Citrus Sinensis ID: 023533

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-
MEAKSTTMGSSLVVPLIQELAKNTPTIVPSRFTVNDEDHVPLISSSEQVLIPVIDMQKLLSGDFMDSELGKLDHACREWGFFQLVNHGVSSSLVEKVKVEIQEFFNLPMKEKEKFWMRPGETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYLRKPHLFPKLPLPLRDTLEAWSAELGNLSQKLLHQMAKALGIDANDVKALFEEAMQTMRMNYYPPCPKPEQVIGFNSHSDASSITILLQLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVILCYFL
ccccccccccccccccHHHHHHccccccccccccccccccccccccccccccEEEcccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHHHccccccEEEEcccccccccccccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEccccccccccccccccccccccEEEEEEcccccccEEEEccEEEEcccccccEEEEEccEEEEEccccc
ccccccccccccccHHHHHHHHcccccccHHcEcccccccccccccccccccEEEHHHccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccEEEEEEEEEccccEccHHHHEEEEccccHcccccccccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEEcccccccccEEccccccccccEEEEEEccccccEEEEEccEEEEEcccccEEEEEccHHHHHHccccc
meaksttmgssLVVPLIQElakntptivpsrftvndedhvplissseqvlipvidmqkllsgdfmdselgkldHACREWGFFQLVNHGVSSSLVEKVKVEIQEFFnlpmkekekfwmrpgetegfgqnfvvseeqrldwaygftmftlptylrkphlfpklplplrDTLEAWSAELGNLSQKLLHQMAKALGIDANDVKALFEEAMQTMRmnyyppcpkpeqvigfnshsdaSSITILLQLNETVGlqikkdgmwvpviplpdafiinVGDILEVILCYFL
meaksttmgsslVVPLIQELAKNTPTIVPSRFTVNDEDHVplissseqvliPVIDMQKLLSGDFMDSELGKLDHACREWGFFQLVNHGVSSSLVEKVKVEIQEFFNLPMKEKEKFWMRPGETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYLRKPHLFPKLPLPLRDTLEAWSAELGNLSQKLLHQMAKALGIDANDVKALFEEAMQTMRMNYYPPCPKPEQVIGFNSHSDASSITILLQLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVILCYFL
MEAKSTTMGSSLVVPLIQELAKNTPTIVPSRFTVNDEDHVPLISSSEQVLIPVIDMQKLLSGDFMDSELGKLDHACREWGFFQLVNHGvssslvekvkveIQEFFNLPMKEKEKFWMRPGETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYlrkphlfpklplplrDTLEAWSAELGNLSQKLLHQMAKALGIDANDVKALFEEAMQTMRMNYYPPCPKPEQVIGFNSHSDASSITILLQLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVILCYFL
***********LVVPLIQELAKNTPTIVPSRFTVNDEDHVPLISSSEQVLIPVIDMQKLLSGDFMDSELGKLDHACREWGFFQLVNHGVSSSLVEKVKVEIQEFFNLPMKEKEKFWMRPGETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYLRKPHLFPKLPLPLRDTLEAWSAELGNLSQKLLHQMAKALGIDANDVKALFEEAMQTMRMNYYPPCPKPEQVIGFNSHSDASSITILLQLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVILCYF*
***************LIQELAKNTPTIVPSRFTV****************IPVIDMQKLLSGDFMDSELGKLDHACREWGFFQLVNHGVSSSLVEKVKVEIQEFFNLPMKEKEKFWMRPGETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYLRKPHLFPKLPLPLRDTLEAWSAELGNLSQKLLHQMAKALGIDANDVKALFEEAMQTMRMNYYPPCPKPEQVIGFNSHSDASSITILLQLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVILCYFL
**********SLVVPLIQELAKNTPTIVPSRFTVNDEDHVPLISSSEQVLIPVIDMQKLLSGDFMDSELGKLDHACREWGFFQLVNHGVSSSLVEKVKVEIQEFFNLPMKEKEKFWMRPGETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYLRKPHLFPKLPLPLRDTLEAWSAELGNLSQKLLHQMAKALGIDANDVKALFEEAMQTMRMNYYPPCPKPEQVIGFNSHSDASSITILLQLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVILCYFL
**********SLVVPLIQELA*NTPTIVPSRFTVNDEDHVPLISSSEQVLIPVIDMQKLLSGDFMDSELGKLDHACREWGFFQLVNHGVSSSLVEKVKVEIQEFFNLPMKEKEKFWMRPGETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYLRKPHLFPKLPLPLRDTLEAWSAELGNLSQKLLHQMAKALGIDANDVKALFEEAMQTMRMNYYPPCPKPEQVIGFNSHSDASSITILLQLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVILCYF*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiii
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MEAKSTTMGSSLVVPLIQELAKNTPTIVPSRFTVNDEDHVPLISSSEQVLIPVIDMQKLLSGDFMDSELGKLDHACREWGFFQLVNHGVSSSLVEKVKVEIQEFFNLPMKEKEKFWMRPGETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYLRKPHLFPKLPLPLRDTLEAWSAELGNLSQKLLHQMAKALGIDANDVKALFEEAMQTMRMNYYPPCPKPEQVIGFNSHSDASSITILLQLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVILCYFL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query281 2.2.26 [Sep-21-2011]
Q39224358 Protein SRG1 OS=Arabidops yes no 0.982 0.770 0.567 1e-91
D4N500364 Thebaine 6-O-demethylase N/A no 0.978 0.755 0.522 8e-80
D4N502360 Codeine O-demethylase OS= N/A no 0.957 0.747 0.525 8e-79
D4N501364 Probable 2-oxoglutarate/F N/A no 0.975 0.752 0.514 2e-78
A2A1A0352 S-norcoclaurine synthase N/A no 0.964 0.769 0.375 3e-51
O04706365 Gibberellin 20 oxidase 1- N/A no 0.925 0.712 0.308 4e-35
Q7XZQ8365 Flavone synthase OS=Petro N/A no 0.836 0.643 0.346 6e-35
O04707365 Gibberellin 20 oxidase 1- N/A no 0.925 0.712 0.304 1e-34
O04705361 Gibberellin 20 oxidase 1- N/A no 0.925 0.720 0.304 3e-34
Q7XZQ7368 Flavanone 3-dioxygenase O N/A no 0.907 0.692 0.337 8e-33
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function desciption
 Score =  336 bits (861), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 159/280 (56%), Positives = 214/280 (76%), Gaps = 4/280 (1%)

Query: 1   MEAKSTTMGSSLVVPLIQELAK-NTPTIVPSRFTVNDEDHVPLISSSE-QVLIPVIDMQK 58
           MEAK     SS++VP +QE+ K  T T VP R+  +D+D   +    + ++ IP+IDM++
Sbjct: 1   MEAKGAAQWSSILVPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKR 60

Query: 59  LLSGDFMDSELGKLDHACREWGFFQLVNHGVSSSLVEKVKVEIQEFFNLPMKEKEKFWMR 118
           L S   MDSE+ KLD AC+EWGFFQLVNHG+ SS ++KVK EIQ+FFNLPM+EK+KFW R
Sbjct: 61  LCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQR 120

Query: 119 PGETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYLRKPHLFPKLPLPLRDTLEAWSAELGN 178
           P E EGFGQ FVVSE+Q+LDWA  F     P  LRKPHLFPKLPLP RDTLE +S+E+ +
Sbjct: 121 PDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQS 180

Query: 179 LSQKLLHQMAKALGIDANDVKALFE--EAMQTMRMNYYPPCPKPEQVIGFNSHSDASSIT 236
           +++ L+ +MA+AL I   +++ LF+  +++Q+MRMNYYPPCP+P+QVIG   HSD+  +T
Sbjct: 181 VAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLT 240

Query: 237 ILLQLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVI 276
           +L+Q+N+  GLQIKKDG WVPV PLP+AFI+N+GD+LE+I
Sbjct: 241 VLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEII 280

Arabidopsis thaliana (taxid: 3702)
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function description
>sp|A2A1A0|NCS1_COPJA S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1 Back     alignment and function description
>sp|O04706|GAO1B_WHEAT Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1 Back     alignment and function description
>sp|Q7XZQ8|FNSI_PETCR Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1 Back     alignment and function description
>sp|O04707|GAO1A_WHEAT Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1 Back     alignment and function description
>sp|O04705|GAO1D_WHEAT Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1 Back     alignment and function description
>sp|Q7XZQ7|FL3H_PETCR Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query281
225463356354 PREDICTED: protein SRG1 [Vitis vinifera] 0.967 0.768 0.638 4e-99
225462507366 PREDICTED: protein SRG1 [Vitis vinifera] 0.967 0.743 0.628 3e-98
224061385355 predicted protein [Populus trichocarpa] 0.982 0.777 0.624 7e-96
225453297364 PREDICTED: protein SRG1 [Vitis vinifera] 0.975 0.752 0.617 1e-95
224061381359 predicted protein [Populus trichocarpa] 0.978 0.766 0.602 2e-95
224061027362 predicted protein [Populus trichocarpa] 0.960 0.745 0.616 2e-95
359483589361 PREDICTED: LOW QUALITY PROTEIN: protein 0.975 0.759 0.611 2e-95
449434270358 PREDICTED: protein SRG1-like [Cucumis sa 0.939 0.737 0.592 3e-90
297734657316 unnamed protein product [Vitis vinifera] 0.800 0.712 0.675 3e-90
255575141364 Leucoanthocyanidin dioxygenase, putative 0.932 0.719 0.602 4e-90
>gi|225463356|ref|XP_002271080.1| PREDICTED: protein SRG1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  367 bits (941), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 177/277 (63%), Positives = 217/277 (78%), Gaps = 5/277 (1%)

Query: 4   KSTTMGSSLVVPLIQELAKNTPTIVPSRFTVNDEDHVPLISSSE----QVLIPVIDMQKL 59
           K T++G SL VP +QELAK T T VP R+   ++D  P +S S      +  PVID  +L
Sbjct: 5   KLTSLGGSLPVPCVQELAKKTLTTVPPRYLRPEQDP-PFLSDSSTTCSSIHAPVIDFNRL 63

Query: 60  LSGDFMDSELGKLDHACREWGFFQLVNHGVSSSLVEKVKVEIQEFFNLPMKEKEKFWMRP 119
           +SGD MDSEL KL +AC+EWGFFQL NHGV S+LVEKVKVE+QEFFNLPM+EK+KFW +P
Sbjct: 64  VSGDSMDSELDKLHYACKEWGFFQLTNHGVISTLVEKVKVEVQEFFNLPMEEKKKFWQQP 123

Query: 120 GETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYLRKPHLFPKLPLPLRDTLEAWSAELGNL 179
            + +GFGQ FVVSEEQ+LDWA  F M TLPTYLRKPHLFPKLP+ LRD+LE ++ EL NL
Sbjct: 124 EDLQGFGQAFVVSEEQKLDWADMFYMITLPTYLRKPHLFPKLPISLRDSLEIYAVELRNL 183

Query: 180 SQKLLHQMAKALGIDANDVKALFEEAMQTMRMNYYPPCPKPEQVIGFNSHSDASSITILL 239
           +  +L  +AKAL ++AND+K LFEE  Q MRMNYYPPCP+P+QVIG   HSDA  +TILL
Sbjct: 184 AMTILGFIAKALKMEANDMKELFEEGHQAMRMNYYPPCPQPDQVIGLTPHSDAVGLTILL 243

Query: 240 QLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVI 276
           Q+NE  GLQI+KDGMWVP+ PLP AFI+N+GDILE++
Sbjct: 244 QVNEMEGLQIRKDGMWVPIKPLPGAFIVNIGDILEIV 280

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225462507|ref|XP_002269087.1| PREDICTED: protein SRG1 [Vitis vinifera] gi|297740615|emb|CBI30797.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224061385|ref|XP_002300453.1| predicted protein [Populus trichocarpa] gi|222847711|gb|EEE85258.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225453297|ref|XP_002268288.1| PREDICTED: protein SRG1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224061381|ref|XP_002300451.1| predicted protein [Populus trichocarpa] gi|222847709|gb|EEE85256.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224061027|ref|XP_002300322.1| predicted protein [Populus trichocarpa] gi|222847580|gb|EEE85127.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359483589|ref|XP_003632983.1| PREDICTED: LOW QUALITY PROTEIN: protein SRG1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449434270|ref|XP_004134919.1| PREDICTED: protein SRG1-like [Cucumis sativus] gi|449479526|ref|XP_004155625.1| PREDICTED: protein SRG1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297734657|emb|CBI16708.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255575141|ref|XP_002528475.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223532084|gb|EEF33892.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query281
TAIR|locus:2020407358 SRG1 "senescence-related gene 0.982 0.770 0.496 1.6e-70
TAIR|locus:2122679353 AT4G25310 [Arabidopsis thalian 0.967 0.770 0.483 2e-65
TAIR|locus:2202980356 AT1G78550 [Arabidopsis thalian 0.982 0.775 0.471 8.5e-65
TAIR|locus:2020422361 AT1G17010 [Arabidopsis thalian 0.982 0.764 0.478 1.6e-63
TAIR|locus:2122669356 AT4G25300 [Arabidopsis thalian 0.978 0.772 0.473 2e-63
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.925 0.714 0.408 4e-51
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.921 0.698 0.300 7.2e-36
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.911 0.725 0.308 1.3e-34
TAIR|locus:2082058363 JRG21 "jasmonate-regulated gen 0.925 0.716 0.307 1.4e-32
TAIR|locus:2010242348 AT1G49390 [Arabidopsis thalian 0.886 0.715 0.303 4.7e-32
TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
 Identities = 139/280 (49%), Positives = 191/280 (68%)

Query:     1 MEAKSTTMGSSLVVPLIQELAKN-TPTIVPSRFTVNDEDHVPLISSSE-QVLIPVIDMQK 58
             MEAK     SS++VP +QE+ K  T T VP R+  +D+D   +    + ++ IP+IDM++
Sbjct:     1 MEAKGAAQWSSILVPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKR 60

Query:    59 LLSGDFMDSELGKLDHACREWGFFQLVNHGXXXXXXXXXXXXIQEFFNLPMKEKEKFWMR 118
             L S   MDSE+ KLD AC+EWGFFQLVNHG            IQ+FFNLPM+EK+KFW R
Sbjct:    61 LCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQR 120

Query:   119 PGETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYXXXXXXXXXXXXXXXDTLEAWSAELGN 178
             P E EGFGQ FVVSE+Q+LDWA  F     P                 DTLE +S+E+ +
Sbjct:   121 PDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQS 180

Query:   179 LSQKLLHQMAKALGIDANDVKALFEE--AMQTMRMNYYPPCPKPEQVIGFNSHSDASSIT 236
             +++ L+ +MA+AL I   +++ LF++  ++Q+MRMNYYPPCP+P+QVIG   HSD+  +T
Sbjct:   181 VAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLT 240

Query:   237 ILLQLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVI 276
             +L+Q+N+  GLQIKKDG WVPV PLP+AFI+N+GD+LE+I
Sbjct:   241 VLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEII 280
GO:0005737 "cytoplasm" evidence=ISM
GO:0009813 "flavonoid biosynthetic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009737 "response to abscisic acid stimulus" evidence=RCA
GO:0009793 "embryo development ending in seed dormancy" evidence=RCA
GO:0009830 "cell wall modification involved in abscission" evidence=RCA
GO:0009845 "seed germination" evidence=RCA
GO:0010162 "seed dormancy process" evidence=RCA
GO:0010260 "organ senescence" evidence=IEP;RCA
GO:0016682 "oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor" evidence=ISS
TAIR|locus:2122679 AT4G25310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020422 AT1G17010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122669 AT4G25300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082058 JRG21 "jasmonate-regulated gene 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010242 AT1G49390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q39224SRG1_ARATHNo assigned EC number0.56780.98220.7709yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00003362001
SubName- Full=Chromosome undetermined scaffold_143, whole genome shotgun sequence; (354 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query281
PLN02216357 PLN02216, PLN02216, protein SRG1 1e-126
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-89
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 8e-66
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 5e-53
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 1e-49
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 5e-47
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 3e-44
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 7e-43
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 4e-42
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 7e-41
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 8e-41
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 2e-40
PLN02947374 PLN02947, PLN02947, oxidoreductase 7e-39
PLN02704335 PLN02704, PLN02704, flavonol synthase 4e-38
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 4e-37
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 5e-36
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 2e-35
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 4e-33
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 2e-32
PLN02485329 PLN02485, PLN02485, oxidoreductase 2e-30
PLN02904357 PLN02904, PLN02904, oxidoreductase 5e-30
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 2e-29
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 2e-26
PLN02997325 PLN02997, PLN02997, flavonol synthase 1e-25
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 4e-20
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 1e-17
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 7e-15
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 3e-13
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information 
 Score =  363 bits (933), Expect = e-126
 Identities = 163/279 (58%), Positives = 207/279 (74%), Gaps = 3/279 (1%)

Query: 1   MEAKSTTMGSSLVVPLIQELAK-NTPTIVPSRFTVNDEDHVP-LISSSEQVLIPVIDMQK 58
           MEAK  T  SS++VP +QE+ K    T VP R+  +D+D     + S     IP+IDM++
Sbjct: 1   MEAKGATQWSSIIVPSVQEMVKEKMITTVPPRYVRSDQDKTEIAVDSGLSSEIPIIDMKR 60

Query: 59  LLSGDFMDSELGKLDHACREWGFFQLVNHGVSSSLVEKVKVEIQEFFNLPMKEKEKFWMR 118
           L S   MDSE+ KLD AC+EWGFFQLVNHG+ SS ++KVK EIQ+FFNLPM+EK+K W R
Sbjct: 61  LCSSTAMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKLWQR 120

Query: 119 PGETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYLRKPHLFPKLPLPLRDTLEAWSAELGN 178
           PGE EGFGQ FVVSE+Q+LDWA  F +   P  LRKPHLFPKLPLP RDTLE +SAE+ +
Sbjct: 121 PGEIEGFGQAFVVSEDQKLDWADMFFLTMQPVRLRKPHLFPKLPLPFRDTLETYSAEVKS 180

Query: 179 LSQKLLHQMAKALGIDANDVKALF-EEAMQTMRMNYYPPCPKPEQVIGFNSHSDASSITI 237
           +++ L  +MA AL I   +++ LF ++  Q++RMNYYPPCP+P+QVIG   HSDA  +TI
Sbjct: 181 IAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTI 240

Query: 238 LLQLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVI 276
           LLQ+NE  GLQIKKDG WV V PLP+A ++NVGDILE+I
Sbjct: 241 LLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILEII 279

Length = 357
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 281
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02947374 oxidoreductase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02904357 oxidoreductase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02704335 flavonol synthase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02997325 flavonol synthase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02485329 oxidoreductase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.92
PLN03176120 flavanone-3-hydroxylase; Provisional 99.89
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.72
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 88.05
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 84.58
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 82.2
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 81.82
>PLN02216 protein SRG1 Back     alignment and domain information 
Probab=100.00  E-value=4.8e-70  Score=499.18  Aligned_cols=280  Identities=58%  Similarity=0.985  Sum_probs=242.4

Q ss_pred             CCccccccCCccccccHHHHHHc-CCCCCCCCCccCCCCCCCCcCC--CCCCCcCeEecCCCCCCCcchHHHHHHHHHhh
Q 023533            1 MEAKSTTMGSSLVVPLIQELAKN-TPTIVPSRFTVNDEDHVPLISS--SEQVLIPVIDMQKLLSGDFMDSELGKLDHACR   77 (281)
Q Consensus         1 ~~~~~~~~~~~~~~~~v~~~~~~-~~~~~p~~y~~p~~~~~~~~~~--~~~~~iPvIDls~l~~~~~~~~~~~~l~~A~~   77 (281)
                      |+.+..+.-.++.++.|+.|+.+ +++.||++|++|.+++|. ...  .....||+|||+.+.+++..++++++|.+||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~p~~~~~~-~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~l~~Ac~   79 (357)
T PLN02216          1 MEAKGATQWSSIIVPSVQEMVKEKMITTVPPRYVRSDQDKTE-IAVDSGLSSEIPIIDMKRLCSSTAMDSEVEKLDFACK   79 (357)
T ss_pred             CCccccCcCCCccchhHHHHHhcCCCCCCCHhhCcCcccCCc-cccccCcCCCCCeEEChhccCCccHHHHHHHHHHHHH
Confidence            56663332234457889999887 889999999999999875 311  11358999999998766542336689999999


Q ss_pred             hccEEEEEcCCCChHHHHHHHHHHHHHhCCCHHHHhhcccCCCCcccccccccccccccCCccccccccccCCCCCCCCC
Q 023533           78 EWGFFQLVNHGVSSSLVEKVKVEIQEFFNLPMKEKEKFWMRPGETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYLRKPHL  157 (281)
Q Consensus        78 ~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~  157 (281)
                      +||||||+||||+.++++++++.+++||+||.|+|+++...++.++||+........+..||+|.|.+...|.....+|.
T Consensus        80 ~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~  159 (357)
T PLN02216         80 EWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKLWQRPGEIEGFGQAFVVSEDQKLDWADMFFLTMQPVRLRKPHL  159 (357)
T ss_pred             HCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcCCCCccccCccccccccccCCceeeeeeeccCcccccchh
Confidence            99999999999999999999999999999999999999765556889976554444567799999988766655567899


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHhhc-ccccceeeeeCCCCCCCCccccccccccCceE
Q 023533          158 FPKLPLPLRDTLEAWSAELGNLSQKLLHQMAKALGIDANDVKALFEE-AMQTMRMNYYPPCPKPEQVIGFNSHSDASSIT  236 (281)
Q Consensus       158 wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~-~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lT  236 (281)
                      ||+.+++||+.+++|+++|++|+.+||++|+++||+++++|.+.+.+ ..+.||++|||||++++..+|+++|||+|+||
T Consensus       160 WP~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lT  239 (357)
T PLN02216        160 FPKLPLPFRDTLETYSAEVKSIAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLT  239 (357)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCchheeEEeecCCCCCcccccCccCcccCceEE
Confidence            99988999999999999999999999999999999999999998876 45789999999999988899999999999999


Q ss_pred             EEeeCCCCCCceeeeCCeeEeccCCCCeEEEEhhhHHHHHhCCCC
Q 023533          237 ILLQLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVILCYFL  281 (281)
Q Consensus       237 lL~q~~~~~GLqV~~~g~W~~V~p~pg~~vVniGD~l~~~TnG~l  281 (281)
                      ||+|+++++||||+++|+|++|+|+||++||||||+||+||||+|
T Consensus       240 lL~q~~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~  284 (357)
T PLN02216        240 ILLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTY  284 (357)
T ss_pred             EEEecCCCCceeEEECCEEEECCCCCCeEEEEcchhhHhhcCCee
Confidence            999965799999999999999999999999999999999999986

>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query281
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 6e-25
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 6e-25
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 5e-24
1w9y_A319 The Structure Of Acc Oxidase Length = 319 1e-20
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 7e-11
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 4e-04
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 116/233 (49%), Gaps = 8/233 (3%)
Query: 51  IPVIDMQKLLSGD--FMDSELGKLDHACREWGFFQLVNHGXXXXXXXXXXXXIQEFFNLP 108
           +P ID++ + S D    ++ + +L  A  +WG   L+NHG             +EFF+L 
Sbjct: 47  VPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLS 106
Query: 109 MKEKEKFW--MRPGETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYXXXXXXXXXXXXXXX 166
           ++EKEK+      G+ +G+G     +   +L+W   F     P                 
Sbjct: 107 VEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYI 166
Query: 167 DTLEAWSAELGNLSQKLLHQMAKALGIDANDVK---ALFEEAMQTMRMNYYPPCPKPEQV 223
           +    ++  L  L+ K+   ++  LG++ + ++      EE +  M++NYYP CP+PE  
Sbjct: 167 EATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELA 226
Query: 224 IGFNSHSDASSITILLQLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVI 276
           +G  +H+D S++T +L  N   GLQ+  +G WV    +PD+ ++++GD LE++
Sbjct: 227 LGVEAHTDVSALTFILH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEIL 278
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query281
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-113
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-105
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 2e-75
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 4e-62
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 2e-61
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 9e-56
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-05
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  330 bits (847), Expect = e-113
 Identities = 78/279 (27%), Positives = 147/279 (52%), Gaps = 16/279 (5%)

Query: 12  LVVPLIQELAKNTPTIVPSRFTVNDEDHVPLIS-------SSEQVLIPVIDMQKLLSGDF 64
           + V  ++ LAK+    +P  + +  ++ +  I+         +   +P ID++ + S D 
Sbjct: 2   VAVERVESLAKSGIISIPKEY-IRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDE 60

Query: 65  MDSE--LGKLDHACREWGFFQLVNHGVSSSLVEKVKVEIQEFFNLPMKEKEKFW--MRPG 120
              E  + +L  A  +WG   L+NHG+ + L+E+VK   +EFF+L ++EKEK+      G
Sbjct: 61  KIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATG 120

Query: 121 ETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYLRKPHLFPKLPLPLRDTLEAWSAELGNLS 180
           + +G+G     +   +L+W   F     P   R   ++PK P    +    ++  L  L+
Sbjct: 121 KIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLA 180

Query: 181 QKLLHQMAKALGIDANDVKALF---EEAMQTMRMNYYPPCPKPEQVIGFNSHSDASSITI 237
            K+   ++  LG++ + ++      EE +  M++NYYP CP+PE  +G  +H+D S++T 
Sbjct: 181 TKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTF 240

Query: 238 LLQLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVI 276
           +L  N   GLQ+  +G WV    +PD+ ++++GD LE++
Sbjct: 241 ILH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEIL 278
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query281
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 85.98
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=2.7e-69  Score=494.23  Aligned_cols=267  Identities=29%  Similarity=0.572  Sum_probs=237.4

Q ss_pred             ccccHHHHHHcCCCCCCCCCccCCCCCCCCcCC---CC----CCCcCeEecCCCCCCCcchH--HHHHHHHHhhhccEEE
Q 023533           13 VVPLIQELAKNTPTIVPSRFTVNDEDHVPLISS---SE----QVLIPVIDMQKLLSGDFMDS--ELGKLDHACREWGFFQ   83 (281)
Q Consensus        13 ~~~~v~~~~~~~~~~~p~~y~~p~~~~~~~~~~---~~----~~~iPvIDls~l~~~~~~~~--~~~~l~~A~~~~Gff~   83 (281)
                      ++++|++|+++|+.+||++|++|.++++. ...   ..    ..+||||||+.+.+++...+  .+++|.+||++|||||
T Consensus         3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~-~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~   81 (356)
T 1gp6_A            3 AVERVESLAKSGIISIPKEYIRPKEELES-INDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMH   81 (356)
T ss_dssp             CCCCHHHHHHTTCSSCCGGGSCCHHHHTT-CCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEE
T ss_pred             CcccHHHHHhcCCCCCCHHhcCCchhccc-ccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEE
Confidence            57899999999999999999999888765 221   01    24699999999876554222  4589999999999999


Q ss_pred             EEcCCCChHHHHHHHHHHHHHhCCCHHHHhhcccCC--CCcccccccccccccccCCccccccccccCCCCCCCCCCCCC
Q 023533           84 LVNHGVSSSLVEKVKVEIQEFFNLPMKEKEKFWMRP--GETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYLRKPHLFPKL  161 (281)
Q Consensus        84 l~nhGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~--~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~  161 (281)
                      |+||||+.++++++++.+++||+||.|+|+++....  ..++||+........+..||+|.|.++..|.....+|.||+.
T Consensus        82 v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~  161 (356)
T 1gp6_A           82 LINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT  161 (356)
T ss_dssp             EESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCS
T ss_pred             EeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCc
Confidence            999999999999999999999999999999998754  368999876655556788999999998776544568999999


Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHhh---cccccceeeeeCCCCCCCCccccccccccCceEEE
Q 023533          162 PLPLRDTLEAWSAELGNLSQKLLHQMAKALGIDANDVKALFE---EAMQTMRMNYYPPCPKPEQVIGFNSHSDASSITIL  238 (281)
Q Consensus       162 ~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL  238 (281)
                      +++||+.+++|+++|++++.+||++|+++||+++++|.+.+.   .+.+.||++|||||++++..+|+++|||+|+||||
T Consensus       162 ~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL  241 (356)
T 1gp6_A          162 PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI  241 (356)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEE
Confidence            999999999999999999999999999999999999999887   46789999999999998888999999999999999


Q ss_pred             eeCCCCCCceeeeCCeeEeccCCCCeEEEEhhhHHHHHhCCCC
Q 023533          239 LQLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVILCYFL  281 (281)
Q Consensus       239 ~q~~~~~GLqV~~~g~W~~V~p~pg~~vVniGD~l~~~TnG~l  281 (281)
                      +| ++++||||+++|+|++|+|+||++||||||+||+||||+|
T Consensus       242 ~q-d~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~  283 (356)
T 1gp6_A          242 LH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKY  283 (356)
T ss_dssp             EE-CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSS
T ss_pred             EE-cCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEe
Confidence            99 7799999999999999999999999999999999999986
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 281
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 2e-46
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 3e-43
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 2e-40
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 7e-25
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  157 bits (396), Expect = 2e-46
 Identities = 77/277 (27%), Positives = 145/277 (52%), Gaps = 16/277 (5%)

Query: 14  VPLIQELAKNTPTIVPSRFTVNDEDHVPLIS-------SSEQVLIPVIDMQKLLSGDFMD 66
           V  ++ LAK+    +P  + +  ++ +  I+         +   +P ID++ + S D   
Sbjct: 3   VERVESLAKSGIISIPKEY-IRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKI 61

Query: 67  SE--LGKLDHACREWGFFQLVNHGVSSSLVEKVKVEIQEFFNLPMKEKEKFWMRP--GET 122
            E  + +L  A  +WG   L+NHG+ + L+E+VK   +EFF+L ++EKEK+      G+ 
Sbjct: 62  RENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKI 121

Query: 123 EGFGQNFVVSEEQRLDWAYGFTMFTLPTYLRKPHLFPKLPLPLRDTLEAWSAELGNLSQK 182
           +G+G     +   +L+W   F     P   R   ++PK P    +    ++  L  L+ K
Sbjct: 122 QGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATK 181

Query: 183 LLHQMAKALGIDANDVKALF---EEAMQTMRMNYYPPCPKPEQVIGFNSHSDASSITILL 239
           +   ++  LG++ + ++      EE +  M++NYYP CP+PE  +G  +H+D S++T  +
Sbjct: 182 VFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALT-FI 240

Query: 240 QLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVI 276
             N   GLQ+  +G WV    +PD+ ++++GD LE++
Sbjct: 241 LHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEIL 277
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query281
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.4e-65  Score=465.32  Aligned_cols=267  Identities=29%  Similarity=0.571  Sum_probs=232.0

Q ss_pred             ccccHHHHHHcCCCCCCCCCccCCCCCCCCcCC-------CCCCCcCeEecCCCCCCCcchH--HHHHHHHHhhhccEEE
Q 023533           13 VVPLIQELAKNTPTIVPSRFTVNDEDHVPLISS-------SEQVLIPVIDMQKLLSGDFMDS--ELGKLDHACREWGFFQ   83 (281)
Q Consensus        13 ~~~~v~~~~~~~~~~~p~~y~~p~~~~~~~~~~-------~~~~~iPvIDls~l~~~~~~~~--~~~~l~~A~~~~Gff~   83 (281)
                      +|.+|++|++||+++||++|++|+.+++. ...       .+..+||||||+.+.++++..+  .+++|.+||+++||||
T Consensus         2 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~   80 (349)
T d1gp6a_           2 AVERVESLAKSGIISIPKEYIRPKEELES-INDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMH   80 (349)
T ss_dssp             CCCCHHHHHHTTCSSCCGGGSCCHHHHTT-CCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEE
T ss_pred             CCcchHHHHhCCCccCCHhhcCChhhcCC-CCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEE
Confidence            57899999999999999999999999886 322       2477899999999988776432  4589999999999999


Q ss_pred             EEcCCCChHHHHHHHHHHHHHhCCCHHHHhhcccCC--CCcccccccccccccccCCccccccccccCCCCCCCCCCCCC
Q 023533           84 LVNHGVSSSLVEKVKVEIQEFFNLPMKEKEKFWMRP--GETEGFGQNFVVSEEQRLDWAYGFTMFTLPTYLRKPHLFPKL  161 (281)
Q Consensus        84 l~nhGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~--~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~  161 (281)
                      |+||||+.++++++++++++||+||.|+|+||....  +.+.||+...........+|.+.+.....+.....+|.||+.
T Consensus        81 l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~  160 (349)
T d1gp6a_          81 LINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT  160 (349)
T ss_dssp             EESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCS
T ss_pred             EEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccc
Confidence            999999999999999999999999999999997643  345566554444445556676665544444445678999999


Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHhh---cccccceeeeeCCCCCCCCccccccccccCceEEE
Q 023533          162 PLPLRDTLEAWSAELGNLSQKLLHQMAKALGIDANDVKALFE---EAMQTMRMNYYPPCPKPEQVIGFNSHSDASSITIL  238 (281)
Q Consensus       162 ~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL  238 (281)
                      ++.|++.+++|+++|.+++.+|+++++++||+++++|.+.+.   ...+.||++|||+++.+...+|+++|||+|+||||
T Consensus       161 ~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL  240 (349)
T d1gp6a_         161 PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI  240 (349)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred             cchHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEE
Confidence            999999999999999999999999999999999999998764   34678999999999988889999999999999999


Q ss_pred             eeCCCCCCceeeeCCeeEeccCCCCeEEEEhhhHHHHHhCCCC
Q 023533          239 LQLNETVGLQIKKDGMWVPVIPLPDAFIINVGDILEVILCYFL  281 (281)
Q Consensus       239 ~q~~~~~GLqV~~~g~W~~V~p~pg~~vVniGD~l~~~TnG~l  281 (281)
                      +| +.++||||+.+|+|++|+|.+|++|||+||+||+||||+|
T Consensus       241 ~q-~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~  282 (349)
T d1gp6a_         241 LH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKY  282 (349)
T ss_dssp             EE-CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSS
T ss_pred             ec-cCCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCc
Confidence            99 7899999999999999999999999999999999999986
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure