~g~k~g~~i~~~~GG~~G~~l~~c~~cs~w~  234 (282)
                      .|+..|+|++.  +..+++++++                        |..++.|..||||+
T Consensus        20 ~~~ypCrCGd~--F~it~~dLe~------------------------ge~v~~C~sCSL~I   54 (82)
T d1ywsa1          20 MFTYPCPCGDR--FQIYLDDMFE------------------------GEKVAVCPSCSLMI   54 (82)
T ss_dssp             EEEECCSSSSC--EEEEHHHHHT------------------------TCCEEEETTTTEEE
T ss_pred             EEEeccccCCe--EEEcHHHHhC------------------------CCeEEeCCCCceEE
Confidence            46678899865  4556666654                        36788999999998

>d1wgea1 g.41.17.1 (A:8-77) DelGEF-interacting protein 1, DelGIP1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Rubredoxin-like
superfamily: CSL zinc finger
family: CSL zinc finger
domain: DelGEF-interacting protein 1, DelGIP1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.94  E-value=0.039  Score=37.45  Aligned_cols=36  Identities=14%  Similarity=0.136  Sum_probs=26.6

Q ss_pred             HHHHhhhccccccccccccchhHHhhhhcCCCCccccceeeeecCCCCceeehhhhhhHHhh
Q 023421          173 ERHWKNYNSKEEYSSFYRKAPVREVQEENPDGGYKIGYLIAWILGGRGGILLTLCLSFASWV  234 (282)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~e~~leE~~ek~~~~g~k~g~~i~~~~GG~~G~~l~~c~~cs~w~  234 (282)
                      ..|+..|.|++.  +..++++|++                        |..++.|..||||+
T Consensus        20 ~~~~ypCpCGd~--F~it~~dLe~------------------------ge~V~~C~sCSL~i   55 (70)
T d1wgea1          20 ETYFYPCPCGDN--FAITKEDLEN------------------------GEDVATCPSCSLII   55 (70)
T ss_dssp             TEEEECCSSSSC--EEEEHHHHHT------------------------TCCEEECTTTCCEE
T ss_pred             CEEEeCCCCCCe--EEECHHHHhC------------------------CCeEEeCCCCceEE
Confidence            346678888864  4566666654                        36789999999998