Citrus Sinensis ID: 023431

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
MASMLHLFLVLGTLMVASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWSNGKSSCASTSFRSRNSWLSQELDSTSQNRLKWVQKNYMIYNYCTDTKRFPRGIPKECRNS
cHHHHHHHHHHHHHHHccccccccccEEEEccccEEEEccccEEEEEEccccccEEEEccEEEEEEEEEEEEEEcccccEEEEEEEEcccccccccEEEEEccccccccEEEEEEEEEcccccEEEEEEEccccccccEEEEEEEEccEEEEEEccEEEEEEEccccccccccccccEEEEEEEcccccccccccEEEEccccccEEEEEEEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHcccEEEEccccccccccccccccccc
cHHHHHHHHHHHHHHHccccccccccEEEEccccEEEEccccEEEEEEEccccccccccccEEEEEEEEEEEEcccccccEEEEEEEcccccccEEEEEEEEccEcccccEEEEEEEEccEccccEEEEccccHHHccEEEEEEEEccEEEEEEccccEEEEcccHHcccccccccccEEEEEccccccHccccccEEcccccccEEEEEEcccccccEcccccccccccccccccccHHHHHccHHHHHHHHHHHHccEEEEcccccccccccccHccccc
MASMLHLFLVLGTLMVAsagsfykdfditwgdGRAKILNNGQLLTLSLdkasgsgfqskneylygkidmqlklvpgnsagtVTAYYlkspgstwdeidfeflgnlsgdpytlhtnvftngkgdreqqfhlwfdpsaafhtysilwnpqrivffvdgtpirelknsesigvpfpknqpmriysslwnaddwatrgglvktdwthapftasyrnfkannacvwsngksscastsfrsrnswlsqelDSTSQNRLKWVQKNYMIYNYctdtkrfprgipkecrns
MASMLHLFLVLGTLMVASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKnsesigvpfpknqPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWSNGKSSCASTSFRSRNSWLsqeldstsqnrlKWVQKNYMIYNyctdtkrfprgipkecrns
MASMLHLFLVLGTLMVASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWSNGKSSCASTSFRSRNSWLSQELDSTSQNRLKWVQKNYMIYNYCTDTKRFPRGIPKECRNS
***MLHLFLVLGTLMVASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWSNGK************************NRLKWVQKNYMIYNYCTDTKRF***********
*ASMLHLFLVLGTLMVASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWSNGKSSCA******RNSWLSQELDSTSQNRLKWVQKNYMIYNYCTDTKRFPRGIPKEC***
MASMLHLFLVLGTLMVASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWSNGKSSCASTSFRSRNSWLSQELDSTSQNRLKWVQKNYMIYNYCTDTKRFPRGIPKECRNS
MASMLHLFLVLGTLMVASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWS*************RNSWLSQELDSTSQNRLKWVQKNYMIYNYCTDTKRFPRGIPKEC***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiii
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASMLHLFLVLGTLMVASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWSNGKSSCASTSFRSRNSWLSQELDSTSQNRLKWVQKNYMIYNYCTDTKRFPRGIPKECRNS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query282 2.2.26 [Sep-21-2011]
Q38857284 Xyloglucan endotransgluco yes no 0.971 0.964 0.744 1e-123
Q38910286 Probable xyloglucan endot no no 0.964 0.951 0.756 1e-122
Q38907284 Probable xyloglucan endot no no 0.914 0.908 0.741 1e-118
P24806269 Xyloglucan endotransgluco no no 0.900 0.944 0.718 1e-115
Q9FI31282 Xyloglucan endotransgluco no no 0.960 0.960 0.672 1e-113
P35694283 Brassinosteroid-regulated no no 0.953 0.950 0.678 1e-109
Q9ZV40305 Probable xyloglucan endot no no 0.975 0.901 0.646 1e-109
Q9M0D2282 Probable xyloglucan endot no no 0.960 0.960 0.672 1e-106
Q8LG58291 Probable xyloglucan endot no no 0.989 0.958 0.628 1e-104
Q38911289 Probable xyloglucan endot no no 0.996 0.972 0.627 1e-104
>sp|Q38857|XTH22_ARATH Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1 Back     alignment and function desciption
 Score =  442 bits (1136), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 207/278 (74%), Positives = 239/278 (85%), Gaps = 4/278 (1%)

Query: 4   MLHLFLVLGTLMVASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYL 63
           +L LFL L  +  + + +F +D +ITWGDGR +I NNG+LLTLSLDK+SGSGFQSKNEYL
Sbjct: 6   LLPLFLSL-IITSSVSANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYL 64

Query: 64  YGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGD 123
           +GK+ MQ+KLVPGNSAGTVT  YLKSPG+TWDEIDFEFLGN SG+PYTLHTNV+T GKGD
Sbjct: 65  FGKVSMQMKLVPGNSAGTVTTLYLKSPGTTWDEIDFEFLGNSSGEPYTLHTNVYTQGKGD 124

Query: 124 REQQFHLWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSS 183
           +EQQF LWFDP+A FHTY+ILWNPQRI+F VDGTPIRE KN ES+G  FPKN+PMR+YSS
Sbjct: 125 KEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSS 184

Query: 184 LWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWSNGKSSC--ASTSFRSRNSWLS 241
           LWNADDWATRGGLVKTDW+ APFTASYR F+   ACVWSNGKSSC  AS    +  SWLS
Sbjct: 185 LWNADDWATRGGLVKTDWSKAPFTASYRGFQ-QEACVWSNGKSSCPNASKQGTTTGSWLS 243

Query: 242 QELDSTSQNRLKWVQKNYMIYNYCTDTKRFPRGIPKEC 279
           QELDST+Q R++WVQ+NYMIYNYCTD KRFP+G+PKEC
Sbjct: 244 QELDSTAQQRMRWVQRNYMIYNYCTDAKRFPQGLPKEC 281
Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Its induction in case of mechanical stress, suggests that it may contribute in the adaptive changes in morphogenesis by being recruited to alter tissues tensil strength, or flexibility, enabling adaptation to mechanically stresssul environments.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 0EC: 7
>sp|Q38910|XTH23_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1 Back     alignment and function description
>sp|Q38907|XTH25_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2 Back     alignment and function description
>sp|P24806|XTH24_ARATH Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2 Back     alignment and function description
>sp|Q9FI31|XTH20_ARATH Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1 Back     alignment and function description
>sp|P35694|BRU1_SOYBN Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1 Back     alignment and function description
>sp|Q9ZV40|XTH21_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1 Back     alignment and function description
>sp|Q9M0D2|XTH18_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1 Back     alignment and function description
>sp|Q8LG58|XTH16_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2 Back     alignment and function description
>sp|Q38911|XTH15_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query282
449457143283 PREDICTED: probable xyloglucan endotrans 0.964 0.961 0.815 1e-129
255570541284 Xyloglucan endotransglucosylase/hydrolas 0.985 0.978 0.808 1e-129
449517329283 PREDICTED: probable xyloglucan endotrans 0.964 0.961 0.811 1e-129
357479713283 Xyloglucan endotransglucosylase/hydrolas 0.964 0.961 0.802 1e-128
224122868298 predicted protein [Populus trichocarpa] 0.989 0.936 0.777 1e-128
356547533285 PREDICTED: xyloglucan endotransglucosyla 0.996 0.985 0.793 1e-128
115334954285 xyloglucan endotransglucosylase/hydrolas 0.978 0.968 0.794 1e-127
363806744287 uncharacterized protein LOC100785313 pre 0.946 0.930 0.810 1e-126
357510001282 Xyloglucan endotransglucosylase/hydrolas 0.960 0.960 0.798 1e-125
356547513285 PREDICTED: probable xyloglucan endotrans 0.985 0.975 0.780 1e-125
>gi|449457143|ref|XP_004146308.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23-like isoform 2 [Cucumis sativus] gi|29500891|emb|CAD87535.1| putative xyloglucan endotransglycosylase [Cucumis sativus] gi|29500899|emb|CAD87533.1| putative xyloglucan endotransglycosylase [Cucumis sativus] Back     alignment and taxonomy information
 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 225/276 (81%), Positives = 244/276 (88%), Gaps = 4/276 (1%)

Query: 7   LFLVL---GTLMVASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYL 63
           LFL L    +L+  S+ +F +DF ITWGDGRAKILNNG+LLTLSLDKASGSGFQS+NEYL
Sbjct: 6   LFLTLLFSASLIAISSANFNQDFQITWGDGRAKILNNGELLTLSLDKASGSGFQSQNEYL 65

Query: 64  YGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGD 123
           +GKIDMQLKLV GNSAGTVTAYYL S GSTWDEIDFEFLGNLSGDPYTLHTNVF+ GKG+
Sbjct: 66  FGKIDMQLKLVAGNSAGTVTAYYLSSKGSTWDEIDFEFLGNLSGDPYTLHTNVFSQGKGN 125

Query: 124 REQQFHLWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSS 183
           REQQFHLWFDP+A FHTYSILWNP RI+F VDGTPIRE KN ES GVPFPK+QPMRIYSS
Sbjct: 126 REQQFHLWFDPTADFHTYSILWNPNRIIFSVDGTPIREFKNWESNGVPFPKDQPMRIYSS 185

Query: 184 LWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWSNGKSSCASTSFRSRNSWLSQE 243
           LWNADDWATRGGLVKTDWT APFTASY+NFKA  ACVWS GKSSC+ +   S NSWLSQE
Sbjct: 186 LWNADDWATRGGLVKTDWTKAPFTASYKNFKA-EACVWSGGKSSCSPSPAGSSNSWLSQE 244

Query: 244 LDSTSQNRLKWVQKNYMIYNYCTDTKRFPRGIPKEC 279
           +DS SQ RLKWVQKNYMIYNYCTDTKRFP+G+P EC
Sbjct: 245 MDSASQERLKWVQKNYMIYNYCTDTKRFPQGLPTEC 280

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255570541|ref|XP_002526228.1| Xyloglucan endotransglucosylase/hydrolase protein 22 precursor, putative [Ricinus communis] gi|223534467|gb|EEF36169.1| Xyloglucan endotransglucosylase/hydrolase protein 22 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449517329|ref|XP_004165698.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23-like isoform 2 [Cucumis sativus] Back     alignment and taxonomy information
>gi|357479713|ref|XP_003610142.1| Xyloglucan endotransglucosylase/hydrolase [Medicago truncatula] gi|355511197|gb|AES92339.1| Xyloglucan endotransglucosylase/hydrolase [Medicago truncatula] Back     alignment and taxonomy information
>gi|224122868|ref|XP_002318936.1| predicted protein [Populus trichocarpa] gi|222857312|gb|EEE94859.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356547533|ref|XP_003542166.1| PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 22-like [Glycine max] Back     alignment and taxonomy information
>gi|115334954|gb|ABI94063.1| xyloglucan endotransglucosylase/hydrolase 3 [Cucumis melo] Back     alignment and taxonomy information
>gi|363806744|ref|NP_001242530.1| uncharacterized protein LOC100785313 precursor [Glycine max] gi|255641964|gb|ACU21249.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|357510001|ref|XP_003625289.1| Xyloglucan endotransglucosylase/hydrolase [Medicago truncatula] gi|355500304|gb|AES81507.1| Xyloglucan endotransglucosylase/hydrolase [Medicago truncatula] gi|388522479|gb|AFK49301.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356547513|ref|XP_003542156.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query282
TAIR|locus:2174497284 TCH4 "Touch 4" [Arabidopsis th 0.971 0.964 0.751 1.6e-116
TAIR|locus:2117567286 XTR6 "xyloglucan endotransglyc 0.953 0.940 0.764 1.2e-115
TAIR|locus:2174597284 XTH25 "xyloglucan endotransglu 0.971 0.964 0.708 1.1e-110
TAIR|locus:2128936269 XTH24 "xyloglucan endotransglu 0.900 0.944 0.718 7.2e-107
TAIR|locus:2162652282 XTH20 "xyloglucan endotransglu 0.960 0.960 0.672 9.2e-107
TAIR|locus:2118746282 XTH18 "xyloglucan endotransglu 0.960 0.960 0.672 5.8e-105
TAIR|locus:2206335282 XTH17 "xyloglucan endotransglu 0.960 0.960 0.669 3.2e-104
TAIR|locus:2053967305 XTH21 "xyloglucan endotransglu 0.975 0.901 0.657 3.2e-104
TAIR|locus:2118751277 XTH19 "xyloglucan endotransglu 0.960 0.978 0.665 7.7e-103
TAIR|locus:2117492287 XTH14 "xyloglucan endotransglu 0.975 0.958 0.654 1.3e-100
TAIR|locus:2174497 TCH4 "Touch 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1148 (409.2 bits), Expect = 1.6e-116, P = 1.6e-116
 Identities = 209/278 (75%), Positives = 238/278 (85%)

Query:     4 MLHLFLVLGTLMVASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYL 63
             +L LFL L      SA +F +D +ITWGDGR +I NNG+LLTLSLDK+SGSGFQSKNEYL
Sbjct:     6 LLPLFLSLIITSSVSA-NFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYL 64

Query:    64 YGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGD 123
             +GK+ MQ+KLVPGNSAGTVT  YLKSPG+TWDEIDFEFLGN SG+PYTLHTNV+T GKGD
Sbjct:    65 FGKVSMQMKLVPGNSAGTVTTLYLKSPGTTWDEIDFEFLGNSSGEPYTLHTNVYTQGKGD 124

Query:   124 REQQFHLWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSS 183
             +EQQF LWFDP+A FHTY+ILWNPQRI+F VDGTPIRE KN ES+G  FPKN+PMR+YSS
Sbjct:   125 KEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSS 184

Query:   184 LWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWSNGKSSC--ASTSFRSRNSWLS 241
             LWNADDWATRGGLVKTDW+ APFTASYR F+   ACVWSNGKSSC  AS    +  SWLS
Sbjct:   185 LWNADDWATRGGLVKTDWSKAPFTASYRGFQ-QEACVWSNGKSSCPNASKQGTTTGSWLS 243

Query:   242 QELDSTSQNRLKWVQKNYMIYNYCTDTKRFPRGIPKEC 279
             QELDST+Q R++WVQ+NYMIYNYCTD KRFP+G+PKEC
Sbjct:   244 QELDSTAQQRMRWVQRNYMIYNYCTDAKRFPQGLPKEC 281
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005618 "cell wall" evidence=IEA;IDA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006073 "cellular glucan metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016762 "xyloglucan:xyloglucosyl transferase activity" evidence=IEA;IDA
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS
GO:0048046 "apoplast" evidence=IEA
GO:0009409 "response to cold" evidence=IEP
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0009611 "response to wounding" evidence=RCA
GO:0009612 "response to mechanical stimulus" evidence=IEP;RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0009408 "response to heat" evidence=IEP
GO:0009733 "response to auxin stimulus" evidence=IEP
GO:0009741 "response to brassinosteroid stimulus" evidence=IEP
GO:0009664 "plant-type cell wall organization" evidence=TAS
TAIR|locus:2117567 XTR6 "xyloglucan endotransglycosylase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174597 XTH25 "xyloglucan endotransglucosylase/hydrolase 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128936 XTH24 "xyloglucan endotransglucosylase/hydrolase 24" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2162652 XTH20 "xyloglucan endotransglucosylase/hydrolase 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118746 XTH18 "xyloglucan endotransglucosylase/hydrolase 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2206335 XTH17 "xyloglucan endotransglucosylase/hydrolase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053967 XTH21 "xyloglucan endotransglucosylase/hydrolase 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118751 XTH19 "xyloglucan endotransglucosylase/hydrolase 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117492 XTH14 "xyloglucan endotransglucosylase/hydrolase 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q41638XTHA_PHAAN2, ., 4, ., 1, ., 2, 0, 70.51730.98220.9486N/Ano
Q38910XTH23_ARATH2, ., 4, ., 1, ., 2, 0, 70.75630.96450.9510nono
Q6YDN9XTH_BRAOB2, ., 4, ., 1, ., 2, 0, 70.51910.96800.9254N/Ano
Q38907XTH25_ARATH2, ., 4, ., 1, ., 2, 0, 70.74140.91480.9084nono
P93349XTH_TOBAC2, ., 4, ., 1, ., 2, 0, 70.54440.91130.8711N/Ano
Q41542XTH_WHEAT2, ., 4, ., 1, ., 2, 0, 70.53660.91130.8771N/Ano
Q40144XTH1_SOLLC2, ., 4, ., 1, ., 2, 0, 70.52120.91130.8682N/Ano
P24806XTH24_ARATH2, ., 4, ., 1, ., 2, 0, 70.71890.90070.9442nono
Q8LNZ5XTHB_PHAAN2, ., 4, ., 1, ., 2, 0, 70.50340.98930.9522N/Ano
Q38857XTH22_ARATH2, ., 4, ., 1, ., 2, 0, 70.74460.97160.9647yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.983
4th Layer2.4.1.2070.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
cd02176263 cd02176, GH16_XET, Xyloglucan endotransglycosylase 1e-158
PLN03161291 PLN03161, PLN03161, Probable xyloglucan endotransg 1e-113
pfam00722174 pfam00722, Glyco_hydro_16, Glycosyl hydrolases fam 7e-85
cd02175212 cd02175, GH16_lichenase, lichenase, member of glyc 8e-29
cd02183203 cd02183, GH16_fungal_CRH1_transglycosylase, glycos 1e-28
cd00413210 cd00413, Glyco_hydrolase_16, glycosyl hydrolase fa 7e-28
pfam0695551 pfam06955, XET_C, Xyloglucan endo-transglycosylase 4e-22
COG2273355 COG2273, SKN1, Beta-glucanase/Beta-glucan syntheta 5e-14
cd08023235 cd08023, GH16_laminarinase_like, Laminarinase, mem 3e-11
cd02178258 cd02178, GH16_beta_agarase, Beta-agarase, member o 4e-04
cd08024330 cd08024, GH16_CCF, Coelomic cytolytic factor, memb 0.003
>gnl|CDD|185685 cd02176, GH16_XET, Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information 
 Score =  441 bits (1137), Expect = e-158
 Identities = 143/264 (54%), Positives = 191/264 (72%), Gaps = 2/264 (0%)

Query: 17  ASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVPG 76
           A A SF ++F +TWG    ++ N+G  + L+LD++SGSGF+SKN+YL+G   M++KL PG
Sbjct: 1   AVAASFDENFFVTWGPDHIRVSNDGTSVQLTLDQSSGSGFKSKNKYLFGFFSMRIKLPPG 60

Query: 77  NSAGTVTAYYLKSPGSTW-DEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPS 135
           +SAGTVTA+YL S G    DEIDFEFLGN++G PYTL TNVF NG G REQ+ +LWFDP+
Sbjct: 61  DSAGTVTAFYLSSQGPDNHDEIDFEFLGNVTGQPYTLQTNVFANGVGGREQRIYLWFDPT 120

Query: 136 AAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSSLWNADDWATRGG 195
           A FHTYSILWNP +IVF+VD  PIR  KN+E++GVP+P +QPM +Y+S+W+  DWAT+GG
Sbjct: 121 ADFHTYSILWNPHQIVFYVDDVPIRVFKNNEALGVPYPSSQPMGVYASIWDGSDWATQGG 180

Query: 196 LVKTDWTHAPFTASYRNFKANNACVWSNGKSSCASTSFRSRNSWLSQELDSTSQNRLKWV 255
            VK DW++APF ASYR+FK +   V      S  S +    N    Q+L +  Q  ++WV
Sbjct: 181 RVKIDWSYAPFVASYRDFKLDGCVVDPGDSFSSCSCTEDWWNGSTYQQLSANQQRAMEWV 240

Query: 256 QKNYMIYNYCTDTKRFPRGIPKEC 279
           ++NYM+Y+YC D KR+P   P EC
Sbjct: 241 RRNYMVYDYCDDRKRYP-VPPPEC 263

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. Length = 263
>gnl|CDD|178706 PLN03161, PLN03161, Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information
>gnl|CDD|216081 pfam00722, Glyco_hydro_16, Glycosyl hydrolases family 16 Back     alignment and domain information
>gnl|CDD|185684 cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185692 cd02183, GH16_fungal_CRH1_transglycosylase, glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>gnl|CDD|185683 cd00413, Glyco_hydrolase_16, glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|219239 pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus Back     alignment and domain information
>gnl|CDD|225182 COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185693 cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185687 cd02178, GH16_beta_agarase, Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185694 cd08024, GH16_CCF, Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 282
PLN03161291 Probable xyloglucan endotransglucosylase/hydrolase 100.0
cd02176263 GH16_XET Xyloglucan endotransglycosylase, member o 100.0
cd02183203 GH16_fungal_CRH1_transglycosylase glycosylphosphat 100.0
cd02175212 GH16_lichenase lichenase, member of glycosyl hydro 100.0
PF00722185 Glyco_hydro_16: Glycosyl hydrolases family 16; Int 100.0
cd00413210 Glyco_hydrolase_16 glycosyl hydrolase family 16. T 100.0
cd02178258 GH16_beta_agarase Beta-agarase, member of glycosyl 100.0
cd08023235 GH16_laminarinase_like Laminarinase, member of the 100.0
cd02177269 GH16_kappa_carrageenase Kappa-carrageenase, member 99.97
cd02180295 GH16_fungal_KRE6_glucanase Saccharomyces cerevisia 99.97
cd02182259 GH16_Strep_laminarinase_like Streptomyces laminari 99.97
cd08024330 GH16_CCF Coelomic cytolytic factor, member of glyc 99.96
cd02179321 GH16_beta_GRP beta-1,3-glucan recognition protein, 99.96
COG2273355 SKN1 Beta-glucanase/Beta-glucan synthetase [Carboh 99.93
PF0695551 XET_C: Xyloglucan endo-transglycosylase (XET) C-te 99.81
PF03935504 SKN1: Beta-glucan synthesis-associated protein (SK 99.69
cd02181293 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D- 99.59
PF06439185 DUF1080: Domain of Unknown Function (DUF1080); Int 94.29
smart00560133 LamGL LamG-like jellyroll fold domain. 93.76
PF09264198 Sial-lect-inser: Vibrio cholerae sialidase, lectin 93.32
PF13385157 Laminin_G_3: Concanavalin A-like lectin/glucanases 93.23
smart00210184 TSPN Thrombospondin N-terminal -like domains. Hepa 90.57
PF10287235 DUF2401: Putative TOS1-like glycosyl hydrolase (DU 88.64
cd00110151 LamG Laminin G domain; Laminin G-like domains are 81.24
>PLN03161 Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.8e-84  Score=589.80  Aligned_cols=278  Identities=53%  Similarity=1.000  Sum_probs=250.9

Q ss_pred             ChhHHHHHHHHHhhhhc-----cccccccCceeeecCCCeEEeCCCcEEEEEEeCCCcCeEEEccceEeEEEEEEEEecC
Q 023431            1 MASMLHLFLVLGTLMVA-----SAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVP   75 (282)
Q Consensus         1 ~a~~~~~~~~~~~~~~~-----~~~~f~~~f~~~w~~~nv~~~~~G~~l~L~ld~~sGs~i~Sk~~~~yG~~eariKlp~   75 (282)
                      ||+++.+|+.+.++.++     ...+|.++|.++|+.+|+.+.++|..|+|+||+.+|++|+||+.|+||+||||||+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~w~~~~~~~~~~g~~l~L~ld~~sgs~~~Sk~~f~yGr~E~riKLp~   80 (291)
T PLN03161          1 MASLKTLLVALFAALAAFDRSFVEADFSKSMYFTWGADHSSMLGNGDNLQLVLDQSSGSGIKSKRAFLFGSIEMLIKLVP   80 (291)
T ss_pred             ChhHHHHHHHHHHHHHhcCCCcccccccccceeeEcCCcEEEeCCCCEEEEEEeCCccCcEEecceEEEEEEEEEEEeCC
Confidence            78886655554444333     3567999999999999999988888899999999999999999999999999999999


Q ss_pred             CCCCceEEEEEeecCCCCCCeeEEEeCCCCCCCceEEEeeeecCCCCCceeeEeeCCCCCCCcEEEEEEEecCcEEEEEC
Q 023431           76 GNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPSAAFHTYSILWNPQRIVFFVD  155 (282)
Q Consensus        76 g~s~G~v~AFwl~~~~~~~~EIDiE~lG~~~g~p~~~~tN~~~~g~g~~~~~~~l~~d~~~dfHtY~i~Wtp~~I~fyVD  155 (282)
                      |+++|+||||||++.++.+|||||||||+++++++++|||+|.+|.+++++++.++||++++||+|+|+|+|++|+||||
T Consensus        81 G~saG~v~AFwl~s~~~~~dEIDiEfLG~~~g~~~~vqtN~y~~g~g~re~~~~l~fDpt~dFHtYsI~Wtp~~I~wyVD  160 (291)
T PLN03161         81 GNSAGTVTAYYLSSTGSRHDEIDFEFLGNVSGQPYTIHTNIYTQGNGSREQQFRPWFDPTADFHNYTIHWNPSEVVWYVD  160 (291)
T ss_pred             CCCCCeEEEEEecCCCCCCCeEEEEecCCCCCCceEEEeceEeCCcCCcceeccccCCCccCcEEEEEEEchhhEEEEEC
Confidence            88899999999999777899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEEecCCCCCCCCCCCCCcEEEEeeeeCCCccCCCCccccCCCCCCeEEEEeEEEEeeecccCCC--CCCCCCCCc
Q 023431          156 GTPIRELKNSESIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWSNG--KSSCASTSF  233 (282)
Q Consensus       156 G~~vr~~~~~~~~g~~~P~~~Pm~l~lnlw~g~~Wat~GG~~~~d~~~~Pf~~~~~~~~v~~~c~~~~~--~~~c~~~~~  233 (282)
                      |++||++++.+..+.+||+++||+|++|||+|++|||+||++|+||+++||+|.|++|++++ |.+.++  ...|...  
T Consensus       161 G~~iRt~~~~~~~g~~yP~~~pM~i~~siW~g~~wAt~gG~~kidw~~aPf~a~~~~f~~~~-C~~~~~~~~~~c~~~--  237 (291)
T PLN03161        161 GTPIRVFRNYENEGIAYPNKQGMRVYSSLWNADNWATQGGRVKIDWTLAPFVARGRRFRARA-CKWNGPVSIKQCADP--  237 (291)
T ss_pred             CEEEEEEEcccccCCcCCCccceEEEEeeecCCCcccCCCceeccCCcCCeeEEeeeEEEEe-eccCCCCCccccCCC--
Confidence            99999999887778889988899999999999999999999999999999999999999999 987653  2468641  


Q ss_pred             CCCCcccc----cCCCHHHHHHHHHHhhcCeEEecccCCCCCCCCCCCCCcCC
Q 023431          234 RSRNSWLS----QELDSTSQNRLKWVQKNYMIYNYCTDTKRFPRGIPKECRNS  282 (282)
Q Consensus       234 ~~~~~~~~----~~l~~~~~~~~~~~~~~~~~y~yc~d~~r~~~~~~~ec~~~  282 (282)
                       +...||+    ++|+++|+++|+|||+||||||||+|++|||+++||||.++
T Consensus       238 -~~~~~~~~~~~~~l~~~~~~~~~~v~~~~m~Y~YC~D~~R~~~~~p~EC~~~  289 (291)
T PLN03161        238 -TPSNWWTSPSYSQLTNAQLTQMKKVRDNFMIYDYCKDTKRFNGVMPPECFKP  289 (291)
T ss_pred             -CccccccCccccCCCHHHHHHHHHHHhCcEEEeccCCCCcCCCCcCcccCCC
Confidence             1245776    47999999999999999999999999999998789999764

>cd02176 GH16_XET Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02183 GH16_fungal_CRH1_transglycosylase glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>cd02175 GH16_lichenase lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>PF00722 Glyco_hydro_16: Glycosyl hydrolases family 16; InterPro: IPR000757 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00413 Glyco_hydrolase_16 glycosyl hydrolase family 16 Back     alignment and domain information
>cd02178 GH16_beta_agarase Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>cd02177 GH16_kappa_carrageenase Kappa-carrageenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02180 GH16_fungal_KRE6_glucanase Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02182 GH16_Strep_laminarinase_like Streptomyces laminarinase-like, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08024 GH16_CCF Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02179 GH16_beta_GRP beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16 Back     alignment and domain information
>COG2273 SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET) Back     alignment and domain information
>PF03935 SKN1: Beta-glucan synthesis-associated protein (SKN1); InterPro: IPR005629 This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1 Back     alignment and domain information
>cd02181 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A Back     alignment and domain information
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function Back     alignment and domain information
>smart00560 LamGL LamG-like jellyroll fold domain Back     alignment and domain information
>PF09264 Sial-lect-inser: Vibrio cholerae sialidase, lectin insertion; InterPro: IPR015344 This domain is predominantly found in Vibrio cholerae sialidase, and adopt a beta sandwich structure consisting of 12-14 strands arranged in two beta-sheets Back     alignment and domain information
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A Back     alignment and domain information
>smart00210 TSPN Thrombospondin N-terminal -like domains Back     alignment and domain information
>PF10287 DUF2401: Putative TOS1-like glycosyl hydrolase (DUF2401); InterPro: IPR018805 This entry represents a family of proteins conserved primarily in fungi Back     alignment and domain information
>cd00110 LamG Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
1umz_A278 Xyloglucan Endotransglycosylase In Complex With The 2e-81
2vh9_A290 Crystal Structure Of Nxg1-Deltayniig In Complex Wit 6e-50
2uwb_A267 Crystal Structure Of The Nasturtium Seedling Mutant 6e-50
2uwc_A271 Crystal Structure Of Nasturtium Xyloglucan Hydrolas 3e-48
2uwa_A274 Crystal Structure Of The Nasturtium Seedling Xylogl 6e-48
3d6e_A201 Crystal Structure Of The Engineered 1,3-1,4-Beta-Gl 2e-18
1mac_A212 Crystal Structure And Site-Directed Mutagenesis Of 2e-17
1byh_A214 Molecular And Active-Site Structure Of A Bacillus ( 2e-17
1u0a_A214 Crystal Structure Of The Engineered Beta-1,3-1,4-En 1e-16
1axk_A 394 Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Le 5e-16
1cpm_A214 Native-Like In Vivo Folding Of A Circularly Permute 5e-16
1cpn_A208 Native-Like In Vivo Folding Of A Circularly Permute 6e-16
1gbg_A214 Bacillus Licheniformis Beta-Glucanase Length = 214 2e-15
3o5s_A238 Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanas 9e-15
1ajk_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 3e-13
3i4i_A234 Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glu 5e-12
3axd_A249 The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta 4e-10
2r49_A241 Mutational And Structural Studies Of E85i Reveal Th 5e-09
3h0o_A240 The Importance Of Ch-Pi Stacking Interactions Betwe 5e-09
3hr9_A241 The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta 1e-08
1mve_A243 Crystal Structure Of A Natural Circularly-Permutate 4e-08
1zm1_A241 Crystal Structures Of Complex F. Succinogenes 1,3-1 4e-08
1ajo_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 8e-06
2hyk_A245 The Crystal Structure Of An Endo-Beta-1,3-Glucanase 7e-05
3atg_A256 Endo-1,3-Beta-Glucanase From Cellulosimicrobium Cel 6e-04
>pdb|1UMZ|A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. Length = 278 Back     alignment and structure 
Iteration: 1

 Score =  298 bits (764), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 147/260 (56%), Positives = 178/260 (68%), Gaps = 2/260 (0%)
Query: 21  SFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVPGNSAG 80
           +F +++  TW     K  N G  + L LDK +G+GFQSK  YL+G   MQ+KLVPG+SAG
Sbjct: 16  AFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAG 75
Query: 81  TVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPSAAFHT 140
           TVTA+YL S  S  DEIDFEFLGN +G PY L TNVFT GKGDREQ+ +LWFDP+  FH 
Sbjct: 76  TVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHY 135
Query: 141 YSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTD 200
           YS+LWN   IVF VD  PIR  KN + +GV FP NQPM+IYSSLWNADDWATRGGL KTD
Sbjct: 136 YSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTD 195
Query: 201 WTHAPFTASYRNFKANNACVWSNGKSSCASTSFRSRNSWLSQELDSTSQNRLKWVQKNYM 260
           W+ APF ASYR+F   + C  S     CA+   R  +    Q+LD+    RL WV++ Y 
Sbjct: 196 WSKAPFIASYRSFHI-DGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYT 254
Query: 261 IYNYCTDTKRFPRGIPKECR 280
           IYNYCTD  R+P  +P EC+
Sbjct: 255 IYNYCTDRSRYP-SMPPECK 273
>pdb|2VH9|A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide Length = 290 Back     alignment and structure
>pdb|2UWB|A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig Length = 267 Back     alignment and structure
>pdb|2UWC|A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 Length = 271 Back     alignment and structure
>pdb|2UWA|A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 Length = 274 Back     alignment and structure
>pdb|3D6E|A Chain A, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase Protein From Bacillus Licheniformis Length = 201 Back     alignment and structure
>pdb|1MAC|A Chain A, Crystal Structure And Site-Directed Mutagenesis Of Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase Length = 212 Back     alignment and structure
>pdb|1BYH|A Chain A, Molecular And Active-Site Structure Of A Bacillus (1-3,1-4)- Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1U0A|A Chain A, Crystal Structure Of The Engineered Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With Beta-Glucan Tetrasaccharide Length = 214 Back     alignment and structure
>pdb|1AXK|A Chain A, Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Length = 394 Back     alignment and structure
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 214 Back     alignment and structure
>pdb|1CPN|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 208 Back     alignment and structure
>pdb|1GBG|A Chain A, Bacillus Licheniformis Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|3O5S|A Chain A, Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168) Length = 238 Back     alignment and structure
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-84 Length = 214 Back     alignment and structure
>pdb|3I4I|A Chain A, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase (Lichenase) Derived From A Mouse Hindgut Metagenome Length = 234 Back     alignment and structure
>pdb|3AXD|A Chain A, The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta-D-Glucanase V18yW203Y IN APO-Form Length = 249 Back     alignment and structure
>pdb|2R49|A Chain A, Mutational And Structural Studies Of E85i Reveal The Flexible Loops Of Fibrobacter Succinogenes 1,3-1,4-beta-d- Glucanaseglucanase Length = 241 Back     alignment and structure
>pdb|3H0O|A Chain A, The Importance Of Ch-Pi Stacking Interactions Between Carbohydrate And Aromatic Residues In Truncated Fibrobacter Succinogenes 1,3-1,4-Beta-D-Glucanase Length = 240 Back     alignment and structure
>pdb|3HR9|A Chain A, The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta-D- Glucanase F40i Mutant Length = 241 Back     alignment and structure
>pdb|1MVE|A Chain A, Crystal Structure Of A Natural Circularly-Permutated Jellyroll Protein: 1,3-1,4-Beta-D-Glucanase From Fibrobacter Succinogenes Length = 243 Back     alignment and structure
>pdb|1ZM1|A Chain A, Crystal Structures Of Complex F. Succinogenes 1,3-1,4-Beta- D-Glucanase And Beta-1,3-1,4-Cellotriose Length = 241 Back     alignment and structure
>pdb|1AJO|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-127 Length = 214 Back     alignment and structure
>pdb|2HYK|A Chain A, The Crystal Structure Of An Endo-Beta-1,3-Glucanase From Alkaliphilic Nocardiopsis Sp.Strain F96 Length = 245 Back     alignment and structure
>pdb|3ATG|A Chain A, Endo-1,3-Beta-Glucanase From Cellulosimicrobium Cellulans Length = 256 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 1e-123
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 1e-108
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 6e-72
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 2e-71
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 2e-70
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 2e-67
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 3e-64
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 3e-60
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 1e-57
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 1e-22
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 6e-17
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 1e-12
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 6e-12
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 2e-11
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 2e-11
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 2e-10
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 3e-10
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 3e-10
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 5e-10
3rq0_A269 Glycosyl hydrolases family protein 16; structural 2e-09
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 2e-09
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 4e-09
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 1e-07
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 8e-07
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 2e-05
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 6e-05
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Length = 278 Back     alignment and structure
 Score =  351 bits (901), Expect = e-123
 Identities = 148/273 (54%), Positives = 179/273 (65%), Gaps = 2/273 (0%)

Query: 10  VLGTLMVASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDM 69
               L      +F +++  TW     K  N G  + L LDK +G+GFQSK  YL+G   M
Sbjct: 5   AFAALRKPVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSM 64

Query: 70  QLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFH 129
           Q+KLVPG+SAGTVTA+YL S  S  DEIDFEFLGN +G PY L TNVFT GKGDREQ+ +
Sbjct: 65  QMKLVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIY 124

Query: 130 LWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSSLWNADD 189
           LWFDP+  FH YS+LWN   IVF VD  PIR  KN + +GV FP NQPM+IYSSLWNADD
Sbjct: 125 LWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADD 184

Query: 190 WATRGGLVKTDWTHAPFTASYRNFKANNACVWSNGKSSCASTSFRSRNSWLSQELDSTSQ 249
           WATRGGL KTDW+ APF ASYR+F  +  C  S     CA+   R  +    Q+LD+   
Sbjct: 185 WATRGGLEKTDWSKAPFIASYRSFHIDG-CEASVEAKFCATQGARWWDQKEFQDLDAFQY 243

Query: 250 NRLKWVQKNYMIYNYCTDTKRFPRGIPKECRNS 282
            RL WV++ Y IYNYCTD  R+P  +P EC+  
Sbjct: 244 RRLSWVRQKYTIYNYCTDRSRYP-SMPPECKRD 275
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Length = 274 Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Length = 238 Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Length = 208 Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Length = 214 Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Length = 234 Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Length = 394 Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Length = 240 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Length = 245 Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Length = 271 Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Length = 280 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Length = 272 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Length = 420 Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Length = 266 Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Length = 251 Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Length = 264 Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Length = 269 Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Length = 288 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Length = 324 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Length = 280 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Length = 363 Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Length = 308 Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Length = 346 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query282
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 100.0
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 100.0
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 100.0
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 100.0
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 100.0
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 100.0
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 100.0
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 100.0
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 100.0
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 100.0
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 100.0
3rq0_A269 Glycosyl hydrolases family protein 16; structural 100.0
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 100.0
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 100.0
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 100.0
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 100.0
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 100.0
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 100.0
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 100.0
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 100.0
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 100.0
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 99.98
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 99.97
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 99.95
2w39_A298 Putative laminarinase; hydrolase, white ROT fungus 99.94
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.86
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.77
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 96.89
3flp_A217 SAP-like pentraxin; physiological doubly-stacked h 92.91
3hbk_A245 Putative glycosyl hydrolase; YP_001302580.1, WAS d 88.22
3u1x_A236 Putative glycosyl hydrolase; glycosyl hydrolysis, 86.03
3imm_A201 Putative secreted glycosylhydrolase; YP_001301887. 84.09
3pvn_A206 C-reactive protein; pentraxin family, immune syste 82.51
3s5q_A214 Putative glycosylhydrolase; concanavalin A-like le 82.36
4dqa_A355 Uncharacterized protein; two domains structure, DU 82.09
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Back     alignment and structure
Probab=100.00  E-value=1.8e-77  Score=548.17  Aligned_cols=259  Identities=57%  Similarity=1.039  Sum_probs=240.2

Q ss_pred             hccccccccCceeeecCCCeEEeCCCcEEEEEEeCCCcCeEEEccceEeEEEEEEEEecCCCCCceEEEEEeecCCCCCC
Q 023431           16 VASAGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWD   95 (282)
Q Consensus        16 ~~~~~~f~~~f~~~w~~~nv~~~~~G~~l~L~ld~~sGs~i~Sk~~~~yG~~eariKlp~g~s~G~v~AFwl~~~~~~~~   95 (282)
                      ...+.+|.++|+++|+++||++..+|+.|+|+|++.+|++|+||+.|+||+||||||+|+++++|+||||||++++|.++
T Consensus        11 ~~~~~~f~~~~~~~w~~~nv~~~~~G~~l~L~l~~~tsa~i~Sk~~f~YGr~Ear~Klp~g~s~G~wpAfwll~~~p~~g   90 (278)
T 1umz_A           11 KPVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHD   90 (278)
T ss_dssp             -CCCCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSSCC
T ss_pred             cccCCcccCCceeeECCCCEEEeCCCCEEEEEECCCccCEEEECcEEECEEEEEEEEeCCCCCCceEEEEEEecCCCCCC
Confidence            45677999999999999999998899889999999999999999999999999999999997789999999999888999


Q ss_pred             eeEEEeCCCCCCCceEEEeeeecCCCCCceeeEeeCCCCCCCcEEEEEEEecCcEEEEECCeEEEEEecCCCCCCCCCCC
Q 023431           96 EIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKN  175 (282)
Q Consensus        96 EIDiE~lG~~~g~p~~~~tN~~~~g~g~~~~~~~l~~d~~~dfHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~~g~~~P~~  175 (282)
                      |||||++|+++++++++|+|+|.+|.+++++++.+++|++++||+|+|+|+|++|+|||||++++++++.+..+.+||++
T Consensus        91 EIDmE~lG~~~g~~~tvhtn~~~~g~~~~~~~~~l~~d~~~dFHtY~i~Wtp~~I~fyVDG~~v~t~~~~~~~g~~~Pf~  170 (278)
T 1umz_A           91 EIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFN  170 (278)
T ss_dssp             EEEEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCS
T ss_pred             eEEEEEeCCCCCCceEEEEEEecCCCCCCcceEecCCCCccCcEEEEEEEecCeEEEEECCeEEEEEecCcCcCccCcCC
Confidence            99999999998899999999999999999999999999999999999999999999999999999999877667789977


Q ss_pred             CCcEEEEeeeeCCCccCCCCccccCCCCCCeEEEEeEEEEeeecccCCCCCCCCCCCcCCCCccccc----CCCHHHHHH
Q 023431          176 QPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWSNGKSSCASTSFRSRNSWLSQ----ELDSTSQNR  251 (282)
Q Consensus       176 ~Pm~l~lnlw~g~~Wat~GG~~~~d~~~~Pf~~~~~~~~v~~~c~~~~~~~~c~~~~~~~~~~~~~~----~l~~~~~~~  251 (282)
                      +||+|+||||+||+|++.||++++||+++||++.|+.|++.+ |.+..+..+|.+    ....||++    +|+++|+++
T Consensus       171 ~P~~lilnlw~GG~Wa~~gG~~~~d~~~~p~v~~vr~~~~~~-c~~~~~~~~c~~----~~~~~~~~~~~~~l~~~~~~~  245 (278)
T 1umz_A          171 QPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDG-CEASVEAKFCAT----QGARWWDQKEFQDLDAFQYRR  245 (278)
T ss_dssp             SCBEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEE-EECCSSSCCCTT----TTCSGGGSGGGSSCCHHHHHH
T ss_pred             CceEEEEEEEECCcccCCCCccccCCCCCCEEEEEEEEEEec-ccCCCCCCccCC----CcccccccCccccCCHHHHHH
Confidence            999999999999999999999899999999999999999999 987544456975    23457775    899999999


Q ss_pred             HHHHhhcCeEEecccCCCCCCCCCCCCCc
Q 023431          252 LKWVQKNYMIYNYCTDTKRFPRGIPKECR  280 (282)
Q Consensus       252 ~~~~~~~~~~y~yc~d~~r~~~~~~~ec~  280 (282)
                      |+|||+||||||||+|++|||+ +||||.
T Consensus       246 ~~~~~~~~~~y~yc~d~~r~~~-~~~ec~  273 (278)
T 1umz_A          246 LSWVRQKYTIYNYCTDRSRYPS-MPPECK  273 (278)
T ss_dssp             HHHHHHHTEEEEGGGCTTTCSS-CCTHHH
T ss_pred             HHHHHHCCeEEecCCCCCcCCC-CCcccC
Confidence            9999999999999999999998 899995
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Back     alignment and structure
>2w39_A Putative laminarinase; hydrolase, white ROT fungus, glycosyl hydrolase, GH7, GH16, LAM16A, family 16, beta-glucan, basidiomycete; HET: NAG BGC LGC; 1.10A {Phanerochaete chrysosporium} PDB: 2cl2_A* 2w52_A* 2wlq_A* 2wne_A* Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Back     alignment and structure
>3hbk_A Putative glycosyl hydrolase; YP_001302580.1, WAS domain of U function (DUF1080), structural genomics; HET: MSE; 2.36A {Parabacteroides distasonis atcc 8503} Back     alignment and structure
>3u1x_A Putative glycosyl hydrolase; glycosyl hydrolysis, carbohydrate metabolism,, structural GE joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Parabacteroides distasonis} Back     alignment and structure
>3imm_A Putative secreted glycosylhydrolase; YP_001301887.1, putative glycosyl hydrolase; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503} Back     alignment and structure
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Back     alignment and structure
>3s5q_A Putative glycosylhydrolase; concanavalin A-like lectins/glucanases, structural genomics, center for structural genomics, JCSG; 1.85A {Parabacteroides distasonis} Back     alignment and structure
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 282
d1umza_267 b.29.1.2 (A:) Xyloglucan endotransglycosylase {Eur 1e-114
d1ajka_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bac 3e-49
d1mvea_243 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fib 4e-26
d2ayha_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {syn 1e-22
d1dypa_271 b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseud 2e-11
d1o4ya_270 b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivo 6e-08
d1upsa1266 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing 4e-05
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Length = 267 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

 Score =  327 bits (840), Expect = e-114
 Identities = 147/262 (56%), Positives = 178/262 (67%), Gaps = 2/262 (0%)

Query: 21  SFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVPGNSAG 80
           +F +++  TW     K  N G  + L LDK +G+GFQSK  YL+G   MQ+KLVPG+SAG
Sbjct: 5   AFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAG 64

Query: 81  TVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPSAAFHT 140
           TVTA+YL S  S  DEIDFEFLGN +G PY L TNVFT GKGDREQ+ +LWFDP+  FH 
Sbjct: 65  TVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHY 124

Query: 141 YSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTD 200
           YS+LWN   IVF VD  PIR  KN + +GV FP NQPM+IYSSLWNADDWATRGGL KTD
Sbjct: 125 YSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTD 184

Query: 201 WTHAPFTASYRNFKANNACVWSNGKSSCASTSFRSRNSWLSQELDSTSQNRLKWVQKNYM 260
           W+ APF ASYR+F   + C  S     CA+   R  +    Q+LD+    RL WV++ Y 
Sbjct: 185 WSKAPFIASYRSFHI-DGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYT 243

Query: 261 IYNYCTDTKRFPRGIPKECRNS 282
           IYNYCTD  R+P  +P EC+  
Sbjct: 244 IYNYCTDRSRYP-SMPPECKRD 264
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Length = 214 Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Length = 243 Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Length = 214 Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Length = 271 Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Length = 270 Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Length = 266 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query282
d1umza_267 Xyloglucan endotransglycosylase {European aspen (P 100.0
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 100.0
d2ayha_214 Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid 100.0
d1mvea_243 Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succi 100.0
d1dypa_271 kappa-Carrageenase, catalytic {Pseudoalteromonas c 99.97
d1o4ya_270 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.97
d1o4za_295 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.96
d1upsa1266 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi 99.96
d2slia1196 Leech intramolecular trans-sialidase, N-terminal d 95.03
d2erfa1206 Thrombospondin 1 N-terminal domain {Human (Homo sa 93.62
d1epwa1218 Botulinum neurotoxin {Clostridium botulinum, serot 93.38
d1a8da1247 Tetanus neurotoxin {Clostridium tetani [TaxId: 151 92.4
d1oq1a_223 Hypothetical protein YesU {Bacillus subtilis [TaxI 92.24
d1b09a_206 C-reactive protein (CRP) {Human (Homo sapiens) [Ta 91.31
d1saca_204 Serum amyloid P component (SAP) {Human (Homo sapie 90.15
d3btaa1207 Botulinum neurotoxin {Clostridium botulinum, serot 89.79
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 85.9
d1w0pa2197 Vibrio cholerae sialidase, N-terminal and insertio 84.24
d1w0pa1192 Vibrio cholerae sialidase, N-terminal and insertio 83.62
d2r1da1177 Ligand-binding domain of neurexin 1beta {Rat (Ratt 83.43
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

Probab=100.00  E-value=8.8e-79  Score=551.95  Aligned_cols=257  Identities=57%  Similarity=1.051  Sum_probs=241.5

Q ss_pred             ccccccCceeeecCCCeEEeCCCcEEEEEEeCCCcCeEEEccceEeEEEEEEEEecCCCCCceEEEEEeecCCCCCCeeE
Q 023431           19 AGSFYKDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEID   98 (282)
Q Consensus        19 ~~~f~~~f~~~w~~~nv~~~~~G~~l~L~ld~~sGs~i~Sk~~~~yG~~eariKlp~g~s~G~v~AFwl~~~~~~~~EID   98 (282)
                      ..+|.++|.++|+++||++.++|..|+|++|+.+|++|+||++|+||+||||||||+|+++|++++||+.++++.++|||
T Consensus         3 ~~~f~~~~~~~w~~~~v~~~~~g~~l~l~ld~~sga~i~Sk~~f~YG~~EariKlp~G~g~g~~~~f~~~s~~~~~dEID   82 (267)
T d1umza_           3 DVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHDEID   82 (267)
T ss_dssp             CCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSSCCEEE
T ss_pred             cccCCCCceecCCCCCEEEeCCCeEEEEEECCcccCceEecceEEeeEEEEEEEcCCCCccEEEEEeeecCCCCCCCeEE
Confidence            45899999999999999999999999999999999999999999999999999999998889999999999989999999


Q ss_pred             EEeCCCCCCCceEEEeeeecCCCCCceeeEeeCCCCCCCcEEEEEEEecCcEEEEECCeEEEEEecCCCCCCCCCCCCCc
Q 023431           99 FEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPSAAFHTYSILWNPQRIVFFVDGTPIRELKNSESIGVPFPKNQPM  178 (282)
Q Consensus        99 iE~lG~~~g~p~~~~tN~~~~g~g~~~~~~~l~~d~~~dfHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm  178 (282)
                      ||++|+..++++++|||+|.+|.+++++++.+++|++++||+|+|+|+|++|+|||||++||++++.+..+.+||.++||
T Consensus        83 iE~lG~~~~~~~~v~tn~~~~g~g~~~~~~~~~~d~s~dFHtY~i~Wtp~~I~fyVDG~~vr~~~n~~~~g~~~p~~~pm  162 (267)
T d1umza_          83 FEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPM  162 (267)
T ss_dssp             EEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCSSCB
T ss_pred             EEEecccCCcccEEEeeEeCCCCCCcceeEecCCCCccCcEEEEEEECcceEEEEECCEEEEEEeccccCCCCCCcceEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999998888999988999


Q ss_pred             EEEEeeeeCCCccCCCCccccCCCCCCeEEEEeEEEEeeecccCCCCCCCCCCCcCCCCcccc----cCCCHHHHHHHHH
Q 023431          179 RIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFKANNACVWSNGKSSCASTSFRSRNSWLS----QELDSTSQNRLKW  254 (282)
Q Consensus       179 ~l~lnlw~g~~Wat~GG~~~~d~~~~Pf~~~~~~~~v~~~c~~~~~~~~c~~~~~~~~~~~~~----~~l~~~~~~~~~~  254 (282)
                      +|++|||+||+|||+||++++||+++||+|.|++|+|++ |.+.+....|..    ....||+    +.|+.+|+++|+|
T Consensus       163 ~i~~niW~g~~Wat~gG~~~~d~~~aPf~a~~~~~~v~~-c~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~  237 (267)
T d1umza_         163 KIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDG-CEASVEAKFCAT----QGARWWDQKEFQDLDAFQYRRLSW  237 (267)
T ss_dssp             EEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEE-EECCSSSCCCTT----TTCSGGGSGGGSSCCHHHHHHHHH
T ss_pred             EEEEeeeeCCCccccCCeeeecCCCCCEEEEEEEEEEEe-cccCCCCcccCC----CCCccccccccccCCHHHHHHHHH
Confidence            999999999999999999999999999999999999999 988766565654    2345766    4799999999999


Q ss_pred             HhhcCeEEecccCCCCCCCCCCCCCcC
Q 023431          255 VQKNYMIYNYCTDTKRFPRGIPKECRN  281 (282)
Q Consensus       255 ~~~~~~~y~yc~d~~r~~~~~~~ec~~  281 (282)
                      ||+||||||||+|++|||. +||||.+
T Consensus       238 ~~~~~~~y~yC~d~~r~~~-~p~EC~~  263 (267)
T d1umza_         238 VRQKYTIYNYCTDRSRYPS-MPPECKR  263 (267)
T ss_dssp             HHHHTEEEEGGGCTTTCSS-CCTHHHH
T ss_pred             HHHCCcEEccCCCCCcCCC-CCcccCC
Confidence            9999999999999999996 8999963
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1o4za_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Back     information, alignment and structure
>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} Back     information, alignment and structure
>d1a8da1 b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium tetani [TaxId: 1513]} Back     information, alignment and structure
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} Back     information, alignment and structure
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d1w0pa2 b.29.1.8 (A:347-543) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1w0pa1 b.29.1.8 (A:25-216) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d2r1da1 b.29.1.4 (A:36-212) Ligand-binding domain of neurexin 1beta {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure