Citrus Sinensis ID: 023431

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
MASMLHLFLVLGTLMVASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWSNGKSSCASTSFRSRNSWLSQELDSTSQNRLKWVQKNYMIYNYCTDTKRFPRGIPKECRNS
cHHHHHHHHHHHHHHHccccccccccEEEEccccEEEEccccEEEEEEccccccCEECccCEEEEEEEEEEEECcccccCEEEEEEEcccccccccEEEEEccccccccCEEEEEEEEcccccCEEEEECccccccccEEEEEEEEccEEEEEEccCEEEEECccccccccccccccCEEEEECcccccccccccCEECccccccEEEEEEEEEECcccccccccccccccccccccccccccccHHHHHHHHHHHcccEEEEccccccccccccccccccc
*ASMLHLFLVLGTLMVASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWSNGKSSCA******RNSWLSQELDSTSQNRLKWVQKNYMIYNYCTDTKRFPRGIPKEC***
xxxxxxHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASMLHLFLVLGTLMVASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWSNGKSSCASTSFRSRNSWLSQELDSTSQNRLKWVQKNYMIYNYCTDTKRFPRGIPKECRNS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Xyloglucan endotransglucosylase/hydrolase protein 22 Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Its induction in case of mechanical stress, suggests that it may contribute in the adaptive changes in morphogenesis by being recruited to alter tissues tensil strength, or flexibility, enabling adaptation to mechanically stresssul environments.confidentQ38857
Probable xyloglucan endotransglucosylase/hydrolase protein Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.probableP93349
Probable xyloglucan endotransglucosylase/hydrolase protein B Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.probableQ8LNZ5

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.4.-.-Glycosyltransferases.probable
2.4.1.-Hexosyltransferases.probable
2.4.1.207Xyloglucan:xyloglucosyl transferase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1UMZ, chain A
Confidence level:very confident
Coverage over the Query: 17-280
View the alignment between query and template
View the model in PyMOL