Citrus Sinensis ID: 023571

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Protein Sequence
METILTTTASKLTIFHSISSTKLNSFSRKFSVGFSGNKNRKKVTTLKQGSFSYLPLGVQASASQAAASSTEAEPTKVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPIP
Secondary Structure (PSIPRED)
cccEEEcccccccccccccccccccEEEEEEEccccccccccccccccccEEccccccccEEEEEEEEccccccccccccHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHccccEEEEcccccccccccccccccccEEEEEcccccHHHHHHccccEEEEccccccccccccccEEEEccccHHHHHHHHccccEEEEEccccccccEEEEEcccHHHHHHHHHHHHccccEEEccccccccHHHHHHHHHHHHHccccccEEEEEcc
Secondary Structure Prediction (SSPRO)
ccHHHHcccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccEEEEEccccccccEEEEccccccccEEHEEEEcccccHHHHccccccHHHHHHHHHHHHccccEEEEccccccccEHHHHHHHcccEEEEEccHHHHHHHHHccccEEEEcccccHHHHHccccEEEEccccHHHHHHEEccccEEEEEEccccccHEEEEEcccHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHccccccEEEEEEcc
Coil and Loop (DISEMBL)
metiltttASKLTIFHSIsstklnsfsrkfsvgfsgnknrkkvttlkqgsfsylplgvqasasqaaassteaeptkvgtvpseMKAWLYgeyggvdvlkfdekvtvpqvkedQVLIKVVAAAlnpvdgkrrqgkfkatdsplptvpgydvaatsstrNLEFLKSLGADLAIdytkdnfedlpekFDVVYDAIGQCDRAVKAIKEGGTVValtgavtppgfrfvvTSNGevlkklnpylesgkvkpiidpkgpfpfsQVVEAFSYIEtnkatgkvvihpip
Flexible Loop (DISEMBL)
metiltttaskltifhsisstklnsfsrkfsvgfsgnknrkkvTTLKQGSFSYLPLGVQASASQAAAssteaeptkvgtvpSEMKAWLYGEYGGVDVLKFDEKVTVpqvkedqvLIKVVAAalnpvdgkrrqgkfkatdsplptvpgYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVValtgavtppgfrfvVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIetnkatgkvvihpip
Low Complexity Region (SEG)
METILTTTASKLTIFHSISSTKLNSFSRKFSVGFSGNKNRKKVTTLKQGSFSYLPLGVqasasqaaassTEAEPTKVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPIP
Disordered region (IsUnstruct)
*********SKLTIFHSISSTKL**F***FSV******************FSYL*****************************MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPV********************GYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI****
Disordered Region (DISOPRED)
***ILTTTASKLTIFHSI*STKLNSFSRKFSVGFSGNKNRKKVTTLKQGSFSYLPLGVQASASQAAASSTEAEPTKVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPIP
Disordered Region (DISEMBL)
METILTTTASKLTIFHSISSTKLNSFSRKFSVGFSGNKNRKKVTTLKQGSFSYLPLGV********************TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPIP
Disordered Region (DISPRO)
**********KLTIFHSISSTKLNSFSRKFSVGFSGNKNRKKVTTLKQGSFSYLPLGVQASASQAAASSTEAEPTKVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPIP
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
METILTTTASKLTIFHSISSTKLNSFSRKFSVGFSGNKNRKKVTTLKQGSFSYLPLGVQASASQAAASSTEAEPTKVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPIP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	280	2.2.26 [Sep-21-2011]
Q9ZUC1	386	Quinone oxidoreductase-li	yes	no	0.467	0.339	0.801	3e-59
Q28452	330	Quinone oxidoreductase OS	N/A	no	0.242	0.206	0.463	4e-07
O97764	330	Zeta-crystallin OS=Bos ta	yes	no	0.242	0.206	0.463	1e-06
Q9SV68	329	Putative quinone-oxidored	no	no	0.439	0.373	0.296	2e-06
P11415	329	Quinone oxidoreductase OS	yes	no	0.275	0.234	0.409	3e-06
O42909	347	Zinc-type alcohol dehydro	yes	no	0.45	0.363	0.264	6e-06
Q6AYT0	329	Quinone oxidoreductase OS	yes	no	0.242	0.206	0.434	7e-06
Q8H0M1	329	Quinone-oxidoreductase ho	N/A	no	0.239	0.203	0.457	7e-06
P47199	331	Quinone oxidoreductase OS	yes	no	0.242	0.205	0.434	1e-05
Q08257	329	Quinone oxidoreductase OS	no	no	0.242	0.206	0.434	1e-05

>sp|Q9ZUC1|QORL_ARATH Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2

 Score =  228 bits (582), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 105/131 (80%), Positives = 122/131 (93%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVV 209
           VAAT+ST  LE ++SLGADLAIDYTK+N EDLP+K+DVV+DAIG CD+AVK IKEGG VV
Sbjct: 256 VAATASTEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGMCDKAVKVIKEGGKVV 315

Query: 210 ALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK 269
           ALTGAVTPPGFRFVVTSNG+VLKKLNPY+ESGKVKP++DPKGPFPFS+V +AFSY+ETN 
Sbjct: 316 ALTGAVTPPGFRFVVTSNGDVLKKLNPYIESGKVKPVVDPKGPFPFSRVADAFSYLETNH 375

Query: 270 ATGKVVIHPIP 280
           ATGKVV++PIP
Sbjct: 376 ATGKVVVYPIP 386

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|Q28452|QOR_LAMGU Quinone oxidoreductase OS=Lama guanicoe GN=CRYZ PE=2 SV=1

 Score = 55.5 bits (132), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           M+A    E+GG +VLK    V VP  +E QVLIKV A  +NPVD   R G + +    LP
Sbjct: 8   MRAIRVSEFGGPEVLKLQSDVAVPIPEEHQVLIKVQACGVNPVDTYIRSGTY-SRKPRLP 66

Query: 144 TVPGYDVAA 152
             PG DVA 
Sbjct: 67  YTPGLDVAG 75

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Lama guanicoe (taxid: 9840)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|O97764|QOR_BOVIN Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2

 Score = 54.3 bits (129), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           M+A    E+GG +VLK    V VP  K+ QVLIKV A  +NPVD   R G        LP
Sbjct: 8   MRAIRVFEFGGPEVLKLQSDVAVPIPKDHQVLIKVQACGVNPVDTYIRSGTHN-IKPLLP 66

Query: 144 TVPGYDVAA 152
             PG+DVA 
Sbjct: 67  YTPGFDVAG 75

Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding (By similarity). Has minimal or no quinone reductase activity. Binds strongly to single-stranded DNA.

Bos taurus (taxid: 9913)

>sp|Q9SV68|QORH_ARATH Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 32/155 (20%)

Query: 149 DVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAV------KAI 202
            V AT   RN+EF+KSLGAD  +DY       L       YDA+  C   +        +
Sbjct: 182 HVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIPFSVFEPNL 241

Query: 203 KEGGTVVALTGAVTPPG----FRFVVTSNGEVLKKLNPYL---------------ESGKV 243
            E G V+ +T     PG    + + V       K+L P L               + GKV
Sbjct: 242 SENGKVIDIT-----PGPNAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEGKV 296

Query: 244 KPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
           K +ID K   P S+  +A++      ATGK+++ P
Sbjct: 297 KTVIDSK--HPLSKAEDAWAKSIDGHATGKIIVEP 329

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P11415|QOR_CAVPO Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1

 Score = 52.4 bits (124), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 11/88 (12%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSP-L 142
           M+A    E+GG +VLK    V VP  K+ QVLIKV A  +NPV+   R G +  T  P L
Sbjct: 8   MRAIRVFEFGGPEVLKVQSDVAVPIPKDHQVLIKVHACGINPVETYIRSGTY--TRIPLL 65

Query: 143 PTVPGYDVAATSSTRNLEFLKSLGADLA 170
           P  PG DVA          ++S+G D++
Sbjct: 66  PYTPGTDVAGV--------VESIGNDVS 85

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Cavia porcellus (taxid: 10141)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|O42909|YBI2_SCHPO Zinc-type alcohol dehydrogenase-like protein C16A3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16A3.02c PE=3 SV=1

 Score = 51.6 bits (122), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 29/155 (18%)

Query: 149 DVAATSSTRNLEFLKSLGADLAIDYTKDNF-EDLPEK--FDVVYDAIGQ---CDRAVKAI 202
           +V   SST NL+  KSLGA   +DY KDN  E L +   +D V+D +        + K +
Sbjct: 192 EVTTISSTENLDLCKSLGATHTLDYKKDNLVERLADLGPYDFVFDCVNDNVLYRASSKFV 251

Query: 203 KEGGTVVALTGAVT---------------------PPGFRFVVTSNGEVLKKLNPYLESG 241
           K  G    + G +T                        +  ++  + E+L+    ++   
Sbjct: 252 KPDGAFFGIGGDITLSYVGSRLSRTLRPRVLGGSSHSYYNILLHVDQEMLRDFVDFVMKH 311

Query: 242 KVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
            +K +ID    + F   VEAF+ + T++  GKV+I
Sbjct: 312 NIKTVIDS--VYDFEDTVEAFNRLMTHRCKGKVII 344

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6AYT0|QOR_RAT Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1

 Score = 51.6 bits (122), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           M+A    E+GG +VLK    V VP  +  QVLIKV A  +NPV+   R G + +    LP
Sbjct: 8   MRAIRVFEFGGPEVLKLQSDVVVPAPQSHQVLIKVHACGVNPVETYIRSGTY-SRKPALP 66

Query: 144 TVPGYDVAA 152
             PG DVA 
Sbjct: 67  YTPGSDVAG 75

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q8H0M1|QORH_SPIOL Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1

 Score = 51.6 bits (122), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 3/70 (4%)

Query: 84  MKAWLYGEYGG-VDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFK-ATDSP 141
           M A  Y  YGG  D LK  E V VP  K D++L+K+ AA LNP+D K ++G  +      
Sbjct: 6   MHAIQYSGYGGGTDALKHVE-VAVPDPKSDELLLKIEAATLNPIDWKIQKGVLRPLLPRK 64

Query: 142 LPTVPGYDVA 151
            PT+PG DVA
Sbjct: 65  FPTIPGTDVA 74

Spinacia oleracea (taxid: 3562)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P47199|QOR_MOUSE Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=2 SV=1

 Score = 50.4 bits (119), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           M+A    E+GG +VLK    V VP  +  QVLIKV A  +NPV+   R G + +    LP
Sbjct: 8   MRAIRVFEFGGPEVLKLQSDVVVPVPQSHQVLIKVHACGVNPVETYIRSGAY-SRKPALP 66

Query: 144 TVPGYDVAA 152
             PG DVA 
Sbjct: 67  YTPGSDVAG 75

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q08257|QOR_HUMAN Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1

 Score = 50.4 bits (119), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           M+A    E+GG +VLK    + VP  K+ QVLIKV A  +NPV+   R G + +    LP
Sbjct: 8   MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTY-SRKPLLP 66

Query: 144 TVPGYDVAA 152
             PG DVA 
Sbjct: 67  YTPGSDVAG 75

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species. Enhances the stability of mRNA coding for BCL2. NADPH binding interferes with mRNA binding.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
255568816	389	alcohol dehydrogenase, putative [Ricinus	0.442	0.318	0.923	5e-66
356526809	397	PREDICTED: quinone oxidoreductase-like p	0.45	0.317	0.893	4e-64
356567630	395	PREDICTED: quinone oxidoreductase-like p	0.45	0.318	0.885	2e-63
388495252	387	unknown [Lotus japonicus]	0.442	0.320	0.885	4e-63
359473178	377	PREDICTED: quinone oxidoreductase-like p	0.414	0.307	0.870	5e-62
297739033	309	unnamed protein product [Vitis vinifera]	0.467	0.423	0.870	8e-62
307135978	383	alcohol dehydrogenase [Cucumis melo subs	0.428	0.313	0.862	2e-61
118488941	383	unknown [Populus trichocarpa x Populus d	0.421	0.308	0.854	3e-61
224140597	309	predicted protein [Populus trichocarpa]	0.467	0.423	0.854	5e-61
449434925	383	PREDICTED: quinone oxidoreductase-like p	0.428	0.313	0.854	2e-60

>gi|255568816|ref|XP_002525379.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223535342|gb|EEF37017.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  257 bits (656), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 121/131 (92%), Positives = 128/131 (97%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVV 209
           VAATS TRNLE LKSLGADLAIDYTK+NFEDLPEKFDVVYDAIGQCDRAVKA+KEGG+VV
Sbjct: 259 VAATSGTRNLEILKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAVKEGGSVV 318

Query: 210 ALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK 269
           ALTGAVTPPGFRFVVTSNG+VLKKLNPYLESGKVKP+IDPKGPFPFSQV EAFSYIETN+
Sbjct: 319 ALTGAVTPPGFRFVVTSNGDVLKKLNPYLESGKVKPVIDPKGPFPFSQVAEAFSYIETNR 378

Query: 270 ATGKVVIHPIP 280
           ATGK+VIHPIP
Sbjct: 379 ATGKIVIHPIP 389

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526809|ref|XP_003532009.1| PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Glycine max]

 Score =  250 bits (639), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 117/131 (89%), Positives = 127/131 (96%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVV 209
           VAATSSTRNL+ LKSLGADLAIDYTK+NFEDLPEKFDVVYDAIGQCDRAVKA+KE G+VV
Sbjct: 267 VAATSSTRNLDLLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAVKEDGSVV 326

Query: 210 ALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK 269
           ALTGAVTPPGFRFVVTSNGEVL+KLNPYLESGKVKPI+DPKGPFPF ++ EAFSY+ETN+
Sbjct: 327 ALTGAVTPPGFRFVVTSNGEVLRKLNPYLESGKVKPIVDPKGPFPFDKLAEAFSYLETNR 386

Query: 270 ATGKVVIHPIP 280
           ATGKVVIHPIP
Sbjct: 387 ATGKVVIHPIP 397

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567630|ref|XP_003552020.1| PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Glycine max]

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 116/131 (88%), Positives = 126/131 (96%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVV 209
           VAATSSTRNL+ LKSLGADLAIDYTK+NFEDLPEKFDVVYDAIGQCDRAVKA+KEGG+VV
Sbjct: 265 VAATSSTRNLDLLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAVKEGGSVV 324

Query: 210 ALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK 269
           ALTGAVTPPGFRFVVTSNG VL+KLNPYLESGKVKPI+DPKGPF F ++ EAFSY+ETN+
Sbjct: 325 ALTGAVTPPGFRFVVTSNGAVLRKLNPYLESGKVKPIVDPKGPFSFDKLAEAFSYLETNR 384

Query: 270 ATGKVVIHPIP 280
           ATGKVVIHPIP
Sbjct: 385 ATGKVVIHPIP 395

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388495252|gb|AFK35692.1| unknown [Lotus japonicus]

 Score =  247 bits (630), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 116/131 (88%), Positives = 124/131 (94%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVV 209
           VAAT  TRNLE LKSLG DLAIDYTK+NFEDLPEKFDVVYDAIGQCDRAVKAIKEGG+VV
Sbjct: 257 VAATPGTRNLELLKSLGVDLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAIKEGGSVV 316

Query: 210 ALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK 269
           ALTGAVTPPGFRFVVTSNG VL+KLNPYLESGKVKPI+D KGPFPF+Q+ EAFSY+ETN+
Sbjct: 317 ALTGAVTPPGFRFVVTSNGTVLRKLNPYLESGKVKPIVDSKGPFPFTQLAEAFSYLETNR 376

Query: 270 ATGKVVIHPIP 280
           ATGKVVIHPIP
Sbjct: 377 ATGKVVIHPIP 387

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473178|ref|XP_003631255.1| PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Vitis vinifera]

 Score =  243 bits (621), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 114/131 (87%), Positives = 125/131 (95%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVV 209
           VAATSST  LE LKSLGADL IDYTK+NFEDL EKFDVVYDA+GQCD+AVK +KEGG+VV
Sbjct: 247 VAATSSTAKLELLKSLGADLTIDYTKENFEDLAEKFDVVYDAVGQCDKAVKVVKEGGSVV 306

Query: 210 ALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK 269
           ALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKP++DPKGPFPFSQVVEAFSY+ET++
Sbjct: 307 ALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPVVDPKGPFPFSQVVEAFSYVETSR 366

Query: 270 ATGKVVIHPIP 280
           ATGK+VIHPIP
Sbjct: 367 ATGKIVIHPIP 377

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739033|emb|CBI28522.3| unnamed protein product [Vitis vinifera]

 Score =  243 bits (619), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 114/131 (87%), Positives = 125/131 (95%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVV 209
           VAATSST  LE LKSLGADL IDYTK+NFEDL EKFDVVYDA+GQCD+AVK +KEGG+VV
Sbjct: 179 VAATSSTAKLELLKSLGADLTIDYTKENFEDLAEKFDVVYDAVGQCDKAVKVVKEGGSVV 238

Query: 210 ALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK 269
           ALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKP++DPKGPFPFSQVVEAFSY+ET++
Sbjct: 239 ALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPVVDPKGPFPFSQVVEAFSYVETSR 298

Query: 270 ATGKVVIHPIP 280
           ATGK+VIHPIP
Sbjct: 299 ATGKIVIHPIP 309

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307135978|gb|ADN33837.1| alcohol dehydrogenase [Cucumis melo subsp. melo]

 Score =  241 bits (615), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 113/131 (86%), Positives = 125/131 (95%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVV 209
           VAAT+ST  LEFLKSLG DLAIDYTK+N EDLPEKFDVVYDAIGQCD+AVK +KEGG+VV
Sbjct: 253 VAATASTGKLEFLKSLGVDLAIDYTKENIEDLPEKFDVVYDAIGQCDKAVKVVKEGGSVV 312

Query: 210 ALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK 269
           ALTGAVTPPGFRFVVTS+G VLKKLNPYLESGKVKPI+DPKGPFPFSQVVEAF+Y+E+++
Sbjct: 313 ALTGAVTPPGFRFVVTSDGAVLKKLNPYLESGKVKPIVDPKGPFPFSQVVEAFAYVESSR 372

Query: 270 ATGKVVIHPIP 280
           ATGKVVIHPIP
Sbjct: 373 ATGKVVIHPIP 383

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488941|gb|ABK96279.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  241 bits (614), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 112/131 (85%), Positives = 122/131 (93%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVV 209
           +AATSST  LE LKSLGADLAIDYTK+NFEDLPEKFDVVYDAIGQCD+AVK +KEGG+VV
Sbjct: 253 IAATSSTGKLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDKAVKVVKEGGSVV 312

Query: 210 ALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK 269
           ALTGAVTPPGFRFVVTSNG  LK LNPYLESGK+KP++DPKGPF FSQV EAFSYIETN+
Sbjct: 313 ALTGAVTPPGFRFVVTSNGNTLKTLNPYLESGKIKPVVDPKGPFTFSQVAEAFSYIETNR 372

Query: 270 ATGKVVIHPIP 280
           ATGK+VIHPIP
Sbjct: 373 ATGKIVIHPIP 383

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140597|ref|XP_002323668.1| predicted protein [Populus trichocarpa] gi|222868298|gb|EEF05429.1| predicted protein [Populus trichocarpa]

 Score =  240 bits (612), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 112/131 (85%), Positives = 122/131 (93%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVV 209
           +AATSST  LE LKSLGADLAIDYTK+NFEDLPEKFDVVYDAIGQCD+AVK +KEGG+VV
Sbjct: 179 IAATSSTGKLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDKAVKVVKEGGSVV 238

Query: 210 ALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK 269
           ALTGAVTPPGFRFVVTSNG  LK LNPYLESGK+KP++DPKGPF FSQV EAFSYIETN+
Sbjct: 239 ALTGAVTPPGFRFVVTSNGNTLKTLNPYLESGKIKPVVDPKGPFTFSQVAEAFSYIETNR 298

Query: 270 ATGKVVIHPIP 280
           ATGK+VIHPIP
Sbjct: 299 ATGKIVIHPIP 309

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434925|ref|XP_004135246.1| PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Cucumis sativus]

 Score =  238 bits (608), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 112/131 (85%), Positives = 124/131 (94%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVV 209
           VAAT+ST  LEFLKSLG DLAIDYTK+N EDLPEKFDVVYDAIGQCD+AVK +KEGG+VV
Sbjct: 253 VAATASTGKLEFLKSLGVDLAIDYTKENIEDLPEKFDVVYDAIGQCDKAVKVVKEGGSVV 312

Query: 210 ALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK 269
           ALTGAVTPPGFRFVVTS+G VLKKLNPYLESGKVKPI+DPKGPF FSQVVEAF+Y+E+++
Sbjct: 313 ALTGAVTPPGFRFVVTSDGAVLKKLNPYLESGKVKPIVDPKGPFSFSQVVEAFAYVESSR 372

Query: 270 ATGKVVIHPIP 280
           ATGKVVIHPIP
Sbjct: 373 ATGKVVIHPIP 383

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
TAIR|locus:2034802	386	AOR "alkenal/one oxidoreductas	0.467	0.339	0.801	9.1e-88
TIGR_CMR|BA_3566	332	BA_3566 "alcohol dehydrogenase	0.278	0.234	0.349	7.6e-21
TIGR_CMR|BA_3438	335	BA_3438 "alcohol dehydrogenase	0.171	0.143	0.448	7.7e-17
UNIPROTKB|Q0VC50	396	RTN4IP1 "Reticulon-4-interacti	0.192	0.136	0.392	1.2e-13
TIGR_CMR|BA_0176	302	BA_0176 "alcohol dehydrogenase	0.428	0.397	0.310	3.7e-13
UNIPROTKB|F1RT47	396	LOC100627610 "Uncharacterized	0.192	0.136	0.392	1.4e-12
UNIPROTKB|G5EH83	339	MGCH7_ch7g170 "Uncharacterized	0.275	0.227	0.318	9.6e-12
TAIR|locus:2123206	329	AT4G13010 [Arabidopsis thalian	0.242	0.206	0.362	9.9e-12
POMBASE|SPBC16A3.02c	347	SPBC16A3.02c "mitochondrial co	0.242	0.195	0.378	1.2e-11
TIGR_CMR|CBU_1023	318	CBU_1023 "alcohol dehydrogenas	0.235	0.207	0.442	1.6e-11

TAIR|locus:2034802 AOR "alkenal/one oxidoreductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 574 (207.1 bits), Expect = 9.1e-88, Sum P(2) = 9.1e-88
 Identities = 105/131 (80%), Positives = 122/131 (93%)

Query:   150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGTVV 209
             VAAT+ST  LE ++SLGADLAIDYTK+N EDLP+K+DVV+DAIG CD+AVK IKEGG VV
Sbjct:   256 VAATASTEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGMCDKAVKVIKEGGKVV 315

Query:   210 ALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK 269
             ALTGAVTPPGFRFVVTSNG+VLKKLNPY+ESGKVKP++DPKGPFPFS+V +AFSY+ETN 
Sbjct:   316 ALTGAVTPPGFRFVVTSNGDVLKKLNPYIESGKVKPVVDPKGPFPFSRVADAFSYLETNH 375

Query:   270 ATGKVVIHPIP 280
             ATGKVV++PIP
Sbjct:   376 ATGKVVVYPIP 386

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0010319 "stromule" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0035671 "enone reductase activity" evidence=IDA

GO:0035798 "2-alkenal reductase (NADP+) activity" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009416 "response to light stimulus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

GO:0015994 "chlorophyll metabolic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019216 "regulation of lipid metabolic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0031408 "oxylipin biosynthetic process" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

TIGR_CMR|BA_3566 BA_3566 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 128 (50.1 bits), Expect = 7.6e-21, Sum P(3) = 7.6e-21
 Identities = 29/83 (34%), Positives = 47/83 (56%)

Query:   142 LPTVPGYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG--QCDRAV 199
             L  + G  V  T+S    + +KSLGAD  I+Y  + FE++ + +D V+D IG    +++ 
Sbjct:   163 LAKIMGATVTTTASEAGPDLVKSLGADQIINYKTEKFEEILKDYDAVFDTIGGTTLEKSF 222

Query:   200 KAIKEGGTVVALTGAVTPPGFRF 222
               IK GG +V+++G    P  RF
Sbjct:   223 DIIKSGGNIVSVSGI---PNARF 242

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

TIGR_CMR|BA_3438 BA_3438 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 125 (49.1 bits), Expect = 7.7e-17, Sum P(3) = 7.7e-17
 Identities = 22/49 (44%), Positives = 35/49 (71%)

Query:   228 GEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
             GE+L K+   +E GK++P++D K  F F +V +A  Y+E+NKA GK+V+
Sbjct:   284 GEILTKITKIVEEGKLRPLLDSKS-FTFDEVAQAHEYLESNKAIGKIVL 331

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

UNIPROTKB|Q0VC50 RTN4IP1 "Reticulon-4-interacting protein 1, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 110 (43.8 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
 Identities = 22/56 (39%), Positives = 37/56 (66%)

Query:    84 MKAWLYGEYGGVDVLKFDEKVTVPQVK-EDQVLIKVVAAALNPVDGKRRQGKFKAT 138
             M AW+  +YG  +VL+F + + +P +   ++V+IKV AA++NP+D   R G + AT
Sbjct:    43 MPAWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSG-YGAT 97

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

TIGR_CMR|BA_0176 BA_0176 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 164 (62.8 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
 Identities = 41/132 (31%), Positives = 70/132 (53%)

Query:   147 GYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAV--KAIKE 204
             G  V A  S  N E ++SLGAD  IDYTK++F    E++D+++DA+G+  +++  + +  
Sbjct:   178 GATVTAVCSNSNFELVQSLGADKVIDYTKEDFTKRRERYDIIFDAVGKHKKSLCKQVLAP 237

Query:   205 GGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSY 264
              G  V++ G +       ++     +LKKL    E+  +KP+ID    +   ++ EA  Y
Sbjct:   238 NGKYVSVNGMMAKVSKEDMI-----LLKKLT---ETEHLKPVIDRT--YRLEEIAEAHMY 287

Query:   265 IETNKATGKVVI 276
             +E     G V I
Sbjct:   288 VEIGHKKGNVSI 299

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

UNIPROTKB|F1RT47 LOC100627610 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 107 (42.7 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
 Identities = 22/56 (39%), Positives = 37/56 (66%)

Query:    84 MKAWLYGEYGGVDVLKFDEKVTVPQVK-EDQVLIKVVAAALNPVDGKRRQGKFKAT 138
             M AW+  +YG  +VL+F + + +P +   ++V+IKV AA++NP+D   R G + AT
Sbjct:    43 MPAWVIDKYGNNEVLRFTQNMMLPMIHYPNEVVIKVHAASINPIDVNMRSG-YGAT 97

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|G5EH83 MGCH7_ch7g170 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 105 (42.0 bits), Expect = 9.6e-12, Sum P(3) = 9.6e-12
 Identities = 28/88 (31%), Positives = 45/88 (51%)

Query:   198 AVKAIKEGGTVVALTGAVTPPGF--------RFVVTSNGEV-LKKLNPYLESGKVKPIID 248
             AV        V ++   +  PGF         F +TSN    L +++ +L +GK+K +  
Sbjct:   252 AVGGAANSAVVTSMVKGLMLPGFLGGGKRKMEFYMTSNNHNDLSRVSEWLANGKIKTVTH 311

Query:   249 PKGPFPFSQVVEAFSYIETNKATGKVVI 276
                 FPF QV EAF+ ++T +A GK++I
Sbjct:   312 KT--FPFEQVKEAFAELKTGRAAGKIII 337

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0043581 "mycelium development" evidence=IEP

TAIR|locus:2123206 AT4G13010 [Arabidopsis thaliana (taxid:3702)]

 Score = 97 (39.2 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
 Identities = 25/69 (36%), Positives = 35/69 (50%)

Query:    84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA-TDSPL 142
             M A  Y  YGG        +V VP  K ++V +K+ A +LNPVD K ++G  +       
Sbjct:     6 MHALQYNSYGGGAAGLEHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPRKF 65

Query:   143 PTVPGYDVA 151
             P +P  DVA
Sbjct:    66 PCIPATDVA 74

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0005794 "Golgi apparatus" evidence=RCA

POMBASE|SPBC16A3.02c SPBC16A3.02c "mitochondrial conserved protein (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 98 (39.6 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
 Identities = 28/74 (37%), Positives = 38/74 (51%)

Query:   149 DVAATSSTRNLEFLKSLGADLAIDYTKDNF-EDLPE--KFDVVYDAIGQ--CDRAV-KAI 202
             +V   SST NL+  KSLGA   +DY KDN  E L +   +D V+D +      RA  K +
Sbjct:   192 EVTTISSTENLDLCKSLGATHTLDYKKDNLVERLADLGPYDFVFDCVNDNVLYRASSKFV 251

Query:   203 KEGGTVVALTGAVT 216
             K  G    + G +T
Sbjct:   252 KPDGAFFGIGGDIT 265

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISM

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0033554 "cellular response to stress" evidence=IEP

TIGR_CMR|CBU_1023 CBU_1023 "alcohol dehydrogenase, zinc-containing" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 118 (46.6 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 31/70 (44%), Positives = 44/70 (62%)

Query:    83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGK-F--KATD 139
             EMKA  + ++G   VLK  +  T P+ +++Q+LIKV AA+LNP+D K R G  F  K   
Sbjct:     3 EMKAIQFDQFGPPKVLKLVDTPT-PEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLK 61

Query:   140 SPLPTVPGYD 149
             + LP+  GYD
Sbjct:    62 NNLPSGLGYD 71

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZUC1	QORL_ARATH	1, ., -, ., -, ., -	0.8015	0.4678	0.3393	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	280
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	1e-32
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	2e-30
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	4e-23
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	1e-22
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	9e-19
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	1e-18
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	3e-17
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	8e-15
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	3e-14
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	4e-14
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	5e-14
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	1e-13
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	4e-13
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	1e-12
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	2e-12
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	6e-12
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	1e-11
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	3e-11
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	1e-10
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	3e-10
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	3e-10
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	4e-10
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	7e-10
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	7e-10
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	1e-09
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	1e-09
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	1e-09
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	2e-09
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-09
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	6e-09
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	6e-09
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	9e-09
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	1e-08
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	3e-08
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	4e-08
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	4e-08
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	7e-08
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	1e-07
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	2e-07
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	2e-07
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	3e-07
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	3e-07
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	4e-07
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	4e-07
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	7e-07
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	8e-07
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	1e-06
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	3e-06
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	4e-06
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	7e-06
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	8e-06
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	1e-05
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	3e-05
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	4e-05
smart00829	287	smart00829, PKS_ER, Enoylreductase	4e-05
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	5e-05
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	6e-05
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	6e-05
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	7e-05
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	8e-05
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	1e-04
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	6e-04
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	7e-04
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	9e-04
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	0.001
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	0.001
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	0.001
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	0.002
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	0.002
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	0.002
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	0.003

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  121 bits (305), Expect = 1e-32
 Identities = 51/143 (35%), Positives = 73/143 (51%), Gaps = 15/143 (10%)

Query: 147 GYDVAATSSTRNLEFLKSLGADLAIDYTKDNFE--DLPEKFDVVYDAIGQ--CDRAVKAI 202
           G  V AT+S  N +FL+SLGAD  IDYTK +FE    P   D V D +G     R++  +
Sbjct: 169 GARVIATASAANADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGETLARSLALV 228

Query: 203 KEGGTVVALTGAVTPP---------GFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPF 253
           K GG +V++ G                   V  +GE L +L   +E+GK++P++D    F
Sbjct: 229 KPGGRLVSIAGPPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVD--RVF 286

Query: 254 PFSQVVEAFSYIETNKATGKVVI 276
           P     EA   +E+  A GKVV+
Sbjct: 287 PLEDAAEAHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  115 bits (290), Expect = 2e-30
 Identities = 54/154 (35%), Positives = 78/154 (50%), Gaps = 26/154 (16%)

Query: 147 GYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDL---PEKFDVVYDAIGQCD----RAV 199
           G  V    STRN E ++SLGAD  IDYT ++F  L    EK+DV++DA+G       RA 
Sbjct: 168 GAHVTGVCSTRNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRAS 227

Query: 200 KAIKEGGTVVALTGAVTPPGFR-----------------FVVTSNGEVLKKLNPYLESGK 242
            A+K GG  V++ G  +                      F+   N E L++L   +E GK
Sbjct: 228 LALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGK 287

Query: 243 VKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
           +KP+ID    +P     EA+  +++ +A GKVVI
Sbjct: 288 LKPVID--SVYPLEDAPEAYRRLKSGRARGKVVI 319

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 96.1 bits (240), Expect = 4e-23
 Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 30/158 (18%)

Query: 147 GYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEK------FDVVYDAIG--QCDRA 198
           G  V AT+S+    F +SLGAD  I Y +    +   +      FDVV+D +G    D +
Sbjct: 169 GARVYATASSEKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDAS 227

Query: 199 VKAIKEGGTVVAL----TGAVTPPGFR-----FVVT-----------SNGEVLKKLNPYL 238
            +A+   G VV++    T  + P  FR      V T            +GE+L++    +
Sbjct: 228 FEAVALYGRVVSILGGATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLV 287

Query: 239 ESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
           E G+++P++DP+  FP  +   A + +E+  A GK+VI
Sbjct: 288 ERGQLRPLLDPR-TFPLEEAAAAHARLESGSARGKIVI 324

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 89.7 bits (223), Expect = 1e-22
 Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 21/131 (16%)

Query: 165 LGADLAIDYTKDNFEDL--PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVTPP-- 218
           LGAD  IDYT ++FE+    E  DVV D +G     RA+ A+K GG +V++ G       
Sbjct: 1   LGADEVIDYTTEDFEEATAGEGVDVVLDTVGGETLLRALLALKPGGRLVSIGGPDLLLSV 60

Query: 219 ----------GFRFVVTSNGEV---LKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYI 265
                     G      S GE    L +L   +E+GK++P+ID    FP  +  EA  Y+
Sbjct: 61  AAKAGGRGVRGVFLFPVSPGEAGADLAELAELVEAGKLRPVIDRV--FPLEEAAEAHRYL 118

Query: 266 ETNKATGKVVI 276
           E+ +A GKVV+
Sbjct: 119 ESGRARGKVVL 129

Length = 129

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 83.8 bits (208), Expect = 9e-19
 Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 2/69 (2%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFK-ATDSPL 142
           MKA    EYGG +VL+  + V  P+    +VL+KV AA +NPVD K R+G  K A    L
Sbjct: 1   MKAVRIHEYGGPEVLELAD-VPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTL 59

Query: 143 PTVPGYDVA 151
           P +PG+DVA
Sbjct: 60  PLIPGHDVA 68

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 83.8 bits (208), Expect = 1e-18
 Identities = 54/165 (32%), Positives = 74/165 (44%), Gaps = 37/165 (22%)

Query: 147 GYDVAATSSTRNLEFLKSLGADLAIDYTKDNFED---LPEKFDVVYDAIGQCDR--AVKA 201
           G  V  T ST  +  +KSLGAD  IDY  ++FE+      KFDV+ D +G      A+K 
Sbjct: 187 GAHVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDTVGGDTEKWALKL 246

Query: 202 IKEGGTVV------------------ALTGAVT------PPGFRFVVTS------NGEVL 231
           +K+GGT V                   L  AV           +           +G  L
Sbjct: 247 LKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSAL 306

Query: 232 KKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
            +L   +E GK+KP+ID    FPF +V EA+  +E+  A GK VI
Sbjct: 307 DELAKLVEDGKIKPVIDKV--FPFEEVPEAYEKVESGHARGKTVI 349

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 79.7 bits (197), Expect = 3e-17
 Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 31/158 (19%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFED------LPEKFDVVYDAIG--QCDRAVKA 201
           VA  SS+  LE LK LGAD  I+Y +++F +        +  DVV D +G      ++ A
Sbjct: 171 VAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAA 230

Query: 202 IKEGGTVVALTGAVTPPGFRFVVTS--------------------NGEVLKKLNPYLESG 241
           +  GG +V++      P     +                        E L +L   L SG
Sbjct: 231 LAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASG 290

Query: 242 KVKPIIDPKGPFPFSQVVEAF-SYIETNKATGKVVIHP 278
           K+KP+ID    +P ++   A    +   + TGKVV+  
Sbjct: 291 KLKPVIDRV--YPLAEAPAAAAHLLLERRTTGKVVLKV 326

Length = 326

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 73.1 bits (180), Expect = 8e-15
 Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 26/155 (16%)

Query: 147 GYDVAATSST-RNLEFLKSLGADLAIDYTKDNFEDLPEKF------DVVYDAIGQC--DR 197
           G  V AT+ +   LE  K LGAD  IDY K++F     +       DVV + +G    ++
Sbjct: 191 GATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDVVVEHVGAATWEK 250

Query: 198 AVKAIKEGGTVV---ALTGAVTPPGFRFVVT-----------SNGEVLKKLNPYLESGKV 243
           ++K++  GG +V   A TG   P   R V             +  E+ + L   +  GK+
Sbjct: 251 SLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALR-LVFRGKL 309

Query: 244 KPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
           KP+ID    FP  +  EA   +E+ +  GK+V+ P
Sbjct: 310 KPVIDSV--FPLEEAAEAHRRLESREQFGKIVLTP 342

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 71.0 bits (175), Expect = 3e-14
 Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 32/157 (20%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFED------LPEKFDVVYDAIGQ--CDRAVKA 201
           +AA SS   L   ++LGAD  IDY   +  +           DVVYD +G    + ++++
Sbjct: 168 IAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRS 227

Query: 202 IKEGGTVV----------------ALTGAVTPPGF------RFVVTSNGEVLKKLNPYLE 239
           +  GG ++                 L   ++  G       R         L +L   L 
Sbjct: 228 LAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLA 287

Query: 240 SGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
            GK++P +     FP  Q  EA   +   KATGKVV+
Sbjct: 288 EGKIRPHVSA--VFPLEQAAEALRALADRKATGKVVL 322

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 70.7 bits (174), Expect = 4e-14
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 2/68 (2%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           M+A  Y E+G  DVL+  + + VP     +VL++V A+ +NPVD   R G +     PLP
Sbjct: 1   MRAIRYHEFGAPDVLRLGD-LPVPTPGPGEVLVRVHASGVNPVDTYIRAGAY-PGLPPLP 58

Query: 144 TVPGYDVA 151
            VPG D A
Sbjct: 59  YVPGSDGA 66

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 70.5 bits (174), Expect = 5e-14
 Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 38/164 (23%)

Query: 147 GYDVAATSST-RNLEFLKSLGADLAIDYTKDNFEDLPEKF------DVVYDAIGQ--CDR 197
           G  V AT+ +   LE  ++LGAD+AI+Y  ++F +  ++       DV+ D +G     R
Sbjct: 164 GARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLAR 223

Query: 198 AVKAIKEGGTVV---ALTGAVT----------------------PPGFRFVVTSNGEVLK 232
            ++A+   G +V    L GA                            +  + +     +
Sbjct: 224 NLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAA--AFRE 281

Query: 233 KLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
            + P   SG+++P+ID    FP  +  EA   +E+N+  GK+V+
Sbjct: 282 HVWPLFASGRIRPVIDKV--FPLEEAAEAHRRMESNEHIGKIVL 323

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 69.7 bits (171), Expect = 1e-13
 Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 2/70 (2%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           MKA +  E+GG +VLK   +V  P+    +VL++V AA +NP+D   RQG       PLP
Sbjct: 1   MKAVVVEEFGGPEVLKV-VEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVR-PLP 58

Query: 144 TVPGYDVAAT 153
            +PG + A  
Sbjct: 59  FIPGSEAAGV 68

Length = 326

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 68.0 bits (167), Expect = 4e-13
 Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 37/161 (22%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEK---------FDVVYDAIG--QCDRA 198
           +A T ++   + L +LGA   I   +   EDL  +          DVV+D +G  Q  + 
Sbjct: 173 IATTRTSEKRDALLALGAAHVIVTDE---EDLVAEVLRITGGKGVDVVFDPVGGPQFAKL 229

Query: 199 VKAIKEGGTVV---ALTGAVTPPG----------FR----FVVTSNGEVLKK----LNPY 237
             A+  GGT+V   AL+G  TP            FR      +T + E  ++    +   
Sbjct: 230 ADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDG 289

Query: 238 LESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
           L SG +KP++D    FPF  +VEA  Y+E+ +  GK+V+ P
Sbjct: 290 LASGALKPVVDRV--FPFDDIVEAHRYLESGQQIGKIVVTP 328

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 66.4 bits (163), Expect = 1e-12
 Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 2/70 (2%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           MKA +   +GG +V +  E V  PQ    QVL++V A+ +NP+D K R+G   A   PLP
Sbjct: 1   MKALVLESFGGPEVFELRE-VPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARP-PLP 58

Query: 144 TVPGYDVAAT 153
            + G DVA  
Sbjct: 59  AILGCDVAGV 68

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 27/148 (18%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNF-EDLPEKFDVVYDAIGQ--CDRAVKAIKEGG 206
           +A T S   LE  K LGAD  I+ +  +  E + E  D + D +G    + ++KA++ GG
Sbjct: 194 IAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIIDTVGPATLEPSLKALRRGG 253

Query: 207 TVV-----ALTGAVTPPGFRFV------VTSNG-------EVLKKLNPYLESGKVKPIID 248
           T+V             P F  +      V S         E L     +   GK+KP I 
Sbjct: 254 TLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALD----FAAEGKIKPEIL 309

Query: 249 PKGPFPFSQVVEAFSYIETNKATGKVVI 276
                P  ++ EA+  +E  K  G+ VI
Sbjct: 310 ET--IPLDEINEAYERMEKGKVRGRAVI 335

Length = 339

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score = 64.5 bits (158), Expect = 6e-12
 Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 32/154 (20%)

Query: 149 DVAATSSTRNLEFLKSLGADLAIDYTKDN----FEDLPEKFDVVYDAIGQ---CDRAVKA 201
            VA  +  + LE  K LGA   +D ++++     ED P  FDVV +A G     ++A++ 
Sbjct: 188 TVAEPNEEK-LELAKKLGATETVDPSREDPEAQKEDNPYGFDVVIEATGVPKTLEQAIEY 246

Query: 202 IKEGGTVVALTGAVTPPGFRFVVTSNGEVLKK--------LNPY--------LESGK--V 243
            + GGTV+     V  P  R  ++   E+ +K        +NPY        LESGK  V
Sbjct: 247 ARRGGTVLVF--GVYAPDARVSISPF-EIFQKELTIIGSFINPYTFPRAIALLESGKIDV 303

Query: 244 KPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH 277
           K ++  +   P  +V EA   +  +    KVV+ 
Sbjct: 304 KGLVSHR--LPLEEVPEALEGMR-SGGALKVVVV 334

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 46/172 (26%), Positives = 68/172 (39%), Gaps = 47/172 (27%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTK-DNFEDL---------PEKFDVVYDAIG------ 193
           V  T S+R+ E  K LGAD  IDY      + L           KFD++ D +G      
Sbjct: 181 VVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFP 240

Query: 194 QCDRAVKAIKEGGTVVALTG------------AVTPPGF-----------------RFVV 224
             +  +K   + G  V + G            +   P                    F++
Sbjct: 241 HINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLL 300

Query: 225 TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
             N + ++K    +  GKVKP ID    +PF    EAF  +++N+A GKVVI
Sbjct: 301 DPNADWIEKCAELIADGKVKPPIDSV--YPFEDYKEAFERLKSNRAKGKVVI 350

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 62.6 bits (153), Expect = 3e-11
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 29/155 (18%)

Query: 147 GYDVAATSSTR-NLEFLKSLGADLAIDYTKD-NFEDLPEKF--------DVVYDAIGQC- 195
           G  V ATSS+   LE  K+LGAD  I+Y    ++ +  E          D V +  G   
Sbjct: 184 GARVIATSSSDEKLERAKALGADHVINYRTTPDWGE--EVLKLTGGRGVDHVVEVGGPGT 241

Query: 196 -DRAVKAIKEGGTVV---ALTGAVTPPGFRFVVTSNGEV----------LKKLNPYLESG 241
             +++KA+  GG +     L+G   P     ++T    +           + +N  +E+ 
Sbjct: 242 LAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAH 301

Query: 242 KVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
           +++P+ID    FPF +  EA+ Y+E+    GKVVI
Sbjct: 302 RIRPVID--RVFPFEEAKEAYRYLESGSHFGKVVI 334

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 41/162 (25%), Positives = 56/162 (34%), Gaps = 31/162 (19%)

Query: 147 GYDVAATSSTRNLEFLKSLGADLAIDYTKDNFED-----LPEKFDVVYDAIG------QC 195
           GY V  T+S +N + +KSLGAD   DY   +  +        K     D I        C
Sbjct: 179 GYKVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLC 238

Query: 196 DRAVKAIKEGGTVVALTGAVTPPGFR--------FVVTSNGEVL----------KKLNPY 237
             A+     GG +V+L         R           T  GE+           K L   
Sbjct: 239 AEAL-GRSGGGKLVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPEL 297

Query: 238 LESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATG-KVVIHP 278
           LE GK+KP            V E    +   K +G K+V+  
Sbjct: 298 LEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 59.5 bits (145), Expect = 3e-10
 Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 14/84 (16%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQV-KEDQVLIKVVAAALNPVD-----G--------K 129
           MKAW    YGG+D L   E   +P + K +QVLIKV AA++NP+D     G        K
Sbjct: 1   MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKK 60

Query: 130 RRQGKFKATDSPLPTVPGYDVAAT 153
           R+    K +    P   G D +  
Sbjct: 61  RKPQSCKYSGIEFPLTLGRDCSGV 84

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           MKAW+  + G    L   E++ +P     +VL+KV AA LNPVD K       A     P
Sbjct: 1   MKAWVLPKPGAALQLT-LEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA--WSYP 57

Query: 144 TVPGYDVA 151
            VPG D A
Sbjct: 58  HVPGVDGA 65

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 59.2 bits (144), Expect = 4e-10
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 3/69 (4%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFK-ATDSPL 142
           +    YG      +L  + +V +P  K  +VL+KV AA++NPVD K R+G  K     P 
Sbjct: 1   VVYTRYG--SPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPF 58

Query: 143 PTVPGYDVA 151
           P +PG D A
Sbjct: 59  PPIPGMDFA 67

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 58.4 bits (142), Expect = 7e-10
 Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)

Query: 147 GYDVAATSSTRNLEFLKSLGADLAIDY-TKDNFEDLPE-----KFDVVYDAIGQCD--RA 198
           G  V  T S RN E++KSLGAD  IDY  +D  E + E       D V D +G       
Sbjct: 166 GLRVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAAL 225

Query: 199 VKAIKEGGTVVALTGAV---TPPGFRFVVT----------------------SNGEVLKK 233
              +   G +V + G       P F   ++                        GE L +
Sbjct: 226 APTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLE 285

Query: 234 LNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVV 275
           L           +I+     PF Q+ EA   ++     GK+V
Sbjct: 286 L--LAAGKLEPLVIE---VLPFEQLPEALRALKDRHTRGKIV 322

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 58.4 bits (142), Expect = 7e-10
 Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 34/162 (20%)

Query: 147 GYDVAAT-SSTRNLEFLKSLGADLAIDYTKDNF------EDLPEKFDVVYDAIGQ--CDR 197
           G  V  T  S       ++LGAD+AI+Y +++F      E   +  DV+ D +G    +R
Sbjct: 164 GARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNR 223

Query: 198 AVKAIKEGGTVV--ALTGAVT-----PP--GFRFVVTSN--------------GEVLKKL 234
            +KA+   G +V     G         P    R  +T +               E+ + +
Sbjct: 224 NIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHV 283

Query: 235 NPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
            P L SG+V+P+ID    FP     +A + +E+    GK+V+
Sbjct: 284 WPLLASGRVRPVIDKV--FPLEDAAQAHALMESGDHIGKIVL 323

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 57.2 bits (139), Expect = 1e-09
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           M+A  + ++GG +VL+ +E + VP     +VLI+V A  LN  D   R+G +     PLP
Sbjct: 1   MRAVRFHQFGGPEVLRIEE-LPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIE-PPPLP 58

Query: 144 TVPGYDVAAT 153
              GY+ A  
Sbjct: 59  ARLGYEAAGV 68

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 24/146 (16%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEK--FDVVYDAIG--QCDRAVKAIKEG 205
           +A T S   L+ LK LGAD  ID      ED+ +    DVV + +G    + +++++ +G
Sbjct: 191 IAVTRSPEKLKILKELGADYVID-GSKFSEDVKKLGGADVVIELVGSPTIEESLRSLNKG 249

Query: 206 GTVVALTGAVTP------PGF----RFVVTSNG-----EVLKKLNPYLESGKVKPIIDPK 250
           G +V L G VTP      PG        +  +      +V + L   ++ GK+KP+ID  
Sbjct: 250 GRLV-LIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALK-LVKEGKIKPVIDRV 307

Query: 251 GPFPFSQVVEAFSYIETNKATGKVVI 276
                  + EA   +++ K  G++V+
Sbjct: 308 --VSLEDINEALEDLKSGKVVGRIVL 331

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 45/170 (26%), Positives = 69/170 (40%), Gaps = 43/170 (25%)

Query: 147 GYDVAATSSTRNLEFLKSLGADLAIDYTKDNFED---LPEKFDVVYDAIG--QCDRAVKA 201
           G +V  T+S RN   L+ LGA   IDY   ++      P   DVV+D +G    + +  A
Sbjct: 164 GAEVYGTASERNHAALRELGA-TPIDYRTKDWLPAMLTPGGVDVVFDGVGGESYEESYAA 222

Query: 202 IKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLN-----------------------PY- 237
           +  GGT+V   G  +    R  + + G +L +L                        P  
Sbjct: 223 LAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKL 282

Query: 238 -----------LESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
                      L  GK++P I  +   P S+V EA   +E+ K  GK+V+
Sbjct: 283 FRQDLTELLDLLAKGKIRPKIAKR--LPLSEVAEAHRLLESGKVVGKIVL 330

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 57.2 bits (139), Expect = 2e-09
 Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 7/69 (10%)

Query: 84  MKA-WLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPL 142
            KA  L G  GG+ V+     V VP+   D+VL+KV A ALNPVD K +   F       
Sbjct: 1   QKAAVLTGPGGGLLVVV---DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFI---PSY 54

Query: 143 PTVPGYDVA 151
           P + G D A
Sbjct: 55  PAILGCDFA 63

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 12/97 (12%)

Query: 147 GYDVAATSST-RNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIGQCD---R 197
           G  V  T  +   LE  K LGAD  IDY +++ E+          DVV DA+G  +   +
Sbjct: 158 GARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQ 217

Query: 198 AVKAIKEGGTVV---ALTGAVTPPGFRFVVTSNGEVL 231
           A++ ++ GG +V     +G       R ++     ++
Sbjct: 218 ALRLLRPGGRIVVVGGTSGGPPLDDLRRLLFKELTII 254

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 55.7 bits (135), Expect = 6e-09
 Identities = 50/179 (27%), Positives = 70/179 (39%), Gaps = 46/179 (25%)

Query: 144 TVPGYDVAATSSTRNLEFLKSLGADLAIDYTKDNFED-----LPEKFDVVYDAIGQCD-- 196
           TVP   V  T+S    E LK  G    IDY   ++ +      PE  D+V DA+G  D  
Sbjct: 161 TVPNVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTR 220

Query: 197 RAVKAIKEGGTVVA-----LTGAVTPPGFRFV--------------VTSN---------- 227
           ++   +K  G +V      L        F+                ++ N          
Sbjct: 221 KSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGW 280

Query: 228 --------GEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
                    EV+ KL    E GK+KP ID    FPF +V EA   +++ K  GKVV+ P
Sbjct: 281 LFEERELLTEVMDKLLKLYEEGKIKPKIDSV--FPFEEVGEAMRRLQSRKNIGKVVLTP 337

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 55.4 bits (134), Expect = 6e-09
 Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF 135
           M+A     +GGVDVLK  E    P  K + VLIKV AA +N  D  +RQGK+
Sbjct: 2   MRAVTLKGFGGVDVLKIGE-SPKPAPKRNDVLIKVSAAGVNRADTLQRQGKY 52

Length = 334

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 55.0 bits (133), Expect = 9e-09
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 21/151 (13%)

Query: 147 GYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDL----PEKFDVVYDAIG--QCDRAVK 200
           G  V A +     E +++LGAD  I        D      E  DVV D +G       ++
Sbjct: 202 GAIVIAVAGAAKEEAVRALGADTVILRDAPLLADAKALGGEPVDVVADVVGGPLFPDLLR 261

Query: 201 AIKEGGTVV---ALTGAVTPPGFRFV----VTSNG------EVLKKLNPYLESGKVKPII 247
            ++ GG  V   A+ G V     R +    +T  G      EV ++L  Y+E G+++P++
Sbjct: 262 LLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTREVFRRLVRYIEEGEIRPVV 321

Query: 248 DPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
                FP S++ EA +     +  GK+V+ P
Sbjct: 322 A--KTFPLSEIREAQAEFLEKRHVGKLVLVP 350

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 54.4 bits (132), Expect = 1e-08
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 91  EYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV 150
           + GG +VL++++ V VP+    +VL++  A  +N +D   R G +     PLP V G + 
Sbjct: 7   KTGGPEVLEYED-VPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL---PLPFVLGVEG 62

Query: 151 AAT 153
           A  
Sbjct: 63  AGV 65

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 53.6 bits (130), Expect = 3e-08
 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 10/72 (13%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           MKA +  E GG +VL+  E V  P     +VLI+V AA +N  D  +RQG +     P P
Sbjct: 1   MKAIVIKEPGGPEVLELGE-VPKPAPGPGEVLIRVAAAGVNRADLLQRQGLY-----PPP 54

Query: 144 ----TVPGYDVA 151
                + G +VA
Sbjct: 55  PGASDILGLEVA 66

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 53.1 bits (128), Expect = 4e-08
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 1/87 (1%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           M+A L   +GG+D L + + V VP     +VLI+V A  +N  D   R+G +        
Sbjct: 1   MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDG-A 59

Query: 144 TVPGYDVAATSSTRNLEFLKSLGADLA 170
           T       A      L F +  GAD+ 
Sbjct: 60  TDSTGAGEAGWWGGTLSFPRIQGADIV 86

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 52.8 bits (128), Expect = 4e-08
 Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 37/158 (23%)

Query: 153 TSSTRNLEFLKSLGADLAIDYTKDNFEDLPEK---------FDVVYDAIGQ--CDRAVKA 201
            SS    E  ++ GAD  I+Y     ED  E+          DVVYD +G+   + ++ +
Sbjct: 168 VSSEEKAELARAAGADHVINYRD---EDFVERVREITGGRGVDVVYDGVGKDTFEGSLDS 224

Query: 202 IKEGGTVVAL---TGAVTP-------PGFRFV--------VTSNGEVLK---KLNPYLES 240
           ++  GT+V+    +G V P        G  F+        + +  E+L    +L   + S
Sbjct: 225 LRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVAS 284

Query: 241 GKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
           GK+K  I     +P +   +A   +E+ K TGK+++ P
Sbjct: 285 GKLKVEIG--KRYPLADAAQAHRDLESRKTTGKLLLIP 320

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 52.5 bits (127), Expect = 7e-08
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 4/72 (5%)

Query: 84  MKAWLYGEYGGVDVLK--FDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSP 141
           MKA  + +   +       D ++  P      +L++V A ++NPVD K R G        
Sbjct: 1   MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQ- 59

Query: 142 LPTVPGYDVAAT 153
            P + G+D +  
Sbjct: 60  -PKILGWDASGV 70

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 51.8 bits (125), Expect = 1e-07
 Identities = 32/156 (20%), Positives = 56/156 (35%), Gaps = 29/156 (18%)

Query: 150 VAAT-SSTRNLEFLKSLGADLAIDYTKDNFED------LPEKFDVVYD--AIGQCDRAVK 200
           V AT SS    E ++  GAD   +Y  ++  D        +  DV+ +  A     + + 
Sbjct: 172 VIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLD 231

Query: 201 AIKEGGTVVALTGAVTPPGF------------RFVVTSN------GEVLKKLNPYLESGK 242
            +  GG +V                       R V+             + +   L  G 
Sbjct: 232 VLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGA 291

Query: 243 VKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
           ++P+I  +  +P  +   A   +E+  A GKVV+ P
Sbjct: 292 LRPVIARE--YPLEEAAAAHEAVESGGAIGKVVLDP 325

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 51.0 bits (123), Expect = 2e-07
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)

Query: 85  KAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPT 144
           +A +   +GG+D LK +++  +P+    +V ++V A  LN  D   RQG + +     P 
Sbjct: 1   RAVVLTGFGGLDKLKVEKE-ALPEPSSGEVRVRVEACGLNFADLMARQGLYDSA-PKPPF 58

Query: 145 VPGYDVAAT 153
           VPG++ A T
Sbjct: 59  VPGFECAGT 67

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 9/69 (13%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEK------FDVVYDAIGQ---CDRAVK 200
           +A   S   LE  K LGAD  I+Y  ++F +   +       DVV D +G     ++A++
Sbjct: 19  IAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRGVDVVIDCVGAPATLEQALE 78

Query: 201 AIKEGGTVV 209
            ++ GG VV
Sbjct: 79  LLRPGGRVV 87

Length = 131

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 50.2 bits (121), Expect = 3e-07
 Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGK--FKATDSP 141
           MKA +  E GG + L  +E    P     +V I+V AA +N  D    QGK   K    P
Sbjct: 1   MKAVVCKELGGPEDLVLEEVPPEPG-APGEVRIRVEAAGVNFPDLLMIQGKYQVKP---P 56

Query: 142 LPTVPGYDVA 151
           LP VPG +VA
Sbjct: 57  LPFVPGSEVA 66

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 33/158 (20%)

Query: 147 GYDVAATSSTRNLE---FLKSLGADLAIDYTKDNFEDL---PEKFDVVYDAIG--QCDRA 198
           G  V AT  TR+ E    LK LGAD  +       E L   P  FD V + +G      +
Sbjct: 167 GATVTAT--TRSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTATLKDS 224

Query: 199 VKAIKEGGTVVALTG---------------AVTPPGFRFVVTS-----NGEVLKKLNPYL 238
           ++ ++ GG V  +TG                +       +  S         L++L  ++
Sbjct: 225 LRHLRPGGIV-CMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFV 283

Query: 239 ESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
            +G +         F F ++VEA +Y+E+N+A GKVV+
Sbjct: 284 AAGHLDIPPSKV--FTFDEIVEAHAYMESNRAFGKVVV 319

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 49.9 bits (120), Expect = 4e-07
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           MKA +   +GG +VL++ + +  P+   D+VL++V AAALN +D   R+G       PLP
Sbjct: 1   MKAVVIRGHGGPEVLEYGD-LPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIK-LPLP 58

Query: 144 TVPGYDVA 151
            + G D A
Sbjct: 59  HILGSDGA 66

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 50.4 bits (121), Expect = 4e-07
 Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 33/159 (20%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFED------LPEKFDVVYDAIG--QCDRAVKA 201
           +        +E LK+LGAD  ID + ++               +  DA+G     R  ++
Sbjct: 167 INVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARS 226

Query: 202 IKEGGTVV---ALTGAVTPP----GFRFVVTSNG----------------EVLKKLNPYL 238
           ++ GGT+V    L+G   P          +T  G                E   ++   +
Sbjct: 227 LRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLV 286

Query: 239 ESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH 277
           E+G +   +  K  FP     EA +  E     GKV++ 
Sbjct: 287 EAGVLTTPVGAK--FPLEDFEEAVAAAEQPGRGGKVLLT 323

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 49.2 bits (118), Expect = 7e-07
 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 10/72 (13%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           MKA    E GG +VL   E V +P  K  +VLI+V AA +N  D  +R GK+     P P
Sbjct: 1   MKAIEITEPGGPEVLVLVE-VPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKY-----PPP 54

Query: 144 ----TVPGYDVA 151
                + G +VA
Sbjct: 55  PGASDILGLEVA 66

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 49.0 bits (118), Expect = 8e-07
 Identities = 45/147 (30%), Positives = 59/147 (40%), Gaps = 30/147 (20%)

Query: 159 LEFLKSLGADLAIDYTKDNFEDLPEK---------FDVVYDAIG--QCDR-AVKAIKEGG 206
           LEF K LGA   ++   ++  +  EK          DVV +  G   C + A+ A + GG
Sbjct: 200 LEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGG 259

Query: 207 TVVALTG-AVTPPGFRFVVTSNGEV-LKKLNPY----------LESGK--VKPIIDPKGP 252
           TVV L G             S  E+ ++ +  Y          L SGK  VKP+I     
Sbjct: 260 TVV-LVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPLIT--HR 316

Query: 253 FPFSQVVEAFSYIETNKATG-KVVIHP 278
           FP    VEAF      K    KVVI  
Sbjct: 317 FPLEDAVEAFETAAKGKKGVIKVVIEG 343

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 48.3 bits (116), Expect = 1e-06
 Identities = 46/141 (32%), Positives = 57/141 (40%), Gaps = 22/141 (15%)

Query: 159 LEFLKSLGADLAIDYTKDNFEDLP------EKFDVVYDAIGQCD---RAVKAIKEGGTVV 209
           LEF + LGAD  I+   ++           E  DVV DA G       AV+ +  GG VV
Sbjct: 196 LEFARELGADDTINVGDEDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVV 255

Query: 210 AL---TGAVTPPGFRFV---VT------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQ 257
            +    G VT P   F    +T      +  E    +   LESGKV P       FPF  
Sbjct: 256 LVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHRFPFED 315

Query: 258 VVEAFSYIETNKA-TGKVVIH 277
           V EAF   E       KV+I 
Sbjct: 316 VPEAFDLWEAPPGGVIKVLIE 336

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 33/147 (22%)

Query: 157 RNLEFLKSLGADLAIDYTKDNF------EDLPEKFDVVYDAIGQ---CDRAVKAIKEGGT 207
             LE  K LGAD  ++ + D+         L   FDV++D +G     + A KA+K GG 
Sbjct: 200 EKLELAKELGADEVLN-SLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGR 258

Query: 208 VVA---LTGAVTPPGFRF------VVTSNG-------EVLKKLNPYLESGKVKPIIDPKG 251
           +V        +T            ++ S G       EVL      +  GK+ P ++   
Sbjct: 259 IVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLD----LIAKGKLDPQVET-- 312

Query: 252 PFPFSQVVEAFSYIETNKATGKVVIHP 278
             P  ++ E    +   K  G+VV+ P
Sbjct: 313 -RPLDEIPEVLERLHKGKVKGRVVLVP 338

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 34/161 (21%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG--QCDRAVKAI 202
           +   SS    EFLKSLG D  I+Y  ++  ++     P+  DVVY+++G    D  V  +
Sbjct: 168 IGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNL 227

Query: 203 KEGGTVV---ALTGAVTPPGFRFV-------------VTSNG-----------EVLKKLN 235
              G ++    ++G  +  G   V              +  G           + L +L 
Sbjct: 228 ALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLL 287

Query: 236 PYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
              + GK+   +DP        V +A  Y+ + K  GKVV+
Sbjct: 288 QLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVV 328

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score = 46.3 bits (111), Expect = 7e-06
 Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 41/162 (25%)

Query: 150 VAATSSTRNLEFLKS-LGADLAIDYTKDNF-EDL----PEKFDVVYDAIG--QCDRAVKA 201
           V    S     +L   LG D AI+Y   +  E L    P+  DV +D +G    D A+  
Sbjct: 174 VGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGEILDAALTL 233

Query: 202 IKEGGTVVALTGAV------TPPGFR--------------FVVTSN----GEVLKKLNPY 237
           + +GG +    GA+       PPG +              F+V+       E L +L  +
Sbjct: 234 LNKGGRIALC-GAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKW 292

Query: 238 LESGKVKP---IIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
           L  GK+K    +++  G        EAF  + T K TGK+V+
Sbjct: 293 LAEGKLKYREDVVE--G---LENAPEAFLGLFTGKNTGKLVV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 46.2 bits (110), Expect = 8e-06
 Identities = 39/154 (25%), Positives = 59/154 (38%), Gaps = 33/154 (21%)

Query: 147 GYDVAA-TSSTRNLEFLKSLGADLAIDYTKDNFEDLPEK-FDVV------YDAIGQCDRA 198
           G++  A T S    E  + LGAD  +D   +  E       DV+        A      A
Sbjct: 186 GFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVTVVSGAAAEA---A 242

Query: 199 VKAIKEGGTVVALTGA-----VTPPGFRFVV--------TSNGEVLKKLNPYLE---SGK 242
           +  ++ GG +V L G       +P  F  ++        T  G     L   L+    GK
Sbjct: 243 LGGLRRGGRIV-LVGLPESPPFSPDIFPLIMKRQSIAGSTHGG--RADLQEALDFAAEGK 299

Query: 243 VKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
           VKP+I+    FP  Q  EA+  +E      + V+
Sbjct: 300 VKPMIE---TFPLDQANEAYERMEKGDVRFRFVL 330

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 5/68 (7%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           MKA ++ E  G++ LK ++ V  P+    +VLI+V  A +NPVD        K    P+P
Sbjct: 1   MKALVF-EKSGIENLKVED-VKDPKPGPGEVLIRVKMAGVNPVD-YNVINAVKV--KPMP 55

Query: 144 TVPGYDVA 151
            +PG + A
Sbjct: 56  HIPGAEFA 63

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 11/87 (12%)

Query: 84  MKAWLYGEYGGV-DVLKFDEKVTVPQVKE-DQVLIKVVAAALNPVDGKRRQGKF---KAT 138
            KA +Y E+G   +VL+  E   +P     ++VL+K++AA +NP D  + QG +     T
Sbjct: 1   AKALVYTEHGEPKEVLQL-ESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPT 59

Query: 139 DSPLPTVPGYD-----VAATSSTRNLE 160
               P V G +     V   S  ++L+
Sbjct: 60  TPEPPAVGGNEGVGEVVKVGSGVKSLK 86

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 43.9 bits (104), Expect = 4e-05
 Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 35/159 (22%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEK---------FDVVYDAIGQC--DRA 198
           V A         +++LGAD+A+DYT+    D P++           VV D +G      A
Sbjct: 171 VGAAGGPAKTALVRALGADVAVDYTR---PDWPDQVREALGGGGVTVVLDGVGGAIGRAA 227

Query: 199 VKAIKEGGTVV---ALTGAVTPP--------GFRFVVTSNGEVLKKLNPYLES------- 240
           +  +  GG  +     +G  T          G   V     +  +     LE+       
Sbjct: 228 LALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAA 287

Query: 241 -GKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
            G++ P++     FP  +  EA + +E     GKV++ P
Sbjct: 288 AGRLVPVVG--QTFPLERAAEAHAALEARSTVGKVLLLP 324

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 43.9 bits (105), Expect = 4e-05
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 228 GEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
            E+L ++      G ++P+  P   FP S   +AF Y++  K  GKVV+
Sbjct: 241 RELLAEVLELFAEGVLRPL--PVTVFPISDAEDAFRYMQQGKHIGKVVL 287

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 5e-05
 Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 27/134 (20%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEK---FDVVYDAIGQCD---RAVKAIK 203
           V A  S R+L   + +GAD  ++   D+ +    +   FDV ++  G        ++  +
Sbjct: 198 VCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSSINTCLEVTR 257

Query: 204 EGGTVVALTGAVTPP----------------GFRFVVTSNGEVLKKLNPYLESGKVKPII 247
             G +V +     PP                 FRF    N  V      +L +G + P+ 
Sbjct: 258 AKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAV-----SWLANGVINPLP 312

Query: 248 DPKGPFPFSQVVEA 261
                +PF+ + EA
Sbjct: 313 LLSAEYPFTDLEEA 326

Length = 343

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 43.7 bits (104), Expect = 6e-05
 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
            KA +  E  G  V  F   + +  + E  VLI+V  ++LN  D     G    T    P
Sbjct: 1   FKALVVEEQDG-GVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVT-RNYP 58

Query: 144 TVPGYDVAAT 153
             PG D A T
Sbjct: 59  HTPGIDAAGT 68

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 38/159 (23%)

Query: 151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKF------DVVY-----DAIGQCDRAV 199
           A  SS   LE+LK LG    I+Y +++FE+   +       DVV      +AI +    +
Sbjct: 150 ATASSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQK---GL 206

Query: 200 KAIKEGGTVV--ALTGAVTPPGFRFVVTSN--------------------GEVLKKLNPY 237
             +  GG  V  A+T   + P     V SN                     +   ++   
Sbjct: 207 NCLAPGGRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSL 266

Query: 238 LESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
           +E G+++P +     FPF  + EA+ Y+   +  GKVV+
Sbjct: 267 VEEGELRPTVSRI--FPFDDIGEAYRYLSDRENIGKVVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score = 43.3 bits (103), Expect = 7e-05
 Identities = 39/143 (27%), Positives = 56/143 (39%), Gaps = 30/143 (20%)

Query: 159 LEFLKSLGADLAIDYTKDNFEDLPE-----KFDVVYDAIG---QCDRAVKAIKEGG--TV 208
           L+  + LGAD  ++ + D  E++ E       D V D +G       A K + +GG   +
Sbjct: 205 LKLAERLGADHVLNASDDVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVI 264

Query: 209 VALTGAVTPPGFRF------VVTSNG-------EVLKKLNPYLESGKVKPIIDPKGPFPF 255
           V   G    P          V+ S         EV+  L    ESGKVK  I     FP 
Sbjct: 265 VGYGGHGRLPTSDLVPTEISVIGSLWGTRAELVEVVA-LA---ESGKVKVEITK---FPL 317

Query: 256 SQVVEAFSYIETNKATGKVVIHP 278
               EA   +   + TG+ V+ P
Sbjct: 318 EDANEALDRLREGRVTGRAVLVP 340

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 43.3 bits (103), Expect = 8e-05
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           MKAW     GG+D LK  E   VP+    +VL++V A +LN  D     G++       P
Sbjct: 1   MKAWRLSGGGGLDNLKLVE-EPVPEPGPGEVLVRVHAVSLNYRDLLILNGRY-PPPVKDP 58

Query: 144 TVPGYDVAA 152
            +P  D A 
Sbjct: 59  LIPLSDGAG 67

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 49/167 (29%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKE--GGT 207
           +  TSS   ++F K L A + I Y  D     P+   +        ++ V  + +  GG+
Sbjct: 169 IITTSSEEKVDFCKKLAAIILIRY-PDEEGFAPKVKKLT------GEKGVNLVLDCVGGS 221

Query: 208 VVALTGAVTPPGFRFVVTS--NGEVLKKLN------------------------------ 235
            ++ T  V     +++V     G  ++K N                              
Sbjct: 222 YLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVAS 281

Query: 236 ------PYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
                 PY+E G++KPI+D    +P  +V EA +++E NK  GKVV+
Sbjct: 282 FEREVLPYMEEGEIKPIVDRT--YPLEEVAEAHTFLEQNKNIGKVVL 326

Length = 334

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           MKA +  + GG +VLK  E + +P+ K   VLI+V A  LN  +   RQG   +     P
Sbjct: 1   MKAIVIEQPGGPEVLKLRE-IPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVK--FP 57

Query: 144 TVPG 147
            V G
Sbjct: 58  RVLG 61

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 31/151 (20%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDN---FEDLPEKFDVVYDAIGQ---CDRAVKAIK 203
           VA   +   L   +++GAD  ++  +D    +      FDVV++A G       A++ ++
Sbjct: 194 VATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFDVVFEASGAPAALASALRVVR 253

Query: 204 EGGTVVA---LTGAVTPPG-------------FRFVVTSNGEVLKKLNPYLESGK--VKP 245
            GGTVV    L G V  P              FRF       V       L +G+  V+P
Sbjct: 254 PGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAV-----RLLAAGRIDVRP 308

Query: 246 IIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
           +I     FP  +  EAF+       + KV +
Sbjct: 309 LI--TAVFPLEEAAEAFALAADRTRSVKVQL 337

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 39.9 bits (94), Expect = 9e-04
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)

Query: 84  MKAWLYGEYGG-VDVLKFD-EKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSP 141
           MKA L  EYG  ++V +    +  VP+    +VLIKV AA +NP D    +G++  +   
Sbjct: 1   MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQY-GSTKA 59

Query: 142 LPTVPG 147
           LP  PG
Sbjct: 60  LPVPPG 65

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT-DSPL 142
           MKA    EYG    L   E V VP+    QVL++V  A +   D     G +       L
Sbjct: 1   MKAARLYEYGKPLRL---EDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKL 57

Query: 143 PTVPGYDVAAT 153
           P   G++ A  
Sbjct: 58  PFTLGHENAGW 68

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 8/53 (15%)

Query: 77  VGTVPSEMKAWL-----YGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALN 124
           +G VP +M A+      YG+      L   E V VP++   +VL+ V+AA +N
Sbjct: 6   LGVVPEKMYAFAIRPERYGDPAQAIQL---EDVPVPELGPGEVLVAVMAAGVN 55

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 102 EKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVA 151
           E++ V   K  +V IKVVA  +   D     GK     +PLP + G++ A
Sbjct: 16  EEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP---TPLPVILGHEGA 62

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 29/146 (19%)

Query: 159 LEFLKSLGADLAIDYTKDNFEDLPEK------FDVVYDAIG---QCDRAVKAIKEGGTV- 208
           L+  K  GA   I+    +  +   +       D V +A+G     ++AVK ++ GGT+ 
Sbjct: 205 LDLAKEAGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIA 264

Query: 209 -VALTGA---VTPPG--------FRFVVTSNGEVLKKLNPYLESGKVKP--IIDPKGPFP 254
            V + G    +   G        F+  +      + +L   +E GK+ P  +I  +  FP
Sbjct: 265 NVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPSKLITHR--FP 322

Query: 255 FSQVVEAFSYIETNKATG--KVVIHP 278
              +++A+   + NK  G  KVVI P
Sbjct: 323 LDDILKAYRLFD-NKPDGCIKVVIRP 347

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 38.7 bits (91), Expect = 0.002
 Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 33/158 (20%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEK-----FDVVYDAIGQCD---RAVKA 201
           +A       L   + LGAD  I+  +++ E + E       D+V +A G      +A+  
Sbjct: 188 IAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRGADLVIEAAGSPATIEQALAL 247

Query: 202 IKEGGTVVAL---TGAVTPPGFRF--VVTSNGEVLKKLNPY---------------LESG 241
            + GG VV +    G VT     F  ++     +    N Y               L SG
Sbjct: 248 ARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASG 307

Query: 242 K--VKPIIDPKGPFPFSQVVEAFSYI-ETNKATGKVVI 276
           K  V+P+I      P      AF  + +  + +GKV++
Sbjct: 308 KIKVEPLIT--HRLPLEDGPAAFERLADREEFSGKVLL 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 38.7 bits (91), Expect = 0.002
 Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 28/154 (18%)

Query: 147 GYDVAATSS-TRNLEFLKSLGADLAIDYTKDN-FEDLPEKFD--------VVYDAIGQCD 196
           G  V A       LE  K LGAD  +D+ K +  E + E           V   +    +
Sbjct: 190 GLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYE 249

Query: 197 RAVKAIKEGGTVVAL----TGAVTPPGFRFV----------VTSNGEVLKKLNPYLESGK 242
           +A+  ++ GGT+V +     G +    F  V          V +  ++ + L      GK
Sbjct: 250 QALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAAR-GK 308

Query: 243 VKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
           VKP I      P   + E F  +E  K  G+VV+
Sbjct: 309 VKPHIQ---VVPLEDLNEVFEKMEEGKIAGRVVV 339

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 38.3 bits (90), Expect = 0.003
 Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 2/49 (4%)

Query: 228 GEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
            E+L+++   LE+G +KP+  P    P +  ++AF  +++ K  GKVV+
Sbjct: 247 RELLREVLELLEAGVLKPL--PPTVVPSASEIDAFRLMQSGKHIGKVVL 293

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	280
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	99.97
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	99.94
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	99.93
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	99.93
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	99.92
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	99.89
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	99.89
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	99.88
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	99.87
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	99.87
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	99.87
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	99.86
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	99.86
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	99.85
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	99.84
PLN02586	360	probable cinnamyl alcohol dehydrogenase	99.84
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	99.83
PLN02178	375	cinnamyl-alcohol dehydrogenase	99.83
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	99.83
PLN02740	381	Alcohol dehydrogenase-like	99.83
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.83
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	99.82
PLN02514	357	cinnamyl-alcohol dehydrogenase	99.82
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.81
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	99.81
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	99.81
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	99.81
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	99.81
PLN02827	378	Alcohol dehydrogenase-like	99.81
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	99.81
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	99.8
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	99.8
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	99.79
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	99.79
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	99.79
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	99.79
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	99.78
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	99.78
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	99.77
PRK10083	339	putative oxidoreductase; Provisional	99.76
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	99.76
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	99.76
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	99.75
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	99.75
PTZ00354	334	alcohol dehydrogenase; Provisional	99.74
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	99.74
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	99.74
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	99.74
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	99.73
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	99.73
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	99.72
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	99.72
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.72
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	99.72
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.71
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	99.71
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	99.71
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	99.7
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.7
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.7
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	99.7
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.7
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.7
PRK13771	334	putative alcohol dehydrogenase; Provisional	99.69
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	99.69
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.69
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	99.69
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	99.69
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	99.68
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.68
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.68
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	99.67
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	99.67
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	99.67
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.67
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.67
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	99.67
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.67
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	99.67
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	99.66
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.65
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.65
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.64
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	99.64
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	99.64
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.64
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	99.64
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	99.64
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	99.64
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	99.64
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.63
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.63
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.63
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	99.63
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	99.63
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.62
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	99.61
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	99.6
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.59
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.58
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	99.58
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.58
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.57
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.57
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	99.57
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.57
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	99.56
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.56
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.56
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.56
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	99.56
PLN02702	364	L-idonate 5-dehydrogenase	99.55
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.55
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.53
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.51
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.5
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	99.5
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.49
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.49
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.36
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.34
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.33
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.29
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.16
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	98.93
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	98.57
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	98.46
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	98.45
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	98.23
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	97.64
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.38
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	93.06
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	91.42
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	89.28
PF13823	23	ADH_N_assoc: Alcohol dehydrogenase GroES-associate	87.72
COG0144	355	Sun tRNA and rRNA cytosine-C5-methylases [Translat	82.31
PRK08306	296	dipicolinate synthase subunit A; Reviewed	81.76
PLN02494	477	adenosylhomocysteinase	80.67

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=99.97  E-value=5.6e-30  Score=228.70  Aligned_cols=192  Identities=30%  Similarity=0.446  Sum_probs=168.7

Q ss_pred             ccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE----------
Q 023571           81 PSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV----------  150 (280)
Q Consensus        81 p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~----------  150 (280)
                      |.+|||+++.+++++  +++. +++.|+|++|||+|+|+|||||++|+|.++|.++  ...+|.++|||+          
T Consensus         1 ~~~mkA~~~~~~~~p--l~i~-e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~--~~~~P~ipGHEivG~V~~vG~~   75 (339)
T COG1064           1 MMTMKAAVLKKFGQP--LEIE-EVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWP--VPKLPLIPGHEIVGTVVEVGEG   75 (339)
T ss_pred             CcceEEEEEccCCCC--ceEE-eccCCCCCCCeEEEEEEEEeecchhhhhhcCCCC--CCCCCccCCcceEEEEEEecCC
Confidence            457999999999988  8889 9999999999999999999999999999999997  456999999999          


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        76 V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~  155 (339)
T COG1064          76 VTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITT  155 (339)
T ss_pred             CccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeE
Confidence                                                                                            


Q ss_pred             ---------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC-CCccEEEe
Q 023571          151 ---------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP-EKFDVVYD  190 (280)
Q Consensus       151 ---------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~-~g~DvV~d  190 (280)
                                                             +.+.+++|++++++||+|++++.+++++.+.. +.+|+++|
T Consensus       156 y~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~  235 (339)
T COG1064         156 YRALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIID  235 (339)
T ss_pred             eeehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEE
Confidence                                                   78899999999999999999998877666654 34999999


Q ss_pred             CCC--CHHHHHhccccCCEEEEEcCCC-CC-Cce------------EEEEeecHHHHHHHHHHHHCCCceeecCCCcccc
Q 023571          191 AIG--QCDRAVKAIKEGGTVVALTGAV-TP-PGF------------RFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFP  254 (280)
Q Consensus       191 ~~g--~~~~~l~~l~~gG~vV~~g~~~-~~-~~~------------~~~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~  254 (280)
                      +++  .++.++++|+++|+++.+|... .+ ..+            .-++...+.++++++++.++|++++.+..  .++
T Consensus       236 tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i~e--~~~  313 (339)
T COG1064         236 TVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEILE--TIP  313 (339)
T ss_pred             CCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeEEe--eEC
Confidence            998  7899999999999999999884 22 111            12344468999999999999999999843  899


Q ss_pred             hhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          255 FSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       255 l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      ++|+++|++.|++++..|++||++.
T Consensus       314 l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         314 LDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             HHHHHHHHHHHHcCCeeeEEEecCC
Confidence            9999999999999999999999764

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.94  E-value=8.2e-26  Score=190.93  Aligned_cols=196  Identities=33%  Similarity=0.538  Sum_probs=169.1

Q ss_pred             cccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE---------
Q 023571           80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV---------  150 (280)
Q Consensus        80 ~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~---------  150 (280)
                      .|...|.+++++.|+.++++++ +.|+|+|.+||++||..|+|+|..|.+.++|.|.  +.++|++||.|.         
T Consensus         5 ~p~~~k~i~v~e~Ggydvlk~e-d~pv~~papgel~iknka~GlNfid~y~RkGlY~--~~plPytpGmEaaGvVvAvG~   81 (336)
T KOG1197|consen    5 SPPLLKCIVVTEFGGYDVLKLE-DRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD--PAPLPYTPGMEAAGVVVAVGE   81 (336)
T ss_pred             CCchheEEEEeccCCcceEEEe-eecCCCCCCCceEEeehhcCccHHHHHHhccccC--CCCCCcCCCcccceEEEEecC
Confidence            4566789999999999999999 9999999999999999999999999999999994  468999999999         


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        82 gvtdrkvGDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGl  161 (336)
T KOG1197|consen   82 GVTDRKVGDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGL  161 (336)
T ss_pred             CccccccccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHH
Confidence                                                                                            


Q ss_pred             --------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEE
Q 023571          151 --------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTV  208 (280)
Q Consensus       151 --------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~v  208 (280)
                                    +++++.+|++.+++.|+++.|+|+.+|+.++      ++|+|+++|.+|  ++...+.+|++.|++
T Consensus       162 ll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~m  241 (336)
T KOG1197|consen  162 LLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKM  241 (336)
T ss_pred             HHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHHhccCceE
Confidence                          6778899999999999999999999998765      379999999999  799999999999999


Q ss_pred             EEEcCCCC---CCceEEE-------Eee-------cH----HHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHh
Q 023571          209 VALTGAVT---PPGFRFV-------VTS-------NG----EVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIET  267 (280)
Q Consensus       209 V~~g~~~~---~~~~~~~-------~~~-------~~----~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~  267 (280)
                      |.+|....   +..+.+.       +++       ..    ....+++.++.+|.+++.+..  +|||+++.+|...+++
T Consensus       242 VSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~--~ypls~vadA~~dies  319 (336)
T KOG1197|consen  242 VSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDH--VYPLSKVADAHADIES  319 (336)
T ss_pred             EEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeee--ecchHHHHHHHHHHHh
Confidence            99998762   2222110       000       11    345677888899999999985  9999999999999999


Q ss_pred             CCCCeeEEEEeCC
Q 023571          268 NKATGKVVIHPIP  280 (280)
Q Consensus       268 ~~~~gkvVv~~~~  280 (280)
                      .+..||+++.+.|
T Consensus       320 rktvGkvlLlp~~  332 (336)
T KOG1197|consen  320 RKTVGKVLLLPGP  332 (336)
T ss_pred             hhccceEEEeCCc
Confidence            9999999998754

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=99.93  E-value=1.9e-25  Score=196.55  Aligned_cols=187  Identities=21%  Similarity=0.291  Sum_probs=159.6

Q ss_pred             ceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE------------
Q 023571           83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV------------  150 (280)
Q Consensus        83 ~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~------------  150 (280)
                      ++||++..+.+.|  |+++ ++.+.+|++|||+||+.|+|+||+|++.++|..|   ..+|.++|||+            
T Consensus         2 k~~aAV~~~~~~P--l~i~-ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p---~~~P~vLGHEgAGiVe~VG~gVt   75 (366)
T COG1062           2 KTRAAVAREAGKP--LEIE-EVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDP---EGFPAVLGHEGAGIVEAVGEGVT   75 (366)
T ss_pred             CceEeeeecCCCC--eEEE-EEecCCCCCCeEEEEEEEeeccccchhhhcCCCC---CCCceecccccccEEEEecCCcc
Confidence            4789999999988  9999 9999999999999999999999999999999997   34999999999            


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        76 ~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~  155 (366)
T COG1062          76 SVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKID  155 (366)
T ss_pred             ccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECC
Confidence                                                                                            


Q ss_pred             -----------------------------------------------------------EEecChhhHHHHHhCCCCEEE
Q 023571          151 -----------------------------------------------------------AATSSTRNLEFLKSLGADLAI  171 (280)
Q Consensus       151 -----------------------------------------------------------~~~~s~~~~~~l~~lga~~vi  171 (280)
                                                                                 +++.+++|++++++||++++|
T Consensus       156 ~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~v  235 (366)
T COG1062         156 PDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFV  235 (366)
T ss_pred             CCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceee
Confidence                                                                       788999999999999999999


Q ss_pred             eCCCC-CccccC-----CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCceE-----EEEe-----------e
Q 023571          172 DYTKD-NFEDLP-----EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGFR-----FVVT-----------S  226 (280)
Q Consensus       172 d~~~~-~~~~~~-----~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~~-----~~~~-----------~  226 (280)
                      |..+. +..+.+     +|+|++|||+|   .++.+++++.++|+.+.+|.......+.     +...           .
T Consensus       236 n~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~  315 (366)
T COG1062         236 NPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGAR  315 (366)
T ss_pred             cchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeecCCc
Confidence            99876 344432     59999999999   5899999999999999999877332221     1110           1


Q ss_pred             cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 023571          227 NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI  276 (280)
Q Consensus       227 ~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv  276 (280)
                      -+.++.++++|+.+|+++.....|+.++|+|++|||+.|.+|+.. |-||
T Consensus       316 p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi  364 (366)
T COG1062         316 PRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVI  364 (366)
T ss_pred             cccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEe
Confidence            247899999999999999888777899999999999999999875 4444

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=99.93  E-value=1.7e-24  Score=196.14  Aligned_cols=191  Identities=37%  Similarity=0.594  Sum_probs=158.8

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++.+.++++.++++ +.|.|.|++|||||||+|+|||+.|++.++|..+ ....+|.++|.|+             
T Consensus         1 mka~~~~~~g~~~~l~~~-e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~-~~~~~P~i~G~d~aG~V~avG~~V~~   78 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVV-EVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAP-PVRPLPFIPGSEAAGVVVAVGSGVTG   78 (326)
T ss_pred             CeEEEEeccCCCceeEEE-ecCCCCCCCCeEEEEEEEeecChHHHHhccCCCC-CCCCCCCcccceeEEEEEEeCCCCCC
Confidence            799999999998779999 9999999999999999999999999999999732 2346899999999             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~  158 (326)
T COG0604          79 FKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSA  158 (326)
T ss_pred             cCCCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHH
Confidence                                                                                            


Q ss_pred             -------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC------CCccEEEeCCC--CHHHHHhccccCCEEE
Q 023571          151 -------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------EKFDVVYDAIG--QCDRAVKAIKEGGTVV  209 (280)
Q Consensus       151 -------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------~g~DvV~d~~g--~~~~~l~~l~~gG~vV  209 (280)
                                   +++++++|.++++++|+|++|+|++++|.+.+      +++|+|||++|  .+..++++|+++|+++
T Consensus       159 aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv  238 (326)
T COG0604         159 AIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLV  238 (326)
T ss_pred             HHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEE
Confidence                         67788888899999999999999999987753      47999999999  6889999999999999


Q ss_pred             EEcCCCC-CC-ceE-------------EEEe-----ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhC-
Q 023571          210 ALTGAVT-PP-GFR-------------FVVT-----SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETN-  268 (280)
Q Consensus       210 ~~g~~~~-~~-~~~-------------~~~~-----~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~-  268 (280)
                      .+|.... .. .+.             ....     ...+.++++.+++++|.+++.+..  +|+|+|...+...+..+ 
T Consensus       239 ~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~--~~~l~e~~~a~a~~~~~~  316 (326)
T COG0604         239 SIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDR--VYPLAEAPAAAAHLLLER  316 (326)
T ss_pred             EEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceecc--EechhhhHHHHHHHHccc
Confidence            9998762 11 000             1111     125788899999999999999985  99999965555555444 


Q ss_pred             CCCeeEEEEe
Q 023571          269 KATGKVVIHP  278 (280)
Q Consensus       269 ~~~gkvVv~~  278 (280)
                      +..||+||++
T Consensus       317 ~~~GKvvl~~  326 (326)
T COG0604         317 RTTGKVVLKV  326 (326)
T ss_pred             CCcceEEEeC
Confidence            7889999974

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=1.9e-24  Score=188.49  Aligned_cols=196  Identities=21%  Similarity=0.295  Sum_probs=165.0

Q ss_pred             CCcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------
Q 023571           78 GTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------  150 (280)
Q Consensus        78 ~~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------  150 (280)
                      ..+|.+.++|.+..+++....++. +.++|+++++||+|+|.|||||++|+|.+.|.|+  ...+|.++|||+       
T Consensus         4 ~~~p~k~~g~~~~~~~G~l~p~~~-~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg--~s~~PlV~GHEiaG~Vvkv   80 (360)
T KOG0023|consen    4 MSIPEKQFGWAARDPSGVLSPEVF-SFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWG--LSKYPLVPGHEIAGVVVKV   80 (360)
T ss_pred             ccCchhhEEEEEECCCCCCCccee-EcCCCCCCCCcEEEEEEEEeccchhHHHhhccCC--cccCCccCCceeeEEEEEE
Confidence            367889999999998886667778 9999999999999999999999999999999997  488999999999       


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~a  160 (360)
T KOG0023|consen   81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASA  160 (360)
T ss_pred             CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhc
Confidence                                                                                            


Q ss_pred             -------------------------------------------------EEecCh-hhHHHHHhCCCCEEEeCC-CCCcc
Q 023571          151 -------------------------------------------------AATSST-RNLEFLKSLGADLAIDYT-KDNFE  179 (280)
Q Consensus       151 -------------------------------------------------~~~~s~-~~~~~l~~lga~~vid~~-~~~~~  179 (280)
                                                                       +.+.++ .|.+.+++||||.+++.. ++++.
T Consensus       161 APlLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~  240 (360)
T KOG0023|consen  161 APLLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIM  240 (360)
T ss_pred             cchhhcceEEeehhHHcCCCCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHH
Confidence                                                             455555 444566779999999988 67776


Q ss_pred             ccC-CCccEEEeCCC-----CHHHHHhccccCCEEEEEcCCCCCCceEE------------EEeecHHHHHHHHHHHHCC
Q 023571          180 DLP-EKFDVVYDAIG-----QCDRAVKAIKEGGTVVALTGAVTPPGFRF------------VVTSNGEVLKKLNPYLESG  241 (280)
Q Consensus       180 ~~~-~g~DvV~d~~g-----~~~~~l~~l~~gG~vV~~g~~~~~~~~~~------------~~~~~~~~l~~l~~ll~~G  241 (280)
                      +.. +-.|.++|++.     .++.++++||++|++|.+|....+..+..            +....+.+.+++++++.+|
T Consensus       241 ~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~~  320 (360)
T KOG0023|consen  241 KAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVARG  320 (360)
T ss_pred             HHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHcC
Confidence            654 55677777654     58999999999999999999885433321            2233678999999999999


Q ss_pred             CceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          242 KVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       242 ~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      .+++.+.   ..+++++++|++.|++++..++.||++.
T Consensus       321 ~ik~~IE---~v~~~~v~~a~erm~kgdV~yRfVvD~s  355 (360)
T KOG0023|consen  321 LIKSPIE---LVKLSEVNEAYERMEKGDVRYRFVVDVS  355 (360)
T ss_pred             CCcCceE---EEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence            9999887   7999999999999999999999999874

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.89  E-value=1.5e-22  Score=176.04  Aligned_cols=192  Identities=20%  Similarity=0.230  Sum_probs=162.9

Q ss_pred             cccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE---------
Q 023571           80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV---------  150 (280)
Q Consensus        80 ~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~---------  150 (280)
                      .+.+|||+++++++.|  |.++ ++.+++|+.+||+||+.|+|+|++|.+.++|..+  ...+|.++|||+         
T Consensus         4 kvI~CKAAV~w~a~~P--L~IE-ei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~--~~~fP~IlGHEaaGIVESvGe   78 (375)
T KOG0022|consen    4 KVITCKAAVAWEAGKP--LVIE-EIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDP--EGLFPVILGHEAAGIVESVGE   78 (375)
T ss_pred             CceEEeEeeeccCCCC--eeEE-EEEeCCCCCceEEEEEEEEeeccccceeecCCCc--cccCceEecccceeEEEEecC
Confidence            4678999999999998  8888 9999999999999999999999999999999875  567899999999         


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 gV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v  158 (375)
T KOG0022|consen   79 GVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISV  158 (375)
T ss_pred             CccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeeccee
Confidence                                                                                            


Q ss_pred             ---------------------------------------------------------------EEecChhhHHHHHhCCC
Q 023571          151 ---------------------------------------------------------------AATSSTRNLEFLKSLGA  167 (280)
Q Consensus       151 ---------------------------------------------------------------~~~~s~~~~~~l~~lga  167 (280)
                                                                                     .++.+++|.+.++++|+
T Consensus       159 ~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGa  238 (375)
T KOG0022|consen  159 AKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGA  238 (375)
T ss_pred             EecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCc
Confidence                                                                           78899999999999999


Q ss_pred             CEEEeCCCCC--cccc-----CCCccEEEeCCC---CHHHHHhccccC-CEEEEEcCCCCCCceEE--------------
Q 023571          168 DLAIDYTKDN--FEDL-----PEKFDVVYDAIG---QCDRAVKAIKEG-GTVVALTGAVTPPGFRF--------------  222 (280)
Q Consensus       168 ~~vid~~~~~--~~~~-----~~g~DvV~d~~g---~~~~~l~~l~~g-G~vV~~g~~~~~~~~~~--------------  222 (280)
                      +++||..+-.  ..+.     .+|+|+-|||+|   .+.+++.+.+.| |+-|.+|.......+.+              
T Consensus       239 Te~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs  318 (375)
T KOG0022|consen  239 TEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGS  318 (375)
T ss_pred             ceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEE
Confidence            9999988421  2221     279999999999   478999999999 99999998774432221              


Q ss_pred             --EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          223 --VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       223 --~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                        -....++++..+.+.+.++.++.....||.++|+++++||+.|.+|+.. +.||.
T Consensus       319 ~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~  374 (375)
T KOG0022|consen  319 AFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW  374 (375)
T ss_pred             ecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence              1123568899999999999998888788999999999999999999875 66654

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=99.89  E-value=6.2e-22  Score=180.66  Aligned_cols=128  Identities=21%  Similarity=0.395  Sum_probs=100.3

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCccccC---CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCceE---
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP---EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGFR---  221 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~---~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~~---  221 (280)
                      +++.+++++++++++|+++++|++++++.+..   +++|+||||+|   .++.++++|+++|+++.+|.......++   
T Consensus       199 ~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~  278 (343)
T PRK09880        199 CADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMT  278 (343)
T ss_pred             EEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHH
Confidence            45678899999999999999999876654422   46999999999   3789999999999999998754322111   


Q ss_pred             -------EE-EeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          222 -------FV-VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       222 -------~~-~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                             +. .....+.++++++++++|++++....+++|+|+|+.+|++.+++++..||+||.+
T Consensus       279 ~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        279 LIVKEISLKGSFRFTEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             HHhCCcEEEEEeeccccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence                   10 1123467899999999999987544446899999999999999988789999863

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.88  E-value=1.1e-21  Score=171.46  Aligned_cols=194  Identities=21%  Similarity=0.240  Sum_probs=156.0

Q ss_pred             cceeEEEEcccCCCccEEEeeeccCCCC-CCCcEEEEEEEEecChHHHHHHcCCCC-CCCCCCCcccCceE---------
Q 023571           82 SEMKAWLYGEYGGVDVLKFDEKVTVPQV-KEDQVLIKVVAAALNPVDGKRRQGKFK-ATDSPLPTVPGYDV---------  150 (280)
Q Consensus        82 ~~mka~~~~~~g~~~~l~l~~~~~~p~~-~~~eVlVkV~aagl~~~D~~~~~g~~~-~~~~~~P~i~G~e~---------  150 (280)
                      .+|+|+++...++   +++. +.|.|++ .|+||+|++.++|||++|+|++..... ....+.|+++|||.         
T Consensus         3 ~~~~A~vl~g~~d---i~i~-~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~   78 (354)
T KOG0024|consen    3 ADNLALVLRGKGD---IRIE-QRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGD   78 (354)
T ss_pred             cccceeEEEccCc---eeEe-eCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcc
Confidence            4589999988765   7888 9999987 999999999999999999998875443 22346899999999         


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePLsV~  158 (354)
T KOG0024|consen   79 EVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPLSVG  158 (354)
T ss_pred             cccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccchhhh
Confidence                                                                                            


Q ss_pred             ----------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCC-cc---cc---C-
Q 023571          151 ----------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDN-FE---DL---P-  182 (280)
Q Consensus       151 ----------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~-~~---~~---~-  182 (280)
                                                              +++..+.|+++++++|++.+.+..... ..   +.   . 
T Consensus       159 ~HAcr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~  238 (354)
T KOG0024|consen  159 VHACRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKAL  238 (354)
T ss_pred             hhhhhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhc
Confidence                                                    777889999999999999988766544 11   11   1 


Q ss_pred             --CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCceE------------EEEeecHHHHHHHHHHHHCCCcee
Q 023571          183 --EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGFR------------FVVTSNGEVLKKLNPYLESGKVKP  245 (280)
Q Consensus       183 --~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~~------------~~~~~~~~~l~~l~~ll~~G~l~~  245 (280)
                        ..+|++|||+|   .++.++.+++.+|+++..|.......++            -.+......+..+++++++|++..
T Consensus       239 g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGki~~  318 (354)
T KOG0024|consen  239 GKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGKIDV  318 (354)
T ss_pred             cccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCCcCc
Confidence              34999999999   5899999999999988877655333222            133334568999999999999988


Q ss_pred             ecCCCcccchhhHHHHHHHHHhCCC-CeeEEEEeC
Q 023571          246 IIDPKGPFPFSQVVEAFSYIETNKA-TGKVVIHPI  279 (280)
Q Consensus       246 ~~~~~~~~~l~~v~~A~~~l~~~~~-~gkvVv~~~  279 (280)
                      ....|+.|+++++.+||+.+..++. .-|+++..+
T Consensus       319 k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~  353 (354)
T KOG0024|consen  319 KPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP  353 (354)
T ss_pred             hhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence            8877889999999999999998875 357887764

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=99.87  E-value=6.4e-21  Score=172.39  Aligned_cols=189  Identities=26%  Similarity=0.411  Sum_probs=150.1

Q ss_pred             eeEEEEcccCCC---ccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE----------
Q 023571           84 MKAWLYGEYGGV---DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV----------  150 (280)
Q Consensus        84 mka~~~~~~g~~---~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~----------  150 (280)
                      |||+++..++.+   +.+++. +.|.|.|++|||+|+|.++|+|++|++.+.|.++. ...+|.++|||+          
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~-~~~~p~v~G~e~~G~V~~vG~~   78 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLP-EPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS-TKALPVPPGFEGSGTVVAAGGG   78 (324)
T ss_pred             CeEEEEeecCCCccccEEEec-ccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC-CCCCCcCCCcceEEEEEEECCC
Confidence            789999888765   568888 89999999999999999999999999999887642 123455555555          


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~vlv~~~g~g~vG~  158 (324)
T cd08291          79 PLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETAREEGAKAVVHTAAASALGR  158 (324)
T ss_pred             ccccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHhhccCCCcEEEEccCccHHHH
Confidence                                                                                            


Q ss_pred             --------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEE
Q 023571          151 --------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTV  208 (280)
Q Consensus       151 --------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~v  208 (280)
                                    +++.+++++++++++|++++++++..++.+.      .+++|++|||+|  .....+++++++|++
T Consensus       159 ~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~  238 (324)
T cd08291         159 MLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTL  238 (324)
T ss_pred             HHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEE
Confidence                          5567888999999999999999988776543      257999999998  567889999999999


Q ss_pred             EEEcCCCCC----C--------ceEEEE--------eecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhC
Q 023571          209 VALTGAVTP----P--------GFRFVV--------TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETN  268 (280)
Q Consensus       209 V~~g~~~~~----~--------~~~~~~--------~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~  268 (280)
                      +.+|.....    .        ...+..        ....+.+++++++++ |.+++.+..  +|+|+|+.+|++.++++
T Consensus       239 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~--~~~l~~~~~a~~~~~~~  315 (324)
T cd08291         239 YVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFAS--RYPLALTLEAIAFYSKN  315 (324)
T ss_pred             EEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cccccceee--EEcHHHHHHHHHHHHhC
Confidence            999864311    1        001100        112467889999998 999887664  89999999999999999


Q ss_pred             CCCeeEEEE
Q 023571          269 KATGKVVIH  277 (280)
Q Consensus       269 ~~~gkvVv~  277 (280)
                      +..||+||.
T Consensus       316 ~~~Gkvv~~  324 (324)
T cd08291         316 MSTGKKLLI  324 (324)
T ss_pred             CCCCeEEeC
Confidence            999999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=99.87  E-value=4.5e-21  Score=176.82  Aligned_cols=126  Identities=16%  Similarity=0.227  Sum_probs=97.7

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCccccC-----CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCC--ce
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP-----EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP--GF  220 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~-----~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~--~~  220 (280)
                      +++.+++|+++++++|+++++++.++++.+.+     +++|+||||+|   .+..++++++++|+++.+|......  .+
T Consensus       221 ~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~  300 (371)
T cd08281         221 AVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSV  300 (371)
T ss_pred             EEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeee
Confidence            45577889999999999999999877654432     47999999998   4789999999999999998754211  11


Q ss_pred             E----------E--EEee---cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 023571          221 R----------F--VVTS---NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI  276 (280)
Q Consensus       221 ~----------~--~~~~---~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv  276 (280)
                      .          +  ....   ..+.+.++++++++|++++....++.|+|+|+.+|++.+++++..+|+|+
T Consensus       301 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         301 PALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             cHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            1          1  1111   24678999999999999865444569999999999999999988877663

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=99.87  E-value=8.7e-21  Score=174.05  Aligned_cols=126  Identities=20%  Similarity=0.192  Sum_probs=96.0

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCC--Cc
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTP--PG  219 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~--~~  219 (280)
                      +++.+++++++++++|++++++++++++.+.      .+++|+||||+|   .+..++++++++|+++.+|.....  ..
T Consensus       206 ~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~  285 (358)
T TIGR03451       206 AVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLE  285 (358)
T ss_pred             EEcCCHHHHHHHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceee
Confidence            3446788899999999999999987765432      147999999998   478999999999999999875421  11


Q ss_pred             e----------EE--EEe---ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          220 F----------RF--VVT---SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       220 ~----------~~--~~~---~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                      +          .+  ...   ...+.++++++++++|++++....+++|+|+|+.+|++.+++++.. |+||.
T Consensus       286 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       286 LPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             ccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            1          11  111   1357889999999999998654444689999999999999988775 77764

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=99.86  E-value=1.5e-20  Score=170.82  Aligned_cols=188  Identities=21%  Similarity=0.236  Sum_probs=142.4

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++..+   +.++++ +.+.|.++++||+|+|.++|+|++|++.+.|.++. ....|.++|||+             
T Consensus         1 mka~~~~~~---~~l~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~   75 (339)
T cd08239           1 MRGAVFPGD---RTVELR-EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA-PAYQGVIPGHEPAGVVVAVGPGVTH   75 (339)
T ss_pred             CeEEEEecC---CceEEE-ecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc-cCCCCceeccCceEEEEEECCCCcc
Confidence            799998754   348999 99999999999999999999999999988765421 111233444433             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        76 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~  155 (339)
T cd08239          76 FRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHA  155 (339)
T ss_pred             CCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence                                                                                            


Q ss_pred             -------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccE
Q 023571          151 -------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDV  187 (280)
Q Consensus       151 -------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~Dv  187 (280)
                                                           +++.++++.++++++|+++++++++++ .+.      .+++|+
T Consensus       156 l~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~-~~~~~~~~~~~~~d~  234 (339)
T cd08239         156 LRRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD-VQEIRELTSGAGADV  234 (339)
T ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch-HHHHHHHhCCCCCCE
Confidence                                                 345678889999999999999987755 221      147999


Q ss_pred             EEeCCCC---HHHHHhccccCCEEEEEcCCCCCC-c---------eEE--EEeecHHHHHHHHHHHHCCCceeecCCCcc
Q 023571          188 VYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPP-G---------FRF--VVTSNGEVLKKLNPYLESGKVKPIIDPKGP  252 (280)
Q Consensus       188 V~d~~g~---~~~~l~~l~~gG~vV~~g~~~~~~-~---------~~~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~  252 (280)
                      ||||+|.   +..++++|+++|+++.+|...... .         ..+  ......+.++++++++++|.+++....+++
T Consensus       235 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~  314 (339)
T cd08239         235 AIECSGNTAARRLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLVTHR  314 (339)
T ss_pred             EEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeEEEE
Confidence            9999982   478999999999999998754211 0         001  112235789999999999999764444468


Q ss_pred             cchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          253 FPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       253 ~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      |+|+|+++|++.+++++ .||+||++
T Consensus       315 ~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         315 FGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             ecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            99999999999998875 69999874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.86  E-value=1.3e-20  Score=171.45  Aligned_cols=193  Identities=35%  Similarity=0.515  Sum_probs=153.8

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCC---CCCcccCceE----------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDS---PLPTVPGYDV----------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~---~~P~i~G~e~----------  150 (280)
                      |+...+..+.+...+.+.++.++|.|.+++++|++.++++|+.|++++.|.+.. ..   .+|.+.++++          
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~-~~~~~~~p~ii~~~g~~~~~~~~~~   83 (347)
T KOG1198|consen    5 IRRVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSP-IPLGREFPGIIGRDGSGVVGAVESV   83 (347)
T ss_pred             cceEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCC-CCCccCCCCccccccCCceeEEecc
Confidence            444455444444334444489999999999999999999999999999998863 23   5675555555          


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        84 g~~~~~~~~~g~~~~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv  163 (347)
T KOG1198|consen   84 GDDVVGGWVHGDAVVAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLV  163 (347)
T ss_pred             ccccccceEeeeEEeeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEE
Confidence                                                                                            


Q ss_pred             -----------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC-----CCccEEEeCCC--CHHHHHh
Q 023571          151 -----------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP-----EKFDVVYDAIG--QCDRAVK  200 (280)
Q Consensus       151 -----------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~-----~g~DvV~d~~g--~~~~~l~  200 (280)
                                             +++++.++.++++++|+|+++||+++++.+..     ++||+||||+|  .....+.
T Consensus       164 ~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~  243 (347)
T KOG1198|consen  164 LGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGSTLTKSLS  243 (347)
T ss_pred             EeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCCccccchh
Confidence                                   78899999999999999999999999887764     47999999998  5778888


Q ss_pred             ccccCCEEEEEcCCC------C-C-------------------CceEEEEeecHHHHHHHHHHHHCCCceeecCCCcccc
Q 023571          201 AIKEGGTVVALTGAV------T-P-------------------PGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFP  254 (280)
Q Consensus       201 ~l~~gG~vV~~g~~~------~-~-------------------~~~~~~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~  254 (280)
                      ++..+|+...++...      . .                   ..+.+.+...++.++.+.+++++|++++.+..  +||
T Consensus       244 ~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~--~~p  321 (347)
T KOG1198|consen  244 CLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDS--VYP  321 (347)
T ss_pred             hhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcce--eee
Confidence            998888655443332      0 0                   01123445578999999999999999999986  999


Q ss_pred             hhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          255 FSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       255 l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      ++++.+|++.+..+...||++++++
T Consensus       322 ~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  322 FSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             HHHHHHHHHHHhhcCCcceEEEEec
Confidence            9999999999999999999999875

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=99.85  E-value=1.2e-19  Score=164.73  Aligned_cols=180  Identities=19%  Similarity=0.281  Sum_probs=138.9

Q ss_pred             EEEcccCCC--ccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE--------------
Q 023571           87 WLYGEYGGV--DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV--------------  150 (280)
Q Consensus        87 ~~~~~~g~~--~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~--------------  150 (280)
                      +.+..+|.+  ..++++ +.|.|.|+++||+|||.++|+|++|++.+.|.++.  ...|.++|||+              
T Consensus         2 ~~~~~~g~~~~~~l~~~-~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~   78 (329)
T TIGR02822         2 WEVERPGPIEDGPLRFV-ERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV--HRPRVTPGHEVVGEVAGRGADAGGF   78 (329)
T ss_pred             eeeecCCcCCCCCceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC--CCCCccCCcceEEEEEEECCCCccc
Confidence            556666655  468999 99999999999999999999999999999887641  11233333333              


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~  158 (329)
T TIGR02822        79 AVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRAL  158 (329)
T ss_pred             CCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHH
Confidence                                                                                            


Q ss_pred             -----------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccCCCccEEEeCCC--
Q 023571          151 -----------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG--  193 (280)
Q Consensus       151 -----------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~~g~DvV~d~~g--  193 (280)
                                                         +++.+++|+++++++|++++|++.+..    .+++|+++++.|  
T Consensus       159 ~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~----~~~~d~~i~~~~~~  234 (329)
T TIGR02822       159 LRASLPPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP----PEPLDAAILFAPAG  234 (329)
T ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC----cccceEEEECCCcH
Confidence                                               456788899999999999999865321    246899898876  


Q ss_pred             -CHHHHHhccccCCEEEEEcCCC-CCCce----------EE--EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHH
Q 023571          194 -QCDRAVKAIKEGGTVVALTGAV-TPPGF----------RF--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVV  259 (280)
Q Consensus       194 -~~~~~l~~l~~gG~vV~~g~~~-~~~~~----------~~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~  259 (280)
                       .+..++++|+++|+++.+|... ....+          .+  .....++.+.++++++++|++++.   +++|+|+|++
T Consensus       235 ~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~i---~~~~~l~~~~  311 (329)
T TIGR02822       235 GLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRVT---THTYPLSEAD  311 (329)
T ss_pred             HHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCeeE---EEEEeHHHHH
Confidence             5889999999999999998742 11111          11  122245778899999999999853   3589999999


Q ss_pred             HHHHHHHhCCCCeeEEE
Q 023571          260 EAFSYIETNKATGKVVI  276 (280)
Q Consensus       260 ~A~~~l~~~~~~gkvVv  276 (280)
                      +|++.+++++..||+||
T Consensus       312 ~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       312 RALRDLKAGRFDGAAVL  328 (329)
T ss_pred             HHHHHHHcCCCceEEEe
Confidence            99999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=99.84  E-value=6.2e-20  Score=165.19  Aligned_cols=187  Identities=19%  Similarity=0.254  Sum_probs=134.7

Q ss_pred             ceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecC-hHHHHHHcCCCCCCC-CCCCcccCceE----------
Q 023571           83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALN-PVDGKRRQGKFKATD-SPLPTVPGYDV----------  150 (280)
Q Consensus        83 ~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~-~~D~~~~~g~~~~~~-~~~P~i~G~e~----------  150 (280)
                      +|||+++..+   +.++++ +.+.|+|++|||+|||.++||| ++|++.+.|.++... ..+|.++|||+          
T Consensus         1 ~~ka~~~~~~---~~l~~~-e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~   76 (308)
T TIGR01202         1 KTQAIVLSGP---NQIELR-EVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD   76 (308)
T ss_pred             CceEEEEeCC---CeEEEE-EecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence            4789998754   358999 9999999999999999999996 699999999875322 35788999998          


Q ss_pred             -----------------------------------------------------------------------EEe--cChh
Q 023571          151 -----------------------------------------------------------------------AAT--SSTR  157 (280)
Q Consensus       151 -----------------------------------------------------------------------~~~--~s~~  157 (280)
                                                                                             +.+  .+.-
T Consensus        77 v~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~a~~~~~~~a~~~~~~~~~~~~~vlV~G~G~v  156 (308)
T TIGR01202        77 TGFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQGALLALAATARHAVAGAEVKVLPDLIVGHGTL  156 (308)
T ss_pred             CCCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHHHhhhHHHHHHHHHHhcccCCCcEEEECCCHH
Confidence                                                                                   000  0000


Q ss_pred             ---hHHHHHhCCCCE------------------EEeCCCCCccccCCCccEEEeCCC---CHHHHHhccccCCEEEEEcC
Q 023571          158 ---NLEFLKSLGADL------------------AIDYTKDNFEDLPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTG  213 (280)
Q Consensus       158 ---~~~~l~~lga~~------------------vid~~~~~~~~~~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~  213 (280)
                         -.++++.+|+..                  ++|+.+.    ..+++|+||||+|   .++.++++++++|+++.+|.
T Consensus       157 G~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~~~i~~~~~----~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~  232 (308)
T TIGR01202       157 GRLLARLTKAAGGSPPAVWETNPRRRDGATGYEVLDPEKD----PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGF  232 (308)
T ss_pred             HHHHHHHHHHcCCceEEEeCCCHHHHHhhhhccccChhhc----cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEee
Confidence               112233334432                  2332211    1257999999999   37899999999999999987


Q ss_pred             CCCCCceE----------E--EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          214 AVTPPGFR----------F--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       214 ~~~~~~~~----------~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                      ...+..++          +  ......++++++++++++|++++....++.|+|+|+.+|++.+.+++..+|++|+
T Consensus       233 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       233 YTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             cCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            64332221          1  1112357899999999999998765555799999999999999887777999874

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=99.84  E-value=8.5e-20  Score=167.79  Aligned_cols=123  Identities=15%  Similarity=0.177  Sum_probs=91.6

Q ss_pred             ecChhh-HHHHHhCCCCEEEeCCCCC-ccccCCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCceE------
Q 023571          153 TSSTRN-LEFLKSLGADLAIDYTKDN-FEDLPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGFR------  221 (280)
Q Consensus       153 ~~s~~~-~~~l~~lga~~vid~~~~~-~~~~~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~~------  221 (280)
                      +.++++ .+.++++|+++++++.+.+ +.+..+++|+|||++|   .++.++++++++|+++.+|.......++      
T Consensus       214 ~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~  293 (360)
T PLN02586        214 SSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVL  293 (360)
T ss_pred             eCCcchhhhHHHhCCCcEEEcCCCHHHHHhhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHh
Confidence            344444 3555789999888876532 2222357999999998   3788999999999999998654221111      


Q ss_pred             ----E--EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          222 ----F--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       222 ----~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                          .  ........++++++++++|++++.+   ++|+|+|+++|++.+++++..||+||.+
T Consensus       294 ~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~---~~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        294 GRKLVGGSDIGGIKETQEMLDFCAKHNITADI---ELIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             CCeEEEEcCcCCHHHHHHHHHHHHhCCCCCcE---EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence                1  1112347899999999999998755   3799999999999999999889999976

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=99.83  E-value=3.1e-19  Score=161.14  Aligned_cols=188  Identities=21%  Similarity=0.358  Sum_probs=142.9

Q ss_pred             ceeEEEEcc-c-CCC--ccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE--------
Q 023571           83 EMKAWLYGE-Y-GGV--DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV--------  150 (280)
Q Consensus        83 ~mka~~~~~-~-g~~--~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~--------  150 (280)
                      +||+|++.+ + |++  +.++++ +.+.|+|++|||+|||+++|||+.|++...+.     ...|.++|+|+        
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlVkv~a~~in~~~~~~~~~~-----~~~p~v~G~e~~G~V~~~~   75 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELV-EEELPPLKDGEVLCEALFLSVDPYMRPYSKRL-----NEGDTMIGTQVAKVIESKN   75 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEE-ecCCCCCCCCcEEEEEEEEecCHHHhcccccC-----CCCCcEecceEEEEEecCC
Confidence            599999988 4 454  789999 99999999999999999999999887632210     01122222222        


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        76 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~  155 (329)
T cd08294          76 SKFPVGTIVVASFGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGA  155 (329)
T ss_pred             CCCCCCCEEEeeCCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccH
Confidence                                                                                            


Q ss_pred             -----------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEEeCCC--CHHHHHhccccCC
Q 023571          151 -----------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG--QCDRAVKAIKEGG  206 (280)
Q Consensus       151 -----------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g--~~~~~l~~l~~gG  206 (280)
                                       +++.++++.++++++|++++++++++++.+.     .+++|+|||++|  .+..++++++++|
T Consensus       156 vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G  235 (329)
T cd08294         156 VGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFG  235 (329)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHhhccCC
Confidence                             5667889999999999999999998776543     257999999998  5789999999999


Q ss_pred             EEEEEcCCCC---C-----C---------ceEEEE---e----ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHH
Q 023571          207 TVVALTGAVT---P-----P---------GFRFVV---T----SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAF  262 (280)
Q Consensus       207 ~vV~~g~~~~---~-----~---------~~~~~~---~----~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~  262 (280)
                      +++.+|....   .     .         ...+..   .    ...+.++++++++++|.+++....  .|+++++.+|+
T Consensus       236 ~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~--~~~l~~~~~A~  313 (329)
T cd08294         236 RVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHV--TEGFENMPQAF  313 (329)
T ss_pred             EEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCccc--ccCHHHHHHHH
Confidence            9999874321   0     0         001111   0    113457889999999999876554  79999999999


Q ss_pred             HHHHhCCCCeeEEEEe
Q 023571          263 SYIETNKATGKVVIHP  278 (280)
Q Consensus       263 ~~l~~~~~~gkvVv~~  278 (280)
                      +.+++++..||+|+++
T Consensus       314 ~~~~~~~~~gkvvv~~  329 (329)
T cd08294         314 IGMLKGENTGKAIVKV  329 (329)
T ss_pred             HHHHcCCCCCeEEEeC
Confidence            9999999899999874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=99.83  E-value=3.2e-19  Score=164.89  Aligned_cols=123  Identities=17%  Similarity=0.201  Sum_probs=93.2

Q ss_pred             ecChh-hHHHHHhCCCCEEEeCCCCC-ccccCCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCceE------
Q 023571          153 TSSTR-NLEFLKSLGADLAIDYTKDN-FEDLPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGFR------  221 (280)
Q Consensus       153 ~~s~~-~~~~l~~lga~~vid~~~~~-~~~~~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~~------  221 (280)
                      +.+++ +.++++++|++++|++.+.. +.+..+++|+||||+|   .+..++++++++|+++.+|....+..++      
T Consensus       209 ~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~  288 (375)
T PLN02178        209 SRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVL  288 (375)
T ss_pred             eCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHh
Confidence            33434 46788889999999876531 2222357999999998   3789999999999999998654321111      


Q ss_pred             ----E--EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          222 ----F--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       222 ----~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                          +  ......+++.++++++++|++++.+   +.|+|+|+++|++.+++++..||+||++
T Consensus       289 ~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i---~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        289 GRKMVGGSQIGGMKETQEMLEFCAKHKIVSDI---ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             CCeEEEEeCccCHHHHHHHHHHHHhCCCcccE---EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence                1  1122357899999999999998765   3799999999999999999889999986

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=99.83  E-value=3.2e-19  Score=162.25  Aligned_cols=190  Identities=23%  Similarity=0.344  Sum_probs=143.6

Q ss_pred             eeEEEEcccCCCccEEEeeeccC----CCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE---------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTV----PQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV---------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~----p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~---------  150 (280)
                      +|++....+. ++.|+++ +.+.    |+|++|||||||+|+|||+.|++.+.|.++. ....|.++|+++         
T Consensus         8 ~~~~~~~~~~-~~~~~~~-~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~-~~~~p~~~g~~~~g~~~~~~v   84 (338)
T cd08295           8 LKAYVTGFPK-ESDLELR-TTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS-LYLPPFKPGEVITGYGVAKVV   84 (338)
T ss_pred             EecCCCCCCC-ccceEEE-EecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc-ccCCCcCCCCeEeccEEEEEE
Confidence            5666644333 4679999 8877    8899999999999999999999999885421 123345555432         


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        85 ~~~v~~~~vGd~V~~~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~v  164 (338)
T cd08295          85 DSGNPDFKVGDLVWGFTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAV  164 (338)
T ss_pred             ecCCCCCCCCCEEEecCCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHH
Confidence                                                                                            


Q ss_pred             ----------------EEecChhhHHHHHh-CCCCEEEeCCCC-Ccccc-----CCCccEEEeCCC--CHHHHHhccccC
Q 023571          151 ----------------AATSSTRNLEFLKS-LGADLAIDYTKD-NFEDL-----PEKFDVVYDAIG--QCDRAVKAIKEG  205 (280)
Q Consensus       151 ----------------~~~~s~~~~~~l~~-lga~~vid~~~~-~~~~~-----~~g~DvV~d~~g--~~~~~l~~l~~g  205 (280)
                                      +++.++++.+++++ +|+++++++.++ ++.+.     .+++|++||++|  .+..++++|+++
T Consensus       165 G~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~  244 (338)
T cd08295         165 GQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLH  244 (338)
T ss_pred             HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHHHHHhccC
Confidence                            45678899999998 999999998653 55432     258999999998  578999999999


Q ss_pred             CEEEEEcCCCCC--------Cc--------eEE---EEee----cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHH
Q 023571          206 GTVVALTGAVTP--------PG--------FRF---VVTS----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAF  262 (280)
Q Consensus       206 G~vV~~g~~~~~--------~~--------~~~---~~~~----~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~  262 (280)
                      |+++.+|.....        ..        +.+   ....    ..+.++++++++++|.+++....  .|+++++.+|+
T Consensus       245 G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~--~~~l~~~~~A~  322 (338)
T cd08295         245 GRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDI--ADGLESAPEAF  322 (338)
T ss_pred             cEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeec--ccCHHHHHHHH
Confidence            999999854311        00        011   1111    13557889999999999987654  69999999999


Q ss_pred             HHHHhCCCCeeEEEEe
Q 023571          263 SYIETNKATGKVVIHP  278 (280)
Q Consensus       263 ~~l~~~~~~gkvVv~~  278 (280)
                      +.+++++..||+|+++
T Consensus       323 ~~~~~~~~~GkvVl~~  338 (338)
T cd08295         323 VGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHhcCCCCceEEEEC
Confidence            9999999899999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PLN02740 Alcohol dehydrogenase-like

Probab=99.83  E-value=2.9e-19  Score=165.44  Aligned_cols=127  Identities=21%  Similarity=0.233  Sum_probs=95.3

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCC--cccc-----CCCccEEEeCCC---CHHHHHhccccC-CEEEEEcCCCCCCc
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDN--FEDL-----PEKFDVVYDAIG---QCDRAVKAIKEG-GTVVALTGAVTPPG  219 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~--~~~~-----~~g~DvV~d~~g---~~~~~l~~l~~g-G~vV~~g~~~~~~~  219 (280)
                      +++.+++++++++++|++++|++++.+  +.+.     .+++|+||||+|   .+..++++++++ |+++.+|....+..
T Consensus       228 ~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~  307 (381)
T PLN02740        228 GVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKM  307 (381)
T ss_pred             EEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCce
Confidence            345678899999999999999987643  4332     137999999999   478999999997 99999987643211


Q ss_pred             e-----------EEE--Ee-e--cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          220 F-----------RFV--VT-S--NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       220 ~-----------~~~--~~-~--~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      +           .+.  .. .  ....+.++++++.+|.+++....+++|+|+|+++|++.+++++. .|++|++
T Consensus       308 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        308 LPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             ecccHHHHhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence            1           111  11 1  13578999999999998764444569999999999999998865 5998863

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.83  E-value=1.2e-19  Score=157.37  Aligned_cols=127  Identities=23%  Similarity=0.384  Sum_probs=105.9

Q ss_pred             EEecChhhHHHHHh-CCCCEEEeCCCCCcccc-----CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCC---C---
Q 023571          151 AATSSTRNLEFLKS-LGADLAIDYTKDNFEDL-----PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAV---T---  216 (280)
Q Consensus       151 ~~~~s~~~~~~l~~-lga~~vid~~~~~~~~~-----~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~---~---  216 (280)
                      .+..+++|++++++ +|.|.+|||+++++.+.     .+|+|+.||++|  .++..+..|+..+|++.||...   .   
T Consensus       180 GiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~  259 (340)
T COG2130         180 GIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYNAPEL  259 (340)
T ss_pred             EecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhcCCCCC
Confidence            56788999999988 99999999999998765     379999999999  5899999999999999998754   1   


Q ss_pred             C---CceE-----------EEE-ee----cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          217 P---PGFR-----------FVV-TS----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       217 ~---~~~~-----------~~~-~~----~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                      +   ..+.           |.. ..    ..+.++++..|+++|+|+-..+.  +-+|+++.+||..|.+|+.+||+|++
T Consensus       260 ~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti--~dGlEnaP~Af~gLl~G~N~GK~vvK  337 (340)
T COG2130         260 PPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETI--VDGLENAPEAFIGLLSGKNFGKLVVK  337 (340)
T ss_pred             CCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeee--hhhhhccHHHHHHHhcCCccceEEEE
Confidence            1   1111           111 11    23788999999999999988865  77899999999999999999999999


Q ss_pred             eC
Q 023571          278 PI  279 (280)
Q Consensus       278 ~~  279 (280)
                      +.
T Consensus       338 v~  339 (340)
T COG2130         338 VA  339 (340)
T ss_pred             ec
Confidence            85

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=99.82  E-value=9.1e-19  Score=159.85  Aligned_cols=128  Identities=16%  Similarity=0.167  Sum_probs=97.0

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCccc---c--CCCcc-EEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCc--
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFED---L--PEKFD-VVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPG--  219 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~---~--~~g~D-vV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~--  219 (280)
                      +++.+++++++++++|+++++++++.+..+   .  .+++| +||||+|   .+..++++|+++|+++.+|.......  
T Consensus       190 ~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~  269 (347)
T PRK10309        190 AIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLT  269 (347)
T ss_pred             EECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccC
Confidence            344678899999999999999987654221   1  14788 9999999   47899999999999999986542110  


Q ss_pred             -----------eEE--EEee-----cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          220 -----------FRF--VVTS-----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       220 -----------~~~--~~~~-----~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                                 +.+  ....     ..+.++++++++++|.+++....++.|+|+|+++|++.+++++..||+|+++
T Consensus       270 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        270 SATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             hhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence                       011  1111     1477899999999999865444456899999999999999998889999975

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=99.82  E-value=1.9e-18  Score=158.66  Aligned_cols=125  Identities=17%  Similarity=0.224  Sum_probs=92.6

Q ss_pred             EecChhhHHHH-HhCCCCEEEeCCCCC-ccccCCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCce------
Q 023571          152 ATSSTRNLEFL-KSLGADLAIDYTKDN-FEDLPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF------  220 (280)
Q Consensus       152 ~~~s~~~~~~l-~~lga~~vid~~~~~-~~~~~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~------  220 (280)
                      ++.++++++.+ +++|+++++++.+.. +.+...++|++|||+|   .+..++++++++|+++.+|....+..+      
T Consensus       210 ~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~  289 (357)
T PLN02514        210 ISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLM  289 (357)
T ss_pred             EeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHh
Confidence            44555565444 569998888765432 2222357999999998   478999999999999999876432111      


Q ss_pred             ------EEEEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          221 ------RFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       221 ------~~~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                            .........++.++++++++|++++.+   +.|+|+|+.+|++.+++++..||+||++.
T Consensus       290 ~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~i---~~~~l~~~~~A~~~~~~~~~~gk~v~~~~  351 (357)
T PLN02514        290 LGRKVITGSFIGSMKETEEMLEFCKEKGLTSMI---EVVKMDYVNTAFERLEKNDVRYRFVVDVA  351 (357)
T ss_pred             hCCcEEEEEecCCHHHHHHHHHHHHhCCCcCcE---EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence                  111222446899999999999987654   27999999999999999998899999874

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.81  E-value=2.2e-18  Score=155.63  Aligned_cols=192  Identities=23%  Similarity=0.366  Sum_probs=151.6

Q ss_pred             ceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE------------
Q 023571           83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV------------  150 (280)
Q Consensus        83 ~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~------------  150 (280)
                      +||++.+.++|.+..++++ +.+.|.++++||+|+|.++|+|++|+++..|.++.  ..+|.++|+|+            
T Consensus         1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~vG~~v~   77 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAV-EFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP--PSLPSGLGTEAAGVVSKVGSGVK   77 (327)
T ss_pred             CceEEEEeccCChhHeEEe-eccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC--CCCCCccCcceEEEEEEeCCCCC
Confidence            4999999999888889999 89999999999999999999999999998887642  23455666665            


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        78 ~~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~  157 (327)
T PRK10754         78 HIKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIA  157 (327)
T ss_pred             CCCCCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHH
Confidence                                                                                            


Q ss_pred             ------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEE
Q 023571          151 ------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVA  210 (280)
Q Consensus       151 ------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~  210 (280)
                                  +++.++++.++++++|++++++++..++.+.      .+++|++|||+|  .+..++++++++|++|.
T Consensus       158 ~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~  237 (327)
T PRK10754        158 CQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVS  237 (327)
T ss_pred             HHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEE
Confidence                        4667788889999999999998877665432      257999999998  57889999999999999


Q ss_pred             EcCCCCC---Cce--------EEEEe-----------ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhC
Q 023571          211 LTGAVTP---PGF--------RFVVT-----------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETN  268 (280)
Q Consensus       211 ~g~~~~~---~~~--------~~~~~-----------~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~  268 (280)
                      +|.....   ...        .+...           ...+.+.++++++++|.+++....++.|+++++.+|++.+.++
T Consensus       238 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~  317 (327)
T PRK10754        238 FGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESR  317 (327)
T ss_pred             EccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcC
Confidence            9865321   110        11111           1124466789999999998654334689999999999999999


Q ss_pred             CCCeeEEEE
Q 023571          269 KATGKVVIH  277 (280)
Q Consensus       269 ~~~gkvVv~  277 (280)
                      +..+|+||.
T Consensus       318 ~~~~~~~~~  326 (327)
T PRK10754        318 ATQGSSLLI  326 (327)
T ss_pred             CCcceEEEe
Confidence            988999986

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=99.81  E-value=3e-18  Score=156.87  Aligned_cols=194  Identities=21%  Similarity=0.282  Sum_probs=143.6

Q ss_pred             ccceeEEEEcc-c-CC--CccEEEeee---ccCC-CCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCc--eE
Q 023571           81 PSEMKAWLYGE-Y-GG--VDVLKFDEK---VTVP-QVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGY--DV  150 (280)
Q Consensus        81 p~~mka~~~~~-~-g~--~~~l~l~~~---~~~p-~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~--e~  150 (280)
                      +.++|.+++.+ + |.  ++.|++. +   .+.| ++++|||||||.|+++|+.|+..+.+..+  ....|.++|+  |+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~f~~~-~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~--~~~~p~~~G~~~~~   82 (348)
T PLN03154          6 VVENKQVILKNYIDGIPKETDMEVK-LGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD--SYLPPFVPGQRIEG   82 (348)
T ss_pred             cccceEEEEecCCCCCCCcccEEEE-eecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC--CCCCCcCCCCeeEe
Confidence            34467888754 3 22  3669999 5   3555 35899999999999999999876544222  1234666775  33


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        83 ~G~v~~vg~~v~~~~~Gd~V~~~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~V  162 (348)
T PLN03154         83 FGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSV  162 (348)
T ss_pred             eEEEEEEecCCCCCCCCCEEEecCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEE
Confidence                                                                                            


Q ss_pred             -------------------------EEecChhhHHHHH-hCCCCEEEeCCCC-Ccccc-----CCCccEEEeCCC--CHH
Q 023571          151 -------------------------AATSSTRNLEFLK-SLGADLAIDYTKD-NFEDL-----PEKFDVVYDAIG--QCD  196 (280)
Q Consensus       151 -------------------------~~~~s~~~~~~l~-~lga~~vid~~~~-~~~~~-----~~g~DvV~d~~g--~~~  196 (280)
                                               +++.+++++++++ ++|++++||++++ ++.+.     .+++|++|||+|  .+.
T Consensus       163 lV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~  242 (348)
T PLN03154        163 FVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLD  242 (348)
T ss_pred             EEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHHHHH
Confidence                                     4557788999997 7999999999864 54432     257999999998  578


Q ss_pred             HHHhccccCCEEEEEcCCCCCC--------c--------eEEEEee-------cHHHHHHHHHHHHCCCceeecCCCccc
Q 023571          197 RAVKAIKEGGTVVALTGAVTPP--------G--------FRFVVTS-------NGEVLKKLNPYLESGKVKPIIDPKGPF  253 (280)
Q Consensus       197 ~~l~~l~~gG~vV~~g~~~~~~--------~--------~~~~~~~-------~~~~l~~l~~ll~~G~l~~~~~~~~~~  253 (280)
                      .++++++++|+++.+|......        .        +.+....       ..+.++++++++++|++++.+..  +|
T Consensus       243 ~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~--~~  320 (348)
T PLN03154        243 AALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDM--SE  320 (348)
T ss_pred             HHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceec--cc
Confidence            9999999999999998653110        0        0011000       13568889999999999987654  89


Q ss_pred             chhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          254 PFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       254 ~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      +|+++.+|++.+++++..||+||++.
T Consensus       321 ~L~~~~~A~~~l~~g~~~GKvVl~~~  346 (348)
T PLN03154        321 GLESAPAALVGLFSGKNVGKQVIRVA  346 (348)
T ss_pred             CHHHHHHHHHHHHcCCCCceEEEEec
Confidence            99999999999999999999999874

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=99.81  E-value=9.4e-19  Score=161.23  Aligned_cols=126  Identities=20%  Similarity=0.269  Sum_probs=95.0

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCC--Ccccc-----CCCccEEEeCCC---CHHHHHhccccC-CEEEEEcCCCC--C
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKD--NFEDL-----PEKFDVVYDAIG---QCDRAVKAIKEG-GTVVALTGAVT--P  217 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~--~~~~~-----~~g~DvV~d~~g---~~~~~l~~l~~g-G~vV~~g~~~~--~  217 (280)
                      +++.+++++++++++|++++|++.+.  ++.+.     .+++|+||||+|   .+..++++++++ |+++.+|....  .
T Consensus       216 ~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~  295 (368)
T cd08300         216 GIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQE  295 (368)
T ss_pred             EEeCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCc
Confidence            45578889999999999999998764  34332     147999999998   478999999987 99999986531  1


Q ss_pred             Cce-----------E-EEE--eecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          218 PGF-----------R-FVV--TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       218 ~~~-----------~-~~~--~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                      ..+           . +..  ....+.+.++++++++|++++....+++|+|+|+.+|++.+++++. .|++|+
T Consensus       296 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         296 ISTRPFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             cccCHHHHhhcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence            110           0 011  1235788999999999999875444569999999999999988765 688874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=99.81  E-value=2.5e-18  Score=155.53  Aligned_cols=177  Identities=21%  Similarity=0.369  Sum_probs=137.7

Q ss_pred             CCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE----------------------
Q 023571           93 GGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV----------------------  150 (280)
Q Consensus        93 g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~----------------------  150 (280)
                      ..++.+++. +.+.|+|++|||||||.|+|+|+.|++   |.++  ....|.++|+|+                      
T Consensus        14 ~~~~~l~~~-~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~--~~~~~~i~G~~~~g~v~~~~~~~~~GdrV~~~~~   87 (325)
T TIGR02825        14 PTDSDFELK-TVELPPLNNGEVLLEALFLSVDPYMRV---AAKR--LKEGDTMMGQQVARVVESKNVALPKGTIVLASPG   87 (325)
T ss_pred             CCCCceEEE-eccCCCCCCCcEEEEEEEEecCHHHhc---ccCc--CCCCCcEecceEEEEEEeCCCCCCCCCEEEEecC
Confidence            345779999 899999999999999999999997654   4332  112367888888                      


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        88 ~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi  167 (325)
T TIGR02825        88 WTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVV  167 (325)
T ss_pred             ceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEE
Confidence                                                                                            


Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCC-Ccccc-----CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCC------
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKD-NFEDL-----PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVT------  216 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~-~~~~~-----~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~------  216 (280)
                      +++.++++.++++++|+++++++++. .+.+.     .+++|+||||+|  .+..++++++++|+++.+|....      
T Consensus       168 ~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~  247 (325)
T TIGR02825       168 GAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGP  247 (325)
T ss_pred             EEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcccCCC
Confidence            56678899999999999999999874 44332     257999999998  57899999999999999985321      


Q ss_pred             -CC----------ceEE--EE-ee-----cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          217 -PP----------GFRF--VV-TS-----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       217 -~~----------~~~~--~~-~~-----~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                       +.          .+.+  .. ..     ..+.++++++++++|++++....  .|+|+++.+|++.+++++..||+|++
T Consensus       248 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~--~~~l~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       248 LPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYV--IEGFENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             CCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceec--cccHHHHHHHHHHHhcCCCCCeEEeC
Confidence             10          0111  11 01     13578899999999999987654  78999999999999999988999973

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=99.81  E-value=3.8e-18  Score=153.57  Aligned_cols=190  Identities=18%  Similarity=0.296  Sum_probs=149.8

Q ss_pred             eeEEEEcccCCC-ccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE------------
Q 023571           84 MKAWLYGEYGGV-DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV------------  150 (280)
Q Consensus        84 mka~~~~~~g~~-~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~------------  150 (280)
                      |||+++.+++.+ +.+++. +.+.|.+.++||+|+|.++++|+.|++.+.|.++. ....|.++|||+            
T Consensus         1 m~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~-~~~~p~~~G~e~~G~V~~~G~~v~   78 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIG-EVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY-KPELPAIGGSEAVGVVDAVGEGVK   78 (324)
T ss_pred             CeeEEEccCCChhHeEEEe-ecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC-CCCCCCCCCcceEEEEEEeCCCCC
Confidence            799999877765 458899 99999999999999999999999999999887652 234577788877            


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~  158 (324)
T cd08292          79 GLQVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAM  158 (324)
T ss_pred             CCCCCCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHhhCCCCCCEEEEcccccHHHHHHHH
Confidence                                                                                            


Q ss_pred             ----------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEEc
Q 023571          151 ----------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALT  212 (280)
Q Consensus       151 ----------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g  212 (280)
                                +++.++++.++++++|+++++++++.++.+.      .+++|+||||+|  .+..++++++++|+++.+|
T Consensus       159 ~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g  238 (324)
T cd08292         159 LAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFG  238 (324)
T ss_pred             HHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEe
Confidence                      5667788888888899999999887665432      257999999998  5789999999999999998


Q ss_pred             CCCC-CC----------ceEEEEee------------cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCC
Q 023571          213 GAVT-PP----------GFRFVVTS------------NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK  269 (280)
Q Consensus       213 ~~~~-~~----------~~~~~~~~------------~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~  269 (280)
                      .... ..          ...+....            ..+.++++++++++|.+++.+.  +.|+++++.+|++.+.+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~--~~~~~~~~~~a~~~~~~~~  316 (324)
T cd08292         239 SMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVE--AVFDLGDAAKAAAASMRPG  316 (324)
T ss_pred             cCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccc--cEecHHHHHHHHHHHHcCC
Confidence            6421 11          11111100            1356888999999999986543  5899999999999999888


Q ss_pred             CCeeEEEE
Q 023571          270 ATGKVVIH  277 (280)
Q Consensus       270 ~~gkvVv~  277 (280)
                      ..+|+|++
T Consensus       317 ~~~kvvv~  324 (324)
T cd08292         317 RAGKVLLR  324 (324)
T ss_pred             CCceEEeC
Confidence            88898874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PLN02827 Alcohol dehydrogenase-like

Probab=99.81  E-value=1.3e-18  Score=161.06  Aligned_cols=125  Identities=17%  Similarity=0.194  Sum_probs=95.5

Q ss_pred             ecChhhHHHHHhCCCCEEEeCCCC--Ccccc-----CCCccEEEeCCC---CHHHHHhccccC-CEEEEEcCCCCCCceE
Q 023571          153 TSSTRNLEFLKSLGADLAIDYTKD--NFEDL-----PEKFDVVYDAIG---QCDRAVKAIKEG-GTVVALTGAVTPPGFR  221 (280)
Q Consensus       153 ~~s~~~~~~l~~lga~~vid~~~~--~~~~~-----~~g~DvV~d~~g---~~~~~l~~l~~g-G~vV~~g~~~~~~~~~  221 (280)
                      +.++++.++++++|++++|++++.  ++.+.     .+++|+||||+|   .+..++++++++ |+++.+|.......+.
T Consensus       225 ~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~  304 (378)
T PLN02827        225 DINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVS  304 (378)
T ss_pred             CCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCcccc
Confidence            358889999999999999998752  33332     247999999999   378999999998 9999998764221111


Q ss_pred             -----------EE--Ee---ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          222 -----------FV--VT---SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       222 -----------~~--~~---~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                                 +.  ..   ....+++++++++++|++++....+++|+|+|+.+|++.+++++. +|+||.+
T Consensus       305 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~  376 (378)
T PLN02827        305 AHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHM  376 (378)
T ss_pred             ccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEe
Confidence                       00  00   123578899999999999974333468999999999999998876 6999976

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=99.81  E-value=1.7e-18  Score=160.91  Aligned_cols=123  Identities=16%  Similarity=0.241  Sum_probs=85.7

Q ss_pred             cChhhHHHHHhCCCCEEEeCC-CCCcccc------CCCccEEEeCCC-----------------CHHHHHhccccCCEEE
Q 023571          154 SSTRNLEFLKSLGADLAIDYT-KDNFEDL------PEKFDVVYDAIG-----------------QCDRAVKAIKEGGTVV  209 (280)
Q Consensus       154 ~s~~~~~~l~~lga~~vid~~-~~~~~~~------~~g~DvV~d~~g-----------------~~~~~l~~l~~gG~vV  209 (280)
                      .+++++++++++|++. +++. +.++.+.      .+++|++|||+|                 .++.++++++++|+++
T Consensus       218 ~~~~r~~~a~~~Ga~~-v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~  296 (393)
T TIGR02819       218 LNPARLAQARSFGCET-VDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIG  296 (393)
T ss_pred             CCHHHHHHHHHcCCeE-EecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEE
Confidence            4566788888888864 5543 3333321      247999999998                 2788999999999999


Q ss_pred             EEcCCC--CCCce---------EEE----------E----eecHHHHHHHHHHHHCCCceeecCCC-cccchhhHHHHHH
Q 023571          210 ALTGAV--TPPGF---------RFV----------V----TSNGEVLKKLNPYLESGKVKPIIDPK-GPFPFSQVVEAFS  263 (280)
Q Consensus       210 ~~g~~~--~~~~~---------~~~----------~----~~~~~~l~~l~~ll~~G~l~~~~~~~-~~~~l~~v~~A~~  263 (280)
                      .+|...  .....         .+.          +    ....+.+.++++++++|++++....+ +.|+|+|+++||+
T Consensus       297 ~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~  376 (393)
T TIGR02819       297 IPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYA  376 (393)
T ss_pred             EeeecCCcccccccccccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHH
Confidence            999863  11110         000          0    00113346899999999997643333 5899999999999


Q ss_pred             HHHhCCCCeeEEEEe
Q 023571          264 YIETNKATGKVVIHP  278 (280)
Q Consensus       264 ~l~~~~~~gkvVv~~  278 (280)
                      .+.+++. +|++|++
T Consensus       377 ~~~~~~~-~Kvvi~~  390 (393)
T TIGR02819       377 EFDAGAA-KKFVIDP  390 (393)
T ss_pred             HHhhCCc-eEEEEeC
Confidence            9998754 8999875

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=99.80  E-value=2.1e-18  Score=159.00  Aligned_cols=127  Identities=18%  Similarity=0.249  Sum_probs=93.7

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCC--CCcccc-----CCCccEEEeCCC---CHHHHHhccccC-CEEEEEcCCCC--C
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTK--DNFEDL-----PEKFDVVYDAIG---QCDRAVKAIKEG-GTVVALTGAVT--P  217 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~--~~~~~~-----~~g~DvV~d~~g---~~~~~l~~l~~g-G~vV~~g~~~~--~  217 (280)
                      +++.+++++++++++|+++++|+.+  +++.+.     .+++|++|||+|   .+..++++++++ |+++.+|....  .
T Consensus       215 ~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~  294 (368)
T TIGR02818       215 AIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQE  294 (368)
T ss_pred             EEcCCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCc
Confidence            3456788999999999999998874  223221     147999999998   478999999986 99999986531  1


Q ss_pred             Cce---E------E--EEe---ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          218 PGF---R------F--VVT---SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       218 ~~~---~------~--~~~---~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      ..+   .      +  ...   .....+.++++++++|++++....++.|+|+|+.+|++.+++++. .|++|+.
T Consensus       295 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       295 ISTRPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             ccccHHHHhccceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence            111   0      0  000   124678999999999998765444579999999999999988764 6998863

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=99.80  E-value=2.1e-18  Score=158.02  Aligned_cols=119  Identities=21%  Similarity=0.281  Sum_probs=87.2

Q ss_pred             ChhhHHHHHhCCCCEEEeCCCCCccc--cCCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCC--CCceE------
Q 023571          155 STRNLEFLKSLGADLAIDYTKDNFED--LPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVT--PPGFR------  221 (280)
Q Consensus       155 s~~~~~~l~~lga~~vid~~~~~~~~--~~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~--~~~~~------  221 (280)
                      +++|+++++++|++. +++.++++.+  ..+++|+||||+|   .+..++++++++|+++.+|....  ...+.      
T Consensus       208 ~~~~~~~~~~~Ga~~-v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~  286 (355)
T cd08230         208 PDPKADIVEELGATY-VNSSKTPVAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNR  286 (355)
T ss_pred             CHHHHHHHHHcCCEE-ecCCccchhhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhh
Confidence            578889999999986 5776655432  2357999999999   37899999999999999987553  11111      


Q ss_pred             -E---------EEeecHHHHHHHHHHHHCCC------ceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          222 -F---------VVTSNGEVLKKLNPYLESGK------VKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       222 -~---------~~~~~~~~l~~l~~ll~~G~------l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                       +         ......++++++++++.++.      +++.+.  ++|+|+|+.+|++.++++.  +|+||++
T Consensus       287 ~~~~k~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~--~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         287 DLVLGNKALVGSVNANKRHFEQAVEDLAQWKYRWPGVLERLIT--RRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             hHhhcCcEEEEecCCchhhHHHHHHHHHhcccccccchHHhee--eeecHHHHHHHHHhcccCC--eEEEeeC
Confidence             0         11123467888999998876      343333  5899999999999987654  5999864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=99.79  E-value=4.4e-18  Score=155.48  Aligned_cols=126  Identities=22%  Similarity=0.307  Sum_probs=97.2

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCccccC------CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCce-
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF-  220 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~-  220 (280)
                      +++.++++.++++++|++.++++++.++.+.+      +++|+||||+|   .+..++++|+++|+++.+|....+..+ 
T Consensus       202 ~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  281 (351)
T cd08233         202 VSEPSEARRELAEELGATIVLDPTEVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFN  281 (351)
T ss_pred             EECCCHHHHHHHHHhCCCEEECCCccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccC
Confidence            34467888888888999999999887765432      46999999997   478999999999999999876532211 


Q ss_pred             ---------E--EEEeecHHHHHHHHHHHHCCCceeecCCCcccchhhH-HHHHHHHHhCCCC-eeEEE
Q 023571          221 ---------R--FVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQV-VEAFSYIETNKAT-GKVVI  276 (280)
Q Consensus       221 ---------~--~~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v-~~A~~~l~~~~~~-gkvVv  276 (280)
                               .  .......++++++.+++++|.+++....+++|+++|+ ++|++.+.+++.. ||+||
T Consensus       282 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         282 PNDLVLKEKTLTGSICYTREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             HHHHHhhCcEEEEEeccCcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence                     1  1112245789999999999999754333358999996 7999999999874 99987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=99.79  E-value=2.2e-18  Score=158.66  Aligned_cols=125  Identities=14%  Similarity=0.166  Sum_probs=92.5

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCC--Ccccc-----CCCccEEEeCCC---CHHHHHhccccC-CEEEEEcCCCCCCc
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKD--NFEDL-----PEKFDVVYDAIG---QCDRAVKAIKEG-GTVVALTGAVTPPG  219 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~--~~~~~-----~~g~DvV~d~~g---~~~~~l~~l~~g-G~vV~~g~~~~~~~  219 (280)
                      +++.++++.++++++|++.++++.+.  .+.+.     .+++|++|||+|   .+..++++++++ |+++.+|....+..
T Consensus       217 ~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~  296 (369)
T cd08301         217 GVDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAV  296 (369)
T ss_pred             EEcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcc
Confidence            44567888899999999999988752  33221     247999999998   378999999996 99999987642111


Q ss_pred             --e---------EEEE-----eecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 023571          220 --F---------RFVV-----TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI  276 (280)
Q Consensus       220 --~---------~~~~-----~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv  276 (280)
                        +         .+..     ...+..++++++++++|.++.....+++|+|+|+.+|++.+++++. .|+||
T Consensus       297 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~~  368 (369)
T cd08301         297 FSTHPMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGEC-LRCIL  368 (369)
T ss_pred             cccCHHHHhcCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCc-eeEEe
Confidence              1         1111     0124578899999999998764434468999999999999999886 48876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=99.79  E-value=3.4e-18  Score=156.37  Aligned_cols=127  Identities=18%  Similarity=0.298  Sum_probs=96.3

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCC---cccc------CCCcc----EEEeCCC---CHHHHHhccccCCEEEEEcCC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDN---FEDL------PEKFD----VVYDAIG---QCDRAVKAIKEGGTVVALTGA  214 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~---~~~~------~~g~D----vV~d~~g---~~~~~l~~l~~gG~vV~~g~~  214 (280)
                      +++.+++++++++++|++++|++.+.+   +.+.      .+|+|    +||||+|   .++.++++++++|+++.+|..
T Consensus       195 ~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~  274 (349)
T TIGR03201       195 AIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYT  274 (349)
T ss_pred             EEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcC
Confidence            456788999999999999999987643   2221      13665    8999999   367899999999999999876


Q ss_pred             CCCCceE----------E--EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          215 VTPPGFR----------F--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       215 ~~~~~~~----------~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      .....+.          .  ......+.++++++++++|++++.... ..|+|+|+++||+.+++++..||+++++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       275 MAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             CCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCCCcccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence            5322111          1  111245689999999999999764333 2689999999999999999889998863

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.79  E-value=1.1e-17  Score=151.91  Aligned_cols=186  Identities=23%  Similarity=0.323  Sum_probs=142.7

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++..++..  ++++ +.+.|.++++||+|+|.++|+|++|++...|.++..  ..|.++|||+             
T Consensus         1 m~a~~~~~~~~~--~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~v~~vG~~v~~   75 (333)
T cd08296           1 YKAVQVTEPGGP--LELV-ERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGL--SYPRVPGHEVVGRIDAVGEGVSR   75 (333)
T ss_pred             CeEEEEccCCCC--ceEE-eccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCC--CCCcccCcceeEEEEEECCCCcc
Confidence            799999877543  8888 999999999999999999999999999887754210  1111111111             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        76 ~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~  155 (333)
T cd08296          76 WKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNA  155 (333)
T ss_pred             CCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHH
Confidence                                                                                            


Q ss_pred             ------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc---CCCccEEEeC
Q 023571          151 ------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL---PEKFDVVYDA  191 (280)
Q Consensus       151 ------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~---~~g~DvV~d~  191 (280)
                                                          +++.+++++++++++|+++++++...++...   .+++|+++|+
T Consensus       156 ~~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~d~vi~~  235 (333)
T cd08296         156 LRNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAKLILAT  235 (333)
T ss_pred             HHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCCCCEEEEC
Confidence                                                5667778899999999999999887665432   2579999999


Q ss_pred             CC---CHHHHHhccccCCEEEEEcCCCCCCce----------EE--EEeecHHHHHHHHHHHHCCCceeecCCCcccchh
Q 023571          192 IG---QCDRAVKAIKEGGTVVALTGAVTPPGF----------RF--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFS  256 (280)
Q Consensus       192 ~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~----------~~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~  256 (280)
                      .|   .+..++++++++|+++.+|.......+          .+  ........++.++++++++.+++.+   ..|+++
T Consensus       236 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~v---~~~~~~  312 (333)
T cd08296         236 APNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMV---ETFPLE  312 (333)
T ss_pred             CCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCceE---EEEEHH
Confidence            86   578999999999999999875422111          11  1122457888999999999988653   379999


Q ss_pred             hHHHHHHHHHhCCCCeeEEEE
Q 023571          257 QVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       257 ~v~~A~~~l~~~~~~gkvVv~  277 (280)
                      ++.+|++.++.++.+||+||+
T Consensus       313 ~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         313 KANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHHHHHHHHCCCCceeEEeC
Confidence            999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=99.78  E-value=2.2e-17  Score=149.16  Aligned_cols=193  Identities=24%  Similarity=0.351  Sum_probs=150.8

Q ss_pred             ceeEEEEcccCC--CccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE----------
Q 023571           83 EMKAWLYGEYGG--VDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV----------  150 (280)
Q Consensus        83 ~mka~~~~~~g~--~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~----------  150 (280)
                      .|||+++.+++.  ++.++++ +.+.|.+.++||+|+|.++|+|+.|++...|.++. ...+|.++|+|+          
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~-~~~~p~~~g~e~~G~v~~vG~~   78 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIV-DVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDP-GVKPPFDCGFEGVGEVVAVGEG   78 (329)
T ss_pred             CceEEEeccCCCCcccCceEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCC-CCCCCcccCceeEEEEEEECCC
Confidence            499999999887  6778999 89999999999999999999999999998887642 235677788777          


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 v~~~~~Gd~V~~~~~g~~~s~~~v~~~~~~~ip~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~  158 (329)
T cd08250          79 VTDFKVGDAVATMSFGAFAEYQVVPARHAVPVPELKPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQ  158 (329)
T ss_pred             CCCCCCCCEEEEecCcceeEEEEechHHeEECCCCcchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHH
Confidence                                                                                            


Q ss_pred             ----------EEecChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEEeCCC--CHHHHHhccccCCEEEEEcC
Q 023571          151 ----------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTG  213 (280)
Q Consensus       151 ----------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~  213 (280)
                                +++.++++.++++++|++.++++...++...     .+++|++|||+|  .+..++++++++|++|.+|.
T Consensus       159 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~  238 (329)
T cd08250         159 LAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGF  238 (329)
T ss_pred             HHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHHHHHHHHHHhccCCeEEEEec
Confidence                      4566778888998999999988776554321     257999999998  57899999999999999976


Q ss_pred             CCCC-----------C---------ceEEEEee-------cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHH
Q 023571          214 AVTP-----------P---------GFRFVVTS-------NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIE  266 (280)
Q Consensus       214 ~~~~-----------~---------~~~~~~~~-------~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~  266 (280)
                      ....           .         ...+....       ..+.+.++++++++|.+++....++.|+++++++|++.+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~  318 (329)
T cd08250         239 ISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLY  318 (329)
T ss_pred             ccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHH
Confidence            4311           0         01111110       2456788999999999987544334699999999999999


Q ss_pred             hCCCCeeEEEE
Q 023571          267 TNKATGKVVIH  277 (280)
Q Consensus       267 ~~~~~gkvVv~  277 (280)
                      +++..+|+|++
T Consensus       319 ~~~~~~kvvv~  329 (329)
T cd08250         319 SGKNIGKVVVE  329 (329)
T ss_pred             cCCCCceEEeC
Confidence            98888898874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08293 PTGR2 Prostaglandin reductase

Probab=99.78  E-value=1.6e-17  Score=151.16  Aligned_cols=181  Identities=23%  Similarity=0.338  Sum_probs=136.1

Q ss_pred             CccEEEeeeccCCCCC-CCcEEEEEEEEecChHHHHHHcCCCC-CCCCCCCcccCceE----------------------
Q 023571           95 VDVLKFDEKVTVPQVK-EDQVLIKVVAAALNPVDGKRRQGKFK-ATDSPLPTVPGYDV----------------------  150 (280)
Q Consensus        95 ~~~l~l~~~~~~p~~~-~~eVlVkV~aagl~~~D~~~~~g~~~-~~~~~~P~i~G~e~----------------------  150 (280)
                      ++.+++. +.+.|+|. +|||||||+|+|||+.|+........ .....+|.++|+|+                      
T Consensus        20 ~~~~~~~-~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~   98 (345)
T cd08293          20 AENFRVE-ECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTS   98 (345)
T ss_pred             ccceEEE-eccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEe
Confidence            3679999 99999974 99999999999999999754321110 01124567788888                      


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        99 ~~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~  178 (345)
T cd08293          99 FNWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLL  178 (345)
T ss_pred             cCCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHc
Confidence                                                                                            


Q ss_pred             ------EEecChhhHHHHHh-CCCCEEEeCCCCCcccc-----CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCC
Q 023571          151 ------AATSSTRNLEFLKS-LGADLAIDYTKDNFEDL-----PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVT  216 (280)
Q Consensus       151 ------~~~~s~~~~~~l~~-lga~~vid~~~~~~~~~-----~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~  216 (280)
                            +++.++++.+++++ +|++++++++++++.+.     .+++|+||||+|  .+..++++|+++|++|.+|....
T Consensus       179 G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~  258 (345)
T cd08293         179 GCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQ  258 (345)
T ss_pred             CCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccCCEEEEEeeeec
Confidence                  45567888899876 99999999988776543     258999999998  57899999999999999984210


Q ss_pred             --------C------------CceEEE---Eee----cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCC
Q 023571          217 --------P------------PGFRFV---VTS----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK  269 (280)
Q Consensus       217 --------~------------~~~~~~---~~~----~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~  269 (280)
                              .            ..+.+.   ...    ..+.++++++++++|.+++....  .++++++.+|++.+++++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~--~~~l~~~~~A~~~~~~~~  336 (345)
T cd08293         259 YNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETV--YEGLENAGEAFQSMMNGG  336 (345)
T ss_pred             ccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccceeEE--eecHHHHHHHHHHHhcCC
Confidence                    0            011110   011    13567888899999999876543  569999999999999998


Q ss_pred             CCeeEEEEe
Q 023571          270 ATGKVVIHP  278 (280)
Q Consensus       270 ~~gkvVv~~  278 (280)
                      ..||+|+++
T Consensus       337 ~~gkvvl~~  345 (345)
T cd08293         337 NIGKQIVKV  345 (345)
T ss_pred             CCCeEEEEC
Confidence            889999874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=99.77  E-value=1.2e-17  Score=152.36  Aligned_cols=183  Identities=16%  Similarity=0.215  Sum_probs=126.2

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCC--CCCCCcccCceE-----------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT--DSPLPTVPGYDV-----------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~--~~~~P~i~G~e~-----------  150 (280)
                      .|++++..++   .++++ +.+.|. ++|||+|||+++|||++|+++++|.++..  ...+|.++|||+           
T Consensus         3 ~~~~~~~~~~---~~~~~-~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~~   77 (341)
T cd08237           3 NQVYRLVRPK---FFEVT-YEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTGT   77 (341)
T ss_pred             ccceEEeccc---eEEEe-ecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCCc
Confidence            4677776554   48998 899995 99999999999999999999999976311  135788999988           


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        78 ~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~~~a~~a~~~~~  157 (341)
T cd08237          78 YKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELVSVGVHAISRFE  157 (341)
T ss_pred             cCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhhchHHHHHHHHHHHh
Confidence                                                                                            


Q ss_pred             ------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccCCCccEEEeCCC-
Q 023571          151 ------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG-  193 (280)
Q Consensus       151 ------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~~g~DvV~d~~g-  193 (280)
                                                          +++.+++|++++++++++..++    ++.+. .++|+||||+| 
T Consensus       158 ~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~----~~~~~-~g~d~viD~~G~  232 (341)
T cd08237         158 QIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID----DIPED-LAVDHAFECVGG  232 (341)
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh----hhhhc-cCCcEEEECCCC
Confidence                                                2334444555555444433221    11111 26999999998 


Q ss_pred             -----CHHHHHhccccCCEEEEEcCCCCCCce----------EE--EEeecHHHHHHHHHHHHCC-----CceeecCCCc
Q 023571          194 -----QCDRAVKAIKEGGTVVALTGAVTPPGF----------RF--VVTSNGEVLKKLNPYLESG-----KVKPIIDPKG  251 (280)
Q Consensus       194 -----~~~~~l~~l~~gG~vV~~g~~~~~~~~----------~~--~~~~~~~~l~~l~~ll~~G-----~l~~~~~~~~  251 (280)
                           .++.++++++++|+++.+|....+..+          .+  ......++++++++++++|     .+++.+.  +
T Consensus       233 ~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~--~  310 (341)
T cd08237         233 RGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPEVAEYLRKLVG--G  310 (341)
T ss_pred             CccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCCcccCChHHHhc--c
Confidence                 278999999999999999865422111          11  1122357799999999999     3444444  5


Q ss_pred             ccch---hhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          252 PFPF---SQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       252 ~~~l---~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      .|+|   +++.+|++.+.++ ..||+||++.
T Consensus       311 ~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~  340 (341)
T cd08237         311 VFPVRSINDIHRAFESDLTN-SWGKTVMEWE  340 (341)
T ss_pred             ccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence            7887   5666666666554 6799999864

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>PRK10083 putative oxidoreductase; Provisional

Probab=99.76  E-value=4.2e-17  Score=148.11  Aligned_cols=190  Identities=21%  Similarity=0.261  Sum_probs=142.3

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++.+++   .+++. +.+.|.|+++||+|||.++|+|++|++.+.|.++.  ..+|.++|||+             
T Consensus         1 m~a~~~~~~~---~~~~~-~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~~   74 (339)
T PRK10083          1 MKSIVIEKPN---SLAIE-ERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF--AKYPRVIGHEFFGVIDAVGEGVDA   74 (339)
T ss_pred             CeEEEEecCC---eeEEE-eccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc--CCCCcccccceEEEEEEECCCCcc
Confidence            7899987654   48899 99999999999999999999999999998876531  12233333333             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~~~a~~~~~  154 (339)
T PRK10083         75 ARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTG  154 (339)
T ss_pred             CCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHhhhchHHHHHHHHH
Confidence                                                                                            


Q ss_pred             ------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC----CCccEEEe
Q 023571          151 ------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP----EKFDVVYD  190 (280)
Q Consensus       151 ------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~----~g~DvV~d  190 (280)
                                                          ++..++++.++++++|+++++++++.++.+.+    .++|++||
T Consensus       155 ~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~vid  234 (339)
T PRK10083        155 RTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPTLIID  234 (339)
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCCEEEE
Confidence                                                34456788888899999999998776554432    24679999


Q ss_pred             CCC---CHHHHHhccccCCEEEEEcCCCCCCce----------EE-EEeecHHHHHHHHHHHHCCCceeecCCCcccchh
Q 023571          191 AIG---QCDRAVKAIKEGGTVVALTGAVTPPGF----------RF-VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFS  256 (280)
Q Consensus       191 ~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~----------~~-~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~  256 (280)
                      |+|   .+..++++|+++|+++.+|.......+          .+ ......+.++++++++++|.+++....++.|+++
T Consensus       235 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~  314 (339)
T PRK10083        235 AACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHTFDFQ  314 (339)
T ss_pred             CCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeeeecHH
Confidence            998   478999999999999999865421111          11 1112457899999999999998742222589999


Q ss_pred             hHHHHHHHHHhCC-CCeeEEEEeC
Q 023571          257 QVVEAFSYIETNK-ATGKVVIHPI  279 (280)
Q Consensus       257 ~v~~A~~~l~~~~-~~gkvVv~~~  279 (280)
                      ++++|++.++++. ..+|+|+++.
T Consensus       315 ~~~~a~~~~~~~~~~~~kvvv~~~  338 (339)
T PRK10083        315 HVADAIELFEKDQRHCCKVLLTFA  338 (339)
T ss_pred             HHHHHHHHHhcCCCceEEEEEecC
Confidence            9999999998654 4599999764

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=99.76  E-value=4e-17  Score=150.22  Aligned_cols=126  Identities=16%  Similarity=0.199  Sum_probs=92.1

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCC--cccc-----CCCccEEEeCCC---CHHHHHhccccC-CEEEEEcCCCC-CC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDN--FEDL-----PEKFDVVYDAIG---QCDRAVKAIKEG-GTVVALTGAVT-PP  218 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~--~~~~-----~~g~DvV~d~~g---~~~~~l~~l~~g-G~vV~~g~~~~-~~  218 (280)
                      +++.+++++++++++|+++++++.+.+  +.+.     .+++|+||||+|   .+..++++++++ |+++.+|.... ..
T Consensus       214 ~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~  293 (365)
T cd08277         214 GVDINEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAEL  293 (365)
T ss_pred             EEeCCHHHHHHHHHcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcccc
Confidence            455678899999999999999887532  2221     257999999998   368999999885 99999987531 10


Q ss_pred             -----ce----EE--EEe---ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          219 -----GF----RF--VVT---SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       219 -----~~----~~--~~~---~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                           .+    .+  ...   .....++++++++++|.++.....+++|+|+|+++|++.+++++ ..|++|.
T Consensus       294 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i~  365 (365)
T cd08277         294 SIRPFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVIT  365 (365)
T ss_pred             ccCHhHHhhCCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEeeC
Confidence                 11    11  111   12457899999999998775444446899999999999999887 4688763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=99.76  E-value=3.2e-17  Score=153.25  Aligned_cols=95  Identities=17%  Similarity=0.214  Sum_probs=73.6

Q ss_pred             CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCC-C--CCceE----------E--EEeecHHHHHHHHHHHHCCCce
Q 023571          183 EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAV-T--PPGFR----------F--VVTSNGEVLKKLNPYLESGKVK  244 (280)
Q Consensus       183 ~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~-~--~~~~~----------~--~~~~~~~~l~~l~~ll~~G~l~  244 (280)
                      +++|++||++|   .+..++++++++|+++.+++.. .  ...++          +  .......+++++++++++|+++
T Consensus       256 ~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~  335 (410)
T cd08238         256 QGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLN  335 (410)
T ss_pred             CCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCc
Confidence            47999999987   5789999999999988775432 1  11111          1  1122457899999999999999


Q ss_pred             eecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          245 PIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       245 ~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      +....+++|+|+|+.+|++.+. ++..||+||.+
T Consensus       336 ~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~  368 (410)
T cd08238         336 PARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYT  368 (410)
T ss_pred             hhhcEEEEecHHHHHHHHHHhh-ccCCceEEEEC
Confidence            8655557999999999999999 77789999986

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=99.75  E-value=2.5e-17  Score=150.85  Aligned_cols=190  Identities=27%  Similarity=0.328  Sum_probs=143.7

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCc-ccCceE------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPT-VPGYDV------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~-i~G~e~------------  150 (280)
                      |+++++...++.  ..++ +.+.|.+++|||+|||.++|||++|+|.+.|..+.  ...|. ++|||+            
T Consensus         1 m~a~~~~~~~~~--~~~~-~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~--~~~~~~i~GHE~~G~V~evG~~~~   75 (350)
T COG1063           1 MKAAVVYVGGGD--VRLE-EPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPF--VPPGDIILGHEFVGEVVEVGVVRG   75 (350)
T ss_pred             CceeEEEecCCc--cccc-cCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCC--CCCCCcccCccceEEEEEeccccC
Confidence            567777665543  3355 67777789999999999999999999999997652  23344 899999            


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        76 ~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~epla~  155 (350)
T COG1063          76 FKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLAT  155 (350)
T ss_pred             CCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcChhhh
Confidence                                                                                            


Q ss_pred             ------------------------------------------EEecChhhHHHHHh-CCCCEEEeCCCCCcccc------
Q 023571          151 ------------------------------------------AATSSTRNLEFLKS-LGADLAIDYTKDNFEDL------  181 (280)
Q Consensus       151 ------------------------------------------~~~~s~~~~~~l~~-lga~~vid~~~~~~~~~------  181 (280)
                                                                +++.+++|++++++ .|++.+++...++....      
T Consensus       156 ~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~  235 (350)
T COG1063         156 AYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTG  235 (350)
T ss_pred             hhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhC
Confidence                                                      55688999999999 67776666554332221      


Q ss_pred             CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCC-ce----------EEEE--e-ecHHHHHHHHHHHHCCCce
Q 023571          182 PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP-GF----------RFVV--T-SNGEVLKKLNPYLESGKVK  244 (280)
Q Consensus       182 ~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~-~~----------~~~~--~-~~~~~l~~l~~ll~~G~l~  244 (280)
                      ..|+|++|||+|   .+..++++++++|+++.+|...... .+          .+..  . .....++.+++++++|+++
T Consensus       236 g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~  315 (350)
T COG1063         236 GRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKID  315 (350)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCC
Confidence            147999999999   4789999999999999999886442 11          1111  1 2346899999999999998


Q ss_pred             eecCCCcccchhhHHHHHHHHHhCCC-CeeEEEEe
Q 023571          245 PIIDPKGPFPFSQVVEAFSYIETNKA-TGKVVIHP  278 (280)
Q Consensus       245 ~~~~~~~~~~l~~v~~A~~~l~~~~~-~gkvVv~~  278 (280)
                      +....++.++++++.+|++.+.+.+. ..|+++.+
T Consensus       316 ~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         316 PEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             hhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            87555678999999999999998654 46888753

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=99.75  E-value=1e-16  Score=146.49  Aligned_cols=128  Identities=23%  Similarity=0.285  Sum_probs=95.6

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCC--c
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP--G  219 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~--~  219 (280)
                      ++..++++.++++++|+++++++++.++.+.      .+++|++|||+|   .+..++++|+++|+++.+|......  .
T Consensus       196 ~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  275 (351)
T cd08285         196 AVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLP  275 (351)
T ss_pred             EEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceee
Confidence            4446677888889999999999887665432      257999999998   4689999999999999998655221  1


Q ss_pred             e------------EEE--E-eecHHHHHHHHHHHHCCCceeec-CCCcccchhhHHHHHHHHHhCCC-CeeEEEEe
Q 023571          220 F------------RFV--V-TSNGEVLKKLNPYLESGKVKPII-DPKGPFPFSQVVEAFSYIETNKA-TGKVVIHP  278 (280)
Q Consensus       220 ~------------~~~--~-~~~~~~l~~l~~ll~~G~l~~~~-~~~~~~~l~~v~~A~~~l~~~~~-~gkvVv~~  278 (280)
                      +            .+.  . ....++++++++++++|++++.. ..++.|+++++.+|++.+++++. ..|+||++
T Consensus       276 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         276 IPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             cChhhhhhhccccEEEEeecCCccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            1            011  1 11346889999999999998722 22236899999999999999874 68999864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=99.74  E-value=3.6e-16  Score=141.05  Aligned_cols=193  Identities=32%  Similarity=0.521  Sum_probs=147.6

Q ss_pred             ceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE------------
Q 023571           83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV------------  150 (280)
Q Consensus        83 ~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~------------  150 (280)
                      +|||+++...+....+.+. +.+.|.+.++||+|+|.++|+|+.|+....|.++. ....|.++|+|+            
T Consensus         1 ~m~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~   78 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIG-ESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP-PPGSSEILGLEVAGYVEDVGSDVK   78 (334)
T ss_pred             CcEEEEEEecCCCcceEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCcccceeeEEEEEEeCCCCC
Confidence            6999999988876678888 78888899999999999999999999998886642 223345566655            


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~  158 (334)
T PTZ00354         79 RFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAA  158 (334)
T ss_pred             CCCCCCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHH
Confidence                                                                                            


Q ss_pred             -----------EEecChhhHHHHHhCCCCEEEeCCCCC-cccc------CCCccEEEeCCC--CHHHHHhccccCCEEEE
Q 023571          151 -----------AATSSTRNLEFLKSLGADLAIDYTKDN-FEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVA  210 (280)
Q Consensus       151 -----------~~~~s~~~~~~l~~lga~~vid~~~~~-~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~  210 (280)
                                 +++.++++.++++++|+++++++...+ +...      .+++|++|||+|  .+..++++++++|++|.
T Consensus       159 ~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~  238 (334)
T PTZ00354        159 QLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIV  238 (334)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEE
Confidence                       566778889999999999999887654 3322      257999999988  57899999999999999


Q ss_pred             EcCCCCCC-c-e----------EEEE---e--e-------cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHH
Q 023571          211 LTGAVTPP-G-F----------RFVV---T--S-------NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIE  266 (280)
Q Consensus       211 ~g~~~~~~-~-~----------~~~~---~--~-------~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~  266 (280)
                      ++...... . +          .+..   .  .       ..+.++++++++++|.+++...  +.++++++.++++.+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~  316 (334)
T PTZ00354        239 YGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVD--RTYPLEEVAEAHTFLE  316 (334)
T ss_pred             EecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccc--cEEcHHHHHHHHHHHH
Confidence            97543111 0 1          0100   0  0       0134577889999999886544  4899999999999999


Q ss_pred             hCCCCeeEEEEeC
Q 023571          267 TNKATGKVVIHPI  279 (280)
Q Consensus       267 ~~~~~gkvVv~~~  279 (280)
                      .++..+|+|+.+.
T Consensus       317 ~~~~~~kvvv~~~  329 (334)
T PTZ00354        317 QNKNIGKVVLTVN  329 (334)
T ss_pred             hCCCCceEEEecC
Confidence            8887899999764

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=99.74  E-value=4.5e-16  Score=139.95  Aligned_cols=192  Identities=28%  Similarity=0.403  Sum_probs=146.0

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCC-CCCCCCcccCceE------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA-TDSPLPTVPGYDV------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~-~~~~~P~i~G~e~------------  150 (280)
                      |||+++.+.+.+..+++. +.+.|.+.+++|+|+|.++|+|+.|++...|..+. .....|.++|+|+            
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~   79 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPE-DVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVD   79 (324)
T ss_pred             CeEEEEcCCCCccceEEe-ccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCC
Confidence            789999887777778888 78888889999999999999999999998875431 0122344444444            


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        80 ~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vlI~g~~~~~g~~~  159 (324)
T cd08244          80 PAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLL  159 (324)
T ss_pred             CCCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHH
Confidence                                                                                            


Q ss_pred             ------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEE
Q 023571          151 ------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVA  210 (280)
Q Consensus       151 ------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~  210 (280)
                                  +++.++++.++++++|++.++++++.++.+.      .+++|+++||+|  ....++++++++|+++.
T Consensus       160 ~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~  239 (324)
T cd08244         160 VQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLT  239 (324)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEE
Confidence                        5556778888888899999998887665332      157999999998  57899999999999999


Q ss_pred             EcCCCCCC-c----------eEEE---Ee-----ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCC
Q 023571          211 LTGAVTPP-G----------FRFV---VT-----SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKAT  271 (280)
Q Consensus       211 ~g~~~~~~-~----------~~~~---~~-----~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~  271 (280)
                      +|...... .          ..+.   ..     ...+.+++++++++++.+++.+.  ..|+++++.+|++.+.+++..
T Consensus       240 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~--~~~~~~~~~~a~~~~~~~~~~  317 (324)
T cd08244         240 YGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVG--QTFPLERAAEAHAALEARSTV  317 (324)
T ss_pred             EecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccc--eEEeHHHHHHHHHHHHcCCCC
Confidence            98653211 1          1111   00     12467888999999999976543  489999999999999999988


Q ss_pred             eeEEEEe
Q 023571          272 GKVVIHP  278 (280)
Q Consensus       272 gkvVv~~  278 (280)
                      ||+|+++
T Consensus       318 ~kvv~~~  324 (324)
T cd08244         318 GKVLLLP  324 (324)
T ss_pred             ceEEEeC
Confidence            9999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=99.74  E-value=8.1e-17  Score=138.85  Aligned_cols=196  Identities=27%  Similarity=0.411  Sum_probs=150.4

Q ss_pred             CcccceeEEEEcccCCC-ccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------
Q 023571           79 TVPSEMKAWLYGEYGGV-DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------  150 (280)
Q Consensus        79 ~~p~~mka~~~~~~g~~-~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------  150 (280)
                      .+|...|+++|.++|+| +++++. +.++|+...++|+||+.|+.|||.|+..++|.|| ..+++|.+-|+|+       
T Consensus        15 q~~~~~kalvY~~hgdP~kVlql~-~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYp-vrP~~PAVgGnEGv~eVv~v   92 (354)
T KOG0025|consen   15 QMPARSKALVYSEHGDPAKVLQLK-NLELPAVPGSDVLVKMLAAPINPSDINQIQGVYP-VRPELPAVGGNEGVGEVVAV   92 (354)
T ss_pred             ccccccceeeecccCCchhhheee-cccCCCCCCCceeeeeeecCCChHHhhhhccccC-CCCCCCcccCCcceEEEEEe
Confidence            35666799999999998 789999 9999998888899999999999999999999998 5788999999999       


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        93 Gs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~  172 (354)
T KOG0025|consen   93 GSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSG  172 (354)
T ss_pred             cCCcCccCCCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccH
Confidence                                                                                            


Q ss_pred             -----------------EEecChhhHH----HHHhCCCCEEEeCCC---CCcc---ccCCCccEEEeCCC--CHHHHHhc
Q 023571          151 -----------------AATSSTRNLE----FLKSLGADLAIDYTK---DNFE---DLPEKFDVVYDAIG--QCDRAVKA  201 (280)
Q Consensus       151 -----------------~~~~s~~~~~----~l~~lga~~vid~~~---~~~~---~~~~g~DvV~d~~g--~~~~~l~~  201 (280)
                                       -++++..+.+    .|+.+||++||.-..   ....   .....+.+.|||+|  ......+.
T Consensus       173 VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~iar~  252 (354)
T KOG0025|consen  173 VGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIARY  252 (354)
T ss_pred             HHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHHHH
Confidence                             3455544444    455699999985322   1111   12467899999998  57788999


Q ss_pred             cccCCEEEEEcCCCC-CCceE-------------EEEee----------cHHHHHHHHHHHHCCCceeecCCCcccchhh
Q 023571          202 IKEGGTVVALTGAVT-PPGFR-------------FVVTS----------NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQ  257 (280)
Q Consensus       202 l~~gG~vV~~g~~~~-~~~~~-------------~~~~~----------~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~  257 (280)
                      |..||.++.+|+-.. |..+.             |++..          ..+.+.++.+|++.|+|+....+  ..+|++
T Consensus       253 L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e--~v~L~~  330 (354)
T KOG0025|consen  253 LERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCE--KVPLAD  330 (354)
T ss_pred             HhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccce--eeechh
Confidence            999999999998772 21111             11111          12667899999999999988775  789999


Q ss_pred             HHHHHHHHHhCCCC-eeEEEEe
Q 023571          258 VVEAFSYIETNKAT-GKVVIHP  278 (280)
Q Consensus       258 v~~A~~~l~~~~~~-gkvVv~~  278 (280)
                      ...|++........ ||-++.+
T Consensus       331 ~~tald~~L~~~~~~~Kq~i~~  352 (354)
T KOG0025|consen  331 HKTALDAALSKFGKSGKQIIVL  352 (354)
T ss_pred             hhHHHHHHHHHhccCCceEEEe
Confidence            99999888766543 5655543

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=99.74  E-value=3.2e-16  Score=142.29  Aligned_cols=192  Identities=24%  Similarity=0.363  Sum_probs=143.6

Q ss_pred             eeEEEEcccCCC-ccEEEeeeccCCCCCC-CcEEEEEEEEecChHHHHHHcCCCCCCCC---CCCcccCceE--------
Q 023571           84 MKAWLYGEYGGV-DVLKFDEKVTVPQVKE-DQVLIKVVAAALNPVDGKRRQGKFKATDS---PLPTVPGYDV--------  150 (280)
Q Consensus        84 mka~~~~~~g~~-~~l~l~~~~~~p~~~~-~eVlVkV~aagl~~~D~~~~~g~~~~~~~---~~P~i~G~e~--------  150 (280)
                      |||+++...+.+ +.+.++ +.|.|.|.+ ++|+|+|.++|+|+.|++.+.|.++....   ..|.++|||+        
T Consensus         1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG   79 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLE-SYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVG   79 (341)
T ss_pred             CceEEEccCCCchhheEEe-ecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeC
Confidence            899999888765 468899 899999888 99999999999999999999887642111   1455677766        


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        80 ~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~v  159 (341)
T cd08290          80 SGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAV  159 (341)
T ss_pred             CCCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHH
Confidence                                                                                            


Q ss_pred             ----------------EEecCh----hhHHHHHhCCCCEEEeCCCC---CccccC-----CCccEEEeCCC--CHHHHHh
Q 023571          151 ----------------AATSST----RNLEFLKSLGADLAIDYTKD---NFEDLP-----EKFDVVYDAIG--QCDRAVK  200 (280)
Q Consensus       151 ----------------~~~~s~----~~~~~l~~lga~~vid~~~~---~~~~~~-----~g~DvV~d~~g--~~~~~l~  200 (280)
                                      +++.++    ++.++++++|++++++++..   ++...+     +++|++|||+|  .+..+++
T Consensus       160 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~  239 (341)
T cd08290         160 GQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKSATELAR  239 (341)
T ss_pred             HHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHhHHHHHH
Confidence                            333333    56888888999999988764   443221     27999999998  5778999


Q ss_pred             ccccCCEEEEEcCCCC-CC----------ceEEEEe--------e----cHHHHHHHHHHHHCCCceeecCCCccc---c
Q 023571          201 AIKEGGTVVALTGAVT-PP----------GFRFVVT--------S----NGEVLKKLNPYLESGKVKPIIDPKGPF---P  254 (280)
Q Consensus       201 ~l~~gG~vV~~g~~~~-~~----------~~~~~~~--------~----~~~~l~~l~~ll~~G~l~~~~~~~~~~---~  254 (280)
                      +++++|+++.+|.... +.          ...+...        .    ....++++++++++|.+++....  .+   +
T Consensus       240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~  317 (341)
T cd08290         240 LLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVE--KVTDDP  317 (341)
T ss_pred             HhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCccc--ccccCC
Confidence            9999999999985431 11          1111110        0    11357889999999999876443  56   9


Q ss_pred             hhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          255 FSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       255 l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      ++++.+|++.+.+++..||+|+++
T Consensus       318 ~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         318 LEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HHHHHHHHHHHhhcCCCCeEEEeC
Confidence            999999999999998889999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=99.73  E-value=3.3e-16  Score=145.78  Aligned_cols=127  Identities=24%  Similarity=0.369  Sum_probs=96.4

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCC----------------------ccc----c--CCCccEEEeCCC--CHHHHHh
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDN----------------------FED----L--PEKFDVVYDAIG--QCDRAVK  200 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~----------------------~~~----~--~~g~DvV~d~~g--~~~~~l~  200 (280)
                      +++.++++.++++++|++.++|+++.+                      +..    .  .+++|++|||+|  .+..+++
T Consensus       219 ~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~  298 (398)
T TIGR01751       219 AVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVF  298 (398)
T ss_pred             EEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHH
Confidence            456778889999999999999986532                      000    0  157999999998  5788999


Q ss_pred             ccccCCEEEEEcCCCCC-Cce------------EEEEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHh
Q 023571          201 AIKEGGTVVALTGAVTP-PGF------------RFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIET  267 (280)
Q Consensus       201 ~l~~gG~vV~~g~~~~~-~~~------------~~~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~  267 (280)
                      +++++|+++.+|..... ..+            ........+.++++++++++|.+.+.+.  ++++++++.++++.+..
T Consensus       299 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~--~~~~l~~~~~a~~~~~~  376 (398)
T TIGR01751       299 VCRRGGMVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRIDPTLS--KVYPLEEIGQAHQDVHR  376 (398)
T ss_pred             hhccCCEEEEEccccCCCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCccccee--eEEcHHHHHHHHHHHHc
Confidence            99999999999875421 111            0111112345788999999999986644  48999999999999999


Q ss_pred             CCCCeeEEEEeC
Q 023571          268 NKATGKVVIHPI  279 (280)
Q Consensus       268 ~~~~gkvVv~~~  279 (280)
                      ++..||+|++++
T Consensus       377 ~~~~gkvvv~~~  388 (398)
T TIGR01751       377 NHHQGNVAVLVL  388 (398)
T ss_pred             CCCCceEEEEeC
Confidence            999999999874

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=99.73  E-value=2.7e-16  Score=142.73  Aligned_cols=124  Identities=27%  Similarity=0.365  Sum_probs=95.0

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCccccC------CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCC-C---
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVT-P---  217 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~-~---  217 (280)
                      +++.++++.++++++|++++++++.. +.+.+      +++|+++||+|   .++.++++|+++|+++.+|.... .   
T Consensus       197 ~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~  275 (340)
T cd05284         197 AVDRSEEALKLAERLGADHVLNASDD-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHGRLPT  275 (340)
T ss_pred             EEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCCCccCH
Confidence            45567788888888999999988765 43321      47999999998   37899999999999999975542 1   


Q ss_pred             -----CceEEE--EeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          218 -----PGFRFV--VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       218 -----~~~~~~--~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                           ....+.  .....+.++.+++++++|.+++.+   +.|+++++++|++.+++++..||+|+.+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~---~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         276 SDLVPTEISVIGSLWGTRAELVEVVALAESGKVKVEI---TKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             HHhhhcceEEEEEecccHHHHHHHHHHHHhCCCCcce---EEEeHHHHHHHHHHHHcCCccceEEecC
Confidence                 111111  122467889999999999988633   3799999999999999998889999753

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=99.72  E-value=4.4e-16  Score=142.16  Aligned_cols=125  Identities=22%  Similarity=0.299  Sum_probs=95.4

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCce--
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF--  220 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~--  220 (280)
                      +++.++++.++++++|++.+++++...+.+.     .+++|++||++|   .+..++++|+++|++|.+|........  
T Consensus       205 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~  284 (350)
T cd08240         205 VVDIDEAKLEAAKAAGADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPL  284 (350)
T ss_pred             EEeCCHHHHHHHHHhCCcEEecCCCccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccH
Confidence            3556778888888899988888876554332     137999999997   478999999999999999765422111  


Q ss_pred             --------EE--EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          221 --------RF--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       221 --------~~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                              .+  ......+++.++++++++|.+++...  ..|+++++.+|++.+.+++..||+|++
T Consensus       285 ~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~~~i~~~~~--~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         285 PLLPLRALTIQGSYVGSLEELRELVALAKAGKLKPIPL--TERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             HHHhhcCcEEEEcccCCHHHHHHHHHHHHcCCCcccee--eEEcHHHHHHHHHHHHcCCccceEEec
Confidence                    11  11123478899999999999886544  489999999999999999888999875

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.72  E-value=7.5e-16  Score=140.27  Aligned_cols=122  Identities=27%  Similarity=0.444  Sum_probs=89.6

Q ss_pred             ChhhHHHHHhCCCCEEEeCCCCCccc----cCCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCCC-Cce-------
Q 023571          155 STRNLEFLKSLGADLAIDYTKDNFED----LPEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVTP-PGF-------  220 (280)
Q Consensus       155 s~~~~~~l~~lga~~vid~~~~~~~~----~~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~~-~~~-------  220 (280)
                      +.++++.++++|++.+++.....+.+    ..+++|++|||+|  .+..++++++++|+++.+|..... ..+       
T Consensus       210 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  289 (350)
T cd08274         210 GAAKEEAVRALGADTVILRDAPLLADAKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYL  289 (350)
T ss_pred             CchhhHHHHhcCCeEEEeCCCccHHHHHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhh
Confidence            33477788888887666554433321    1257999999998  578999999999999999854321 111       


Q ss_pred             ---E--EEEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          221 ---R--FVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       221 ---~--~~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                         .  .......+.++++++++++|.+++.+.  +.|+++++.+|++.+..++..+|+|+++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~--~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         290 KDLTLFGSTLGTREVFRRLVRYIEEGEIRPVVA--KTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             cceEEEEeecCCHHHHHHHHHHHHCCCcccccc--cccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence               1  111224678999999999999987544  5899999999999999888889999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.72  E-value=5.8e-16  Score=139.28  Aligned_cols=190  Identities=24%  Similarity=0.313  Sum_probs=138.5

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++..+++++.++++ +.|.|.++++||+|+|.++|+|++|++.+.|.++. ...+|.++|||+             
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~~~~~~~   78 (325)
T cd05280           1 FKALVVEEQDGGVSLFLR-TLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGV-TRNYPHTPGIDAAGTVVSSDDPRFR   78 (325)
T ss_pred             CceEEEcccCCCCcceEE-eCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCC-CCCCCCccCcccEEEEEEeCCCCCC
Confidence            799999988876679999 99999999999999999999999999998876531 111222222222             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~  158 (325)
T cd05280          79 EGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGG  158 (325)
T ss_pred             CCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccH
Confidence                                                                                            


Q ss_pred             -----------------EEecChhhHHHHHhCCCCEEEeCCCCC--cccc--CCCccEEEeCCC--CHHHHHhccccCCE
Q 023571          151 -----------------AATSSTRNLEFLKSLGADLAIDYTKDN--FEDL--PEKFDVVYDAIG--QCDRAVKAIKEGGT  207 (280)
Q Consensus       151 -----------------~~~~s~~~~~~l~~lga~~vid~~~~~--~~~~--~~g~DvV~d~~g--~~~~~l~~l~~gG~  207 (280)
                                       +++.++++.++++++|+++++++.+..  ....  .+++|+||||+|  .+..++++++++|+
T Consensus       159 vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~  238 (325)
T cd05280         159 VGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLANLLKQTKYGGV  238 (325)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHHHHHHHHhhcCCCE
Confidence                             566778888999889999988876431  1111  257999999998  68999999999999


Q ss_pred             EEEEcCCCCC---Cc---e-----EEE---Ee-----ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhC
Q 023571          208 VVALTGAVTP---PG---F-----RFV---VT-----SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETN  268 (280)
Q Consensus       208 vV~~g~~~~~---~~---~-----~~~---~~-----~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~  268 (280)
                      +|.+|.....   ..   +     .+.   ..     ...+.++.+.+++..+..+. +.  ..|+++++++|++.+.++
T Consensus       239 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~a~~~~~~~  315 (325)
T cd05280         239 VASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLLEI-VV--REISLEELPEAIDRLLAG  315 (325)
T ss_pred             EEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCccc-ee--eEecHHHHHHHHHHHhcC
Confidence            9999865311   00   0     000   00     11244566666677774443 33  489999999999999999


Q ss_pred             CCCeeEEEEe
Q 023571          269 KATGKVVIHP  278 (280)
Q Consensus       269 ~~~gkvVv~~  278 (280)
                      +..||+|+++
T Consensus       316 ~~~gk~vv~~  325 (325)
T cd05280         316 KHRGRTVVKI  325 (325)
T ss_pred             CcceEEEEeC
Confidence            9889999864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.72  E-value=6.8e-16  Score=140.25  Aligned_cols=125  Identities=26%  Similarity=0.343  Sum_probs=97.0

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCC-ce
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP-GF  220 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~-~~  220 (280)
                      +++.++++.++++++|++.++++++.++.+.      .+++|++|||.+   .+..++++++++|+++.+|...... .+
T Consensus       195 ~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~  274 (341)
T cd08297         195 AIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPL  274 (341)
T ss_pred             EEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCC
Confidence            5667788889998899999999887665432      257999999765   5789999999999999998654211 11


Q ss_pred             ----------EEEEe--ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          221 ----------RFVVT--SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       221 ----------~~~~~--~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                                .+...  ...+.++.+++++++|.+++.+   ..|+++++.+|++.+..++..||+|+++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         275 DPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVKPHI---QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             CHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCccee---EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence                      11111  1268899999999999997643   3799999999999999998889999874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.71  E-value=6.7e-16  Score=140.38  Aligned_cols=124  Identities=19%  Similarity=0.272  Sum_probs=95.3

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc-CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCce------
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF------  220 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~------  220 (280)
                      +++.++++.++++++|++.+++....++... .+++|++|||+|   .+..++++++++|+++.+|.......+      
T Consensus       198 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  277 (337)
T cd05283         198 AFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLI  277 (337)
T ss_pred             EEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHh
Confidence            4556667888888899988888776544332 368999999998   378999999999999999865422111      


Q ss_pred             ----EE--EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          221 ----RF--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       221 ----~~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                          .+  ......+.++.+++++++|++++.+   +.|+++++++|++.+++++..||+|++
T Consensus       278 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         278 FGRKSVAGSLIGGRKETQEMLDFAAEHGIKPWV---EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             cCceEEEEecccCHHHHHHHHHHHHhCCCccce---EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence                11  1122457899999999999998653   379999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=99.71  E-value=8.9e-16  Score=139.02  Aligned_cols=189  Identities=23%  Similarity=0.351  Sum_probs=139.7

Q ss_pred             eEEEEccc---CCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-----------
Q 023571           85 KAWLYGEY---GGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-----------  150 (280)
Q Consensus        85 ka~~~~~~---g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-----------  150 (280)
                      ||+++.++   ++++.+++. +.|.|.++++||+|||.++++|+.|++.+.|..+  ...+|.++|+|+           
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~--~~~~~~~~g~e~~G~V~~vG~~v   77 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDI-DLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP--EAGQPKILGWDAAGVVVAVGDEV   77 (336)
T ss_pred             CceeeccccCCCCcccceec-ccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC--CCCCCcccceeeEEEEEEeCCCC
Confidence            57888887   777889999 8999999999999999999999999998877653  123344555555           


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        78 ~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga  157 (336)
T TIGR02817        78 TLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGG  157 (336)
T ss_pred             CCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcC
Confidence                                                                                            


Q ss_pred             ---------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEEeCCC---CHHHHHhc
Q 023571          151 ---------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG---QCDRAVKA  201 (280)
Q Consensus       151 ---------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g---~~~~~l~~  201 (280)
                                           +++.++++.++++++|+++++++.. ++...     .+++|+|+||+|   .+..++++
T Consensus       158 ~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~  236 (336)
T TIGR02817       158 AGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVEL  236 (336)
T ss_pred             CcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHH
Confidence                                 4445677888888899999998654 33322     257999999974   57899999


Q ss_pred             cccCCEEEEEcCCCCC-------CceEEE---Ee--e---------cHHHHHHHHHHHHCCCceeecCCC-cccchhhHH
Q 023571          202 IKEGGTVVALTGAVTP-------PGFRFV---VT--S---------NGEVLKKLNPYLESGKVKPIIDPK-GPFPFSQVV  259 (280)
Q Consensus       202 l~~gG~vV~~g~~~~~-------~~~~~~---~~--~---------~~~~l~~l~~ll~~G~l~~~~~~~-~~~~l~~v~  259 (280)
                      ++++|+++.++.....       ....+.   +.  .         ....++++++++++|.+++.+..+ ..++++++.
T Consensus       237 l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~  316 (336)
T TIGR02817       237 LAPQGRFALIDDPAELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLK  316 (336)
T ss_pred             hccCCEEEEEcccccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHH
Confidence            9999999998643210       001111   11  0         015678899999999998754321 123579999


Q ss_pred             HHHHHHHhCCCCeeEEEE
Q 023571          260 EAFSYIETNKATGKVVIH  277 (280)
Q Consensus       260 ~A~~~l~~~~~~gkvVv~  277 (280)
                      +|++.+++++..||+|++
T Consensus       317 ~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       317 RAHALIESGKARGKIVLE  334 (336)
T ss_pred             HHHHHHHcCCccceEEEe
Confidence            999999999888998875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=99.71  E-value=4e-16  Score=141.95  Aligned_cols=126  Identities=23%  Similarity=0.392  Sum_probs=92.0

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCc--
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPG--  219 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~--  219 (280)
                      ++..++++.++++++|+++++++++.++.+.      .+++|+||||.|   .+..++++|+++|+++.+|.......  
T Consensus       193 ~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  272 (341)
T PRK05396        193 ITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAID  272 (341)
T ss_pred             EEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCccc
Confidence            3445677888888999999999887665432      257999999987   47899999999999999986542111  


Q ss_pred             --------eEEEE---eecHHHHHHHHHHHHCC-CceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          220 --------FRFVV---TSNGEVLKKLNPYLESG-KVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       220 --------~~~~~---~~~~~~l~~l~~ll~~G-~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                              ..+..   ....+.+..+.+++++| ++.+.+.  +.|+++++.+|++.+.+++ .||+|++++
T Consensus       273 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~a~~~~~~~~-~gk~vv~~~  341 (341)
T PRK05396        273 WNKVIFKGLTIKGIYGREMFETWYKMSALLQSGLDLSPIIT--HRFPIDDFQKGFEAMRSGQ-SGKVILDWD  341 (341)
T ss_pred             HHHHhhcceEEEEEEccCccchHHHHHHHHHcCCChhHheE--EEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence                    11111   11234566788899998 3444333  4889999999999999887 799999864

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=99.70  E-value=1e-15  Score=142.17  Aligned_cols=125  Identities=21%  Similarity=0.341  Sum_probs=94.1

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCC----------------------cccc------CC-CccEEEeCCC--CHHHHH
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDN----------------------FEDL------PE-KFDVVYDAIG--QCDRAV  199 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~----------------------~~~~------~~-g~DvV~d~~g--~~~~~l  199 (280)
                      +++.++++.++++++|++++++++..+                      +.+.      .+ ++|++|||+|  .+..++
T Consensus       223 ~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~  302 (393)
T cd08246         223 AVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSV  302 (393)
T ss_pred             EEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHH
Confidence            566788899999999999999975431                      1111      13 7999999998  578999


Q ss_pred             hccccCCEEEEEcCCCC-CCceEE------------EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHH
Q 023571          200 KAIKEGGTVVALTGAVT-PPGFRF------------VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIE  266 (280)
Q Consensus       200 ~~l~~gG~vV~~g~~~~-~~~~~~------------~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~  266 (280)
                      ++++++|++|.+|.... ...+..            ......+.+.++++++++|.+.+.+.  +.|+++++++|++.+.
T Consensus       303 ~~l~~~G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~l~~~~~a~~~~~  380 (393)
T cd08246         303 FVCDRGGMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRIDPCLS--KVFSLDETPDAHQLMH  380 (393)
T ss_pred             HHhccCCEEEEEcccCCCCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCceeeee--EEEeHHHHHHHHHHHH
Confidence            99999999999986432 111110            01112358889999999999986543  5899999999999999


Q ss_pred             hC-CCCeeEEEE
Q 023571          267 TN-KATGKVVIH  277 (280)
Q Consensus       267 ~~-~~~gkvVv~  277 (280)
                      ++ +..||+|+-
T Consensus       381 ~~~~~~gkvvv~  392 (393)
T cd08246         381 RNQHHVGNMAVL  392 (393)
T ss_pred             hCccccceEEEe
Confidence            98 788998874

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.70  E-value=2.5e-15  Score=135.48  Aligned_cols=191  Identities=31%  Similarity=0.467  Sum_probs=143.4

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++...+..+.+++. +.+.|.++++||+|++.++|+|+.|++...|.++. ....|.++|||+             
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~G~~~~~   78 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLV-EEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPP-PVKDPLIPLSDGAGEVVAVGEGVTR   78 (336)
T ss_pred             CeEEEEeccCCCcceEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCC-CCCCCcccccceeEEEEEeCCCCcC
Confidence            899999877666678888 88888899999999999999999999988776531 111111111111             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~  158 (336)
T cd08276          79 FKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPL  158 (336)
T ss_pred             CCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCC
Confidence                                                                                            


Q ss_pred             ------------------------------EEecChhhHHHHHhCCCCEEEeCCC-CCcccc------CCCccEEEeCCC
Q 023571          151 ------------------------------AATSSTRNLEFLKSLGADLAIDYTK-DNFEDL------PEKFDVVYDAIG  193 (280)
Q Consensus       151 ------------------------------~~~~s~~~~~~l~~lga~~vid~~~-~~~~~~------~~g~DvV~d~~g  193 (280)
                                                    +++.++++.++++++|++.++++.. .++.+.      .+++|+++||+|
T Consensus       159 ~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~  238 (336)
T cd08276         159 KPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGG  238 (336)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECCC
Confidence                                          5556677888888889999988776 444332      158999999988


Q ss_pred             --CHHHHHhccccCCEEEEEcCCCCCC-----------ceEEE--EeecHHHHHHHHHHHHCCCceeecCCCcccchhhH
Q 023571          194 --QCDRAVKAIKEGGTVVALTGAVTPP-----------GFRFV--VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQV  258 (280)
Q Consensus       194 --~~~~~l~~l~~gG~vV~~g~~~~~~-----------~~~~~--~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v  258 (280)
                        .+..++++++++|+++.+|......           .+.+.  .....+.++++.++++++.+.+...  ..|+++++
T Consensus       239 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~--~~~~~~~~  316 (336)
T cd08276         239 PGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPVID--RVFPFEEA  316 (336)
T ss_pred             hHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcccccC--cEEeHHHH
Confidence              5789999999999999998654211           11111  1123678899999999998876543  48999999


Q ss_pred             HHHHHHHHhCCCCeeEEEEe
Q 023571          259 VEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       259 ~~A~~~l~~~~~~gkvVv~~  278 (280)
                      .++++.+.+++..+|+|+++
T Consensus       317 ~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         317 KEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             HHHHHHHHhCCCCceEEEeC
Confidence            99999999988889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.70  E-value=3.6e-15  Score=133.04  Aligned_cols=182  Identities=26%  Similarity=0.334  Sum_probs=137.7

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      ||++++.+.+ +..+++. +.+.|.++++||+|+|.++|+|+.|++...+..      .|.++|+|+             
T Consensus         1 ~~~~~~~~~~-~~~~~~~-~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~~------~~~~~g~e~~G~v~~~G~~v~~   72 (305)
T cd08270           1 MRALVVDPDA-PLRLRLG-EVPDPQPAPHEALVRVAAISLNRGELKFAAERP------DGAVPGWDAAGVVERAAADGSG   72 (305)
T ss_pred             CeEEEEccCC-CceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHhhccCC------CCCcccceeEEEEEEeCCCCCC
Confidence            7899987755 6778999 899999999999999999999999998765221      123444444             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        73 ~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~  152 (305)
T cd08270          73 PAVGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGASGGVGRFAVQL  152 (305)
T ss_pred             CCCCCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHH
Confidence                                                                                            


Q ss_pred             ---------EEecChhhHHHHHhCCCCEEEeCCCCCccccCCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCCC-C
Q 023571          151 ---------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVTP-P  218 (280)
Q Consensus       151 ---------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~~-~  218 (280)
                               +++.++++.++++++|++.+++... ++..  +++|+++||+|  .+..++++++.+|++|.+|..... .
T Consensus       153 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~--~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  229 (305)
T cd08270         153 AALAGAHVVAVVGSPARAEGLRELGAAEVVVGGS-ELSG--APVDLVVDSVGGPQLARALELLAPGGTVVSVGSSSGEPA  229 (305)
T ss_pred             HHHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccc-cccC--CCceEEEECCCcHHHHHHHHHhcCCCEEEEEeccCCCcc
Confidence                     4556778888898899877664332 2211  57999999998  578999999999999999864311 0


Q ss_pred             ------------ceEE---EEe---ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          219 ------------GFRF---VVT---SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       219 ------------~~~~---~~~---~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                                  ...+   .+.   ...+.++.+++++++|++++.+.  +.++++++.+|++.+.+++..||+|+.+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         230 VFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPRIG--WRGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             cccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccceec--cEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence                        1111   111   12467889999999999987644  4899999999999999998889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=99.70  E-value=1.1e-15  Score=140.21  Aligned_cols=127  Identities=24%  Similarity=0.324  Sum_probs=91.8

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCccc-------c--CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCC-
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFED-------L--PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTP-  217 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~-------~--~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~-  217 (280)
                      +++.++++.++++++|++.+++++..++.+       .  .+++|++|||+|   .+..++++++++|+++.+|..... 
T Consensus       207 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~  286 (361)
T cd08231         207 VIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAG  286 (361)
T ss_pred             EEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCC
Confidence            455678888999999999999887654321       1  257999999997   378999999999999999865421 


Q ss_pred             -C----------ceEE--EEeecHHHHHHHHHHHHCC--CceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          218 -P----------GFRF--VVTSNGEVLKKLNPYLESG--KVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       218 -~----------~~~~--~~~~~~~~l~~l~~ll~~G--~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                       .          .+.+  ......+.++++++++.++  .++.....+++|+++++++|++.+++++. +|+||++
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  361 (361)
T cd08231         287 TVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP  361 (361)
T ss_pred             ccccCHHHHhhcccEEEEcccCCchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence             1          1111  1112356788899999887  44332222358999999999999988774 8999853

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.70  E-value=9.4e-16  Score=138.18  Aligned_cols=191  Identities=21%  Similarity=0.280  Sum_probs=133.2

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++...|+++.+.++ +.+.|.++++||+|++.++|+|+.|.+...+... ....+|.++|||+             
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~V~~~~~~~~~   78 (326)
T cd08289           1 FQALVVEKDEDDVSVSVK-NLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGK-IVKRYPFIPGIDLAGTVVESNDPRFK   78 (326)
T ss_pred             CeeEEEeccCCcceeEEE-EccCCCCCCCeEEEEEEEEecChHHhhhhcCCcc-ccCCCCcCcccceeEEEEEcCCCCCC
Confidence            899999988877778899 9999999999999999999999999876642110 0112234444444             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~  158 (326)
T cd08289          79 PGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGG  158 (326)
T ss_pred             CCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCch
Confidence                                                                                            


Q ss_pred             -----------------EEecChhhHHHHHhCCCCEEEeCCCCCcc---cc-CCCccEEEeCCC--CHHHHHhccccCCE
Q 023571          151 -----------------AATSSTRNLEFLKSLGADLAIDYTKDNFE---DL-PEKFDVVYDAIG--QCDRAVKAIKEGGT  207 (280)
Q Consensus       151 -----------------~~~~s~~~~~~l~~lga~~vid~~~~~~~---~~-~~g~DvV~d~~g--~~~~~l~~l~~gG~  207 (280)
                                       +++.++++.++++++|++.++++++....   .. .+++|+||||+|  .+..++++++++|+
T Consensus       159 vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~  238 (326)
T cd08289         159 VGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGS  238 (326)
T ss_pred             HHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHHHHHHHHHHhhcCCE
Confidence                             45677888999999999999887653211   11 257999999998  57899999999999


Q ss_pred             EEEEcCCCC-CCc----------eEEEE---ee-----cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhC
Q 023571          208 VVALTGAVT-PPG----------FRFVV---TS-----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETN  268 (280)
Q Consensus       208 vV~~g~~~~-~~~----------~~~~~---~~-----~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~  268 (280)
                      ++.+|.... ...          ..+..   ..     ..+.++.+.+.+..+.+...+  ++.|+++++.+|++.+.++
T Consensus       239 ~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~a~~~~~~~  316 (326)
T cd08289         239 VAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNEI--KQEITLDELPEALKQILQG  316 (326)
T ss_pred             EEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCcccccccc--ceEeeHHHHHHHHHHHhcC
Confidence            999986531 111          01100   00     122333343333322222223  3589999999999999999


Q ss_pred             CCCeeEEEEe
Q 023571          269 KATGKVVIHP  278 (280)
Q Consensus       269 ~~~gkvVv~~  278 (280)
                      +..||+|+++
T Consensus       317 ~~~gkvvv~~  326 (326)
T cd08289         317 RVTGRTVVKL  326 (326)
T ss_pred             cccceEEEeC
Confidence            9989999874

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.70  E-value=2.6e-15  Score=135.21  Aligned_cols=189  Identities=24%  Similarity=0.324  Sum_probs=138.8

Q ss_pred             eEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE--------------
Q 023571           85 KAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV--------------  150 (280)
Q Consensus        85 ka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~--------------  150 (280)
                      ||+++...+.++.++++ +.|.|.++++||+|+|.++++|+.|++...|.++. ....|.++|||+              
T Consensus         1 ~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~V~~~~~~~~~~   78 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVE-TLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGV-VRSYPMIPGIDAAGTVVSSEDPRFRE   78 (323)
T ss_pred             CeEEEccCCCCcceeEe-ecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCC-CCCCCccceeeeEEEEEecCCCCCCC
Confidence            67888888877789999 99999999999999999999999999988886521 111233333332              


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~v  158 (323)
T TIGR02823        79 GDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGV  158 (323)
T ss_pred             CCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHH
Confidence                                                                                            


Q ss_pred             ----------------EEecChhhHHHHHhCCCCEEEeCCCCCcc--cc-CCCccEEEeCCC--CHHHHHhccccCCEEE
Q 023571          151 ----------------AATSSTRNLEFLKSLGADLAIDYTKDNFE--DL-PEKFDVVYDAIG--QCDRAVKAIKEGGTVV  209 (280)
Q Consensus       151 ----------------~~~~s~~~~~~l~~lga~~vid~~~~~~~--~~-~~g~DvV~d~~g--~~~~~l~~l~~gG~vV  209 (280)
                                      +++.++++.++++++|++.+++..+.+..  .. .+++|+++||+|  .+..++++++++|++|
T Consensus       159 g~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v  238 (323)
T TIGR02823       159 GSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGHTLANVLAQLKYGGAVA  238 (323)
T ss_pred             HHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEECccHHHHHHHHHHhCCCCEEE
Confidence                            45567777788888888888877543321  11 136999999998  6889999999999999


Q ss_pred             EEcCCCC-CC----------ceEEEE---e-----ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCC
Q 023571          210 ALTGAVT-PP----------GFRFVV---T-----SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKA  270 (280)
Q Consensus       210 ~~g~~~~-~~----------~~~~~~---~-----~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~  270 (280)
                      .+|.... ..          ...+..   .     ...+.++.+.+++..|.++.. .  +.|+++++++|++.+.+++.
T Consensus       239 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~l~~~~~a~~~~~~~~~  315 (323)
T TIGR02823       239 ACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI-T--REITLEELPEALEQILAGQH  315 (323)
T ss_pred             EEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc-e--eeecHHHHHHHHHHHhCCCc
Confidence            9986431 11          111110   0     112456777778888887654 2  48999999999999999998


Q ss_pred             CeeEEEEe
Q 023571          271 TGKVVIHP  278 (280)
Q Consensus       271 ~gkvVv~~  278 (280)
                      .||+|+++
T Consensus       316 ~~k~vv~~  323 (323)
T TIGR02823       316 RGRTVVDV  323 (323)
T ss_pred             cceEEEeC
Confidence            89999864

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=99.69  E-value=8.3e-16  Score=139.20  Aligned_cols=185  Identities=23%  Similarity=0.395  Sum_probs=135.2

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++..++++  ++++ +.|.|.+.+|||+|++.++++|+.|++...|.++.  ..+|.++|+|+             
T Consensus         1 m~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~~g~~~~~   75 (334)
T PRK13771          1 MKAVILPGFKQG--YRIE-EVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR--MKYPVILGHEVVGTVEEVGENVKG   75 (334)
T ss_pred             CeeEEEcCCCCC--cEEE-eCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC--CCCCeeccccceEEEEEeCCCCcc
Confidence            789999887764  8888 89999999999999999999999999988775531  11122222222             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        76 ~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~  155 (334)
T PRK13771         76 FKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGL  155 (334)
T ss_pred             CCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHH
Confidence                                                                                            


Q ss_pred             ------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc---CCCccEEEeC
Q 023571          151 ------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL---PEKFDVVYDA  191 (280)
Q Consensus       151 ------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~---~~g~DvV~d~  191 (280)
                                                          +++.++++.++++++ ++++++++  ++.+.   .+++|++|||
T Consensus       156 ~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~v~~~~~~d~~ld~  232 (334)
T PRK13771        156 RRAGVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS--KFSEEVKKIGGADIVIET  232 (334)
T ss_pred             HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch--hHHHHHHhcCCCcEEEEc
Confidence                                                344555666666666 55555554  22111   1479999999


Q ss_pred             CC--CHHHHHhccccCCEEEEEcCCCCCCc------------eEE--EEeecHHHHHHHHHHHHCCCceeecCCCcccch
Q 023571          192 IG--QCDRAVKAIKEGGTVVALTGAVTPPG------------FRF--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPF  255 (280)
Q Consensus       192 ~g--~~~~~l~~l~~gG~vV~~g~~~~~~~------------~~~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l  255 (280)
                      +|  .+..++++|+++|+++.+|.......            ..+  .....++.++++++++++|.++..+.  +.|++
T Consensus       233 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~  310 (334)
T PRK13771        233 VGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPVIG--AEVSL  310 (334)
T ss_pred             CChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcceEe--eeEcH
Confidence            98  57899999999999999986532111            111  12234788999999999999986544  48999


Q ss_pred             hhHHHHHHHHHhCCCCeeEEEEe
Q 023571          256 SQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       256 ~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      +++.+|++.++.++..||+|+.+
T Consensus       311 ~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        311 SEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             HHHHHHHHHHHcCCCcceEEEec
Confidence            99999999999988889999864

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=99.69  E-value=3.8e-15  Score=134.70  Aligned_cols=190  Identities=27%  Similarity=0.360  Sum_probs=142.9

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCC-------------------C-----
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT-------------------D-----  139 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~-------------------~-----  139 (280)
                      ||++++..++++. +.+. +.+.|.+++++|+|+|.++++|+.|++...|.++..                   .     
T Consensus         1 ~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~   78 (338)
T cd08254           1 MKAWRFHKGSKGL-LVLE-EVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNF   78 (338)
T ss_pred             CeeEEEecCCCCc-eEEe-ccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccC
Confidence            7999998888765 7778 889999999999999999999999999987765300                   0     


Q ss_pred             -CCCCcc------cC-----------------------ceE---------------------------------------
Q 023571          140 -SPLPTV------PG-----------------------YDV---------------------------------------  150 (280)
Q Consensus       140 -~~~P~i------~G-----------------------~e~---------------------------------------  150 (280)
                       .....+      .|                       .+.                                       
T Consensus        79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~  158 (338)
T cd08254          79 KVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVV  158 (338)
T ss_pred             CCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence             000001      01                       011                                       


Q ss_pred             -----------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccc-----cCCCccEEEe
Q 023571          151 -----------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFED-----LPEKFDVVYD  190 (280)
Q Consensus       151 -----------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~-----~~~g~DvV~d  190 (280)
                                                         +++.++++.++++++|+++++++.+..+.+     ..+++|+++|
T Consensus       159 ~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~vid  238 (338)
T cd08254         159 RAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDVIFD  238 (338)
T ss_pred             hccCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCceEEEE
Confidence                                               555678888889889999988877655432     1257999999


Q ss_pred             CCC---CHHHHHhccccCCEEEEEcCCCCCCceE------------EEEeecHHHHHHHHHHHHCCCceeecCCCcccch
Q 023571          191 AIG---QCDRAVKAIKEGGTVVALTGAVTPPGFR------------FVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPF  255 (280)
Q Consensus       191 ~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~~------------~~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l  255 (280)
                      |+|   .+..++++|+++|+++.+|.......+.            .......+.++.+++++++|.+++. .  +.+++
T Consensus       239 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-~--~~~~~  315 (338)
T cd08254         239 FVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQ-V--ETRPL  315 (338)
T ss_pred             CCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCccc-c--eeEcH
Confidence            997   4789999999999999997644221111            1112236789999999999999875 2  48999


Q ss_pred             hhHHHHHHHHHhCCCCeeEEEEe
Q 023571          256 SQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       256 ~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      +++.++++.+.+++..||+|+++
T Consensus       316 ~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         316 DEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             HHHHHHHHHHHcCCccceEEEeC
Confidence            99999999999999899999864

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.69  E-value=2.3e-15  Score=134.67  Aligned_cols=187  Identities=30%  Similarity=0.442  Sum_probs=141.0

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      ||++.+...+....+++. +.+.|.+.++||+|+|+++++|+.|++...|.++  ....|.++|+|+             
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~~~~   77 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLR-EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP--SVKFPRVLGIEAVGEVEEAPGGTFT   77 (320)
T ss_pred             CeEEEEcCCCCccceEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCccccceeEEEEEEecCCCCC
Confidence            789999877766678888 8888889999999999999999999999887653  122344444444             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        78 ~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~  157 (320)
T cd08243          78 PGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGL  157 (320)
T ss_pred             CCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHH
Confidence                                                                                            


Q ss_pred             --------------EEecChhhHHHHHhCCCCEEEeCCCCCccc----cCCCccEEEeCCC--CHHHHHhccccCCEEEE
Q 023571          151 --------------AATSSTRNLEFLKSLGADLAIDYTKDNFED----LPEKFDVVYDAIG--QCDRAVKAIKEGGTVVA  210 (280)
Q Consensus       151 --------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~----~~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~  210 (280)
                                    +++.++++.++++++|++++++. ..++.+    ..+++|+++||+|  .+..++++++++|+++.
T Consensus       158 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~i~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~  236 (320)
T cd08243         158 AALKLAKALGATVTATTRSPERAALLKELGADEVVID-DGAIAEQLRAAPGGFDKVLELVGTATLKDSLRHLRPGGIVCM  236 (320)
T ss_pred             HHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-CccHHHHHHHhCCCceEEEECCChHHHHHHHHHhccCCEEEE
Confidence                          56677888999999999888754 333322    1368999999998  57899999999999999


Q ss_pred             EcCCCCC---------------CceEEEE----eecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCC
Q 023571          211 LTGAVTP---------------PGFRFVV----TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKAT  271 (280)
Q Consensus       211 ~g~~~~~---------------~~~~~~~----~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~  271 (280)
                      +|.....               ....+..    ......++++.+++++|.+++...  +.|+++++.+|++.+.+++..
T Consensus       237 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~a~~~~~~~~~~  314 (320)
T cd08243         237 TGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPS--KVFTFDEIVEAHAYMESNRAF  314 (320)
T ss_pred             EccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecccc--cEEcHHHHHHHHHHHHhCCCC
Confidence            9863211               0011110    012356888999999999987533  589999999999999998888


Q ss_pred             eeEEE
Q 023571          272 GKVVI  276 (280)
Q Consensus       272 gkvVv  276 (280)
                      +|+|+
T Consensus       315 ~kvvv  319 (320)
T cd08243         315 GKVVV  319 (320)
T ss_pred             CcEEe
Confidence            89886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=99.69  E-value=7e-16  Score=140.90  Aligned_cols=126  Identities=17%  Similarity=0.234  Sum_probs=93.6

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCceE
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGFR  221 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~~  221 (280)
                      +++.++++.+.++++|++.+++++..++.+.      .+++|++|||+|   .+..++++++++|+++.+|.......+.
T Consensus       204 ~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  283 (350)
T cd08256         204 VLDLKDERLALARKFGADVVLNPPEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVD  283 (350)
T ss_pred             EEcCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccC
Confidence            3445677788888899999988876555432      247999999988   3688999999999999998654322111


Q ss_pred             EEE------------eecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 023571          222 FVV------------TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI  276 (280)
Q Consensus       222 ~~~------------~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv  276 (280)
                      +..            ......++++++++++|.+++....++.|+++++.+|++.+++++..+|+|+
T Consensus       284 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         284 WSIIGDRKELDVLGSHLGPYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             hhHhhcccccEEEEeccCchhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            100            1123568899999999999874212358999999999999999988899875

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=99.69  E-value=2.2e-15  Score=136.97  Aligned_cols=127  Identities=19%  Similarity=0.269  Sum_probs=95.3

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCccc---------cCCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFED---------LPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP  218 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~---------~~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~  218 (280)
                      ++..++++.++++++|++++++++..+..+         ..+++|+++||+|   .+..++++++++|+++.+|......
T Consensus       191 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~  270 (341)
T cd08262         191 ASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESD  270 (341)
T ss_pred             EECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCC
Confidence            344567888888999999999987653211         1257999999987   3688999999999999998653111


Q ss_pred             ------------ceEEEEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          219 ------------GFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       219 ------------~~~~~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                                  .+.+......+.++++++++++|.+.+....++.|+++++++|++.+++++..||+|++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         271 NIEPALAIRKELTLQFSLGYTPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             ccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence                        11122233456889999999999998643223589999999999999999988999974

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.68  E-value=1.5e-15  Score=136.69  Aligned_cols=187  Identities=21%  Similarity=0.284  Sum_probs=132.5

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCC-C--CCC--------Cc--------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT-D--SPL--------PT--------  144 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~-~--~~~--------P~--------  144 (280)
                      |||+++.+++   .++++ +.+.|+++++||+|+|.++++|+.|+++..|.++.. .  ...        +.        
T Consensus         1 ~~a~~~~~~~---~~~~~-~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~~~~~~G~e~~G~Vv~~G~~~~~G~~V~   76 (319)
T cd08242           1 MKALVLDGGL---DLRVE-DLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYPFPGVPGHEFVGIVEEGPEAELVGKRVV   76 (319)
T ss_pred             CeeEEEeCCC---cEEEE-ECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCCCCCccCceEEEEEEEeCCCCCCCCeEE
Confidence            7899997643   48999 999999999999999999999999999988765310 0  000        00        


Q ss_pred             -------------------------ccC---ceE----------------------------------------------
Q 023571          145 -------------------------VPG---YDV----------------------------------------------  150 (280)
Q Consensus       145 -------------------------i~G---~e~----------------------------------------------  150 (280)
                                               +.|   +.+                                              
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~~~~~~~~~~~~~g  156 (319)
T cd08242          77 GEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQVPITPG  156 (319)
T ss_pred             ECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHHHHHHHHHhcCCCCC
Confidence                                     000   011                                              


Q ss_pred             ---------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccCCCccEEEeCCC---CHHHHHh
Q 023571          151 ---------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG---QCDRAVK  200 (280)
Q Consensus       151 ---------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~~g~DvV~d~~g---~~~~~l~  200 (280)
                                                 +++.++++.++++++|++.++++.+.   ...+++|++|||+|   .+..+++
T Consensus       157 ~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~d~vid~~g~~~~~~~~~~  233 (319)
T cd08242         157 DKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE---SEGGGFDVVVEATGSPSGLELALR  233 (319)
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc---ccCCCCCEEEECCCChHHHHHHHH
Confidence                                       45567788888888999888877543   12357999999997   3789999


Q ss_pred             ccccCCEEEEEcCCCCCCceEE--------EE-eecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCC
Q 023571          201 AIKEGGTVVALTGAVTPPGFRF--------VV-TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKAT  271 (280)
Q Consensus       201 ~l~~gG~vV~~g~~~~~~~~~~--------~~-~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~  271 (280)
                      +++++|+++..+.......+.+        .+ ......++++++++++|.++.....++.|+++++++|++.++++. .
T Consensus       234 ~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~  312 (319)
T cd08242         234 LVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGPFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-A  312 (319)
T ss_pred             HhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecccHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-c
Confidence            9999999998765432211110        00 111124888999999999953222335899999999999999765 5


Q ss_pred             eeEEEEe
Q 023571          272 GKVVIHP  278 (280)
Q Consensus       272 gkvVv~~  278 (280)
                      +|+||++
T Consensus       313 ~k~vi~~  319 (319)
T cd08242         313 LKVLLRP  319 (319)
T ss_pred             eEEEeCC
Confidence            8998863

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.68  E-value=1.6e-15  Score=138.08  Aligned_cols=188  Identities=31%  Similarity=0.423  Sum_probs=138.1

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCce--------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYD--------------  149 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e--------------  149 (280)
                      |||+++..+| +..++++ +.+.|.++++||+|+|.++|+|+.|++...+.++   ...|.++|+|              
T Consensus         1 m~a~~~~~~~-~~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~---~~~~~~~g~e~~G~v~~vG~~v~~   75 (339)
T cd08249           1 QKAAVLTGPG-GGLLVVV-DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFI---PSYPAILGCDFAGTVVEVGSGVTR   75 (339)
T ss_pred             CceEEeccCC-CCccccc-CCCCCCCCCCEEEEEEEEEEcCchheeeeecccc---cCCCceeeeeeeEEEEEeCCCcCc
Confidence            7899998887 6668999 9999999999999999999999999876633210   0000001110              


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          150 --------------------------------------------------------------------------------  149 (280)
Q Consensus       150 --------------------------------------------------------------------------------  149 (280)
                                                                                                      
T Consensus        76 ~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~  155 (339)
T cd08249          76 FKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKG  155 (339)
T ss_pred             CCCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCC
Confidence                                                                                            


Q ss_pred             --E------------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEEeCCC---CH
Q 023571          150 --V------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG---QC  195 (280)
Q Consensus       150 --~------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g---~~  195 (280)
                        +                        +.+.++++.++++++|+++++++.+.++.+.     .+++|+|||++|   .+
T Consensus       156 ~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~~  235 (339)
T cd08249         156 KPVLIWGGSSSVGTLAIQLAKLAGYKVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESA  235 (339)
T ss_pred             CEEEEEcChhHHHHHHHHHHHHcCCeEEEEECcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchHH
Confidence              1                        2223567888888899999999887665432     267999999987   47


Q ss_pred             HHHHhcccc--CCEEEEEcCCCCCC----ceEE------EE--------eecHHHHHHHHHHHHCCCceeecCCCcccc-
Q 023571          196 DRAVKAIKE--GGTVVALTGAVTPP----GFRF------VV--------TSNGEVLKKLNPYLESGKVKPIIDPKGPFP-  254 (280)
Q Consensus       196 ~~~l~~l~~--gG~vV~~g~~~~~~----~~~~------~~--------~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~-  254 (280)
                      ..+++++++  +|++|.+|......    ....      .+        ......++++.+++++|.+.+....  .++ 
T Consensus       236 ~~~~~~l~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~  313 (339)
T cd08249         236 QLCAEALGRSGGGKLVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVR--VVEG  313 (339)
T ss_pred             HHHHHHHhccCCCEEEEecCCCccccCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCce--ecCC
Confidence            899999999  99999998654211    1110      00        1123567889999999999876443  566 


Q ss_pred             -hhhHHHHHHHHHhCC-CCeeEEEEe
Q 023571          255 -FSQVVEAFSYIETNK-ATGKVVIHP  278 (280)
Q Consensus       255 -l~~v~~A~~~l~~~~-~~gkvVv~~  278 (280)
                       ++++.+|++.+.+++ ..+|+|+++
T Consensus       314 ~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         314 GLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             cHHHHHHHHHHHHCCCccceEEEEeC
Confidence             999999999999998 889999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.68  E-value=3.3e-15  Score=136.07  Aligned_cols=191  Identities=40%  Similarity=0.691  Sum_probs=136.5

Q ss_pred             eeEEEEcccCCC-ccEEEeeeccCCCC-CCCcEEEEEEEEecChHHHHHHcCCCCC-------------CCCCCCcccCc
Q 023571           84 MKAWLYGEYGGV-DVLKFDEKVTVPQV-KEDQVLIKVVAAALNPVDGKRRQGKFKA-------------TDSPLPTVPGY  148 (280)
Q Consensus        84 mka~~~~~~g~~-~~l~l~~~~~~p~~-~~~eVlVkV~aagl~~~D~~~~~g~~~~-------------~~~~~P~i~G~  148 (280)
                      |||+++.++|++ +.++++ +.+.|.| +++||+|+|.++++|+.|+++..|....             .....|.++||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~   79 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLE-NARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGR   79 (350)
T ss_pred             CceEEecccCCCcceeeec-ccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecc
Confidence            789998888875 347888 8999999 5999999999999999999988774210             01244666777


Q ss_pred             eE------------------------------------------------------------------------------
Q 023571          149 DV------------------------------------------------------------------------------  150 (280)
Q Consensus       149 e~------------------------------------------------------------------------------  150 (280)
                      |+                                                                              
T Consensus        80 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~  159 (350)
T cd08248          80 DCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPK  159 (350)
T ss_pred             eeEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCc
Confidence            66                                                                              


Q ss_pred             -------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc---CCCccEEEeCCC--C
Q 023571          151 -------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL---PEKFDVVYDAIG--Q  194 (280)
Q Consensus       151 -------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~---~~g~DvV~d~~g--~  194 (280)
                                                     +++.+.++.+.++++|++.+++..+.++.+.   .+++|++|||+|  .
T Consensus       160 ~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~~  239 (350)
T cd08248         160 NAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDTVGGDT  239 (350)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCcchHHHHHHhCCceEEECCChhHHHHHHhcCCCCEEEECCChHH
Confidence                                           1112223444555566666666554433322   257999999998  5


Q ss_pred             HHHHHhccccCCEEEEEcCCCCCC----ce---------EE-----------------EEeecHHHHHHHHHHHHCCCce
Q 023571          195 CDRAVKAIKEGGTVVALTGAVTPP----GF---------RF-----------------VVTSNGEVLKKLNPYLESGKVK  244 (280)
Q Consensus       195 ~~~~l~~l~~gG~vV~~g~~~~~~----~~---------~~-----------------~~~~~~~~l~~l~~ll~~G~l~  244 (280)
                      +..++++++++|++|.+|......    .+         .+                 ......+.++++++++++|.+.
T Consensus       240 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  319 (350)
T cd08248         240 EKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIK  319 (350)
T ss_pred             HHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEe
Confidence            789999999999999997542100    00         00                 0122457789999999999987


Q ss_pred             eecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          245 PIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       245 ~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                      +...  +.|+++++.+|++.+.+++..+|++++
T Consensus       320 ~~~~--~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         320 PVID--KVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             cccc--eeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            6543  589999999999999998888888863

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=99.67  E-value=3.4e-15  Score=135.77  Aligned_cols=124  Identities=24%  Similarity=0.398  Sum_probs=90.9

Q ss_pred             cChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCC------
Q 023571          154 SSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP------  218 (280)
Q Consensus       154 ~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~------  218 (280)
                      .++++.++++++|++.+++++..++.+.      .+++|++|||+|   .+..++++|+++|+++.+|......      
T Consensus       200 ~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~  279 (347)
T cd05278         200 SNPERLDLAKEAGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLG  279 (347)
T ss_pred             CCHHHHHHHHHhCCcEEEcCCcchHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccc
Confidence            4556667777788888888877655432      157999999987   3689999999999999997543211      


Q ss_pred             -----ceEEE--EeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCC-CeeEEEE
Q 023571          219 -----GFRFV--VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKA-TGKVVIH  277 (280)
Q Consensus       219 -----~~~~~--~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~-~gkvVv~  277 (280)
                           ...+.  .....+.++++++++++|.+++....+..|+++++.+|++.+..++. .+|+|++
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         280 EWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             hhhhceeEEEeeccCchhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence                 11111  11225789999999999999864212247899999999999998887 6899876

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=99.67  E-value=3e-15  Score=136.28  Aligned_cols=125  Identities=21%  Similarity=0.279  Sum_probs=90.0

Q ss_pred             cChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCce----
Q 023571          154 SSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF----  220 (280)
Q Consensus       154 ~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~----  220 (280)
                      .++++.++++++|++.++++...++...      .+++|++|||+|   .++.++++|+++|++|.+|.......+    
T Consensus       199 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~  278 (345)
T cd08286         199 LDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEK  278 (345)
T ss_pred             CCHHHHHHHHHhCCCceeccccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHH
Confidence            4566777778889888898876654332      157999999987   467888999999999999864422111    


Q ss_pred             ------EEEEee-cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCC--CCeeEEEEe
Q 023571          221 ------RFVVTS-NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK--ATGKVVIHP  278 (280)
Q Consensus       221 ------~~~~~~-~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~--~~gkvVv~~  278 (280)
                            .+.... ..+.++++.+++++|.+++....+++|+++++++|++.+....  ...|+||++
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         279 LWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             HhhcCcEEEeecCchhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence                  111111 2367888999999999876432235899999999999998764  346898864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=99.67  E-value=4.5e-15  Score=133.74  Aligned_cols=123  Identities=27%  Similarity=0.482  Sum_probs=91.4

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc---CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCCCC-------
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL---PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVTPP-------  218 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~---~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~~~-------  218 (280)
                      +++.++++.+.++++|.+.+++..+  +.+.   ..++|++|||+|  .+..++++++++|++|.++......       
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~  269 (332)
T cd08259         192 AVTRSPEKLKILKELGADYVIDGSK--FSEDVKKLGGADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGL  269 (332)
T ss_pred             EEeCCHHHHHHHHHcCCcEEEecHH--HHHHHHhccCCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHH
Confidence            3455667777777788777776654  3221   247999999998  5788999999999999997653110       


Q ss_pred             ----ce--EEEEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          219 ----GF--RFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       219 ----~~--~~~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                          ..  ........+.++++.+++++|.+++.+.  +.|+++++.+|++.+.+++..||+|++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         270 LILKEIRIIGSISATKADVEEALKLVKEGKIKPVID--RVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HHhCCcEEEEecCCCHHHHHHHHHHHHcCCCcccee--EEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence                11  1112235678999999999999986644  489999999999999999888998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.67  E-value=5.7e-15  Score=132.68  Aligned_cols=184  Identities=25%  Similarity=0.418  Sum_probs=138.7

Q ss_pred             cccCCCc--cEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-----------------
Q 023571           90 GEYGGVD--VLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-----------------  150 (280)
Q Consensus        90 ~~~g~~~--~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-----------------  150 (280)
                      ..++.+.  .+++. +.+.|.+++++|+|+|.++++|+.|+.++.|.++. ....|.++|+|+                 
T Consensus         4 ~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~v~~~~~G   81 (323)
T cd05282           4 TQFGEPLPLVLELV-SLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS-RPPLPAVPGNEGVGVVVEVGSGVSGLLVG   81 (323)
T ss_pred             CcCCCCccceEEeE-eCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC-CCCCCCcCCcceEEEEEEeCCCCCCCCCC
Confidence            3344443  68888 88899999999999999999999999988776542 223445555555                 


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        82 d~V~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~  161 (323)
T cd05282          82 QRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKL  161 (323)
T ss_pred             CEEEEeCCCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHH
Confidence                                                                                            


Q ss_pred             ------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCC
Q 023571          151 ------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVT  216 (280)
Q Consensus       151 ------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~  216 (280)
                            +++.++++.++++++|++.++++++.++...      .+++|++|||+|  .+..++++++++|+++.+|....
T Consensus       162 ~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~  241 (323)
T cd05282         162 LGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSG  241 (323)
T ss_pred             CCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCC
Confidence                  5667788899999999999999876554332      257999999998  56788999999999999975432


Q ss_pred             C-----------CceEEEE---e---------ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCee
Q 023571          217 P-----------PGFRFVV---T---------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGK  273 (280)
Q Consensus       217 ~-----------~~~~~~~---~---------~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gk  273 (280)
                      .           ....+..   .         ..++.++++++++++|.+.+...  +.|+++++.+|++.+..++..||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~--~~~~~~~~~~a~~~~~~~~~~~k  319 (323)
T cd05282         242 EPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVG--AKFPLEDFEEAVAAAEQPGRGGK  319 (323)
T ss_pred             CCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCcc--ceecHHHHHHHHHHHhcCCCCce
Confidence            1           1111111   0         11256888999999999986543  58999999999999999888899


Q ss_pred             EEEE
Q 023571          274 VVIH  277 (280)
Q Consensus       274 vVv~  277 (280)
                      +|++
T Consensus       320 vv~~  323 (323)
T cd05282         320 VLLT  323 (323)
T ss_pred             EeeC
Confidence            8874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.67  E-value=1.1e-14  Score=130.35  Aligned_cols=190  Identities=36%  Similarity=0.622  Sum_probs=139.3

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++...+.++.+.+. +.+.|.+.+++|+|+|.++++|+.|++...|.+. .....|.++|+|+             
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~v~~~G~~~~~   78 (326)
T cd08272           1 MKALVLESFGGPEVFELR-EVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA-ARPPLPAILGCDVAGVVEAVGEGVTR   78 (326)
T ss_pred             CeEEEEccCCCchheEEe-ecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC-CCCCCCcccccceeEEEEEeCCCCCC
Confidence            799999988877778888 8888889999999999999999999998877543 1112233333333             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g  158 (326)
T cd08272          79 FRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVG  158 (326)
T ss_pred             CCCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHH
Confidence                                                                                            


Q ss_pred             ---------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCE
Q 023571          151 ---------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGT  207 (280)
Q Consensus       151 ---------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~  207 (280)
                                     +++.+ ++.++++++|.+.+++.... +.+.      .+++|+++||.|  .+..++++++++|+
T Consensus       159 ~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~  236 (326)
T cd08272         159 HVAVQLAKAAGARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGR  236 (326)
T ss_pred             HHHHHHHHHcCCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhccCCE
Confidence                           33344 67777777888888877654 4332      247999999988  57789999999999


Q ss_pred             EEEEcCCCC---------CCceEEEE-e----------ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHh
Q 023571          208 VVALTGAVT---------PPGFRFVV-T----------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIET  267 (280)
Q Consensus       208 vV~~g~~~~---------~~~~~~~~-~----------~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~  267 (280)
                      +|.++....         ...+.... .          ...+.+.+++++++++.+++.+.. +.|+++++.++++.+.+
T Consensus       237 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~~~~~  315 (326)
T cd08272         237 VVSILGGATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDP-RTFPLEEAAAAHARLES  315 (326)
T ss_pred             EEEEecCCccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccccccc-ceecHHHHHHHHHHHHc
Confidence            999875420         00111111 0          024678889999999998865432 48999999999999998


Q ss_pred             CCCCeeEEEEe
Q 023571          268 NKATGKVVIHP  278 (280)
Q Consensus       268 ~~~~gkvVv~~  278 (280)
                      ++..+|+|+++
T Consensus       316 ~~~~~~vv~~~  326 (326)
T cd08272         316 GSARGKIVIDV  326 (326)
T ss_pred             CCcccEEEEEC
Confidence            88889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=99.67  E-value=4.4e-15  Score=135.23  Aligned_cols=127  Identities=18%  Similarity=0.288  Sum_probs=96.2

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCC-CCccccC-----CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCC---
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTK-DNFEDLP-----EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP---  218 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~-~~~~~~~-----~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~---  218 (280)
                      +++.++++.++++++|++.+++++. .++...+     +++|++|||+|   .+..++++++++|+++.+|......   
T Consensus       194 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~  273 (345)
T cd08260         194 AVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGV  273 (345)
T ss_pred             EEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCcc
Confidence            5667888899999999999999887 4543321     37999999987   4678999999999999998643211   


Q ss_pred             ce----------EEE--EeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          219 GF----------RFV--VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       219 ~~----------~~~--~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                      .+          .+.  .....+.++++++++++|.+.+....+..++++++++|++.++.++..||+|++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         274 ALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             ccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            01          111  112357899999999999987643223489999999999999999888998864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.67  E-value=7e-15  Score=131.28  Aligned_cols=191  Identities=28%  Similarity=0.510  Sum_probs=142.6

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      ||++++...+.++.+.+. +.+.|.+.+++|+|++.++++|+.|++...|.++. ....|.++|||+             
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~~   78 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLG-DLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG-LPPLPYVPGSDGAGVVEAVGEGVDG   78 (325)
T ss_pred             CceEEEcccCCcccceee-ecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC-CCCCCeecccceEEEEEeeCCCCCC
Confidence            788998877666668888 89999999999999999999999999988776531 123344444444             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g  158 (325)
T cd08253          79 LKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVG  158 (325)
T ss_pred             CCCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHH
Confidence                                                                                            


Q ss_pred             ---------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCE
Q 023571          151 ---------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGT  207 (280)
Q Consensus       151 ---------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~  207 (280)
                                     +++.++++.++++++|++.++++...++.+.      .+++|+++||+|  .+...+++++.+|+
T Consensus       159 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~  238 (325)
T cd08253         159 HAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGR  238 (325)
T ss_pred             HHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhCCCCE
Confidence                           4555677788888889998888877654332      258999999998  57788999999999


Q ss_pred             EEEEcCCCCC----------CceEEEE---e-----ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCC
Q 023571          208 VVALTGAVTP----------PGFRFVV---T-----SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK  269 (280)
Q Consensus       208 vV~~g~~~~~----------~~~~~~~---~-----~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~  269 (280)
                      ++.++.....          ....+..   .     ...+.++.+.+++++|.+++...  +.|+++++.++++.+..++
T Consensus       239 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~  316 (325)
T cd08253         239 IVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIA--REYPLEEAAAAHEAVESGG  316 (325)
T ss_pred             EEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccc--cEEcHHHHHHHHHHHHcCC
Confidence            9999863210          0111111   0     12345677788888998876543  4899999999999999988


Q ss_pred             CCeeEEEEe
Q 023571          270 ATGKVVIHP  278 (280)
Q Consensus       270 ~~gkvVv~~  278 (280)
                      ..||+++++
T Consensus       317 ~~~kvv~~~  325 (325)
T cd08253         317 AIGKVVLDP  325 (325)
T ss_pred             CcceEEEeC
Confidence            889999864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=99.67  E-value=7.1e-15  Score=133.33  Aligned_cols=125  Identities=23%  Similarity=0.363  Sum_probs=93.0

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCC-CCccc----cCCCccEEEeC-CC--CHHHHHhccccCCEEEEEcCCCCCCc---
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTK-DNFED----LPEKFDVVYDA-IG--QCDRAVKAIKEGGTVVALTGAVTPPG---  219 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~-~~~~~----~~~g~DvV~d~-~g--~~~~~l~~l~~gG~vV~~g~~~~~~~---  219 (280)
                      +++.+++++++++++|++.+++++. .++.+    ..+++|+++++ .+  .+..++++++.+|+++.+|.......   
T Consensus       192 ~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  271 (338)
T PRK09422        192 AVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSI  271 (338)
T ss_pred             EEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcCCCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecH
Confidence            5567888999999999999999864 33322    22478855544 44  58999999999999999986532111   


Q ss_pred             -------eEEE--EeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          220 -------FRFV--VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       220 -------~~~~--~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                             ..+.  ....++.++++++++++|.+.+.+.   .++++++.+|++.+.+++..||+|+.+
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~v~---~~~~~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        272 PRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPKVQ---LRPLEDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             HHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCccEE---EEcHHHHHHHHHHHHcCCccceEEEec
Confidence                   1111  1114678999999999999876533   689999999999999999889999875

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=99.66  E-value=1.1e-14  Score=131.23  Aligned_cols=191  Identities=33%  Similarity=0.508  Sum_probs=138.0

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++...+.+..+++. +.+.|.+.+++|+|++.++|+|+.|++.+.|.++. ...+|.++|||+             
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~G~~~~~   78 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYG-DLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI-KLPLPHILGSDGAGVVEAVGPGVTN   78 (342)
T ss_pred             CeEEEEecCCCccceeEe-ecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCC-CCCCCeecccceEEEEEEeCCCCCC
Confidence            789998866666678888 88888899999999999999999999988775431 111222222222             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l  158 (342)
T cd08266          79 VKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHML  158 (342)
T ss_pred             CCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHH
Confidence                                                                                            


Q ss_pred             -------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccE
Q 023571          151 -------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDV  187 (280)
Q Consensus       151 -------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~Dv  187 (280)
                                                           +++.++++.+.++.+|.+.+++..+.++.+.      .+++|+
T Consensus       159 ~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  238 (342)
T cd08266         159 VTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDV  238 (342)
T ss_pred             HHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCcE
Confidence                                                 3445556666666667666676655443221      147999


Q ss_pred             EEeCCC--CHHHHHhccccCCEEEEEcCCCCCC-----------ceEE--EEeecHHHHHHHHHHHHCCCceeecCCCcc
Q 023571          188 VYDAIG--QCDRAVKAIKEGGTVVALTGAVTPP-----------GFRF--VVTSNGEVLKKLNPYLESGKVKPIIDPKGP  252 (280)
Q Consensus       188 V~d~~g--~~~~~l~~l~~gG~vV~~g~~~~~~-----------~~~~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~  252 (280)
                      ++|+.|  .+..++++++++|+++.++......           ...+  ........+.++++++++|.+++...  +.
T Consensus       239 ~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~--~~  316 (342)
T cd08266         239 VVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLKPVID--SV  316 (342)
T ss_pred             EEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCccccee--ee
Confidence            999998  5789999999999999997654210           0111  11123467889999999999887543  58


Q ss_pred             cchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          253 FPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       253 ~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      |+++++.+|++.+..++..+|+|+++
T Consensus       317 ~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         317 FPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             EcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            99999999999999888889999863

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.65  E-value=7.4e-15  Score=130.87  Aligned_cols=189  Identities=31%  Similarity=0.518  Sum_probs=141.6

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++.+.+.++.+++. +.+.|.+.+|+|+|+|.++|+|+.|++...|.++ ....+|.++|+|+             
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~v~~vg~~~~~   78 (323)
T cd05276           1 MKAIVIKEPGGPEVLELG-EVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYP-PPPGASDILGLEVAGVVVAVGPGVTG   78 (323)
T ss_pred             CeEEEEecCCCcccceEE-ecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCC-CCCCCCCcccceeEEEEEeeCCCCCC
Confidence            799999887777778888 8888888999999999999999999999887664 2234566677766             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~  158 (323)
T cd05276          79 WKVGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQ  158 (323)
T ss_pred             CCCCCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHH
Confidence                                                                                            


Q ss_pred             ----------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEEc
Q 023571          151 ----------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALT  212 (280)
Q Consensus       151 ----------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g  212 (280)
                                +++.++++.+.++++|++.++++...++.+.      .+++|++||++|  .+..++++++++|+++.+|
T Consensus       159 ~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~  238 (323)
T cd05276         159 LAKALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIG  238 (323)
T ss_pred             HHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEe
Confidence                      4445567777787788888888776544332      257999999998  5788999999999999997


Q ss_pred             CCCCC---C--------ceEEE---Eee---------cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCC
Q 023571          213 GAVTP---P--------GFRFV---VTS---------NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK  269 (280)
Q Consensus       213 ~~~~~---~--------~~~~~---~~~---------~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~  269 (280)
                      .....   .        ...+.   ...         ....+.++++++++|.+++...  +.|+++++++|++.+.+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~  316 (323)
T cd05276         239 LLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVID--KVFPLEEAAEAHRRMESNE  316 (323)
T ss_pred             cCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcc--eEEcHHHHHHHHHHHHhCC
Confidence            64311   0        11110   000         1244677888999999876543  5899999999999999988


Q ss_pred             CCeeEEE
Q 023571          270 ATGKVVI  276 (280)
Q Consensus       270 ~~gkvVv  276 (280)
                      ..||+|+
T Consensus       317 ~~~kvv~  323 (323)
T cd05276         317 HIGKIVL  323 (323)
T ss_pred             CcceEeC
Confidence            8888874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.65  E-value=2.2e-14  Score=129.08  Aligned_cols=190  Identities=24%  Similarity=0.344  Sum_probs=139.5

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++.++|+++.++++ +.|.|.++++||+|+|.++++|+.|+++..|.++. ...+|.++|||+             
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~V~~~~~~~~~   78 (324)
T cd08288           1 FKALVLEKDDGGTSAELR-ELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGI-VRTFPLVPGIDLAGTVVESSSPRFK   78 (324)
T ss_pred             CeeEEEeccCCCcceEEE-ECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccc-cCCCCCccccceEEEEEeCCCCCCC
Confidence            899999988877679999 99999999999999999999999999988765410 000111111111             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~  158 (324)
T cd08288          79 PGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGG  158 (324)
T ss_pred             CCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcH
Confidence                                                                                            


Q ss_pred             -----------------EEecChhhHHHHHhCCCCEEEeCCCCCcc--cc-CCCccEEEeCCC--CHHHHHhccccCCEE
Q 023571          151 -----------------AATSSTRNLEFLKSLGADLAIDYTKDNFE--DL-PEKFDVVYDAIG--QCDRAVKAIKEGGTV  208 (280)
Q Consensus       151 -----------------~~~~s~~~~~~l~~lga~~vid~~~~~~~--~~-~~g~DvV~d~~g--~~~~~l~~l~~gG~v  208 (280)
                                       +++.++++.++++++|+++++++++....  .. .+++|.+||++|  .+..++.+++.+|++
T Consensus       159 vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~  238 (324)
T cd08288         159 VGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTVGGHTLANVLAQTRYGGAV  238 (324)
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhhhccCcccEEEECCcHHHHHHHHHHhcCCCEE
Confidence                             45677888999999999999988753321  11 146899999998  467888999999999


Q ss_pred             EEEcCCCC---CC--------ceEEEE--------eecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCC
Q 023571          209 VALTGAVT---PP--------GFRFVV--------TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK  269 (280)
Q Consensus       209 V~~g~~~~---~~--------~~~~~~--------~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~  269 (280)
                      +.+|....   ..        ...+..        ....+.++.+.+++.+|.+++. .  +.++++++.+|++.+++++
T Consensus       239 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~--~~~~~~~~~~a~~~~~~~~  315 (324)
T cd08288         239 AACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEAL-T--REIPLADVPDAAEAILAGQ  315 (324)
T ss_pred             EEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCcccc-c--eeecHHHHHHHHHHHhcCC
Confidence            99876421   00        111110        0124567788888999988753 2  4899999999999999999


Q ss_pred             CCeeEEEEe
Q 023571          270 ATGKVVIHP  278 (280)
Q Consensus       270 ~~gkvVv~~  278 (280)
                      ..||+|+++
T Consensus       316 ~~~~vvv~~  324 (324)
T cd08288         316 VRGRVVVDV  324 (324)
T ss_pred             ccCeEEEeC
Confidence            889999864

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.64  E-value=2.6e-14  Score=129.30  Aligned_cols=190  Identities=25%  Similarity=0.400  Sum_probs=137.0

Q ss_pred             eeEEEEcccCCCc---cEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE----------
Q 023571           84 MKAWLYGEYGGVD---VLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV----------  150 (280)
Q Consensus        84 mka~~~~~~g~~~---~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~----------  150 (280)
                      |||+++.+.+++.   .+.+. +.+.|.+.+++|+|++.++++|+.|++.+.|.++  ....|.++|||+          
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~   77 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDI-ELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP--VPGQPKILGWDASGVVEAVGSE   77 (336)
T ss_pred             CceEEecCCCCCCcccceeEc-cCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC--CCCCCcccccceEEEEEEcCCC
Confidence            6899999888764   57777 8888999999999999999999999998877543  112233333333          


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        78 v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g  157 (336)
T cd08252          78 VTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIG  157 (336)
T ss_pred             CCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEc
Confidence                                                                                            


Q ss_pred             ----------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEEeCCC---CHHHHHh
Q 023571          151 ----------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG---QCDRAVK  200 (280)
Q Consensus       151 ----------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g---~~~~~l~  200 (280)
                                            +++.++++.++++++|++++++++. ++.+.     .+++|++|||+|   .+..+++
T Consensus       158 ~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~  236 (336)
T cd08252         158 GAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAE  236 (336)
T ss_pred             CCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHH
Confidence                                  3334556677777788888887764 33221     157999999987   5789999


Q ss_pred             ccccCCEEEEEcCCCCC--------CceEEE---Ee-----------ecHHHHHHHHHHHHCCCceeecCC-Ccccchhh
Q 023571          201 AIKEGGTVVALTGAVTP--------PGFRFV---VT-----------SNGEVLKKLNPYLESGKVKPIIDP-KGPFPFSQ  257 (280)
Q Consensus       201 ~l~~gG~vV~~g~~~~~--------~~~~~~---~~-----------~~~~~l~~l~~ll~~G~l~~~~~~-~~~~~l~~  257 (280)
                      +++++|+++.+|.....        ....+.   +.           ...+.++++++++++|.+++.... .+.+++++
T Consensus       237 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  316 (336)
T cd08252         237 LIAPQGHICLIVDPQEPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAEN  316 (336)
T ss_pred             HhcCCCEEEEecCCCCcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHH
Confidence            99999999999854311        111110   10           113568889999999999865321 13589999


Q ss_pred             HHHHHHHHHhCCCCeeEEEE
Q 023571          258 VVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       258 v~~A~~~l~~~~~~gkvVv~  277 (280)
                      +.+|++.+.+++..+|+|++
T Consensus       317 ~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         317 LREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             HHHHHHHHHcCCccceEEeC
Confidence            99999999999888998874

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=99.64  E-value=4.9e-15  Score=136.36  Aligned_cols=125  Identities=22%  Similarity=0.249  Sum_probs=91.8

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCC--CC--
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVT--PP--  218 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~--~~--  218 (280)
                      +++.+++|.+.++++|++.++++.+.++.+.     .+++|+++||+|   .+..++++++++|+++.+|....  ..  
T Consensus       216 ~~~~~~~k~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  295 (365)
T cd08278         216 AVDIVDSRLELAKELGATHVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTL  295 (365)
T ss_pred             EEeCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCcccc
Confidence            4556778888888999999999887665432     258999999997   47899999999999999986521  11  


Q ss_pred             --------ceEEEE-----eecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          219 --------GFRFVV-----TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       219 --------~~~~~~-----~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                              ...+..     ....+.++++++++++|.+++.... ..|+++++.+|++.+++++. -|+||+
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~-~k~~~~  365 (365)
T cd08278         296 DVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKV-IKPVLR  365 (365)
T ss_pred             CHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCc-eEEEEC
Confidence                    111111     1124678899999999998542221 37999999999999998765 478764

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=99.64  E-value=1e-14  Score=135.22  Aligned_cols=127  Identities=23%  Similarity=0.299  Sum_probs=91.8

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCC-ccccC------CCccEEEeCCC------------------------CHHHHH
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDN-FEDLP------EKFDVVYDAIG------------------------QCDRAV  199 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~-~~~~~------~g~DvV~d~~g------------------------~~~~~l  199 (280)
                      +++.++++.+++++++...++++...+ +.+.+      +++|+||||+|                        .+..++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (386)
T cd08283         214 AIDRVPERLEMARSHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAI  293 (386)
T ss_pred             EEcCCHHHHHHHHHcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHH
Confidence            345677888888887444678777653 43321      47999999986                        267899


Q ss_pred             hccccCCEEEEEcCCCCC-C--c--------eEE--EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHH
Q 023571          200 KAIKEGGTVVALTGAVTP-P--G--------FRF--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIE  266 (280)
Q Consensus       200 ~~l~~gG~vV~~g~~~~~-~--~--------~~~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~  266 (280)
                      ++++++|+++.+|..... .  .        ..+  ......+.++++++++++|.+.+....++.|+++++.+|++.+.
T Consensus       294 ~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~  373 (386)
T cd08283         294 QAVRKGGTVSIIGVYGGTVNKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFD  373 (386)
T ss_pred             HHhccCCEEEEEcCCCCCcCccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHH
Confidence            999999999999865421 1  1        011  11123577899999999999986432235899999999999999


Q ss_pred             hCC-CCeeEEEE
Q 023571          267 TNK-ATGKVVIH  277 (280)
Q Consensus       267 ~~~-~~gkvVv~  277 (280)
                      +++ ..+|+||+
T Consensus       374 ~~~~~~~k~~~~  385 (386)
T cd08283         374 KKEDGCIKVVLK  385 (386)
T ss_pred             hCCCCeEEEEec
Confidence            887 45899985

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.64  E-value=4.1e-14  Score=125.55  Aligned_cols=189  Identities=43%  Similarity=0.707  Sum_probs=137.8

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCC-CCCCCCcccCceE------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA-TDSPLPTVPGYDV------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~-~~~~~P~i~G~e~------------  150 (280)
                      |||+++...+..+.+.+. +.+.|.+++|||+|+|.++++|+.|++...|.+.. .....|.++|||+            
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~   79 (309)
T cd05289           1 MKAVRIHEYGGPEVLELA-DVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVT   79 (309)
T ss_pred             CceEEEcccCCccceeec-ccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCC
Confidence            789999887776667777 77888899999999999999999999988775420 0011233333333            


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        80 ~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~  159 (309)
T cd05289          80 GFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGS  159 (309)
T ss_pred             CCCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHH
Confidence                                                                                            


Q ss_pred             --------------EEecChhhHHHHHhCCCCEEEeCCCCCccc--cCCCccEEEeCCC--CHHHHHhccccCCEEEEEc
Q 023571          151 --------------AATSSTRNLEFLKSLGADLAIDYTKDNFED--LPEKFDVVYDAIG--QCDRAVKAIKEGGTVVALT  212 (280)
Q Consensus       151 --------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~--~~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g  212 (280)
                                    +++.++ +.++++++|++.++++...++..  ..+++|++|||+|  ....++++++++|+++.+|
T Consensus       160 ~~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~g  238 (309)
T cd05289         160 FAVQLAKARGARVIATASAA-NADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGETLARSLALVKPGGRLVSIA  238 (309)
T ss_pred             HHHHHHHHcCCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhhccCCCCceEEEECCchHHHHHHHHHHhcCcEEEEEc
Confidence                          233334 66777778888888777655542  2357999999998  5789999999999999998


Q ss_pred             CCCCCC------ceEE---EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 023571          213 GAVTPP------GFRF---VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI  276 (280)
Q Consensus       213 ~~~~~~------~~~~---~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv  276 (280)
                      ......      ...+   .+....+.+.++++++++|.+++...  +.|+++++.+|++.+..++..+|+|+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         239 GPPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVD--RVFPLEDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             CCCcchhhhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEeec--cEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence            654311      1111   11222678999999999999886543  58999999999999999887788774

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=99.64  E-value=1.2e-14  Score=132.06  Aligned_cols=125  Identities=26%  Similarity=0.336  Sum_probs=92.3

Q ss_pred             EecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCC--C--
Q 023571          152 ATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTP--P--  218 (280)
Q Consensus       152 ~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~--~--  218 (280)
                      ++.++++.++++++|+++++++++.++.+.      .+++|+||||+|   .+..++++++++|+++.++.....  .  
T Consensus       196 ~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~  275 (343)
T cd08235         196 SDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNI  275 (343)
T ss_pred             ECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCccc
Confidence            345667777777788888888887665442      146999999988   468899999999999999864421  1  


Q ss_pred             --------ceE--EEEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          219 --------GFR--FVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       219 --------~~~--~~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                              .+.  .......+.++++++++++|.+++......+|+++++.+|++.+.+++ .+|+|+.
T Consensus       276 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         276 DPNLIHYREITITGSYAASPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             CHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence                    111  112224577899999999999874211224799999999999999999 8999873

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=99.64  E-value=1.3e-14  Score=133.45  Aligned_cols=126  Identities=21%  Similarity=0.329  Sum_probs=95.8

Q ss_pred             EecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCC--C--
Q 023571          152 ATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTP--P--  218 (280)
Q Consensus       152 ~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~--~--  218 (280)
                      ++.++++.++++++|++.+++++..++.+.      .+++|+||||+|   .+..++++|+++|+++.++.....  .  
T Consensus       218 ~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  297 (367)
T cd08263         218 VDVRDEKLAKAKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEI  297 (367)
T ss_pred             EeCCHHHHHHHHHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccc
Confidence            446778888888899999999887665432      257999999988   367899999999999999865321  0  


Q ss_pred             --------ceEEEE---eecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          219 --------GFRFVV---TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       219 --------~~~~~~---~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                              ...+..   ...++.++++++++++|.+++....++.|+++++.+|++.+++++..||+||+
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         298 PITRLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             CHHHHhhCCeEEEecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence                    111111   11247899999999999998754333589999999999999999888999984

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=99.64  E-value=2.6e-14  Score=129.34  Aligned_cols=185  Identities=31%  Similarity=0.421  Sum_probs=134.2

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++.+++   .+++. +.+.|.+.+|||+|+|+++++|+.|++...|.++..   +|.++|+|+             
T Consensus         1 ~~a~~~~~~~---~~~~~-~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~---~p~~~g~~~~G~v~~vG~~v~~   73 (334)
T cd08234           1 MKALVYEGPG---ELEVE-EVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAA---PPLVPGHEFAGVVVAVGSKVTG   73 (334)
T ss_pred             CeeEEecCCC---ceEEE-eccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCC---CCcccccceEEEEEEeCCCCCC
Confidence            7899998765   48888 899999999999999999999999999987765311   111111111             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        74 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~  153 (334)
T cd08234          74 FKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLD  153 (334)
T ss_pred             CCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhhhHHHHHHHHHH
Confidence                                                                                            


Q ss_pred             -----------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccc----cCCCccEEEeC
Q 023571          151 -----------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFED----LPEKFDVVYDA  191 (280)
Q Consensus       151 -----------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~----~~~g~DvV~d~  191 (280)
                                                         +++.++++.++++++|++.++++...++..    ..+++|++|||
T Consensus       154 ~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~  233 (334)
T cd08234         154 LLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDVVIEA  233 (334)
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcEEEEC
Confidence                                               344566667777777777777776654321    23679999999


Q ss_pred             CC---CHHHHHhccccCCEEEEEcCCCCC--Cc----------eEE-EEeecHHHHHHHHHHHHCCCceeecCCCcccch
Q 023571          192 IG---QCDRAVKAIKEGGTVVALTGAVTP--PG----------FRF-VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPF  255 (280)
Q Consensus       192 ~g---~~~~~l~~l~~gG~vV~~g~~~~~--~~----------~~~-~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l  255 (280)
                      +|   .+..++++|+++|+++.+|.....  ..          +.+ ......+.++++++++++|.+++....+.+|++
T Consensus       234 ~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  313 (334)
T cd08234         234 TGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSHRLPL  313 (334)
T ss_pred             CCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEEEEecH
Confidence            87   478899999999999999865421  10          111 112245778999999999998754322247999


Q ss_pred             hhHHHHHHHHHhCCCCeeEEE
Q 023571          256 SQVVEAFSYIETNKATGKVVI  276 (280)
Q Consensus       256 ~~v~~A~~~l~~~~~~gkvVv  276 (280)
                      +++.+|++.+.+ +..||+|+
T Consensus       314 ~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         314 EEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             HHHHHHHHHHhc-CCceEEEe
Confidence            999999999998 77789886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=99.64  E-value=1.6e-14  Score=131.03  Aligned_cols=126  Identities=33%  Similarity=0.457  Sum_probs=96.5

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCccccC------CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCC---
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP---  218 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~---  218 (280)
                      +++.++++.++++++|++++++++..++.+.+      +++|++|||+|   .+..++++|+++|+++.+|......   
T Consensus       188 ~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~  267 (337)
T cd08261         188 VVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFP  267 (337)
T ss_pred             EECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccC
Confidence            45577888888888999999999876654422      46999999986   4788999999999999987554211   


Q ss_pred             -------ceEEE--EeecHHHHHHHHHHHHCCCcee--ecCCCcccchhhHHHHHHHHHhCC-CCeeEEEEe
Q 023571          219 -------GFRFV--VTSNGEVLKKLNPYLESGKVKP--IIDPKGPFPFSQVVEAFSYIETNK-ATGKVVIHP  278 (280)
Q Consensus       219 -------~~~~~--~~~~~~~l~~l~~ll~~G~l~~--~~~~~~~~~l~~v~~A~~~l~~~~-~~gkvVv~~  278 (280)
                             .+.+.  .....+.++++++++++|.+++  ...  .+++++++.+|++.+.+++ ..+|+|+++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         268 DPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALIT--HRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             HHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheE--EEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence                   11111  1234578899999999999987  433  4899999999999999884 679999864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.63  E-value=5.1e-14  Score=126.26  Aligned_cols=190  Identities=31%  Similarity=0.478  Sum_probs=138.6

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++.++++.+.++++ +.+.|.+.+++|+|+|.++++|+.|+....|....  ...|.++|||+             
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~   77 (325)
T cd08271           1 MKAWVLPKPGAALQLTLE-EIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA--WSYPHVPGVDGAGVVVAVGAKVTG   77 (325)
T ss_pred             CeeEEEccCCCcceeEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCcccccceEEEEEEeCCCCCc
Confidence            799999988753458999 89999999999999999999999999987765421  11133334433             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        78 ~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~  157 (325)
T cd08271          78 WKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSF  157 (325)
T ss_pred             CCCCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHH
Confidence                                                                                            


Q ss_pred             ------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEE
Q 023571          151 ------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVA  210 (280)
Q Consensus       151 ------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~  210 (280)
                                  +.+.++++.+++..+|++.+++....++...      .+++|+++||.|  ....++++++++|+++.
T Consensus       158 ~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~  237 (325)
T cd08271         158 AVQLAKRAGLRVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVC  237 (325)
T ss_pred             HHHHHHHcCCEEEEEEcHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEE
Confidence                        2223566777777788888887766554321      257999999988  46778999999999999


Q ss_pred             EcCCCCC-------CceEE---EE------------eecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhC
Q 023571          211 LTGAVTP-------PGFRF---VV------------TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETN  268 (280)
Q Consensus       211 ~g~~~~~-------~~~~~---~~------------~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~  268 (280)
                      ++.....       ....+   .+            ...++.+.+++++++++.+++...  +.|+++++.++++.+.++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~a~~~~~~~  315 (325)
T cd08271         238 IQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVI--EVLPFEQLPEALRALKDR  315 (325)
T ss_pred             EcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccc--eEEcHHHHHHHHHHHHcC
Confidence            8744321       00111   00            012245678889999999986533  589999999999999998


Q ss_pred             CCCeeEEEEe
Q 023571          269 KATGKVVIHP  278 (280)
Q Consensus       269 ~~~gkvVv~~  278 (280)
                      +..+|+|+++
T Consensus       316 ~~~~kiv~~~  325 (325)
T cd08271         316 HTRGKIVVTI  325 (325)
T ss_pred             CccceEEEEC
Confidence            8889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.63  E-value=3.6e-14  Score=128.01  Aligned_cols=187  Identities=33%  Similarity=0.540  Sum_probs=140.5

Q ss_pred             eEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE--------------
Q 023571           85 KAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV--------------  150 (280)
Q Consensus        85 ka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~--------------  150 (280)
                      ||+.+...+.+..+++. +.+.|.|.++||+|+|.++++|+.|++++.|.++. ...+|.++|+|+              
T Consensus         2 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~   79 (331)
T cd08273           2 REVVVTRRGGPEVLKVV-EADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPD-QPPLPFTPGYDLVGRVDALGSGVTGF   79 (331)
T ss_pred             eeEEEccCCCcccEEEe-ccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCC-CCCCCcccccceEEEEEEeCCCCccC
Confidence            78999988887789999 89999999999999999999999999999887642 123566677766              


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~  159 (331)
T cd08273          80 EVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLEL  159 (331)
T ss_pred             CCCCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHH
Confidence                                                                                            


Q ss_pred             --------EEecChhhHHHHHhCCCCEEEeCCCCCccc--c-CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCCC
Q 023571          151 --------AATSSTRNLEFLKSLGADLAIDYTKDNFED--L-PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVTP  217 (280)
Q Consensus       151 --------~~~~s~~~~~~l~~lga~~vid~~~~~~~~--~-~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~~  217 (280)
                              +.+.++++.++++++|++. +++...++..  . .+++|+++||+|  .+..++++++.+|+++.+|.....
T Consensus       160 a~~~g~~v~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~  238 (331)
T cd08273         160 ALLAGAEVYGTASERNHAALRELGATP-IDYRTKDWLPAMLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSL  238 (331)
T ss_pred             HHHcCCEEEEEeCHHHHHHHHHcCCeE-EcCCCcchhhhhccCCCceEEEECCchHHHHHHHHHhcCCCEEEEEccCCCC
Confidence                    2222366777777788653 4555444322  1 257999999988  578999999999999999865421


Q ss_pred             Cc-------------------eE-----E---EEe--------ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHH
Q 023571          218 PG-------------------FR-----F---VVT--------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAF  262 (280)
Q Consensus       218 ~~-------------------~~-----~---~~~--------~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~  262 (280)
                      ..                   ..     +   ...        ...+.++++++++++|.+++...  +.|+++++.+|+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~a~  316 (331)
T cd08273         239 LQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIA--KRLPLSEVAEAH  316 (331)
T ss_pred             CCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcc--eEEcHHHHHHHH
Confidence            11                   00     0   101        12367888999999999986543  489999999999


Q ss_pred             HHHHhCCCCeeEEE
Q 023571          263 SYIETNKATGKVVI  276 (280)
Q Consensus       263 ~~l~~~~~~gkvVv  276 (280)
                      +.+.+++..||+|+
T Consensus       317 ~~~~~~~~~gkvv~  330 (331)
T cd08273         317 RLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHcCCCcceEEe
Confidence            99999888899886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05281 TDH Threonine dehydrogenase

Probab=99.63  E-value=1.4e-14  Score=131.91  Aligned_cols=125  Identities=27%  Similarity=0.386  Sum_probs=91.4

Q ss_pred             ecChhhHHHHHhCCCCEEEeCCCCCccc---c--CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCce----
Q 023571          153 TSSTRNLEFLKSLGADLAIDYTKDNFED---L--PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF----  220 (280)
Q Consensus       153 ~~s~~~~~~l~~lga~~vid~~~~~~~~---~--~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~----  220 (280)
                      ..+++|.+.++++|++++++++..++..   .  .+++|++|||+|   .+..++++|+++|+++.+|.......+    
T Consensus       195 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~  274 (341)
T cd05281         195 DPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNN  274 (341)
T ss_pred             CCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccch
Confidence            3567777888889998888887665531   1  257999999987   368999999999999999754421111    


Q ss_pred             -------EEEE---eecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          221 -------RFVV---TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       221 -------~~~~---~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                             .+..   ....+.++++.+++++|.+++....+..++++++.+|++.+.+++ .||+|+++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         275 LVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             hhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence                   1111   112466788999999999864322224789999999999999999 89999863

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=99.63  E-value=1e-14  Score=132.73  Aligned_cols=123  Identities=15%  Similarity=0.193  Sum_probs=90.3

Q ss_pred             cChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCce----
Q 023571          154 SSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF----  220 (280)
Q Consensus       154 ~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~----  220 (280)
                      .++++.+.++++|++.+++++..++.+.      .+++|+++||+|   .+..++++++++|+++.+|.......+    
T Consensus       201 ~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~  280 (345)
T cd08287         201 RHEDRQALAREFGATDIVAERGEEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRE  280 (345)
T ss_pred             CCHHHHHHHHHcCCceEecCCcccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHH
Confidence            4455667777888888888877655432      147999999997   478999999999999998765421111    


Q ss_pred             ------EE--EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          221 ------RF--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       221 ------~~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                            .+  ......+.++++++++++|.+++....++.|+++++.+|++.++.++. .|++|+
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~  344 (345)
T cd08287         281 LFFRNVGLAGGPAPVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRA-IKVLLR  344 (345)
T ss_pred             HHhcceEEEEecCCcHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCc-eEEEeC
Confidence                  11  112235789999999999999864322358999999999999987665 489885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.63  E-value=4e-14  Score=127.89  Aligned_cols=119  Identities=25%  Similarity=0.321  Sum_probs=88.2

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCccccCCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCC-CCceEE----
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVT-PPGFRF----  222 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~-~~~~~~----  222 (280)
                      +++.++++.++++++|++.+++++..    ..+++|+++++.+   .++.++++++++|+++.+|.... ...+.+    
T Consensus       196 ~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  271 (329)
T cd08298         196 AFTRSGEHQELARELGADWAGDSDDL----PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYELLW  271 (329)
T ss_pred             EEcCChHHHHHHHHhCCcEEeccCcc----CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhhhh
Confidence            45556677777877888777776532    1257999999865   58899999999999998875331 111110    


Q ss_pred             -------EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 023571          223 -------VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI  276 (280)
Q Consensus       223 -------~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv  276 (280)
                             ......+.++++++++++|.+++.   ++.|+++++.+|++.++.++..||+|+
T Consensus       272 ~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         272 GEKTIRSVANLTRQDGEEFLKLAAEIPIKPE---VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHcCCCCce---EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence                   112345778999999999998864   248999999999999999998899874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.62  E-value=5.9e-14  Score=124.89  Aligned_cols=188  Identities=29%  Similarity=0.477  Sum_probs=138.3

Q ss_pred             eEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE--------------
Q 023571           85 KAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV--------------  150 (280)
Q Consensus        85 ka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~--------------  150 (280)
                      ||+.+...+.+..+.+. +.+.+.+.++||+|+|.++|+|+.|++...|.++.   .+|.++|+|+              
T Consensus         1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~---~~~~~~g~e~~G~v~~~g~~~~~~   76 (320)
T cd05286           1 KAVRIHKTGGPEVLEYE-DVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL---PLPFVLGVEGAGVVEAVGPGVTGF   76 (320)
T ss_pred             CeEEEecCCCccceEEe-ecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC---CCCccCCcceeEEEEEECCCCCCC
Confidence            46677666666667887 77777889999999999999999999988776531   2222333333              


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        77 ~~G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~  156 (320)
T cd05286          77 KVGDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQW  156 (320)
T ss_pred             CCCCEEEEecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHH
Confidence                                                                                            


Q ss_pred             ---------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEEcC
Q 023571          151 ---------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTG  213 (280)
Q Consensus       151 ---------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~  213 (280)
                               +++.++++.++++++|++.++++...++.+.      .+++|++|||.|  .+..++++++++|+++.+|.
T Consensus       157 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~  236 (320)
T cd05286         157 AKALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGN  236 (320)
T ss_pred             HHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEec
Confidence                     4556778888888899999888776554332      257999999987  57889999999999999986


Q ss_pred             CCCC-----------CceEEE------Eee----cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCe
Q 023571          214 AVTP-----------PGFRFV------VTS----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATG  272 (280)
Q Consensus       214 ~~~~-----------~~~~~~------~~~----~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~g  272 (280)
                      ....           ..+.+.      +..    ..+.+++++++++++.+.+...  +.|+++++.+|++.+.+++..+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~~~~~~~~  314 (320)
T cd05286         237 ASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIG--KRYPLADAAQAHRDLESRKTTG  314 (320)
T ss_pred             CCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCccc--ceEcHHHHHHHHHHHHcCCCCc
Confidence            4321           011111      001    1245677889999999886533  4899999999999999988889


Q ss_pred             eEEEEe
Q 023571          273 KVVIHP  278 (280)
Q Consensus       273 kvVv~~  278 (280)
                      |+|+++
T Consensus       315 ~vv~~~  320 (320)
T cd05286         315 KLLLIP  320 (320)
T ss_pred             eEEEeC
Confidence            998853

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=99.61  E-value=4.2e-14  Score=130.00  Aligned_cols=125  Identities=18%  Similarity=0.277  Sum_probs=91.5

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCC--CC-
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVT--PP-  218 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~--~~-  218 (280)
                      +++.++++.++++++|++++++++..++...      .+++|++|||+|   .+..++++|+++|+++.+|....  .. 
T Consensus       212 ~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  291 (363)
T cd08279         212 AVDPVPEKLELARRFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVS  291 (363)
T ss_pred             EEcCCHHHHHHHHHhCCeEEeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccc
Confidence            3456777888888899999998877655432      257999999988   46899999999999999975431  10 


Q ss_pred             ---------ceEEE---E--eecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEE
Q 023571          219 ---------GFRFV---V--TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVV  275 (280)
Q Consensus       219 ---------~~~~~---~--~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvV  275 (280)
                               ...+.   +  ....+.++++++++++|.+++....+++|+++++.+|++.+++++..+.++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         292 LPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             cCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence                     00001   1  124678999999999999876321224799999999999999888765444

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=99.60  E-value=4.5e-14  Score=128.37  Aligned_cols=122  Identities=23%  Similarity=0.345  Sum_probs=89.0

Q ss_pred             cChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCC-------
Q 023571          154 SSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTP-------  217 (280)
Q Consensus       154 ~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~-------  217 (280)
                      .++++.++++++|++ +++++..++...      .+++|++|||+|   .+..++++++++|++|.+|.....       
T Consensus       200 ~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~  278 (344)
T cd08284         200 PVPERLERAAALGAE-PINFEDAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGL  278 (344)
T ss_pred             CCHHHHHHHHHhCCe-EEecCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHH
Confidence            455666777777764 466665554332      257999999988   478999999999999999866411       


Q ss_pred             ----CceEE--EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 023571          218 ----PGFRF--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       218 ----~~~~~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                          ....+  ......+.++++++++++|.+++....++.|+++++.+|++.+++++. +|+|++
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         279 DAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             HHhhcCcEEEEecCCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence                01111  223456889999999999998764322348999999999999998877 999985

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.59  E-value=9e-14  Score=124.28  Aligned_cols=180  Identities=21%  Similarity=0.231  Sum_probs=132.8

Q ss_pred             ccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHH-cCCCCCCCCCCCcccCceE------------------------
Q 023571           96 DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRR-QGKFKATDSPLPTVPGYDV------------------------  150 (280)
Q Consensus        96 ~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~-~g~~~~~~~~~P~i~G~e~------------------------  150 (280)
                      +.+++. +.+.|.+.++||+|+|.++++|+.|++.+ .|..+......|.++|+|+                        
T Consensus         5 ~~~~~~-~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~   83 (312)
T cd08269           5 GRFEVE-EHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS   83 (312)
T ss_pred             CeeEEE-ECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec
Confidence            458889 89999999999999999999999999988 7754311122466777777                        


Q ss_pred             ---------------------------------------------------------------------------EEecC
Q 023571          151 ---------------------------------------------------------------------------AATSS  155 (280)
Q Consensus       151 ---------------------------------------------------------------------------~~~~s  155 (280)
                                                                                                 ++..+
T Consensus        84 ~g~~~~~~~v~~~~~~~lP~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~  163 (312)
T cd08269          84 GGAFAEYDLADADHAVPLPSLLDGQAFPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRR  163 (312)
T ss_pred             CCcceeeEEEchhheEECCCchhhhHHhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence                                                                                       34445


Q ss_pred             hhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCC-CC-------
Q 023571          156 TRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVT-PP-------  218 (280)
Q Consensus       156 ~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~-~~-------  218 (280)
                      +++.++++++|++.++++...++.+.      .+++|+++||.|   .+..++++|+++|+++.+|.... +.       
T Consensus       164 ~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~  243 (312)
T cd08269         164 PARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTW  243 (312)
T ss_pred             HHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHH
Confidence            66777777888888887665554332      257999999987   47899999999999999986531 10       


Q ss_pred             ---ceEE--EE----eecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCC-CeeEEE
Q 023571          219 ---GFRF--VV----TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKA-TGKVVI  276 (280)
Q Consensus       219 ---~~~~--~~----~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~-~gkvVv  276 (280)
                         ...+  ..    ....+.++++++++++|.+++....++.|+++++.+|++.+.+++. .+|+|+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         244 NWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             hhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence               0111  11    1124789999999999999864322247999999999999999864 688886

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.58  E-value=2.8e-13  Score=122.08  Aligned_cols=190  Identities=33%  Similarity=0.520  Sum_probs=138.0

Q ss_pred             eEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE--------------
Q 023571           85 KAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV--------------  150 (280)
Q Consensus        85 ka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~--------------  150 (280)
                      ||+.+...+....+.+. +.+.|.+++++|+|+|.++|+|+.|++.+.|.++. ....|.++|+|+              
T Consensus         1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~~~   78 (337)
T cd08275           1 RAVVLTGFGGLDKLKVE-KEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS-APKPPFVPGFECAGTVEAVGEGVKDF   78 (337)
T ss_pred             CeEEEcCCCCccceEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCcceeEEEEEEECCCCcCC
Confidence            45666666655568888 77888899999999999999999999998886541 223455666666              


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~  158 (337)
T cd08275          79 KVGDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQL  158 (337)
T ss_pred             CCCCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHH
Confidence                                                                                            


Q ss_pred             -------EEe--cChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCC
Q 023571          151 -------AAT--SSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGA  214 (280)
Q Consensus       151 -------~~~--~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~  214 (280)
                             .++  ..+++.++++.+|++.+++++..++...     .+++|+++||+|  .+..++++++++|+++.+|..
T Consensus       159 a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~  238 (337)
T cd08275         159 CKTVPNVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAA  238 (337)
T ss_pred             HHHccCcEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHHHHHHHHHhhccCcEEEEEeec
Confidence                   111  1233677777788888888876555332     257999999998  578899999999999999865


Q ss_pred             CCC----C-----------------------ceEE---EEe-------ecHHHHHHHHHHHHCCCceeecCCCcccchhh
Q 023571          215 VTP----P-----------------------GFRF---VVT-------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQ  257 (280)
Q Consensus       215 ~~~----~-----------------------~~~~---~~~-------~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~  257 (280)
                      ...    .                       ...+   .+.       .....+.++++++++|.+++...  +.|++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  316 (337)
T cd08275         239 NLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKID--SVFPFEE  316 (337)
T ss_pred             CCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCcee--eEEcHHH
Confidence            311    0                       0000   000       01235778889999999876643  4899999


Q ss_pred             HHHHHHHHHhCCCCeeEEEEe
Q 023571          258 VVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       258 v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      ++++++.+..++..||+|+++
T Consensus       317 ~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         317 VGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHHHHHcCCCcceEEEeC
Confidence            999999999988889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=99.58  E-value=1.2e-13  Score=125.69  Aligned_cols=123  Identities=24%  Similarity=0.372  Sum_probs=88.2

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc----C--CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCC---
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL----P--EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP---  218 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~----~--~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~---  218 (280)
                      +++.++++.++++++|++.+++++... .+.    .  +++|++|||+|   .+..++++|+++|+++.+|......   
T Consensus       189 ~~~~~~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  267 (343)
T cd08236         189 AVDIDDEKLAVARELGADDTINPKEED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLS  267 (343)
T ss_pred             EEcCCHHHHHHHHHcCCCEEecCcccc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccc
Confidence            344466777888888888888887654 221    1  46999999987   4789999999999999998543210   


Q ss_pred             ----------ceEE---EEe----ecHHHHHHHHHHHHCCCce--eecCCCcccchhhHHHHHHHHHh-CCCCeeEEE
Q 023571          219 ----------GFRF---VVT----SNGEVLKKLNPYLESGKVK--PIIDPKGPFPFSQVVEAFSYIET-NKATGKVVI  276 (280)
Q Consensus       219 ----------~~~~---~~~----~~~~~l~~l~~ll~~G~l~--~~~~~~~~~~l~~v~~A~~~l~~-~~~~gkvVv  276 (280)
                                ...+   ...    ..++.++++++++++|.++  +...  ..+++++++++++.+++ +...||+|+
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         268 EEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLIT--HRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             cCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHhee--eeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence                      0111   111    1256788999999999986  3333  48999999999999998 556688874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.58  E-value=3.6e-13  Score=120.34  Aligned_cols=191  Identities=30%  Similarity=0.495  Sum_probs=140.5

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+.+...+.+..+.+. +.+.|.+++++|+|+|.++++|+.|++...|.++. ...+|.++|||+             
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~vg~~~~~   78 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLV-EVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPP-PPGASDILGLEVAGEVVAVGEGVSR   78 (325)
T ss_pred             CceEEEccCCCcccceEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCCCCccceeEEEEEEeCCCCCC
Confidence            788888877766667787 77777789999999999999999999988776641 223455666665             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~  158 (325)
T TIGR02824        79 WKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQ  158 (325)
T ss_pred             CCCCCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHH
Confidence                                                                                            


Q ss_pred             ----------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEEc
Q 023571          151 ----------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALT  212 (280)
Q Consensus       151 ----------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g  212 (280)
                                +++.++++.++++++|++.+++....++.+.      .+++|+++||+|  .+..++++++++|+++.+|
T Consensus       159 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g  238 (325)
T TIGR02824       159 LAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIG  238 (325)
T ss_pred             HHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEe
Confidence                      4445666777777788877777765444332      147999999988  5788999999999999998


Q ss_pred             CCCCC-----------CceEEEE---ee---------cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCC
Q 023571          213 GAVTP-----------PGFRFVV---TS---------NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK  269 (280)
Q Consensus       213 ~~~~~-----------~~~~~~~---~~---------~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~  269 (280)
                      .....           ....+..   ..         ..+.+.+++++++++.+++...  +.|+++++.++++.+..+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~  316 (325)
T TIGR02824       239 FQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVID--KVFPLEDAAQAHALMESGD  316 (325)
T ss_pred             cCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccc--cEEeHHHHHHHHHHHHhCC
Confidence            64310           0111110   00         1245677888999999876533  5899999999999999988


Q ss_pred             CCeeEEEEe
Q 023571          270 ATGKVVIHP  278 (280)
Q Consensus       270 ~~gkvVv~~  278 (280)
                      ..+|+|+++
T Consensus       317 ~~~~~v~~~  325 (325)
T TIGR02824       317 HIGKIVLTV  325 (325)
T ss_pred             CcceEEEeC
Confidence            889999864

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.57  E-value=2e-13  Score=123.14  Aligned_cols=124  Identities=28%  Similarity=0.413  Sum_probs=93.7

Q ss_pred             EEecChhhHHHHHh-CCCCEEEeCCCCCcccc-----CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCCCC----
Q 023571          151 AATSSTRNLEFLKS-LGADLAIDYTKDNFEDL-----PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVTPP----  218 (280)
Q Consensus       151 ~~~~s~~~~~~l~~-lga~~vid~~~~~~~~~-----~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~~~----  218 (280)
                      +++.++++.+++++ +|+++++++++.++.+.     .+++|++|||+|  .+..++++++++|+++.+|......    
T Consensus       175 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  254 (329)
T cd05288         175 GIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNATEP  254 (329)
T ss_pred             EEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchHHHHHHHHHhcCCCceEEEEeeccCcccccc
Confidence            45567788898888 99999999887655332     257999999998  5889999999999999998543211    


Q ss_pred             ------------ceEEE---Eeec----HHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 023571          219 ------------GFRFV---VTSN----GEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI  276 (280)
Q Consensus       219 ------------~~~~~---~~~~----~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv  276 (280)
                                  ...+.   +...    .+.+.++++++++|.+++....  .++++++.++++.+.+++..||+|+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~--~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         255 PGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDV--VEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             cccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccc--cccHHHHHHHHHHHhcCCCccceeC
Confidence                        01111   0111    3567889999999999876443  6899999999999999888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.57  E-value=2.5e-13  Score=121.54  Aligned_cols=191  Identities=31%  Similarity=0.560  Sum_probs=137.7

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      ||++++...+.+..+.+. +.+.|.+.+++|+|+|.++++|+.|+++..|.++. ...+|.++|||+             
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~~~~   78 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIE-ELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIE-PPPLPARLGYEAAGVVEAVGAGVTG   78 (328)
T ss_pred             CeEEEEeccCCcceeEEe-ecCCCCCCCCeEEEEEEEEecChHHhheeccccCC-CCCCCCCCCcceEEEEEeeCCCCCc
Confidence            788998877766678888 88888899999999999999999999987776531 112233344433             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g  158 (328)
T cd08268          79 FAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVG  158 (328)
T ss_pred             CCCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHH
Confidence                                                                                            


Q ss_pred             ---------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCE
Q 023571          151 ---------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGT  207 (280)
Q Consensus       151 ---------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~  207 (280)
                                     +++.+.++.++++++|++.++++....+...      .+++|++++|.|  ....++++++++|+
T Consensus       159 ~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~  238 (328)
T cd08268         159 LAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGT  238 (328)
T ss_pred             HHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhccCCE
Confidence                           4455667777777788888887766544322      147999999988  57889999999999


Q ss_pred             EEEEcCCCCC---C--------ceEE---EE-------eecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHH
Q 023571          208 VVALTGAVTP---P--------GFRF---VV-------TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIE  266 (280)
Q Consensus       208 vV~~g~~~~~---~--------~~~~---~~-------~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~  266 (280)
                      ++.+|.....   .        ...+   .+       ......++.+.+++.++.+.+...  ..|+++++.++++.+.
T Consensus       239 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  316 (328)
T cd08268         239 LVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVD--RVFPFDDIVEAHRYLE  316 (328)
T ss_pred             EEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcc--cEEcHHHHHHHHHHHH
Confidence            9999754310   0        1111   11       011245666777788888876543  4899999999999999


Q ss_pred             hCCCCeeEEEEe
Q 023571          267 TNKATGKVVIHP  278 (280)
Q Consensus       267 ~~~~~gkvVv~~  278 (280)
                      .++..+|+|+++
T Consensus       317 ~~~~~~~vv~~~  328 (328)
T cd08268         317 SGQQIGKIVVTP  328 (328)
T ss_pred             cCCCCceEEEeC
Confidence            888888999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=99.57  E-value=1.8e-13  Score=126.45  Aligned_cols=122  Identities=20%  Similarity=0.363  Sum_probs=86.6

Q ss_pred             cChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEEeCCC-C-------------HHHHHhccccCCEEEEEcCC
Q 023571          154 SSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG-Q-------------CDRAVKAIKEGGTVVALTGA  214 (280)
Q Consensus       154 ~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g-~-------------~~~~l~~l~~gG~vV~~g~~  214 (280)
                      .++++.++++++|+ ..++++++++.+.     .+++|++|||+| .             +..++++++++|+++.+|..
T Consensus       209 ~~~~~~~~~~~~g~-~~v~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~  287 (375)
T cd08282         209 HVPERLDLAESIGA-IPIDFSDGDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVY  287 (375)
T ss_pred             CCHHHHHHHHHcCC-eEeccCcccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEecc
Confidence            45666677777777 3566665554332     147999999987 2             68999999999999888754


Q ss_pred             CCC-------------CceEE------------EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCC
Q 023571          215 VTP-------------PGFRF------------VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK  269 (280)
Q Consensus       215 ~~~-------------~~~~~------------~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~  269 (280)
                      ...             ..+.+            .....++.++.+++++++|.+++....++.|+++++++|++.+.+++
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~  367 (375)
T cd08282         288 VAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL  367 (375)
T ss_pred             CCcccccccccccCccccccHHHHHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC
Confidence            310             00110            00113467888999999999986422335899999999999999998


Q ss_pred             CCeeEEEE
Q 023571          270 ATGKVVIH  277 (280)
Q Consensus       270 ~~gkvVv~  277 (280)
                       .+|+|++
T Consensus       368 -~~kvvv~  374 (375)
T cd08282         368 -ETKVVIK  374 (375)
T ss_pred             -ceEEEeC
Confidence             8999985

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.57  E-value=4.7e-13  Score=119.38  Aligned_cols=189  Identities=35%  Similarity=0.514  Sum_probs=136.6

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCC-CCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVK-EDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~-~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~------------  150 (280)
                      |+|+++...+....+++. +.+ |.+. +++++|++.++++|+.|++...|.+.. ....|.++|+|+            
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~   77 (323)
T cd08241           1 MKAVVCKELGGPEDLVLE-EVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV-KPPLPFVPGSEVAGVVEAVGEGVT   77 (323)
T ss_pred             CeEEEEecCCCcceeEEe-cCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC-CCCCCCcccceeEEEEEEeCCCCC
Confidence            789998877766668888 777 7776 499999999999999999988775531 111233344433            


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        78 ~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~  157 (323)
T cd08241          78 GFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAV  157 (323)
T ss_pred             CCCCCCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHH
Confidence                                                                                            


Q ss_pred             -----------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEE
Q 023571          151 -----------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVAL  211 (280)
Q Consensus       151 -----------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~  211 (280)
                                 +++.++++.++++++|++.+++....++.+.      .+++|+++||+|  .+..++++++++|+++.+
T Consensus       158 ~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~  237 (323)
T cd08241         158 QLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVI  237 (323)
T ss_pred             HHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEE
Confidence                       4445566777777788888887766554332      257999999998  578899999999999998


Q ss_pred             cCCCCCCc-----------eEEEE---e--------ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCC
Q 023571          212 TGAVTPPG-----------FRFVV---T--------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK  269 (280)
Q Consensus       212 g~~~~~~~-----------~~~~~---~--------~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~  269 (280)
                      |.......           ..+..   .        ...+.+++++++++++.+++...  +.|+++++.++++.+.+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  315 (323)
T cd08241         238 GFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVS--AVFPLEQAAEALRALADRK  315 (323)
T ss_pred             ccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccc--eEEcHHHHHHHHHHHHhCC
Confidence            75431111           11111   0        02367788999999999876543  5899999999999999888


Q ss_pred             CCeeEEEE
Q 023571          270 ATGKVVIH  277 (280)
Q Consensus       270 ~~gkvVv~  277 (280)
                      ..+|++++
T Consensus       316 ~~~~vvv~  323 (323)
T cd08241         316 ATGKVVLT  323 (323)
T ss_pred             CCCcEEeC
Confidence            78888863

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=99.56  E-value=1.2e-13  Score=127.22  Aligned_cols=123  Identities=18%  Similarity=0.259  Sum_probs=91.0

Q ss_pred             ecChhhHHHHHhCCCCEEEeCCCC--Ccccc-----CCCccEEEeCCC---CHHHHHhccc-cCCEEEEEcCCC--CCCc
Q 023571          153 TSSTRNLEFLKSLGADLAIDYTKD--NFEDL-----PEKFDVVYDAIG---QCDRAVKAIK-EGGTVVALTGAV--TPPG  219 (280)
Q Consensus       153 ~~s~~~~~~l~~lga~~vid~~~~--~~~~~-----~~g~DvV~d~~g---~~~~~l~~l~-~gG~vV~~g~~~--~~~~  219 (280)
                      ..++++.++++++|+++++++.+.  ++.+.     .+++|+|||++|   .+..++++++ ++|+++.+|...  ....
T Consensus       215 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~  294 (365)
T cd05279         215 DINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEAT  294 (365)
T ss_pred             eCCHHHHHHHHHhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCcee
Confidence            357888999999999999988776  43221     258999999997   4789999999 999999997643  1111


Q ss_pred             e---------EE--E---EeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 023571          220 F---------RF--V---VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI  276 (280)
Q Consensus       220 ~---------~~--~---~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv  276 (280)
                      +         .+  .   -....+.+..+++++++|.+++....+++|+++++.+|++.+++++. .|+++
T Consensus       295 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~~~~~  364 (365)
T cd05279         295 LDPNDLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGES-IRTIL  364 (365)
T ss_pred             eCHHHHhcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCc-eeeee
Confidence            1         11  0   01345788999999999998864233458999999999999988765 35554

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.56  E-value=4e-13  Score=121.42  Aligned_cols=123  Identities=27%  Similarity=0.403  Sum_probs=91.6

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCccc-cCCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCc----eEE
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFED-LPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPG----FRF  222 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~-~~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~----~~~  222 (280)
                      +++.++++.++++++|++.++++....... ..+++|++|||++   .+..++++|+++|+++.++.......    ..+
T Consensus       191 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~  270 (330)
T cd08245         191 AITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPL  270 (330)
T ss_pred             EEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHH
Confidence            556777888888888988888776544321 2257999999976   47899999999999999976431110    000


Q ss_pred             ---------EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 023571          223 ---------VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI  276 (280)
Q Consensus       223 ---------~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv  276 (280)
                               ........++.+++++++|.+++..   +.|+++++.+|++.+.+++..||+|+
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~---~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         271 IMKRQSIAGSTHGGRADLQEALDFAAEGKVKPMI---ETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HhCCCEEEEeccCCHHHHHHHHHHHHcCCCcceE---EEEcHHHHHHHHHHHHcCCCCcceeC
Confidence                     1111457888999999999997533   47999999999999999988898875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.56  E-value=1.1e-13  Score=125.91  Aligned_cols=124  Identities=20%  Similarity=0.277  Sum_probs=90.4

Q ss_pred             cChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCc-----
Q 023571          154 SSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPG-----  219 (280)
Q Consensus       154 ~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~-----  219 (280)
                      .++++.++++++|++.++++...++.+.      .+++|++|||+|   .+..++++|+++|+++.+|.......     
T Consensus       194 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~  273 (340)
T TIGR00692       194 PNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTN  273 (340)
T ss_pred             CCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhh
Confidence            5566777788888888888876665432      257999999987   47889999999999999986531111     


Q ss_pred             ------eEEEE---eecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          220 ------FRFVV---TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       220 ------~~~~~---~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                            +.+..   ....+.+.++++++++|.++.....+..++++++.++++.+++++. ||+|+++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       274 KVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             hhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence                  11111   1134567889999999998732212348999999999999998874 9999864

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.56  E-value=2.2e-13  Score=123.67  Aligned_cols=128  Identities=22%  Similarity=0.338  Sum_probs=93.7

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc---CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCC------
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL---PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP------  218 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~---~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~------  218 (280)
                      +++.++++.++++++|++++++++..++...   .+++|++|||.|   .++.++++|+++|++|.+|......      
T Consensus       195 ~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~  274 (339)
T cd08232         195 ATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNA  274 (339)
T ss_pred             EECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHH
Confidence            3445667777788888888888876543221   246999999987   3789999999999999998543111      


Q ss_pred             ----ceEEE-EeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          219 ----GFRFV-VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       219 ----~~~~~-~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                          .+.+. .....+.++++++++++|.+++....++.|+++++.+|++.+..++..||+|+++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         275 LVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             HhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence                01111 1124567899999999999875432224899999999999999888889999863

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=99.56  E-value=2e-13  Score=126.10  Aligned_cols=127  Identities=17%  Similarity=0.217  Sum_probs=86.2

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCC--cccc-----CCCccEEEeCCC---CHHHHHhcc-ccCCEEEEEcCCCCCCc
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDN--FEDL-----PEKFDVVYDAIG---QCDRAVKAI-KEGGTVVALTGAVTPPG  219 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~--~~~~-----~~g~DvV~d~~g---~~~~~l~~l-~~gG~vV~~g~~~~~~~  219 (280)
                      +++.+++++++++++|+++++++.+.+  +...     .+++|+++||+|   .+..++..+ +++|+++.+|.......
T Consensus       220 ~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~  299 (373)
T cd08299         220 AVDINKDKFAKAKELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQN  299 (373)
T ss_pred             EEcCCHHHHHHHHHcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCce
Confidence            344678889999999999999876533  2221     257999999998   356767765 57999999986542111


Q ss_pred             eE-----------EE---Ee--ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          220 FR-----------FV---VT--SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       220 ~~-----------~~---~~--~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      +.           +.   ..  .....+.++.+.+.++.++.....++.|+++++.+|++.+++++. .|+|+++
T Consensus       300 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         300 LSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             eecCHHHHhcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            11           10   11  123567777777777766543223468999999999999987765 5777753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.55  E-value=4.8e-13  Score=122.95  Aligned_cols=126  Identities=22%  Similarity=0.232  Sum_probs=88.0

Q ss_pred             EecChhhHHHHHhCCCCEEEeCCC--CCcccc--------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCC
Q 023571          152 ATSSTRNLEFLKSLGADLAIDYTK--DNFEDL--------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP  218 (280)
Q Consensus       152 ~~~s~~~~~~l~~lga~~vid~~~--~~~~~~--------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~  218 (280)
                      +..++++.++++++|++.++++..  .++.+.        .+++|+||||+|   .+..++++|+++|+++.+|......
T Consensus       212 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~  291 (364)
T PLN02702        212 VDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEM  291 (364)
T ss_pred             ECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCC
Confidence            344566777788889888877542  333221        257999999988   4789999999999999998543211


Q ss_pred             ----------ceEE-EEeecHHHHHHHHHHHHCCCceeecCCCcccc--hhhHHHHHHHHHhCCCCeeEEEE
Q 023571          219 ----------GFRF-VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFP--FSQVVEAFSYIETNKATGKVVIH  277 (280)
Q Consensus       219 ----------~~~~-~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~--l~~v~~A~~~l~~~~~~gkvVv~  277 (280)
                                .+.+ ........++.+++++++|.+.+....++.|+  ++++++|++.+.+++..+|+||.
T Consensus       292 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        292 TVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             cccHHHHHhCccEEEEeccChHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence                      0111 11123467889999999998863211224644  48999999999998888999985

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.55  E-value=4e-15  Score=116.37  Aligned_cols=108  Identities=38%  Similarity=0.632  Sum_probs=77.8

Q ss_pred             CCCCEEEeCCCCCccccCCCccEEEeCCC--C---HHHHHhccccCCEEEEEcCC-C------CCCceEE--EE--ee--
Q 023571          165 LGADLAIDYTKDNFEDLPEKFDVVYDAIG--Q---CDRAVKAIKEGGTVVALTGA-V------TPPGFRF--VV--TS--  226 (280)
Q Consensus       165 lga~~vid~~~~~~~~~~~g~DvV~d~~g--~---~~~~l~~l~~gG~vV~~g~~-~------~~~~~~~--~~--~~--  226 (280)
                      |||+++|||+++++ ...+++|+||||+|  .   +..++++| ++|++|.++.. .      ....+.+  .+  ..  
T Consensus         1 LGAd~vidy~~~~~-~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
T PF13602_consen    1 LGADEVIDYRDTDF-AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGDLPSFARRLKGRSIRYSFLFSVDPNA   78 (127)
T ss_dssp             CT-SEEEETTCSHH-HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SHHHHHHHHHHCHHCEEECCC-H--HH
T ss_pred             CCcCEEecCCCccc-cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCcccchhhhhcccceEEEEEEecCCCc
Confidence            79999999998888 44689999999998  2   36667788 99999999851 1      0111122  21  11  


Q ss_pred             -cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 023571          227 -NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI  276 (280)
Q Consensus       227 -~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv  276 (280)
                       .++.++++.+++++|+|++.+..  +|+|+++.+|++.+++++..||+||
T Consensus        79 ~~~~~l~~l~~l~~~G~l~~~i~~--~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   79 IRAEALEELAELVAEGKLKPPIDR--VFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HHHHHHHHHHHHHHTTSS---EEE--EEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             hHHHHHHHHHHHHHCCCeEEeecc--EECHHHHHHHHHHHHhCCCCCeEeC
Confidence             34669999999999999999986  8999999999999999999999997

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.53  E-value=3.8e-13  Score=122.49  Aligned_cols=126  Identities=29%  Similarity=0.317  Sum_probs=91.9

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCc---cc----c--CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNF---ED----L--PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP  218 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~---~~----~--~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~  218 (280)
                      +++.++++.++++++|++.++++++.++   .+    .  .+++|++|||.|   .+..++++++++|+++.+|......
T Consensus       192 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~  271 (343)
T cd05285         192 VTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEV  271 (343)
T ss_pred             EECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCC
Confidence            3445677888888899999999887664   22    1  256999999988   4688999999999999997543211


Q ss_pred             c----------eEE-EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCC-CCeeEEE
Q 023571          219 G----------FRF-VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK-ATGKVVI  276 (280)
Q Consensus       219 ~----------~~~-~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~-~~gkvVv  276 (280)
                      .          +.+ ......+.+++++++++++.++.....++.|+++++.+|++.+.+++ ..+|++|
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         272 TLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             ccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            1          111 11123477889999999998753221224799999999999999885 4589987

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.51  E-value=1.7e-12  Score=115.99  Aligned_cols=185  Identities=42%  Similarity=0.687  Sum_probs=128.9

Q ss_pred             EcccCCCccE--EEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCC-CCCCCcccCceE---------------
Q 023571           89 YGEYGGVDVL--KFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT-DSPLPTVPGYDV---------------  150 (280)
Q Consensus        89 ~~~~g~~~~l--~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~-~~~~P~i~G~e~---------------  150 (280)
                      +...++++++  ++. +.+.|.++++||+|++.++++|+.|++...|.++.. ....|..+|+|+               
T Consensus         3 ~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~   81 (319)
T cd08267           3 YTRYGSPEVLLLLEV-EVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFK   81 (319)
T ss_pred             eCCCCChhhhhhccc-cCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCC
Confidence            4455555444  778 889999999999999999999999999887754200 011122333333               


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        82 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~  161 (319)
T cd08267          82 VGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAV  161 (319)
T ss_pred             CCCEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHH
Confidence                                                                                            


Q ss_pred             ----------EEecChhhHHHHHhCCCCEEEeCCCCCcc---ccCCCccEEEeCCCC----HHHHHhccccCCEEEEEcC
Q 023571          151 ----------AATSSTRNLEFLKSLGADLAIDYTKDNFE---DLPEKFDVVYDAIGQ----CDRAVKAIKEGGTVVALTG  213 (280)
Q Consensus       151 ----------~~~~s~~~~~~l~~lga~~vid~~~~~~~---~~~~g~DvV~d~~g~----~~~~l~~l~~gG~vV~~g~  213 (280)
                                +++.+.++.++++++|++.++++...++.   ...+++|+++||+|.    ....+..++++|+++.+|.
T Consensus       162 ~la~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~  241 (319)
T cd08267         162 QIAKALGAHVTGVCSTRNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGG  241 (319)
T ss_pred             HHHHHcCCEEEEEeCHHHHHHHHHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEecc
Confidence                      22224477788888898888887765542   123679999999882    2334444999999999986


Q ss_pred             CCCCCc----------------eE-EEEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 023571          214 AVTPPG----------------FR-FVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI  276 (280)
Q Consensus       214 ~~~~~~----------------~~-~~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv  276 (280)
                      ......                +. .......+.+.+++++++++.+++...  +.|+++++.+|++.+.+++..+|+|+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         242 GPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPVID--SVYPLEDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             ccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCeeeeee--eEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence            531100                00 011223688999999999999987644  58999999999999999887788874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.50  E-value=1.5e-12  Score=118.86  Aligned_cols=123  Identities=33%  Similarity=0.551  Sum_probs=88.5

Q ss_pred             cChhhHHHHHhCCCCEEEeCCCCC---cc-c---c---CCCccEEEeCCC---CHHHHHhccc---cCCEEEEEcCCCC-
Q 023571          154 SSTRNLEFLKSLGADLAIDYTKDN---FE-D---L---PEKFDVVYDAIG---QCDRAVKAIK---EGGTVVALTGAVT-  216 (280)
Q Consensus       154 ~s~~~~~~l~~lga~~vid~~~~~---~~-~---~---~~g~DvV~d~~g---~~~~~l~~l~---~gG~vV~~g~~~~-  216 (280)
                      .++++.++++++|+++++++++.+   +. +   .   .+++|++|||+|   .+..++++++   ++|++|.+++... 
T Consensus       185 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~  264 (352)
T cd08247         185 CSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKA  264 (352)
T ss_pred             eChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcc
Confidence            345555677778888888877655   22 1   1   368999999988   3578899999   9999998753220 


Q ss_pred             ---C-------------Cce---------EEE---EeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhC
Q 023571          217 ---P-------------PGF---------RFV---VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETN  268 (280)
Q Consensus       217 ---~-------------~~~---------~~~---~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~  268 (280)
                         .             ..+         .+.   .....+.++++++++++|.+++...  +.++++++++|++.++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~l~~~~~a~~~~~~~  342 (352)
T cd08247         265 NYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVKPPID--SVYPFEDYKEAFERLKSN  342 (352)
T ss_pred             cccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeEeeec--cEecHHHHHHHHHHHHcC
Confidence               0             000         000   1112367888999999999987644  489999999999999999


Q ss_pred             CCCeeEEEEe
Q 023571          269 KATGKVVIHP  278 (280)
Q Consensus       269 ~~~gkvVv~~  278 (280)
                      +..||+|+++
T Consensus       343 ~~~gkvvi~~  352 (352)
T cd08247         343 RAKGKVVIKV  352 (352)
T ss_pred             CCCCcEEEeC
Confidence            8889999864

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=99.50  E-value=8.6e-13  Score=118.99  Aligned_cols=112  Identities=21%  Similarity=0.321  Sum_probs=76.5

Q ss_pred             HHHHHhCCCCEEEeCCCC--CccccCCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCC-CCceE------------
Q 023571          159 LEFLKSLGADLAIDYTKD--NFEDLPEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVT-PPGFR------------  221 (280)
Q Consensus       159 ~~~l~~lga~~vid~~~~--~~~~~~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~-~~~~~------------  221 (280)
                      .++++++|+++++++++.  .+....+++|+|+||+|  .+..++++|+++|++|.+|.... ...+.            
T Consensus       196 ~~~~~~~g~~~~~~~~~~~~~l~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~  275 (325)
T cd08264         196 KDWLKEFGADEVVDYDEVEEKVKEITKMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISII  275 (325)
T ss_pred             HHHHHHhCCCeeecchHHHHHHHHHhCCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEE
Confidence            355666777777776531  11111267999999998  68899999999999999986421 11111            


Q ss_pred             EEEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeE
Q 023571          222 FVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKV  274 (280)
Q Consensus       222 ~~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkv  274 (280)
                      ......++.+++++++++.+.+  .+.  +.|+++++.+|++.+.+++..+|+
T Consensus       276 ~~~~~~~~~~~~~~~l~~~~~~--~~~--~~~~~~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         276 GSTGGTRKELLELVKIAKDLKV--KVW--KTFKLEEAKEALKELFSKERDGRI  324 (325)
T ss_pred             EccCCCHHHHHHHHHHHHcCCc--eeE--EEEcHHHHHHHHHHHHcCCCcccc
Confidence            0111124688889999965442  233  489999999999999988776765

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08251 polyketide_synthase polyketide synthase

Probab=99.49  E-value=8.4e-13  Score=116.92  Aligned_cols=168  Identities=29%  Similarity=0.505  Sum_probs=127.2

Q ss_pred             CCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-----------------------------------
Q 023571          106 VPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-----------------------------------  150 (280)
Q Consensus       106 ~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-----------------------------------  150 (280)
                      .|.+.+++|+|++.++++|+.|++.+.|.++. ...+|.++|+|+                                   
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~   80 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT-MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLV   80 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC-CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEE
Confidence            57889999999999999999999999887642 234566666666                                   


Q ss_pred             ---------------------------------------------------------------------EEecChhhHHH
Q 023571          151 ---------------------------------------------------------------------AATSSTRNLEF  161 (280)
Q Consensus       151 ---------------------------------------------------------------------~~~~s~~~~~~  161 (280)
                                                                                           +++.++++.++
T Consensus        81 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  160 (303)
T cd08251          81 TVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEY  160 (303)
T ss_pred             EccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence                                                                                 44556778888


Q ss_pred             HHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCCC--C---------ceEE
Q 023571          162 LKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVTP--P---------GFRF  222 (280)
Q Consensus       162 l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~~--~---------~~~~  222 (280)
                      ++++|++.++++...++...      .+++|+++||++  .+..++++++++|+++.+|.....  .         ...+
T Consensus       161 ~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~  240 (303)
T cd08251         161 LKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSVLSNNQSF  240 (303)
T ss_pred             HHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChhHhhcCceE
Confidence            88899999998877654432      257999999987  578899999999999998754311  0         1111


Q ss_pred             -EEe----------ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 023571          223 -VVT----------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI  276 (280)
Q Consensus       223 -~~~----------~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv  276 (280)
                       ...          ...+.+.++.+++++|.+++...  +.|+++++.++++.+.+++..||+|+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         241 HSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVS--RIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             EEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCc--eEEcHHHHHHHHHHHHhCCCcceEeC
Confidence             111          01245788899999999886543  58999999999999999988888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.49  E-value=1.8e-12  Score=120.09  Aligned_cols=124  Identities=23%  Similarity=0.256  Sum_probs=87.8

Q ss_pred             EecChhhHHHHHhCCCCEEEeCCCC---Ccccc------CCCccEEEeCCC----CHHHHHhccccCCEEEEEcCCCCCC
Q 023571          152 ATSSTRNLEFLKSLGADLAIDYTKD---NFEDL------PEKFDVVYDAIG----QCDRAVKAIKEGGTVVALTGAVTPP  218 (280)
Q Consensus       152 ~~~s~~~~~~l~~lga~~vid~~~~---~~~~~------~~g~DvV~d~~g----~~~~~l~~l~~gG~vV~~g~~~~~~  218 (280)
                      ++.++++.+.++++|+++++++++.   ++.+.      .+++|+|+||+|    .+..++++|+++|+++.+|......
T Consensus       234 ~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~  313 (384)
T cd08265         234 FEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTV  313 (384)
T ss_pred             EcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCC
Confidence            3345667777788888888887743   33322      257999999988    2578899999999999998653211


Q ss_pred             ce----------EEEE---eecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 023571          219 GF----------RFVV---TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI  276 (280)
Q Consensus       219 ~~----------~~~~---~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv  276 (280)
                      .+          .+..   ......++++++++++|.+++....++.|+++++.+|++.+.++ ..||+|+
T Consensus       314 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         314 PLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             cccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            11          1110   12345789999999999998643233589999999999997665 5688875

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.36  E-value=1.4e-11  Score=107.26  Aligned_cols=127  Identities=21%  Similarity=0.396  Sum_probs=102.8

Q ss_pred             EEecChhhHHHHHh-CCCCEEEeCCCC-Ccccc-----CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCC-----C
Q 023571          151 AATSSTRNLEFLKS-LGADLAIDYTKD-NFEDL-----PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAV-----T  216 (280)
Q Consensus       151 ~~~~s~~~~~~l~~-lga~~vid~~~~-~~~~~-----~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~-----~  216 (280)
                      ..+.+.+|.+++++ +|-|..|||+++ +..++     .+|+|+.||.+|  .++..+..|+..||++.+|...     .
T Consensus       183 GsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~~~  262 (343)
T KOG1196|consen  183 GSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNLEN  262 (343)
T ss_pred             EecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccccC
Confidence            56678899999976 899999999998 44443     279999999999  5899999999999999999765     1


Q ss_pred             CCceE--------------EE----EeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          217 PPGFR--------------FV----VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       217 ~~~~~--------------~~----~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      +..+.              |.    .....+.++.+.+++++|+|+-..+.  .-+|+...+||.-|.+|+..||.++.+
T Consensus       263 ~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKqiv~v  340 (343)
T KOG1196|consen  263 PEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQLVKV  340 (343)
T ss_pred             CccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccceEEEe
Confidence            11110              01    11234778999999999999988875  678999999999999999999999987


Q ss_pred             C
Q 023571          279 I  279 (280)
Q Consensus       279 ~  279 (280)
                      .
T Consensus       341 a  341 (343)
T KOG1196|consen  341 A  341 (343)
T ss_pred             e
Confidence            4

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.34  E-value=7.2e-12  Score=124.19  Aligned_cols=183  Identities=22%  Similarity=0.348  Sum_probs=142.7

Q ss_pred             CCCccEEEeeeccCC---CCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCC-------cccCceE------------
Q 023571           93 GGVDVLKFDEKVTVP---QVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP-------TVPGYDV------------  150 (280)
Q Consensus        93 g~~~~l~l~~~~~~p---~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P-------~i~G~e~------------  150 (280)
                      |+...++|. +.|..   +..++.=+.-|.|+.||..|+.+..|+.++  ..+|       ..+|.|+            
T Consensus      1424 GDlsSlrWi-es~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~--DAiPG~~a~qdclLGmEFsGRd~~GrRvM~ 1500 (2376)
T KOG1202|consen 1424 GDLSSLRWI-ESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSP--DAIPGDLASQDCLLGMEFSGRDASGRRVMG 1500 (2376)
T ss_pred             ccccceeee-ecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCc--ccCCCccchhhheeceeeccccCCCcEEEE
Confidence            455668888 77654   347788899999999999999999999863  3333       5678888            


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus      1501 mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~V 1580 (2376)
T KOG1202|consen 1501 MVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTV 1580 (2376)
T ss_pred             eeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEE
Confidence                                                                                            


Q ss_pred             -EEecChhhHHHHHh----CCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCC-
Q 023571          151 -AATSSTRNLEFLKS----LGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVT-  216 (280)
Q Consensus       151 -~~~~s~~~~~~l~~----lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~-  216 (280)
                       .++.|.+|+++|..    +....+-|+++.+|+..      ++|+|+|++...  -++.+++||+.+||+..+|-... 
T Consensus      1581 FTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDLS 1660 (2376)
T KOG1202|consen 1581 FTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDLS 1660 (2376)
T ss_pred             EEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceecc
Confidence             68899999999965    56788889999888764      479999999987  68999999999999999987652 


Q ss_pred             ---CCce-------EE-------EEeecHHHHHHHHHHHHC----CCceeecCCCcccchhhHHHHHHHHHhCCCCeeEE
Q 023571          217 ---PPGF-------RF-------VVTSNGEVLKKLNPYLES----GKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVV  275 (280)
Q Consensus       217 ---~~~~-------~~-------~~~~~~~~l~~l~~ll~~----G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvV  275 (280)
                         +.++       .|       .+...-+.+.++.+++++    |.++|...  ++|+-.++++||++|.+|+..||+|
T Consensus      1661 qNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~t--tvF~~~qvE~AFRfMasGKHIGKVv 1738 (2376)
T KOG1202|consen 1661 QNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPT--TVFHGQQVEDAFRFMASGKHIGKVV 1738 (2376)
T ss_pred             cCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceecccc--ccccHHHHHHHHHHHhccCccceEE
Confidence               1111       11       223344667777777665    56777666  4999999999999999999999999


Q ss_pred             EEeCC
Q 023571          276 IHPIP  280 (280)
Q Consensus       276 v~~~~  280 (280)
                      +++.+
T Consensus      1739 ikvr~ 1743 (2376)
T KOG1202|consen 1739 IKVRA 1743 (2376)
T ss_pred             EEEcc
Confidence            99863

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.33  E-value=2.7e-11  Score=106.11  Aligned_cols=124  Identities=26%  Similarity=0.370  Sum_probs=90.1

Q ss_pred             EEecChhhHHHHHhCC--CCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCCC---
Q 023571          151 AATSSTRNLEFLKSLG--ADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVTP---  217 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lg--a~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~~---  217 (280)
                      +++.++++.++++.+|  ++.++++...++.+.      .+++|+++||+|  .+..++++++++|+++.+|.....   
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~  217 (293)
T cd05195         138 ATVGSEEKREFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNS  217 (293)
T ss_pred             EEeCCHHHHHHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCC
Confidence            4445667778888877  678888766544332      257999999998  588999999999999999765421   


Q ss_pred             -Cc-------eEEEE-e----------ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 023571          218 -PG-------FRFVV-T----------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI  276 (280)
Q Consensus       218 -~~-------~~~~~-~----------~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv  276 (280)
                       ..       ..+.. .          ...+.+.++.+++++|.+++...  +.+.++++.++++.+..++..+|+|+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         218 KLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPP--TVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             ccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCC--eeechhhHHHHHHHHhcCCCCceecC
Confidence             00       11110 0          01346788899999999886554  47899999999999999888888874

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.29  E-value=1.2e-10  Score=104.64  Aligned_cols=50  Identities=30%  Similarity=0.361  Sum_probs=42.6

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCC
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF  135 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~  135 (280)
                      ||+++..+. .+..++++ +.+.|.+.++||+|+|.++++|+.|++...|.+
T Consensus         1 ~~~~~~~~~-~~~~~~~~-~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~   50 (306)
T cd08258           1 MKALVKTGP-GPGNVELR-EVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDY   50 (306)
T ss_pred             CeeEEEecC-CCCceEEe-ecCCCCCCCCeEEEEEEEEEechhhHHHHcCCC
Confidence            688888663 33558999 999999999999999999999999999887754

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>smart00829 PKS_ER Enoylreductase

Probab=99.16  E-value=6.3e-10  Score=97.37  Aligned_cols=124  Identities=27%  Similarity=0.451  Sum_probs=90.6

Q ss_pred             EEecChhhHHHHHhCCC--CEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCC----
Q 023571          151 AATSSTRNLEFLKSLGA--DLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVT----  216 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga--~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~----  216 (280)
                      +++.++++.++++++|+  +.++++...++.+.      .+++|+++|++|  .+..++++++++|+++.+|....    
T Consensus       134 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~  213 (288)
T smart00829      134 ATAGSPEKRDFLRELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNS  213 (288)
T ss_pred             EEeCCHHHHHHHHHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCcccc
Confidence            44557788888888998  78888877665432      147999999988  57889999999999999986431    


Q ss_pred             CCc-------eEEEE-e---------ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 023571          217 PPG-------FRFVV-T---------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI  276 (280)
Q Consensus       217 ~~~-------~~~~~-~---------~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv  276 (280)
                      ...       ..+.. .         ...+.+.++.+++++|.+++...  +.|+++++.++++.+..++..+|+|+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      214 QLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPV--TVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             ccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCc--eEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            100       11100 0         01245778888999998876433  58999999999999999887788764

Enoylreductase in Polyketide synthases.

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=98.93  E-value=3.4e-09  Score=82.89  Aligned_cols=69  Identities=38%  Similarity=0.580  Sum_probs=60.4

Q ss_pred             CceE-EEecChhhHHHHHhCCCCEEEeCCCCCccccC------CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCC
Q 023571          147 GYDV-AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       147 G~e~-~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      |..+ +++.+++|+++++++|+++++++++.++.+.+      +++|+||||+|   .++.++++++++|+++.+|...
T Consensus        14 G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~vg~~~   92 (130)
T PF00107_consen   14 GAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLLRPGGRIVVVGVYG   92 (130)
T ss_dssp             TSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHEEEEEEEEEESSTS
T ss_pred             CCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHhccCCEEEEEEccC
Confidence            4444 67788889999999999999999998876643      47999999999   4899999999999999999987

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=98.57  E-value=1.1e-06  Score=76.44  Aligned_cols=66  Identities=35%  Similarity=0.588  Sum_probs=52.1

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEEeCCCC---HHHHHhccccCCEEEEEcCCCC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVT  216 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g~---~~~~l~~l~~gG~vV~~g~~~~  216 (280)
                      +++.++++.++++++|++.++++.+.++...     .+++|++||++|.   +..++++++++|+++.++....
T Consensus       163 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~  236 (271)
T cd05188         163 VTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSG  236 (271)
T ss_pred             EEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCC
Confidence            4556667788888888888888877655432     3689999999873   6789999999999999987653

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=98.46  E-value=1.7e-06  Score=76.16  Aligned_cols=122  Identities=23%  Similarity=0.303  Sum_probs=86.9

Q ss_pred             EEecChhhHHHHHhCC-CCEEEeCCCCCccccCCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCC---------
Q 023571          151 AATSSTRNLEFLKSLG-ADLAIDYTKDNFEDLPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTP---------  217 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lg-a~~vid~~~~~~~~~~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~---------  217 (280)
                      +++.++++.++++++| ++.++++.....  ..+++|++|||+|   .+..++++++++|+++.+|.....         
T Consensus       127 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~  204 (277)
T cd08255         127 GVDPDAARRELAEALGPADPVAADTADEI--GGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFH  204 (277)
T ss_pred             EECCCHHHHHHHHHcCCCccccccchhhh--cCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHH
Confidence            5566788889889999 666665543111  2357999999977   478999999999999999865321         


Q ss_pred             -CceEEE---Ee-----------ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhC-CCCeeEEE
Q 023571          218 -PGFRFV---VT-----------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETN-KATGKVVI  276 (280)
Q Consensus       218 -~~~~~~---~~-----------~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~-~~~gkvVv  276 (280)
                       ....+.   +.           ...+.++++++++++|.+++...  +.|+++++.+|++.++.+ ....|+++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~--~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         205 FKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALIT--HRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             hccCeEEeecccccccccccccccccccHHHHHHHHHcCCcccccc--CccCHHHHHHHHHHHHcCCccceeeeC
Confidence             000110   00           01257899999999999887644  489999999999999887 34467653

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=98.45  E-value=5.5e-07  Score=79.86  Aligned_cols=108  Identities=20%  Similarity=0.194  Sum_probs=75.0

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCc--cc--cCCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCC--CCCceE
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNF--ED--LPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAV--TPPGFR  221 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~--~~--~~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~--~~~~~~  221 (280)
                      +++.+++|+++++++|++.++++.+...  .+  ..+++|++|||+|   .++.++++++++|+++.+|...  .+..++
T Consensus       150 ~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~  229 (280)
T TIGR03366       150 AADPSPDRRELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALD  229 (280)
T ss_pred             EECCCHHHHHHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeC
Confidence            4456788999999999999998754211  11  1257999999998   4789999999999999999643  111111


Q ss_pred             ------------EEEeecHHHHHHHHHHHHCC--CceeecCCCcccchhhH
Q 023571          222 ------------FVVTSNGEVLKKLNPYLESG--KVKPIIDPKGPFPFSQV  258 (280)
Q Consensus       222 ------------~~~~~~~~~l~~l~~ll~~G--~l~~~~~~~~~~~l~~v  258 (280)
                                  .......+++++++++++++  +++.....++.|+|+|+
T Consensus       230 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       230 PEQVVRRWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             HHHHHhCCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence                        11122357889999999874  45443344578888864

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=98.23  E-value=1.8e-06  Score=65.57  Aligned_cols=39  Identities=28%  Similarity=0.328  Sum_probs=32.5

Q ss_pred             CCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE
Q 023571          111 EDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV  150 (280)
Q Consensus       111 ~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~  150 (280)
                      ||||||||.++|||++|++.+.|... ....+|.++|||+
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~-~~~~~p~i~GhE~   39 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPP-PPPKFPLILGHEG   39 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSS-STSSSSEES-SEE
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccc-cCCCCCcccccce
Confidence            68999999999999999999999522 3568899999999

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=97.64  E-value=0.00022  Score=66.65  Aligned_cols=122  Identities=13%  Similarity=0.121  Sum_probs=81.2

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCccccCCCccEEEeCCC---CHHHH-HhccccCCEEEEEcCCCCCCceE-----
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG---QCDRA-VKAIKEGGTVVALTGAVTPPGFR-----  221 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~~g~DvV~d~~g---~~~~~-l~~l~~gG~vV~~g~~~~~~~~~-----  221 (280)
                      ++..++.+++.++.+|++.+ +     ..+..+++|+||+|+|   .+... ++++++||+++.+|......+..     
T Consensus       230 V~d~d~~R~~~A~~~G~~~~-~-----~~e~v~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~~~eId~~~L~~~  303 (413)
T cd00401         230 VTEVDPICALQAAMEGYEVM-T-----MEEAVKEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHFDVEIDVKGLKEN  303 (413)
T ss_pred             EEECChhhHHHHHhcCCEEc-c-----HHHHHcCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCCCCccCHHHHHhh
Confidence            44556777788888887433 2     1234468999999999   36665 99999999999999654221111     


Q ss_pred             ---E--EEeecHH-HHH--HHHHHHHCCCc-eeecCCCcc-----cchh-hHHHHHHHHHhCCCC-eeEEEEe
Q 023571          222 ---F--VVTSNGE-VLK--KLNPYLESGKV-KPIIDPKGP-----FPFS-QVVEAFSYIETNKAT-GKVVIHP  278 (280)
Q Consensus       222 ---~--~~~~~~~-~l~--~l~~ll~~G~l-~~~~~~~~~-----~~l~-~v~~A~~~l~~~~~~-gkvVv~~  278 (280)
                         .  ......+ .+.  +.+.++++|++ ......+|+     ++|+ |+.+++..+.+++.. -|+++.+
T Consensus       304 el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p  376 (413)
T cd00401         304 AVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP  376 (413)
T ss_pred             ccEEEEccCCcceEEcCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence               1  1111112 344  68999999988 544444467     8999 999999999887542 4565543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.38  E-value=0.01  Score=56.99  Aligned_cols=97  Identities=16%  Similarity=0.256  Sum_probs=65.3

Q ss_pred             EEecChhhHHHHHhCCCCEE-EeCCCCC-------------c--------cccCCCccEEEeCCCC---------HHHHH
Q 023571          151 AATSSTRNLEFLKSLGADLA-IDYTKDN-------------F--------EDLPEKFDVVYDAIGQ---------CDRAV  199 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~v-id~~~~~-------------~--------~~~~~g~DvV~d~~g~---------~~~~l  199 (280)
                      +.+.++++++.++++|++.+ +|..+++             +        .+..+++|+||+|+|.         .++++
T Consensus       193 a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v  272 (509)
T PRK09424        193 AFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMV  272 (509)
T ss_pred             EEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHH
Confidence            67888999999999999954 6654321             1        1112579999999982         48999


Q ss_pred             hccccCCEEEEEcCCC-CC--Cce---EEEE---------eec-HHHHHHHHHHHHCCCceeec
Q 023571          200 KAIKEGGTVVALTGAV-TP--PGF---RFVV---------TSN-GEVLKKLNPYLESGKVKPII  247 (280)
Q Consensus       200 ~~l~~gG~vV~~g~~~-~~--~~~---~~~~---------~~~-~~~l~~l~~ll~~G~l~~~~  247 (280)
                      +.+++||++|.++... ..  ...   .+..         ... .+....+.+++.++.++...
T Consensus       273 ~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p~~As~lla~~~i~l~~  336 (509)
T PRK09424        273 ASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLPTQSSQLYGTNLVNLLK  336 (509)
T ss_pred             HhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHHHHHHHHHHhCCccHHH
Confidence            9999999999998742 11  111   1111         111 24444688899998876543

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=93.06  E-value=0.47  Score=41.71  Aligned_cols=124  Identities=14%  Similarity=0.173  Sum_probs=68.2

Q ss_pred             EEecChhhHHHHHh----CCCCEEEeCCCCCcccc---CCCccEEEeCC-C--------CHHHHHhccccCCEEEEEcCC
Q 023571          151 AATSSTRNLEFLKS----LGADLAIDYTKDNFEDL---PEKFDVVYDAI-G--------QCDRAVKAIKEGGTVVALTGA  214 (280)
Q Consensus       151 ~~~~s~~~~~~l~~----lga~~vid~~~~~~~~~---~~g~DvV~d~~-g--------~~~~~l~~l~~gG~vV~~g~~  214 (280)
                      +++.+++.++.+++    +|.+.+ .....++.+.   .+.+|+|+... .        .++.+.++|++||+++..+..
T Consensus       107 gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~d~~~l~~~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~  185 (272)
T PRK11873        107 GVDMTPEMLAKARANARKAGYTNV-EFRLGEIEALPVADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVV  185 (272)
T ss_pred             EECCCHHHHHHHHHHHHHcCCCCE-EEEEcchhhCCCCCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEee
Confidence            56677888887765    343322 1111222221   24799998543 1        378999999999999987544


Q ss_pred             CCCC---ce----EEEE--eecHHHHHHHHHHHHC-CCceeecCCCcccchhhHHHHHHHH--HhCCCCeeEE
Q 023571          215 VTPP---GF----RFVV--TSNGEVLKKLNPYLES-GKVKPIIDPKGPFPFSQVVEAFSYI--ETNKATGKVV  275 (280)
Q Consensus       215 ~~~~---~~----~~~~--~~~~~~l~~l~~ll~~-G~l~~~~~~~~~~~l~~v~~A~~~l--~~~~~~gkvV  275 (280)
                      ....   .+    .+..  .......+++.+++++ |-....+.....+.++++.++++.+  ..++..++.+
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  258 (272)
T PRK11873        186 LRGELPEEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYI  258 (272)
T ss_pred             ccCCCCHHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceE
Confidence            3211   00    0000  0001123456666665 4333223222468899999999988  5555444444

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=91.42  E-value=2.1  Score=35.68  Aligned_cols=111  Identities=20%  Similarity=0.157  Sum_probs=67.6

Q ss_pred             CCCCCcEEEEEEEEe-cChHHHHHHcCCCCCCCCCCCcccCceEEEecChhhHHHHHh----CCCCE--EEeCCCCCccc
Q 023571          108 QVKEDQVLIKVVAAA-LNPVDGKRRQGKFKATDSPLPTVPGYDVAATSSTRNLEFLKS----LGADL--AIDYTKDNFED  180 (280)
Q Consensus       108 ~~~~~eVlVkV~aag-l~~~D~~~~~g~~~~~~~~~P~i~G~e~~~~~s~~~~~~l~~----lga~~--vid~~~~~~~~  180 (280)
                      .|.+|++++.|-+.+ -=..+|. +.+..           |+=++...+++..+..++    +|.+.  ++....+..-.
T Consensus        31 ~~~~g~~l~DIGaGtGsi~iE~a-~~~p~-----------~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~   98 (187)
T COG2242          31 RPRPGDRLWDIGAGTGSITIEWA-LAGPS-----------GRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALP   98 (187)
T ss_pred             CCCCCCEEEEeCCCccHHHHHHH-HhCCC-----------ceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhc
Confidence            577899999986543 2223343 22211           222366777777776644    78774  44443333322


Q ss_pred             cCCCccEEEeCCC-C----HHHHHhccccCCEEEEEcCCCCCCceEEEEeecHHHHHHHHHHHHCCCc
Q 023571          181 LPEKFDVVYDAIG-Q----CDRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKV  243 (280)
Q Consensus       181 ~~~g~DvV~d~~g-~----~~~~l~~l~~gG~vV~~g~~~~~~~~~~~~~~~~~~l~~l~~ll~~G~l  243 (280)
                      ....+|.+|-.-| .    ++.++..|++||++|.-..             .-+-+..+++++++-..
T Consensus        99 ~~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~nai-------------tlE~~~~a~~~~~~~g~  153 (187)
T COG2242          99 DLPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANAI-------------TLETLAKALEALEQLGG  153 (187)
T ss_pred             CCCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEee-------------cHHHHHHHHHHHHHcCC
Confidence            2347999997655 2    7899999999999996432             23556666666665444

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=89.28  E-value=0.92  Score=43.80  Aligned_cols=65  Identities=22%  Similarity=0.466  Sum_probs=47.2

Q ss_pred             EEecChhhHHHHHhCCCCEE-EeCCCC-------------C--------ccccCCCccEEEeCC---C--C----HHHHH
Q 023571          151 AATSSTRNLEFLKSLGADLA-IDYTKD-------------N--------FEDLPEKFDVVYDAI---G--Q----CDRAV  199 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~v-id~~~~-------------~--------~~~~~~g~DvV~d~~---g--~----~~~~l  199 (280)
                      +.+.++++++.++++|++.+ ++..+.             +        +.+..+++|+||+|+   |  .    .++.+
T Consensus       192 v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv  271 (511)
T TIGR00561       192 AFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMV  271 (511)
T ss_pred             EEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHH
Confidence            56788889999999998763 332110             1        112246899999998   5  1    47889


Q ss_pred             hccccCCEEEEEcCCC
Q 023571          200 KAIKEGGTVVALTGAV  215 (280)
Q Consensus       200 ~~l~~gG~vV~~g~~~  215 (280)
                      +.+++|+.+|+++...
T Consensus       272 ~~MKpGsvIVDlA~d~  287 (511)
T TIGR00561       272 DSMKAGSVIVDLAAEQ  287 (511)
T ss_pred             hhCCCCCEEEEeeeCC
Confidence            9999999999996654

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B

Probab=87.72  E-value=0.53  Score=25.16  Aligned_cols=22  Identities=27%  Similarity=0.484  Sum_probs=13.6

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCC
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQV  109 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~  109 (280)
                      |||++|.+.++   ++++ ++|.|.+
T Consensus         1 MkAv~y~G~~~---v~ve-~VpdP~I   22 (23)
T PF13823_consen    1 MKAVVYHGPKD---VRVE-EVPDPKI   22 (23)
T ss_dssp             -EEEEEEETTE---EEEE-EE----S
T ss_pred             CcceEEeCCCc---eEEE-ECCCccc
Confidence            89999987654   7888 8887764

>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]

Probab=82.31  E-value=17  Score=33.48  Aligned_cols=98  Identities=26%  Similarity=0.305  Sum_probs=59.6

Q ss_pred             CCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCce-EEEecChhhHHHHH----hCCCCE--EEeCCCCCccc
Q 023571          108 QVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYD-VAATSSTRNLEFLK----SLGADL--AIDYTKDNFED  180 (280)
Q Consensus       108 ~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e-~~~~~s~~~~~~l~----~lga~~--vid~~~~~~~~  180 (280)
                      .|.+|+.++.+.|+.=..+-........          .|.- ++.+.++.++..++    .+|...  ++..++..+..
T Consensus       153 ~p~pge~VlD~cAAPGGKTthla~~~~~----------~~~iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~~~~  222 (355)
T COG0144         153 DPKPGERVLDLCAAPGGKTTHLAELMEN----------EGAIVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAE  222 (355)
T ss_pred             CCCCcCEEEEECCCCCCHHHHHHHhcCC----------CCceEEEEcCCHHHHHHHHHHHHHcCCCceEEEecccccccc
Confidence            5778888888877765544332221111          1222 37777888877664    489874  44444433333


Q ss_pred             cC---CCccEEE-e--CCC-C---------------------------HHHHHhccccCCEEEEEcCCC
Q 023571          181 LP---EKFDVVY-D--AIG-Q---------------------------CDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       181 ~~---~g~DvV~-d--~~g-~---------------------------~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      ..   ..||.|+ |  |+| +                           +..+++.|++||++|.....-
T Consensus       223 ~~~~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~GG~LVYSTCS~  291 (355)
T COG0144         223 LLPGGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPGGVLVYSTCSL  291 (355)
T ss_pred             cccccCcCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEccCC
Confidence            22   2488775 4  555 1                           478889999999999876544

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=81.76  E-value=4.2  Score=36.44  Aligned_cols=65  Identities=9%  Similarity=0.227  Sum_probs=45.2

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCccccCCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP  218 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~  218 (280)
                      +...++++.+.++++|+..+ .+  +++.+...++|+||+|++   .-+..++.+++++.+|+++..+...
T Consensus       180 v~~r~~~~~~~~~~~G~~~~-~~--~~l~~~l~~aDiVI~t~p~~~i~~~~l~~~~~g~vIIDla~~pggt  247 (296)
T PRK08306        180 VGARKSAHLARITEMGLSPF-HL--SELAEEVGKIDIIFNTIPALVLTKEVLSKMPPEALIIDLASKPGGT  247 (296)
T ss_pred             EEECCHHHHHHHHHcCCeee-cH--HHHHHHhCCCCEEEECCChhhhhHHHHHcCCCCcEEEEEccCCCCc
Confidence            45556666677777776532 22  233344578999999987   2367788899999999998877543

>PLN02494 adenosylhomocysteinase

Probab=80.67  E-value=2.7  Score=40.14  Aligned_cols=34  Identities=12%  Similarity=0.156  Sum_probs=29.1

Q ss_pred             CCCccEEEeCCC--C--HHHHHhccccCCEEEEEcCCC
Q 023571          182 PEKFDVVYDAIG--Q--CDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       182 ~~g~DvV~d~~g--~--~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      .+..|+|+.|+|  .  ....++.+++||.++.+|...
T Consensus       307 l~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~  344 (477)
T PLN02494        307 VSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD  344 (477)
T ss_pred             HhhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence            467899999998  2  378999999999999998854

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	280
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		1e-06
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		8e-05
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		8e-05
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		8e-05
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		9e-05
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		9e-05
2vn8_A	375	Crystal Structure Of Human Reticulon 4 Interacting		2e-04
3gaz_A	343	Crystal Structure Of An Alcohol Dehydrogenase Super		2e-04

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           M+A    E+GG +VLK    + VP  K+ QVLIKV A  +NPV+   R G + +    LP
Sbjct: 30  MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTY-SRKPLLP 88
Query: 144 TVPGYDVAA 152
             PG DVA 
Sbjct: 89  YTPGSDVAG 97

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 83  EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGK---FKATD 139
           E KA  + ++G   VLK  +  T P+ +++Q LIKV AA+LNP+D K R G     K   
Sbjct: 6   EXKAIQFDQFGPPKVLKLVDTPT-PEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLK 64
Query: 140 SPLPTVPGYD 149
           + LP+  GYD
Sbjct: 65  NNLPSGLGYD 74

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 16/143 (11%)
Query: 147 GYDVAATSSTRNLEFLKSLGADLAIDYTKDNF-EDLPEKFDVVYDAIGQ--CDRAVKAIK 203
           G  V  T+S RN  FLK+LGA+  I+Y +++F   +    D V D +G     +++  +K
Sbjct: 177 GTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQSIDCLK 236
Query: 204 EGGTVVAL----TGAVTP-------PGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGP 252
           E G +V++     G V           F  +   N E L  L   +   K++  I+    
Sbjct: 237 ETGCIVSVPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLR--IEISRI 294
Query: 253 FPFSQVVEAFSYIETNKATGKVV 275
           F  S+ V A   +ET    GK+V
Sbjct: 295 FQLSEAVTAHELLETGHVRGKLV 317

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 40/168 (23%)
Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNF-----EDLPEKFDVVYDAIGQC--DRAVKAI 202
           +   SS     FLKSLG D  I+Y  +       ++ PE  DVVY+++G    D AV A+
Sbjct: 200 IGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDAL 259
Query: 203 KEGGTVVA---LTGAVTPPGFRFVVTSN--GEVLKK--------LNPYLE---------- 239
              G ++    ++G  TP G   V       ++LKK        LN YL           
Sbjct: 260 ATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLL 319
Query: 240 ----SGKVKPIID-----PKGPFP-FSQVVEAFSYIETNKATGKVVIH 277
               SG +   +D     P+G F     +  A +Y+   K TGK+V+ 
Sbjct: 320 EMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVE 367

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 40/168 (23%)
Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNF-----EDLPEKFDVVYDAIGQC--DRAVKAI 202
           +   SS     FLKSLG D  I+Y  +       ++ PE  DVVY+++G    D AV A+
Sbjct: 171 IGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDAL 230
Query: 203 KEGGTVVA---LTGAVTPPGFRFVVTSN--GEVLKK--------LNPYLE---------- 239
              G ++    ++G  TP G   V       ++LKK        LN YL           
Sbjct: 231 ATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLL 290
Query: 240 ----SGKVKPIID-----PKGPFP-FSQVVEAFSYIETNKATGKVVIH 277
               SG +   +D     P+G F     +  A +Y+   K TGK+V+ 
Sbjct: 291 EMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVE 338

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 40/168 (23%)
Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNF-----EDLPEKFDVVYDAIGQC--DRAVKAI 202
           +   SS     FLKSLG D  I+Y  +       ++ PE  DVVY+++G    D AV A+
Sbjct: 192 IGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDAL 251
Query: 203 KEGGTVVA---LTGAVTPPGFRFVVTSN--GEVLKK--------LNPYLE---------- 239
              G ++    ++G  TP G   V       ++LKK        LN YL           
Sbjct: 252 ATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLL 311
Query: 240 ----SGKVKPIID-----PKGPFP-FSQVVEAFSYIETNKATGKVVIH 277
               SG +   +D     P+G F     +  A +Y+   K TGK+V+ 
Sbjct: 312 EMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVE 359

>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein 1 In Complex With Nadph Length = 375

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 39/167 (23%)
Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEK---FDVVYDAIG------------- 193
           V A  S    E ++ LGAD  IDY   + E+  +    FD + D +G             
Sbjct: 211 VTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKK 270
Query: 194 ---------------QCDR---AVKAIKEGGTV--VALTGAVTPPGFRFVV-TSNGEVLK 232
                            DR   A   ++ G TV   AL        +R+    ++G  L 
Sbjct: 271 WSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLD 330
Query: 233 KLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI 279
            +   +++GK++P+I+    FPFS+V EAF  +E   A GK VI+ +
Sbjct: 331 DIAELVDAGKIRPVIEQT--FPFSKVPEAFLKVERGHARGKTVINVV 375

>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily Protein From Novosphingobium Aromaticivorans Length = 343

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 33/161 (20%)
Query: 147 GYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEK-----FDVVYDAIGQ--CDRAV 199
           G  V AT+   +LE+++ LGA   ID +++  +   E      FD+VYD +G    D + 
Sbjct: 175 GARVFATARGSDLEYVRDLGAT-PIDASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASF 233
Query: 200 KAIKEGGTVVALTG----AVTPPGFRFVVTSN----------------GEVLKKLNPYLE 239
            A+K  G VV+  G     + P  F+    S                 GE L++ +  ++
Sbjct: 234 SAVKRFGHVVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEXLREADALVQ 293
Query: 240 SGKVKPIIDPKGPFPFSQVVEAFSYI----ETNKATGKVVI 276
           +GK+ P +DP+  F  +++  A+  +    +  +  GK+ I
Sbjct: 294 TGKLAPRLDPR-TFSIAEIGSAYDAVLGRNDVPRQRGKIAI 333

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	280
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	7e-39
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	1e-21
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	5e-30
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	5e-15
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	9e-30
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	1e-19
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	2e-28
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-17
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	6e-27
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	7e-20
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	5e-26
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	2e-17
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	8e-24
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	9e-15
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	7e-23
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	3e-14
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	9e-22
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	4e-09
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	9e-22
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	5e-12
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	1e-21
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	3e-11
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	7e-18
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	2e-13
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	4e-17
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	3e-09
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	4e-17
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	3e-14
4eye_A	342	Probable oxidoreductase; structural genomics, niai	8e-17
4eye_A	342	Probable oxidoreductase; structural genomics, niai	6e-12
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	1e-16
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	3e-16
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	3e-16
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	8e-12
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	5e-16
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	1e-13
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	2e-15
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	4e-13
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	2e-15
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	1e-08
3gms_A	340	Putative NADPH:quinone reductase; structural genom	2e-14
3gms_A	340	Putative NADPH:quinone reductase; structural genom	3e-13
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	2e-13
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	5e-12
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	3e-13
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	9e-11
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	5e-13
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	1e-12
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	8e-11
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	6e-12
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	2e-11
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	9e-12
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	3e-11
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	1e-11
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	7e-11
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	9e-05
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	8e-10
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	3e-09
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	4e-09
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	1e-07
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	1e-07
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	2e-07
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	2e-07
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	2e-07
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	2e-07
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	5e-04
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	3e-07
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	3e-07
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	8e-07
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	6e-05
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	2e-05
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	3e-05
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	7e-05

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  137 bits (347), Expect = 7e-39
 Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 16/141 (11%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFED-LPEKFDVVYDAIGQ--CDRAVKAIKEGG 206
           V  T+S RN  FLK+LGA+  I+Y +++F   +    D V D +G     +++  +KE G
Sbjct: 180 VITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQSIDCLKETG 239

Query: 207 TVVALTGAVTPP-----------GFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPF 255
            +V++                   F  +   N E L  L   +   K++  I     F  
Sbjct: 240 CIVSVPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIEIS--RIFQL 297

Query: 256 SQVVEAFSYIETNKATGKVVI 276
           S+ V A   +ET    GK+V 
Sbjct: 298 SEAVTAHELLETGHVRGKLVF 318

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 91.5 bits (228), Expect = 1e-21
 Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 4/74 (5%)

Query: 81  PSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA--- 137
             EMKA  + ++G   VLK  +    P+ +++Q+LIKV AA+LNP+D K R G       
Sbjct: 4   MKEMKAIQFDQFGPPKVLKLVD-TPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKK 62

Query: 138 TDSPLPTVPGYDVA 151
             + LP+  GYD +
Sbjct: 63  LKNNLPSGLGYDFS 76

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  114 bits (288), Expect = 5e-30
 Identities = 27/161 (16%), Positives = 52/161 (32%), Gaps = 31/161 (19%)

Query: 147 GYDVAAT-SSTRNLEFLKSLGADLAIDYTKDNFEDL----PEKFDVVYDAIG---QCDRA 198
           G  V  T S    +E+ K +GAD+ +++ +           E  D V+         D  
Sbjct: 175 GLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDMYYDDM 234

Query: 199 VKAIKEGGTVVALTGAVTPP------------GFRFVVT----------SNGEVLKKLNP 236
           ++ +K  G +  +                      F+             + E L+ +  
Sbjct: 235 IQLVKPRGHIATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITN 294

Query: 237 YLESGKVKPIIDP-KGPFPFSQVVEAFSYIETNKATGKVVI 276
            +E    +P             + +A   +E+N   GK+VI
Sbjct: 295 KVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVI 335

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 73.0 bits (180), Expect = 5e-15
 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 8/71 (11%)

Query: 84  MKAWLYGEYGGV---DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDS 140
           +KA  + +   +   ++ K    + +P+ K  ++L+K+ + ++NPVD K+R         
Sbjct: 3   LKAIGFEQPFKLSDGNLFKTFN-LDIPEPKVHEILVKIQSISVNPVDTKQRLMDVS---- 57

Query: 141 PLPTVPGYDVA 151
             P V G+D  
Sbjct: 58  KAPRVLGFDAI 68

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  114 bits (287), Expect = 9e-30
 Identities = 43/167 (25%), Positives = 64/167 (38%), Gaps = 39/167 (23%)

Query: 147 GYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDL---PEKFDVVYDAIGQ--CDRAVKA 201
              V A  S    E ++ LGAD  IDY   + E+     + FD + D +G      A   
Sbjct: 208 DAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDF 267

Query: 202 IKE--GGTVVALTGAVTPPGFR------------------------------FVVTSNGE 229
           +K+  G T V L         R                                  ++G 
Sbjct: 268 LKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGP 327

Query: 230 VLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
            L  +   +++GK++P+I+    FPFS+V EAF  +E   A GK VI
Sbjct: 328 CLDDIAELVDAGKIRPVIEQT--FPFSKVPEAFLKVERGHARGKTVI 372

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 86.7 bits (215), Expect = 1e-19
 Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 15/98 (15%)

Query: 68  SSTEAEPTKVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVK-EDQVLIKVVAAALNPV 126
            S+  +      +  +  AW+  +YG  +VL+F + + +P +   ++V++KV AA++NP+
Sbjct: 7   HSSGVDLG-TENLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPI 65

Query: 127 DGKRRQGKFKA-------------TDSPLPTVPGYDVA 151
           D   R G                      P   G DV+
Sbjct: 66  DVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVS 103

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  109 bits (275), Expect = 2e-28
 Identities = 24/154 (15%), Positives = 50/154 (32%), Gaps = 30/154 (19%)

Query: 147 GYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQC--DRAVKAIKE 204
           GY V   S++ +       G      +       + +K+  ++DA+        V ++K 
Sbjct: 166 GYVVDLVSASLSQALAAKRGVR----HLYREPSQVTQKYFAIFDAVNSQNAAALVPSLKA 221

Query: 205 GGTVVALTGAVTPP----------------------GFRFVVTSNGEVLKKLNPYLESGK 242
            G ++ +   +  P                      G R       +  + L   +  GK
Sbjct: 222 NGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGK 281

Query: 243 VKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
           ++        F F Q++EA  + E  K    + +
Sbjct: 282 MEIAAP--DIFRFEQMIEALDHSEQTKLKTVLTL 313

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 80.3 bits (199), Expect = 1e-17
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 84  MKAWLYGEYGG-VDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPL 142
           M+      Y      +  +  V +P +  D +L++  A  +NPVD K  +      +   
Sbjct: 2   MEQHQVWAYQTKTHSVTLNS-VDIPALAADDILVQNQAIGINPVDWKFIKANPI--NWSN 58

Query: 143 PTVPGYDVA 151
             VPG D A
Sbjct: 59  GHVPGVDGA 67

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  106 bits (266), Expect = 6e-27
 Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 31/160 (19%)

Query: 147 GYDVAATSSTRNLEFLKSLGADLAIDYTKDNF----EDLPEKFDVVYDAIGQ--CDRAVK 200
           G  V AT+   +LE+++ LGA       +           + FD+VYD +G    D +  
Sbjct: 175 GARVFATARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASFS 234

Query: 201 AIKEGGTVV------------------ALTGAVT--PPGFRFVVTSNGEVLKKLNPYLES 240
           A+K  G VV                    +G  T         +   GE+L++ +  +++
Sbjct: 235 AVKRFGHVVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQT 294

Query: 241 GKVKPIIDPKGPFPFSQVVEAFSYI----ETNKATGKVVI 276
           GK+ P +DP+  F  +++  A+  +    +  +  GK+ I
Sbjct: 295 GKLAPRLDPR-TFSIAEIGSAYDAVLGRNDVPRQRGKIAI 333

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 86.9 bits (216), Expect = 7e-20
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 81  PSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDS 140
              M A +  E  G  VL    K+  PQ    QVL+++ A+  NP+D K R G+      
Sbjct: 5   TPTMIAAVVEEANGPFVL---RKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQ 61

Query: 141 PLPTVPGYDVA 151
           PLP + G D+A
Sbjct: 62  PLPAILGMDLA 72

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  103 bits (260), Expect = 5e-26
 Identities = 29/156 (18%), Positives = 56/156 (35%), Gaps = 29/156 (18%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDL----PEKFDVVYDAIG---QCDRAVKAI 202
           +A  S     E++KSLGA   ID++K    ++          V+               I
Sbjct: 201 IATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLI 260

Query: 203 KEGGTVVALTGAV--------------------TPPGFRFV-VTSNGEVLKKLNPYLESG 241
              G    +                        T P F    ++  G +L  ++  ++ G
Sbjct: 261 APQGRFCLIDDPSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEG 320

Query: 242 KVKPIIDPK-GPFPFSQVVEAFSYIETNKATGKVVI 276
           +++  +  +  P   + + +A + +E+  A GKVVI
Sbjct: 321 RLRTTLTNRLSPINAANLKQAHALVESGTARGKVVI 356

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 79.7 bits (197), Expect = 2e-17
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 68  SSTEAEPTKVGTVPSEMKAWLYGEYGGVD---VLKFDEKVTVPQVKEDQVLIKVVAAALN 124
            S+  +          MKA  Y +   +     L  D ++  P      +L++V A ++N
Sbjct: 7   HSSGVDLGTENLYFQSMKAVGYNKPAPITDDASLL-DIELPKPAPAGHDILVEVKAVSVN 65

Query: 125 PVDGKRRQGKFKATDSPLPTVPGYDVA 151
           PVD K R+      D     V GYD A
Sbjct: 66  PVDYKVRRSTPP--DGTDWKVIGYDAA 90

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score = 97.7 bits (244), Expect = 8e-24
 Identities = 37/152 (24%), Positives = 58/152 (38%), Gaps = 24/152 (15%)

Query: 147 GYDVAATSST-RNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIGQC--DR 197
           G  V AT+ +   L   K+LGAD  ++YT  ++          +  D V D  G    + 
Sbjct: 191 GARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGALYFEG 250

Query: 198 AVKAIKEGGTVV---ALTGAVTPPGFRFVVTSNG----------EVLKKLNPYLESGKVK 244
            +KA   GG +    A +G      F  V                 L  +  ++E GK+K
Sbjct: 251 VIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLK 310

Query: 245 PIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
           P++      P     E    +E  +  GKVV+
Sbjct: 311 PVVGQV--LPLEAAAEGHRLLEERRVFGKVVL 340

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score = 72.2 bits (178), Expect = 9e-15
 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           M+A +    GG +VL+  + + VP+    +V +++ AAALN +D   R+G       PLP
Sbjct: 1   MRAVVMRARGGPEVLEVAD-LPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKL-PLP 58

Query: 144 TVPGYDVA 151
            V G D +
Sbjct: 59  HVLGADGS 66

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 95.6 bits (238), Expect = 7e-23
 Identities = 30/170 (17%), Positives = 51/170 (30%), Gaps = 40/170 (23%)

Query: 147 GYDVAATSSTRNLEFLKSLGADLAIDYTKDNFED-----LPEKFDVVYDAIGQCD---RA 198
           GY   AT S  N +  KS GA+   DY   N                 D I   +     
Sbjct: 189 GYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFC 248

Query: 199 VKAI-KEGGTVVALTGAVTPPGFRFVVTSNG----------------------------- 228
             AI + GG  V+L         R +VT++                              
Sbjct: 249 FAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFG 308

Query: 229 -EVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATG-KVVI 276
            ++ +     +E G++           F  + +    +   + +G K+V+
Sbjct: 309 EDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVV 358

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 70.9 bits (174), Expect = 3e-14
 Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 8/71 (11%)

Query: 81  PSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDS 140
           P +  A    ++  V V         P +  DQV ++V A A+NP D   R         
Sbjct: 9   PPQQTALTVNDHDEVTVW---NAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFA----- 60

Query: 141 PLPTVPGYDVA 151
                 G D A
Sbjct: 61  TPWAFLGTDYA 71

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 93.3 bits (232), Expect = 9e-22
 Identities = 27/165 (16%), Positives = 57/165 (34%), Gaps = 40/165 (24%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLP-----------------------EKFD 186
           +   SS +  E  +++GA+  ID   + +                           E  D
Sbjct: 257 ICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDID 316

Query: 187 VVYDAIGQC--DRAVKAIKEGGTVV---ALTGAVTPPGFRFVVTS----------NGEVL 231
           +V++  G+     +V   ++GGT+    + +G +     R++  S          N    
Sbjct: 317 IVFEHPGRETFGASVFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREA 376

Query: 232 KKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
            + N  +  G++ P +     +      +A   +  N   GKV +
Sbjct: 377 WEANRLIAKGRIHPTLS--KVYSLEDTGQAAYDVHRNLHQGKVGV 419

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 56.0 bits (135), Expect = 4e-09
 Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 32/127 (25%)

Query: 56  LGVQASASQAAASSTEAEPTKVG--TVPSEMKAW-------------LYGEYGGVDVLKF 100
           + +       A  S ++ P  +    +P   +A                 +      +  
Sbjct: 1   MSLTVKDILDAIQSPDSTPADIAALPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHL 60

Query: 101 DEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDS---------------PLP-T 144
           D+ V VP++   + L+ V+A+++N         +  +T                  LP  
Sbjct: 61  DD-VPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYH 119

Query: 145 VPGYDVA 151
           V G D+A
Sbjct: 120 VIGSDLA 126

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 92.3 bits (230), Expect = 9e-22
 Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 25/152 (16%)

Query: 147 GYDVAATSST-RNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIGQ--CDR 197
           G +V  TSS+   L+   +LGAD  I+  ++++ +           D + +  G     +
Sbjct: 213 GAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQ 272

Query: 198 AVKAIKEGGTVV---ALTGAVTPPGFRFVVTSNGEV----------LKKLNPYLESGKVK 244
           ++KA+   G +     L G         ++  +  V          L+ L   ++   +K
Sbjct: 273 SLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLGLK 332

Query: 245 PIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
           P+ID    + F++V EA ++++     GKVVI
Sbjct: 333 PVID--MRYKFTEVPEALAHLD-RGPFGKVVI 361

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 64.6 bits (158), Expect = 5e-12
 Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 16/100 (16%)

Query: 52  SYLPLGVQASASQAAASSTEAEPTKVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKE 111
           S + LG +    Q+              +   M+ W   E      LK  E   VP+  E
Sbjct: 9   SGVDLGTENLYFQS-------------MMSKWMQEWST-ETVAPHDLKLAE-RPVPEAGE 53

Query: 112 DQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVA 151
             ++++ +A +LN  D    +      D   P VP  D++
Sbjct: 54  HDIIVRTLAVSLNYRDKLVLETGM-GLDLAFPFVPASDMS 92

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 93.0 bits (231), Expect = 1e-21
 Identities = 36/165 (21%), Positives = 64/165 (38%), Gaps = 40/165 (24%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFED-----------------------LPEKFD 186
           VA  SS +    +++LG DL I+  +    D                          + D
Sbjct: 249 VAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPD 308

Query: 187 VVYDAIGQ--CDRAVKAIKEGGTVV---ALTGAVTPPGFRFVVTS----------NGEVL 231
           +V++  G+     +V   + GGTVV   + +G +     R++             N E  
Sbjct: 309 IVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQ 368

Query: 232 KKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
           +  N   ESG V P +     +P ++  EA   ++T++  GKV +
Sbjct: 369 QATNRLFESGAVVPAMS--AVYPLAEAAEACRVVQTSRQVGKVAV 411

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 62.1 bits (151), Expect = 3e-11
 Identities = 22/116 (18%), Positives = 37/116 (31%), Gaps = 28/116 (24%)

Query: 63  SQAAASSTEAEPTKVGTVPSEMKAWL-----------YGEYGGVDVLKFDEKVTVPQVKE 111
           S+A      A   +   VP    A               +      L+  E V +P++  
Sbjct: 4   SRAVLDGASAAEIEAAPVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGE-VPMPELAP 62

Query: 112 DQVLIKVVAAALNPVD----------------GKRRQGKFKATDSPLPTVPGYDVA 151
           D+VL+ V+A+++N                      RQG +         V G D +
Sbjct: 63  DEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCS 118

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 81.1 bits (201), Expect = 7e-18
 Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 34/162 (20%)

Query: 147 GYDVAATSSTRN-LEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIGQ--CDRA 198
           G +V AT+ +    E  + LGA   I+Y  ++F  +      +  D++ D IG    +R 
Sbjct: 192 GAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAAYFERN 251

Query: 199 VKAIKEGGTVV--ALTGAVTPPGF--------RFVVTS--------------NGEVLKKL 234
           + ++ + G +   A  G               R  VT                 ++L ++
Sbjct: 252 IASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEV 311

Query: 235 NPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
            P LE+G V P+I     F F  V +A   +E     GKV++
Sbjct: 312 WPLLEAGTVAPVIHKV--FAFEDVADAHRLLEEGSHVGKVML 351

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 68.8 bits (169), Expect = 2e-13
 Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 79  TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT 138
           ++P EM+      +GG DV+   +   +P   E +VL++  A  +N  D  +RQG +   
Sbjct: 24  SLPQEMRFVDLKSFGGPDVMVIGK-RPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP- 81

Query: 139 DSPLPTVPGYDVA 151
                 + G +++
Sbjct: 82  PKDASPILGLELS 94

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 79.2 bits (196), Expect = 4e-17
 Identities = 39/167 (23%), Positives = 60/167 (35%), Gaps = 40/167 (23%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG--QCDRAVKAI 202
           +   SS     FLKSLG D  I+Y  +    +     PE  DVVY+++G    D AV A+
Sbjct: 192 IGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDAL 251

Query: 203 KEGGTVV---ALTGAVTPPGFR--------------------FVVTS----NGEVLKKLN 235
              G ++    ++G  TP G                      F +          +  L 
Sbjct: 252 ATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLL 311

Query: 236 PYLESGKVKPIIDPKGP------FPFSQVVEAFSYIETNKATGKVVI 276
               SG +   +D               +  A +Y+   K TGK+V+
Sbjct: 312 EMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 358

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 56.1 bits (136), Expect = 3e-09
 Identities = 10/77 (12%), Positives = 24/77 (31%), Gaps = 3/77 (3%)

Query: 79  TVPSEMKAWLYGEYG--GVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFK 136
              S M+  +         + +       VP   +  +L++     +N  D     G++ 
Sbjct: 19  YFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYD 78

Query: 137 ATDSPLPTVPGYDVAAT 153
            +    P   G++    
Sbjct: 79  PS-VKPPFDIGFEGIGE 94

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 79.2 bits (196), Expect = 4e-17
 Identities = 21/162 (12%), Positives = 49/162 (30%), Gaps = 37/162 (22%)

Query: 150 VAATSSTRNLE----FLKSLGADLAIDYTKDNFEDLPEKF------DVVYDAIG--QCDR 197
           +       +++     LKSLGA+  I   +    ++   F       +  + +G      
Sbjct: 196 INVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTE 255

Query: 198 AVKAIKEGGTVV---ALTGAVTPP-------------GF---RFVVTSNGEVLKK----L 234
            ++ +  GGT+V    +                    GF   ++    + +  K+    L
Sbjct: 256 LLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTL 315

Query: 235 NPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
              +  G++      +   P      A         + K ++
Sbjct: 316 CDLIRRGQLTAPACSQ--VPLQDYQSALEASMKPFISSKQIL 355

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 70.8 bits (174), Expect = 3e-14
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 7/78 (8%)

Query: 79  TVPSEMKAWLYGEYGG-VDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGK--F 135
           ++P+ ++A +YG +G    V++    + +  V+   V +K++AA +NP D    QG    
Sbjct: 22  SMPARVRALVYGHHGDPAKVVELKN-LELAAVRGSDVRVKMLAAPINPSDINMIQGNYGL 80

Query: 136 KATDSPLPTVPGYDVAAT 153
                 LP V G +  A 
Sbjct: 81  LP---ELPAVGGNEGVAQ 95

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 78.0 bits (193), Expect = 8e-17
 Identities = 37/158 (23%), Positives = 59/158 (37%), Gaps = 32/158 (20%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEK-----FDVVYDAIGQC--DRAVKAI 202
           +A  + T   EF+KS+GAD+ +   +   + + E       D+V D IG    D AV+ +
Sbjct: 188 IAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTL 247

Query: 203 KEGGT--VVALTGAVTPP--------------GF---RFVVT---SNGEVLKKLNPYLES 240
              G   VV       P               G     F+ T      E    L   +  
Sbjct: 248 ASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAE 307

Query: 241 GKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
           G ++P +  +   P S+  +A       K  GK+V+ P
Sbjct: 308 G-MRPPVSAR--IPLSEGRQALQDFADGKVYGKMVLVP 342

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 64.2 bits (157), Expect = 6e-12
 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 81  PSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGK--FKAT 138
           P  MKA       G + L + + V  P    + V++ V AA +   D    +G+   K  
Sbjct: 19  PGSMKAIQAQSLSGPEGLVYTD-VETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKM- 76

Query: 139 DSPLPTVPGYDVA 151
               P VPG + A
Sbjct: 77  --EPPFVPGIETA 87

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 78.0 bits (193), Expect = 1e-16
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 29/154 (18%)

Query: 150 VAAT-SSTRNLEFLKSLGADLAIDYTKDNFEDLPEKF------DVVYDAIGQ--CDRAVK 200
           +  T  +    + +   GA    ++ + N+ D  +K+      D++ + +      + + 
Sbjct: 198 ILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLS 257

Query: 201 AIKEGGTVV--ALTGAVTPP------------G---FRFVVTSNGEVLKKLNPYLESGKV 243
            +  GG V+     G +               G   F        +    L   +E G +
Sbjct: 258 LLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWL 317

Query: 244 KPIIDPKGPFPFSQVVEAF-SYIETNKATGKVVI 276
           KP+I  +  +P  +V EA  + I  + ATGK+++
Sbjct: 318 KPVIGSQ--YPLEKVAEAHENIIHGSGATGKMIL 349

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 76.4 bits (189), Expect = 3e-16
 Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 79  TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT 138
           T    M+A    E+GG +VLK    + VP  K+ QVLIKV A  +NPV+   R G + + 
Sbjct: 25  TGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTY-SR 83

Query: 139 DSPLPTVPGYDVA 151
              LP  PG DVA
Sbjct: 84  KPLLPYTPGSDVA 96

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 76.5 bits (189), Expect = 3e-16
 Identities = 24/164 (14%), Positives = 44/164 (26%), Gaps = 35/164 (21%)

Query: 147 GYDVAATSSTRN-LEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDR 197
           G+    T      +  LK +GA   ++    +FE         E+  +  DA+       
Sbjct: 189 GFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGPLASA 248

Query: 198 AVKAIKEGGTVV---ALTGAVTPPGF-------RFVVT-------------SNGEVLKKL 234
              A+ +    +    L    T              +                G  + + 
Sbjct: 249 IFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEA 308

Query: 235 NPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
                 G+    +      P ++ +      E  K  GKV I P
Sbjct: 309 QKRFSDGRWSTDVT--AVVPLAEAIAWV-PAELTKPNGKVFIRP 349

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 63.8 bits (156), Expect = 8e-12
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 14/87 (16%)

Query: 79  TVPSEMKAWLYGEYGG------------VDVLKFDEKVTVPQVKEDQVLIKVVAAALNPV 126
           T+PSEMKA L    G                L+    + VP     QVLIKV  A++NP 
Sbjct: 6   TIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGR-IAVPAPGPSQVLIKVNLASINPS 64

Query: 127 DGKRRQGKFKATDSPLPTVPGYDVAAT 153
           D    +G++           G++   T
Sbjct: 65  DVAFIKGQYGQP-RVKGRPAGFEGVGT 90

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 75.7 bits (187), Expect = 5e-16
 Identities = 31/176 (17%), Positives = 54/176 (30%), Gaps = 51/176 (28%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKF-----DVVYDAIGQ--CDRAVKAI 202
           V  T+ST   E +K     L  D   D +    ++      D+V D +      + +  +
Sbjct: 171 VFGTASTFKHEAIKDSVTHL-FDRNAD-YVQEVKRISAEGVDIVLDCLCGDNTGKGLSLL 228

Query: 203 KEGGTVV--ALTGAVTPPGFRFVVTSNG-------------------------------- 228
           K  GT +    +  VT     F   +                                  
Sbjct: 229 KPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQG 288

Query: 229 ------EVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
                  V++KL       K+KP++D    +   +V EA   I      GK+++  
Sbjct: 289 RAGLIRGVVEKLIGLYNQKKIKPVVDSL--WALEEVKEAMQRIHDRGNIGKLILDV 342

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 69.2 bits (170), Expect = 1e-13
 Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 83  EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPL 142
           EM+A +   +GG++ L+      +P+ ++ ++ I+V A  LN +D   RQG         
Sbjct: 3   EMRAVVLAGFGGLNKLRLFR-KAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNP-PKT 60

Query: 143 PTVPGYDVA 151
           P VPG++ +
Sbjct: 61  PLVPGFECS 69

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 74.2 bits (183), Expect = 2e-15
 Identities = 34/166 (20%), Positives = 68/166 (40%), Gaps = 38/166 (22%)

Query: 147 GYDVAATSSTRN-LEFLKSLGADLAIDYTKDNFEDLPEKF------DVVYDAIGQ--CDR 197
           G     T+ ++  L+  + LGA    +Y K++F +   KF      +++ D IG    ++
Sbjct: 187 GAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEK 246

Query: 198 AVKAIKEGGTVV--ALTGAVTPPGF--------RFVVTSNG--------------EVLKK 233
            V  +   G  V   L G     G         R  + ++                  ++
Sbjct: 247 NVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQ 306

Query: 234 LNPYLES---GKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
           + P+  +    ++ P++D    +P +++ EA  Y+E NK  GK+V+
Sbjct: 307 ILPHFSTEGPQRLLPVLDRI--YPVTEIQEAHKYMEANKNIGKIVL 350

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 67.7 bits (166), Expect = 4e-13
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 79  TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT 138
                M A  + + GG + L   E V  P   E +VL+KV A+ALN  D  +RQG++   
Sbjct: 18  LYFQSMLAVHFDKPGGPENLYVKE-VAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP- 75

Query: 139 DSPLPTVPGYDVA 151
                 + G + +
Sbjct: 76  PPGASNILGLEAS 88

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 73.3 bits (181), Expect = 2e-15
 Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 27/151 (17%)

Query: 150 VAAT-SSTRNLEFLKSLGADLAIDYTKDNFEDLPEK-FDVVYDAIG-QCDRAVKAIKEGG 206
           V A  S    L    +LGA+ A  Y +           D+V +  G + + ++  +  GG
Sbjct: 153 VLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGLLAHGG 212

Query: 207 --TVVALTGAVTPP--------------GF--RFVVT---SNGEVLKKLNPYLESGKVKP 245
               +        P              GF    ++       E L  L P L   +++P
Sbjct: 213 RLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLG-RELRP 271

Query: 246 IIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
           ++ P   FPF++   AF  +     TGKVV+
Sbjct: 272 VVGPV--FPFAEAEAAFRALLDRGHTGKVVV 300

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 54.1 bits (131), Expect = 1e-08
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           MKAW+    GG   L     +  P+ +E +V+++V A  LN  D   R G +       P
Sbjct: 1   MKAWVLKRLGGPLEL---VDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTR-LHPP 56

Query: 144 TVPGYDVA 151
            +PG +V 
Sbjct: 57  FIPGMEVV 64

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 71.1 bits (175), Expect = 2e-14
 Identities = 25/161 (15%), Positives = 53/161 (32%), Gaps = 34/161 (21%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIGQ--CDRAVKA 201
           +A T + ++ E L  LGA   ID +     +           D   D+IG    +    +
Sbjct: 173 IAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFS 232

Query: 202 IKEGGTVV---ALTGAVTPPGF-----RFVVT--------------SNGEVLKKLNPYLE 239
           ++  G  +    L+G            +                     E  + L   +E
Sbjct: 233 LRPNGHFLTIGLLSGIQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVE 292

Query: 240 SGKVKPI-IDPKGPFPFSQVVEAFSYIETN-KATGKVVIHP 278
           + +++ + +     +  + V  A   +++  K  GKV +  
Sbjct: 293 NEQLRFMKVHST--YELADVKAAVDVVQSAEKTKGKVFLTS 331

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 68.0 bits (167), Expect = 3e-13
 Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 84  MKAWLYGEYGG-VDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPL 142
            K   + ++G   DVL+ +    +  +K+++V ++++   +NP D     G +     PL
Sbjct: 5   GKLIQFHKFGNPKDVLQVEY-KNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHR-IPL 62

Query: 143 PTVPGYDVA 151
           P +PGY+  
Sbjct: 63  PNIPGYEGV 71

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 68.0 bits (167), Expect = 2e-13
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 4/73 (5%)

Query: 79  TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT 138
           T+P + K  L  E GG DV+K+++   VP + E+++LIK     +N ++   R+G +   
Sbjct: 4   TIPEQQKVILIDEIGGYDVIKYED-YPVPSISEEELLIKNKYTGVNYIESYFRKGIYPC- 61

Query: 139 DSPLPTVPGYDVA 151
               P V G + +
Sbjct: 62  --EKPYVLGREAS 72

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 64.2 bits (157), Expect = 5e-12
 Identities = 33/159 (20%), Positives = 62/159 (38%), Gaps = 32/159 (20%)

Query: 151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIGQ--CDRAVKAI 202
           A  S+   L+  K  GA+  I+ +K++           +  D  +D++G+   + ++ A+
Sbjct: 178 AVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAAL 237

Query: 203 KEGGTVV---ALTGAVTP-------PGFRFVV-------TSNGEVL----KKLNPYLESG 241
           K  G  V     +G + P       P    +V        ++ E       +    + S 
Sbjct: 238 KRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSK 297

Query: 242 KVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPIP 280
           K+   I     +P      A + IE+ K  GK+V+  IP
Sbjct: 298 KLNIKIYKT--YPLRDYRTAAADIESRKTVGKLVLE-IP 333

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 68.2 bits (167), Expect = 3e-13
 Identities = 20/173 (11%), Positives = 46/173 (26%), Gaps = 45/173 (26%)

Query: 147 GYDVAATSSTRN-----LEFLKSLGADLAIDYTKDNFEDLPEKF-----------DVVYD 190
            ++  +    R      +  LK LGA   I   ++N  +                 +  +
Sbjct: 192 NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALN 251

Query: 191 AIG--QCDRAVKAIKEGGTVV---ALTGAVTPP-------------GF---RFVVTS--- 226
            +G        + +   G ++    ++                   GF     +  +   
Sbjct: 252 CVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKEL 311

Query: 227 NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIE---TNKATGKVVI 276
               L ++  + E GK+      +    +          +    N   GK +I
Sbjct: 312 KTSTLNQIIAWYEEGKLTDAKSIE--TLYDGTKPLHELYQDGVANSKDGKQLI 362

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 60.5 bits (147), Expect = 9e-11
 Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 10/80 (12%)

Query: 84  MKAWLYGEYGG-VDVLKFDEK-VTVPQVKEDQVLIKVVAAALNPVDGKRRQGK------- 134
            +A LY ++G   DVL      +    +  ++V++K + + +NP D  + QG        
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63

Query: 135 -FKATDSPLPTVPGYDVAAT 153
                 +      G +    
Sbjct: 64  TTGFGTTEPAAPCGNEGLFE 83

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 67.2 bits (165), Expect = 5e-13
 Identities = 24/153 (15%), Positives = 49/153 (32%), Gaps = 37/153 (24%)

Query: 159 LEFLKSLGADLAIDYTKDNFEDLPEK------FDVVYDAIGQ---CDRAVKAIKEGGTVV 209
           L   KS GA    + ++ +   +           ++ +  G     + AV+       + 
Sbjct: 198 LALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLA 257

Query: 210 ALTGAVTPPGFRFVVTSNGEVLKK-----------LNPY-----------LESGK--VKP 245
            +              + G++L+K            +P+           L   K  ++P
Sbjct: 258 LV--GTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEP 315

Query: 246 IIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
           +I  +    F    +A   I  N   GKV++ P
Sbjct: 316 LIAHR--GSFESFAQAVRDIARNAMPGKVLLIP 346

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 65.7 bits (161), Expect = 1e-12
 Identities = 30/159 (18%), Positives = 62/159 (38%), Gaps = 30/159 (18%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIGQ--CDRAVKA 201
           +    + +  +     GA   I+Y +++  +        +K  VVYD++G+   +R++  
Sbjct: 169 IGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDC 228

Query: 202 IKEGGTVV---ALTGAVTP--------PGFRFVV-------TSNGEVL----KKLNPYLE 239
           ++  G +V     +GAVT          G  +V         +  E L     +L   + 
Sbjct: 229 LQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIA 288

Query: 240 SGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
           SG +K  +  +  +P      A   +E+    G  ++ P
Sbjct: 289 SGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP 327

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 60.3 bits (147), Expect = 8e-11
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
                + ++GG +VL+  E  T     E+++ ++  A  +N +D   R G +      LP
Sbjct: 2   ATRIEFHKHGGPEVLQAVE-FTPADPAENEIQVENKAIGINFIDTYIRSGLYPP--PSLP 58

Query: 144 TVPGYDVA 151
           +  G + A
Sbjct: 59  SGLGTEAA 66

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 63.8 bits (156), Expect = 6e-12
 Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 34/164 (20%)

Query: 147 GYDVAATSSTRN-LEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIGQ--CDR 197
           G  V  T ST    E  + LG    I+Y+  +F ++       +  DVVYD+IG+    +
Sbjct: 170 GATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQK 229

Query: 198 AVKAIKEGGTVV---ALTGAVTP-----------------PGFRFVVTSNGEVL---KKL 234
           ++  ++  G        +G   P                 P     +++  E+    K L
Sbjct: 230 SLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCL 289

Query: 235 NPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
              +++G +   +     FP  +   A  Y+   +  G +V+ P
Sbjct: 290 FDAVKAGVLHSSVAKT--FPLREAAAAHKYMGGRQTIGSIVLLP 331

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 62.2 bits (152), Expect = 2e-11
 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFK-ATDSPL 142
           + A +  + GG D   ++E V V      QV ++  A  +N +D   R G          
Sbjct: 2   VMAAVIHKKGGPDNFVWEE-VKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEP 60

Query: 143 PTVPGYDVA 151
           P V G++ A
Sbjct: 61  PIVVGFEAA 69

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 63.4 bits (155), Expect = 9e-12
 Identities = 34/158 (21%), Positives = 57/158 (36%), Gaps = 32/158 (20%)

Query: 151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIGQ--CDRAVKAI 202
              SS       K+LGA   IDY+ ++           +K  VVYD +GQ     ++ ++
Sbjct: 170 GTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSV 229

Query: 203 KEGGTVV---ALTGAVTP--------PGFRFVV-------TSNGEVL----KKLNPYLES 240
              G VV     +G V+             +V         +N + L     +L   L S
Sbjct: 230 APRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLAS 289

Query: 241 GKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
           GK+K        +      +A   +   + TG  ++ P
Sbjct: 290 GKLKVDGI--EQYALKDAAKAQIELSARRTTGSTILIP 325

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 61.4 bits (150), Expect = 3e-11
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
            K   +   GG +VL++ +           V+++  A  LN +D   R G + A    LP
Sbjct: 2   AKRIQFSTVGGPEVLEYVD-FEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA--PFLP 58

Query: 144 TVPGYDVA 151
           +  G + A
Sbjct: 59  SGLGAEGA 66

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score = 63.0 bits (154), Expect = 1e-11
 Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 33/148 (22%)

Query: 159 LEFLKSLGADLAIDYTKDNFED--------LPEKFDVVYDAIGQ---CDRAVKAIKEGGT 207
               + +GA   +D +  +  +        +P   DVV +  G      ++ +  K GGT
Sbjct: 220 RRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGT 279

Query: 208 VVALTGAVTPPGFRFVVTSNGEVLKKLN---------------PYLESGK--VKPIIDPK 250
           VV L   V P G +  +     + ++L                  + +G   +  +I  +
Sbjct: 280 VVIL--GVLPQGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATGAIEIDRMISRR 337

Query: 251 GPFPFSQVVEAFSYIETNKATGKVVIHP 278
                 +  +  S         KV++ P
Sbjct: 338 --ISLDEAPDVISNPA-AAGEVKVLVIP 362

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 60.7 bits (148), Expect = 7e-11
 Identities = 30/161 (18%), Positives = 51/161 (31%), Gaps = 38/161 (23%)

Query: 147 GYDVAATS-STRNLEFLKSLGADLAIDYTKDNFEDLPEK---------FDVVYDAIGQ-- 194
           G  +         +E  K  GAD  I+ +    +D   +          D V D      
Sbjct: 196 GATIIGVDVREEAVEAAKRAGADYVINASM---QDPLAEIRRITESKGVDAVIDLNNSEK 252

Query: 195 -CDRAVKAIKEGGTVVAL---TGAVTPPGFRFVVTSN-------------GEVLKKLNPY 237
                 KA+ + G  V +      +        ++                 +++     
Sbjct: 253 TLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMR----L 308

Query: 238 LESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
            E+GKVKP+I         +  EA   +E  KA G+ V+ P
Sbjct: 309 AEAGKVKPMITKT--MKLEEANEAIDNLENFKAIGRQVLIP 347

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 42.2 bits (100), Expect = 9e-05
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 9/74 (12%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDS--- 140
           M+A    E G    L   +++ VP+ K  QVLIKV AA +   D   RQG+F        
Sbjct: 1   MRAVRLVEIGKPLSL---QEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVED 57

Query: 141 ---PLPTVPGYDVA 151
               LP   G+++A
Sbjct: 58  LGVKLPVTLGHEIA 71

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score = 57.6 bits (140), Expect = 8e-10
 Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 27/146 (18%)

Query: 159 LEFLKSLGADLAIDYTKDNFED--------LPEKFDVVYDAIG--QC-DRAVKAIKEGGT 207
           L   K +GADL +  +K++ ++        L  K +V  +  G        + A + GGT
Sbjct: 209 LSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGT 268

Query: 208 VVALTGAVTPPGFRFVVTSNGEVLKK-----LNPY------LESGK--VKPIIDPKGPFP 254
           +V +           +  +  EV  K      N +      L S    VKP++     FP
Sbjct: 269 LVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVT--HRFP 326

Query: 255 FSQVVEAFSYIETNKATGKVVIHPIP 280
             + +EAF   +      K+++   P
Sbjct: 327 LEKALEAFETFKKGLG-LKIMLKCDP 351

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 56.2 bits (136), Expect = 3e-09
 Identities = 27/151 (17%), Positives = 46/151 (30%), Gaps = 36/151 (23%)

Query: 159 LEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG------QCDRAVKAIKEGG 206
               K LGAD  ID TK+NF +            +  +A G           V     G 
Sbjct: 251 RNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGI 310

Query: 207 TV-VALTGAVTPPGFRFVVTSNGEVLKKLN-----------------PYLESG-KVKPII 247
              VA+         +  +T     +++                     + SG  +  II
Sbjct: 311 NATVAIVA---RADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASGMDMTKII 367

Query: 248 DPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
                    ++ E    ++T+K+  KV +  
Sbjct: 368 SKT--VSMEEIPEYIKRLQTDKSLVKVTMLN 396

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score = 55.7 bits (135), Expect = 4e-09
 Identities = 25/143 (17%), Positives = 50/143 (34%), Gaps = 30/143 (20%)

Query: 159 LEFLKSLGADLAIDYTKDNFEDLPEK-----FDVVYDAIGQ---CDRAVKAIKEGGTVVA 210
           L+  + LGAD  +D  +D  + + E       +V  D +G     D     +   G ++ 
Sbjct: 224 LKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLII 283

Query: 211 --LTGAVTPPGFRFVVTSN-------------GEVLKKLNPYLESGKVKPIIDPKGPFPF 255
               G +  P  R + +                E++         GKV+  +D       
Sbjct: 284 VGYGGELRFPTIRVISSEVSFEGSLVGNYVELHELVT----LALQGKVRVEVD---IHKL 336

Query: 256 SQVVEAFSYIETNKATGKVVIHP 278
            ++ +    +E  +  G+ V+ P
Sbjct: 337 DEINDVLERLEKGEVLGRAVLIP 359

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 51.4 bits (124), Expect = 1e-07
 Identities = 22/145 (15%), Positives = 51/145 (35%), Gaps = 30/145 (20%)

Query: 159 LEFLKSLGADLAIDYTKDNFED-----LPEKFDVVYDAIGQ---CDRAVKAIKEGGTVVA 210
           L F +       ++  +++  +          +V+ +  G      + + A+  GG    
Sbjct: 202 LAFARPYADR-LVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARI 260

Query: 211 L---TGAVTPPGFRFVVTSNGEVLKKLNPY------------LESGK--VKPIIDPKGPF 253
           L   +  +       +V   G     +               + SG+  + P++  +   
Sbjct: 261 LGIPSDPIRFDLAGELVM-RGITAFGIAGRRLWQTWMQGTALVYSGRVDLSPLLTHR--L 317

Query: 254 PFSQVVEAFSYIETNKATGKVVIHP 278
           P S+  EAF  + + +A  KV++ P
Sbjct: 318 PLSRYREAFGLLASGQA-VKVILDP 341

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 29/147 (19%), Positives = 50/147 (34%), Gaps = 29/147 (19%)

Query: 159 LEFLKSLGADLAIDYTKD-NFEDLPEK---------FDVVYDAIG--QC-DRAVKAIKEG 205
           L+F K +  ++     +  + E+  +K           V  +  G       A+ A+K G
Sbjct: 217 LKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG 276

Query: 206 GTVVALTGAVTPPGFRFVVTSNGEV-LKKLNPY----------LESGK--VKPIIDPKGP 252
           G V  +          F+  S  EV L+    Y          +E+G   +  ++     
Sbjct: 277 GKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIRLVENGLVDLTRLVT--HR 334

Query: 253 FPFSQVVEAFSYIETNKATG-KVVIHP 278
           FP    ++AF      K    KV I  
Sbjct: 335 FPLEDALKAFETASDPKTGAIKVQIQS 361

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 33/144 (22%), Positives = 53/144 (36%), Gaps = 29/144 (20%)

Query: 159 LEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIGQ---CDRAVKAIKEGGTVV 209
            E  K +GAD  I+  +++              DV  +  G     ++ ++A+   G V 
Sbjct: 205 RELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVS 264

Query: 210 AL---TGAVTPPGFRFVVT-----------SNGEVLKKLNPYLESGK--VKPIIDPKGPF 253
            L    G VT      ++               E    ++  L+SGK  + PII     +
Sbjct: 265 LLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDPIIT--HKY 322

Query: 254 P-FSQVVEAFSYIETNKATGKVVI 276
             F +  EAF  +   K  GKVV 
Sbjct: 323 KGFDKYEEAFELMRAGKT-GKVVF 345

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 25/144 (17%), Positives = 50/144 (34%), Gaps = 32/144 (22%)

Query: 159 LEFLKSLGADLAIDYTKDNFEDLPEK---FDVVYDAIG--QC-DRAVKAIKEGGTVVAL- 211
           ++ ++ L A   +D  +   ED+P+     D +Y+A G  +   ++V+A+   G    L 
Sbjct: 215 IDIIEELDAT-YVDSRQTPVEDVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLG 273

Query: 212 TGAVTPPGFRFVVTSNGEVLKKLN-----------------PYLESGK--VKPIIDPKGP 252
             +               VL                      + +  K  ++ ++   G 
Sbjct: 274 VPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHFEAATVTFTKLPKWFLEDLVT--GV 331

Query: 253 FPFSQVVEAFSYIETNKATGKVVI 276
            P S+   AF   + +  T K  I
Sbjct: 332 HPLSEFEAAF---DDDDTTIKTAI 352

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 34/147 (23%), Positives = 53/147 (36%), Gaps = 29/147 (19%)

Query: 159 LEFLKSLGAD--LAIDYTKDNFEDLPEK--------FDVVYDAIG--QC-DRAVKAIKEG 205
           LE  K+ GAD  L +D  K+    + E+         +V  D  G  +C    +   + G
Sbjct: 205 LEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG 264

Query: 206 GTVVALTGAVTPPGFRFVVTSNGEVLKK-----LNPY------LESGK--VKPIIDPKGP 252
           GT++ +           V     E+  K      N Y      + SG+  VK ++     
Sbjct: 265 GTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGRCNVKQLVT--HS 322

Query: 253 FPFSQVVEAFSYIETNKATG-KVVIHP 278
           F   Q V+AF           KV+I  
Sbjct: 323 FKLEQTVDAFEAARKKADNTIKVMISC 349

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 33/158 (20%)

Query: 146 PGYDVAATS-STRNLEFLKSLGADLAIDYTKDNFEDLPEK-----FDVVYDAIGQ---CD 196
               +   S S ++ +F   LGAD   +  KD    + +        +  D +G      
Sbjct: 195 KNITIVGISRSKKHRDFALELGADYVSE-MKDAESLINKLTDGLGASIAIDLVGTEETTY 253

Query: 197 RAVKAIKEGGTVVAL---TGAVTPPGFRFVVTSN-------------GEVLKKLNPYLES 240
              K + + G ++ +      V+   F   V +               +V++      ES
Sbjct: 254 NLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVR----LSES 309

Query: 241 GKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 278
           GK+KP I      P   + +AF+ ++  +  G+ VI P
Sbjct: 310 GKIKPYIIK---VPLDDINKAFTNLDEGRVDGRQVITP 344

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
            KA L  ++     +   E V +P+ + ++VLI++  A +   D +  +G        LP
Sbjct: 4   SKAALLKKFSEPLSI---EDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLP 60

Query: 144 TVPG 147
            + G
Sbjct: 61  IILG 64

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 22/156 (14%), Positives = 40/156 (25%), Gaps = 30/156 (19%)

Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPE---KFDVVYDAIGQ----CDRAVKAI 202
           +A       +E             + + ++ L +   KFDV+ DA G         +  +
Sbjct: 209 MANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGADVNILGNVIPLL 268

Query: 203 KEGGTVVALTGAVTPPGFRFVVTSNGEVLKK---------LNPY--------LESGKVKP 245
              G +  L G  T         +  E++                       L S K   
Sbjct: 269 GRNGVLG-LFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHFQQAVVHLASWKTLY 327

Query: 246 IIDPK----GPFPFSQVVEAFSYIETNKATG-KVVI 276
               K         +   E    +   +    K+ I
Sbjct: 328 PKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRI 363

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 24/141 (17%), Positives = 47/141 (33%), Gaps = 25/141 (17%)

Query: 159 LEFLKSLGADLAIDYTKDNFEDLPEK-----FDVVYDAIGQ---CDRAVKAIKEGGTVVA 210
           L   + +GAD A+       + + E         V+D +G     D A + +   G +  
Sbjct: 209 LALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISV 268

Query: 211 L---TGAVTPPGFRFVVTSNGEV----------LKKLNPYLESGKVKPIIDPKGPFPFSQ 257
           +    GA    GF  +      V          L ++     +G++    +    F   +
Sbjct: 269 VGIHAGAHAKVGFFMIPFG-ASVVTPYWGTRSELMEVVALARAGRLDIHTE---TFTLDE 324

Query: 258 VVEAFSYIETNKATGKVVIHP 278
              A+  +      G+ V+ P
Sbjct: 325 GPAAYRRLREGSIRGRGVVVP 345

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 48.8 bits (116), Expect = 8e-07
 Identities = 26/128 (20%), Positives = 39/128 (30%), Gaps = 18/128 (14%)

Query: 89  YGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGY 148
             +  G   L  D  +  P    D+VLI++ A+ LNP D     G               
Sbjct: 11  RIKSSGELELSLDS-IDTPHPGPDEVLIRIEASPLNPSDLGLLFGA-------------A 56

Query: 149 DVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRA---VKAIKEG 205
           D+ +T+          + A +     +     L     V  +  G    A     A    
Sbjct: 57  DM-STAKASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALM 115

Query: 206 GTVVALTG 213
           G  VA  G
Sbjct: 116 GKTVAAIG 123

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 43.0 bits (101), Expect = 6e-05
 Identities = 21/181 (11%), Positives = 43/181 (23%), Gaps = 52/181 (28%)

Query: 147 GYDVAATSSTRN-LEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG------ 193
           G  +      +   + LK+ GA    +     F              + +DA G      
Sbjct: 196 GIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEALVSTGATIAFDATGGGKLGG 255

Query: 194 QCDRAVKA-------------IKEGGTVV---ALTGAVTP--PGFRFVVTSNG------- 228
           Q    ++A                   V     L  + T     F       G       
Sbjct: 256 QILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFNRNFGMAWGMGGWLLFPFL 315

Query: 229 ---------EVLKKLNPYLESGKVKPIIDPKGPFPFSQVV--EAFSYIETNKATGKVVIH 277
                     + +++   L           +     ++V+  +  +         K +I+
Sbjct: 316 QKIGRERANALKQRVVAEL-KTTFASHYSKE--ISLAEVLDLDMIAVYNKRATGEKYLIN 372

Query: 278 P 278
           P
Sbjct: 373 P 373

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 37/157 (23%)

Query: 147 GYDVAA-TSSTRNLEFLKSLGADLAIDYTK-DNFEDLPEK---FDVVYD------AIGQC 195
           G +V A       LE  K LGADL ++  K D  + + EK               A    
Sbjct: 188 GLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQS- 246

Query: 196 DRAVKAIKEGGTVVAL---TGAVTPPGFRFVVTS-------NG------EVLKKLNPYLE 239
             A  +I+ GG  V +      +  P F  V+          G      E L+    +  
Sbjct: 247 --AYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQ----FAA 300

Query: 240 SGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
            GKVK II+     P  ++ E F  +   +  G+VV+
Sbjct: 301 EGKVKTIIE---VQPLEKINEVFDRMLKGQINGRVVL 334

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 34/157 (21%), Positives = 52/157 (33%), Gaps = 37/157 (23%)

Query: 147 GYDVAA-TSSTRNLEFLKSLGADLAIDYTK-DNFEDLPEK---FDVVYD------AIGQC 195
           G  VAA       L   + LGA++A++    D    L ++      V        A  Q 
Sbjct: 190 GLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQ- 248

Query: 196 DRAVKAIKEGGTVVAL---TGAVTPPGFRFVVTS-------NG------EVLKKLNPYLE 239
             A+  ++ GGT+       G    P F  V+          G      E L     +  
Sbjct: 249 --AIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLD----FAA 302

Query: 240 SGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
            G VK  +          V + F  +   K  G+VV+
Sbjct: 303 HGDVKATVS---TAKLDDVNDVFGRLREGKVEGRVVL 336

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 43.2 bits (102), Expect = 7e-05
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 228 GEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPIP 280
           GE+L +L    E   ++P+  P   +   Q  EA  ++   +  GK+V+   P
Sbjct: 475 GEMLHELVELFEGRVLEPL--PVTAWDVRQAPEALRHLSQARHVGKLVLTMPP 525

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	280
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	99.96
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	99.96
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	99.96
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	99.95
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	99.95
4eye_A	342	Probable oxidoreductase; structural genomics, niai	99.95
3gms_A	340	Putative NADPH:quinone reductase; structural genom	99.95
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	99.95
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	99.95
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	99.95
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	99.95
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	99.94
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	99.94
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	99.94
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	99.94
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	99.94
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	99.93
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	99.93
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	99.93
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	99.93
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	99.93
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	99.93
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	99.93
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	99.93
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	99.93
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	99.92
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	99.92
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	99.92
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	99.92
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	99.92
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	99.92
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	99.92
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	99.92
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	99.92
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	99.92
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	99.92
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	99.91
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	99.91
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	99.91
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	99.91
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	99.91
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	99.91
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	99.91
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	99.91
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	99.91
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	99.91
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	99.9
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	99.9
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	99.9
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	99.9
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	99.9
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	99.9
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	99.9
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	99.89
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	99.89
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	99.89
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	99.89
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	99.89
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	99.89
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	99.88
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.86
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	99.86
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	99.86
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	99.85
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	99.85
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	99.85
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	99.84
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	99.81
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	99.78
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.57
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.36
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	93.88
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	90.77
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	88.85
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	87.97
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	87.94
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	81.71

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=99.96  E-value=3e-28  Score=220.90  Aligned_cols=188  Identities=20%  Similarity=0.201  Sum_probs=159.5

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++...+ +..++++ |.|.|+|++|||||||.|+|||++|++++.|.++   ..+|.++|||+             
T Consensus         1 MKA~v~~~~~-~~~~~l~-e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~---~~~p~i~GhE~aG~V~~vG~~V~~   75 (348)
T 4eez_A            1 MKAAVVRHNP-DGYADLV-EKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG---NKAGTVLGHEGIGIVKEIGADVSS   75 (348)
T ss_dssp             CEEEEECSSC-CSSEEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC---CCTTCBCCSEEEEEEEEECTTCCS
T ss_pred             CeEEEEEcCC-CCcEEEE-EeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC---CCCCcccceeEEEEEEEECceeee
Confidence            8999986533 2458999 9999999999999999999999999999999885   46899999999             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        76 ~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~  155 (348)
T 4eez_A           76 LQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKA  155 (348)
T ss_dssp             CCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             cccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEee
Confidence                                                                                            


Q ss_pred             -------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC------CCccE
Q 023571          151 -------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------EKFDV  187 (280)
Q Consensus       151 -------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------~g~Dv  187 (280)
                                                           +++.+++|+++++++|++++|||+++++.+.+      .++|+
T Consensus       156 l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~  235 (348)
T 4eez_A          156 IKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQS  235 (348)
T ss_dssp             HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEE
T ss_pred             ecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceE
Confidence                                                 56778999999999999999999998876642      58999


Q ss_pred             EEeCCC---CHHHHHhccccCCEEEEEcCCCCCCc------------eEEEEeecHHHHHHHHHHHHCCCceeecCCCcc
Q 023571          188 VYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPG------------FRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGP  252 (280)
Q Consensus       188 V~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~------------~~~~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~  252 (280)
                      ++||+|   .+..++++++++|+++.+|.......            +.......+++++++++++++|++++.+   ++
T Consensus       236 ~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i~p~~---~~  312 (348)
T 4eez_A          236 AIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVKPIV---AT  312 (348)
T ss_dssp             EEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSCCCCE---EE
T ss_pred             EEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCCEEEE---EE
Confidence            999987   48899999999999999987653221            1122334578899999999999999754   38


Q ss_pred             cchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          253 FPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       253 ~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      |+|+|+++|++.+++++..||+||+++
T Consensus       313 ~~l~~~~~A~~~l~~g~~~GKvVl~~s  339 (348)
T 4eez_A          313 RKLEEINDIIDEMKAGKIEGRMVIDFT  339 (348)
T ss_dssp             ECGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             EeHHHHHHHHHHHHCCCCccEEEEEcc
Confidence            999999999999999999999999885

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=99.96  E-value=3.8e-28  Score=218.29  Aligned_cols=195  Identities=33%  Similarity=0.480  Sum_probs=166.2

Q ss_pred             cceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCC--CC-CCCCCCcccCceE--------
Q 023571           82 SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF--KA-TDSPLPTVPGYDV--------  150 (280)
Q Consensus        82 ~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~--~~-~~~~~P~i~G~e~--------  150 (280)
                      .+|||+++.++|.++.++++ +.|.|+|++|||||||.++|||++|++++.|..  +. ....+|.++|||+        
T Consensus         5 ~~Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG   83 (321)
T 3tqh_A            5 KEMKAIQFDQFGPPKVLKLV-DTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELG   83 (321)
T ss_dssp             CEEEEEEESSSCSGGGEEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEEC
T ss_pred             ccceEEEEccCCCcceeEEE-ecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeC
Confidence            46999999999988889999 999999999999999999999999999999831  10 1346789999999        


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        84 ~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~Ga~G  163 (321)
T 3tqh_A           84 SDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAG  163 (321)
T ss_dssp             TTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEESSTTS
T ss_pred             CCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence                                                                                            


Q ss_pred             -----------------EEecChhhHHHHHhCCCCEEEeCCCCC-ccccCCCccEEEeCCC--CHHHHHhccccCCEEEE
Q 023571          151 -----------------AATSSTRNLEFLKSLGADLAIDYTKDN-FEDLPEKFDVVYDAIG--QCDRAVKAIKEGGTVVA  210 (280)
Q Consensus       151 -----------------~~~~s~~~~~~l~~lga~~vid~~~~~-~~~~~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~  210 (280)
                                       +++.+++++++++++|+++++|+++++ +.+..+++|+||||+|  .+..++++|+++|+++.
T Consensus       164 ~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~~~~~~~~~~l~~~G~iv~  243 (321)
T 3tqh_A          164 GVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQSIDCLKETGCIVS  243 (321)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCHHHHHHHGGGEEEEEEEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCcHHHHHHHHhccCCCEEEE
Confidence                             555678889999999999999999988 8888899999999999  57899999999999999


Q ss_pred             EcCCCCCC--------ceEE---EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          211 LTGAVTPP--------GFRF---VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       211 ~g~~~~~~--------~~~~---~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      +|......        .+.+   ......+.++++++++++|++++.+.  ++|+|+++.+|++.+++++..||+||++.
T Consensus       244 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~--~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          244 VPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIEIS--RIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEECCCCCCCHHHHHHHHHHHHTTSSCCCEE--EEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             eCCCCchhhhhhhhhcceEEEEEecCCCHHHHHHHHHHHHCCCcccccc--cEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            98755211        1111   12345789999999999999998765  49999999999999999999999999874

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=99.96  E-value=6.7e-28  Score=219.53  Aligned_cols=204  Identities=25%  Similarity=0.433  Sum_probs=166.9

Q ss_pred             ccCCCCCCCcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE
Q 023571           71 EAEPTKVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV  150 (280)
Q Consensus        71 ~~~~~~~~~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~  150 (280)
                      .+..-...++|.+|||+++.++|+++.++++ +.|.|+|++|||+|||.++|||++|++.+.|.++ ....+|.++|||+
T Consensus        16 ~~~~~~~~~~p~~MkA~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~p~i~G~E~   93 (353)
T 4dup_A           16 ENLYFQSMSLPQEMRFVDLKSFGGPDVMVIG-KRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYP-PPKDASPILGLEL   93 (353)
T ss_dssp             -------CCCCSSEEEEEESSSSSGGGEEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSC-CCTTSCSSSCCEE
T ss_pred             ceeeeecCCCChheeEEEEccCCCccceEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC-CCCCCCCcccccc
Confidence            3333344568999999999999988889999 9999999999999999999999999999999886 2446799999999


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        94 ~G~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV  173 (353)
T 4dup_A           94 SGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLI  173 (353)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred             EEEEEEECCCCCCCCCCCEEEEecCCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEE
Confidence                                                                                            


Q ss_pred             -----------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEEeCCC--CHHHHHh
Q 023571          151 -----------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG--QCDRAVK  200 (280)
Q Consensus       151 -----------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g--~~~~~l~  200 (280)
                                             +++.+++++++++++|++.++|++++++.+.     .+++|+||||+|  .+..+++
T Consensus       174 ~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~  253 (353)
T 4dup_A          174 HGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAAYFERNIA  253 (353)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCGGGHHHHHH
T ss_pred             EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCHHHHHHHHH
Confidence                                   5667899999999999999999998887654     358999999999  6899999


Q ss_pred             ccccCCEEEEEcCCCCCCc--eE----------EEEee----c--------HHHHHHHHHHHHCCCceeecCCCcccchh
Q 023571          201 AIKEGGTVVALTGAVTPPG--FR----------FVVTS----N--------GEVLKKLNPYLESGKVKPIIDPKGPFPFS  256 (280)
Q Consensus       201 ~l~~gG~vV~~g~~~~~~~--~~----------~~~~~----~--------~~~l~~l~~ll~~G~l~~~~~~~~~~~l~  256 (280)
                      +|+++|+++.+|.......  ++          +....    .        .+.++++++++++|++++.+.  ++|+|+
T Consensus       254 ~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~--~~~~l~  331 (353)
T 4dup_A          254 SLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIH--KVFAFE  331 (353)
T ss_dssp             TEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEE--EEEEGG
T ss_pred             HhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcc--eEEeHH
Confidence            9999999999987653321  11          11100    0        123788999999999998776  499999


Q ss_pred             hHHHHHHHHHhCCCCeeEEEEe
Q 023571          257 QVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       257 ~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      ++.+|++.+++++..||+||++
T Consensus       332 ~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          332 DVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             GHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHHHHhCCCCceEEEeC
Confidence            9999999999999999999975

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=99.95  E-value=1.3e-27  Score=215.91  Aligned_cols=196  Identities=26%  Similarity=0.400  Sum_probs=165.9

Q ss_pred             CcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE--------
Q 023571           79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV--------  150 (280)
Q Consensus        79 ~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~--------  150 (280)
                      ++|.+|||+++.++++++.++++ +.+.|+|++|||||||+++|||++|++++.|.++   ..+|.++|||+        
T Consensus         4 ~~p~~mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---~~~P~i~G~e~~G~V~~vG   79 (334)
T 3qwb_A            4 TIPEQQKVILIDEIGGYDVIKYE-DYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP---CEKPYVLGREASGTVVAKG   79 (334)
T ss_dssp             -CCSEEEEEEESSSSSGGGEEEE-EEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC---CCSSEECCSEEEEEEEEEC
T ss_pred             CCchheEEEEEecCCCCceeEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC---CCCCCccccceEEEEEEEC
Confidence            47889999999999988889999 9999999999999999999999999999999875   46899999999        


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        80 ~~v~~~~~GdrV~~~~~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g  159 (334)
T 3qwb_A           80 KGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAG  159 (334)
T ss_dssp             TTCCSCCTTCEEEEECSSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTB
T ss_pred             CCCCCCCCCCEEEEeeCCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCC
Confidence                                                                                            


Q ss_pred             ------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhcccc
Q 023571          151 ------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKE  204 (280)
Q Consensus       151 ------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~  204 (280)
                                        +++.+++++++++++|+++++|++++++.+.      .+++|+||||+|  .++.++++|++
T Consensus       160 ~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~  239 (334)
T 3qwb_A          160 GVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKR  239 (334)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGGGGHHHHHHHEEE
T ss_pred             HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhcc
Confidence                              5667789999999999999999998887653      258999999999  68999999999


Q ss_pred             CCEEEEEcCCCCCC-----------ceEEEE------eec----HHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHH
Q 023571          205 GGTVVALTGAVTPP-----------GFRFVV------TSN----GEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFS  263 (280)
Q Consensus       205 gG~vV~~g~~~~~~-----------~~~~~~------~~~----~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~  263 (280)
                      +|+++.+|......           .+.+..      ...    .+.++++++++++|++++.+.  ++|+|+++++|++
T Consensus       240 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~--~~~~l~~~~~A~~  317 (334)
T 3qwb_A          240 KGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIY--KTYPLRDYRTAAA  317 (334)
T ss_dssp             EEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCCEE--EEEEGGGHHHHHH
T ss_pred             CCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCcee--eEEcHHHHHHHHH
Confidence            99999998764221           111110      011    245689999999999998765  4999999999999


Q ss_pred             HHHhCCCCeeEEEEeCC
Q 023571          264 YIETNKATGKVVIHPIP  280 (280)
Q Consensus       264 ~l~~~~~~gkvVv~~~~  280 (280)
                      .+++++..||+||++.+
T Consensus       318 ~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          318 DIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             HHHTTCCCBEEEEECCC
T ss_pred             HHHhCCCceEEEEecCC
Confidence            99999999999999853

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=99.95  E-value=6.4e-28  Score=218.60  Aligned_cols=188  Identities=18%  Similarity=0.180  Sum_probs=157.2

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCC-CCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQ-VKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~-~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~------------  150 (280)
                      |||++++.+|.   ++++ |.|.|+ +++|||||||+|+|||++|++.+.|..+   ..+|.++|||+            
T Consensus         1 MkAvv~~~~g~---l~v~-e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~---~~~P~i~G~E~~G~V~~vG~~V~   73 (346)
T 4a2c_A            1 MKSVVNDTDGI---VRVA-ESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA---HYYPITLGHEFSGYIDAVGSGVD   73 (346)
T ss_dssp             CEEEEECSSSC---EEEE-ECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS---SSSSBCCCCEEEEEEEEECTTCC
T ss_pred             CCEEEEecCCC---EEEE-EEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC---CCCCccccEEEEEEEEEECCCcc
Confidence            89999988763   8999 999998 5799999999999999999999988764   46899999999            


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        74 ~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~~~~~~  153 (346)
T 4a2c_A           74 DLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAF  153 (346)
T ss_dssp             SCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHHHHHHHHHHH
T ss_pred             cccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhchHHHHHHHHH
Confidence                                                                                            


Q ss_pred             ------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEE
Q 023571          151 ------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVV  188 (280)
Q Consensus       151 ------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV  188 (280)
                                                          +++.+++|+++++++|++++||+++.++.+.      .+++|+|
T Consensus       154 ~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v  233 (346)
T 4a2c_A          154 HLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLI  233 (346)
T ss_dssp             HHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEE
T ss_pred             HHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcccc
Confidence                                                5567889999999999999999999886543      3689999


Q ss_pred             EeCCC---CHHHHHhccccCCEEEEEcCCCCCCce-------------EEEE-------eecHHHHHHHHHHHHCCCcee
Q 023571          189 YDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF-------------RFVV-------TSNGEVLKKLNPYLESGKVKP  245 (280)
Q Consensus       189 ~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~-------------~~~~-------~~~~~~l~~l~~ll~~G~l~~  245 (280)
                      |||+|   .++.++++++++|+++.+|.......+             .+..       ...+++++++.+++++|+++.
T Consensus       234 ~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~l~~  313 (346)
T 4a2c_A          234 LETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSL  313 (346)
T ss_dssp             EECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTCSCC
T ss_pred             cccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcCCCCC
Confidence            99998   478999999999999999887643211             1111       112478999999999999875


Q ss_pred             ecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          246 IIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       246 ~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      ....+++|+|+|+++|++.+++++..||+||.+
T Consensus       314 ~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          314 EPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             GGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             CccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            443346899999999999999999999999863

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=99.95  E-value=1.9e-27  Score=215.61  Aligned_cols=196  Identities=26%  Similarity=0.384  Sum_probs=160.7

Q ss_pred             CCCcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE------
Q 023571           77 VGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV------  150 (280)
Q Consensus        77 ~~~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~------  150 (280)
                      ...+|.+|||+++..++.++.++++ +.|.|+|++|||||||.++|||++|++++.|.++ ....+|.++|||+      
T Consensus        15 ~~~~p~~MkA~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~p~v~G~E~~G~V~~   92 (342)
T 4eye_A           15 QTQGPGSMKAIQAQSLSGPEGLVYT-DVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQ-LKMEPPFVPGIETAGVVRS   92 (342)
T ss_dssp             ---CCCEEEEEEECSSSGGGGEEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSS-SCCCSSBCCCSEEEEEEEE
T ss_pred             cccCCcceEEEEEecCCCCceeEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC-CCCCCCCccceeEEEEEEE
Confidence            4568999999999999888889999 9999999999999999999999999999999875 3457899999999      


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        93 vG~~v~~~vGDrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~i  172 (342)
T 4eye_A           93 APEGSGIKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGI  172 (342)
T ss_dssp             CCTTSSCCTTCEEEEECSSCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHH
T ss_pred             ECCCCCCCCCCEEEEecCCCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHH
Confidence                                                                                            


Q ss_pred             ----------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC------CCccEEEeCCC--CHHHHHhccccCC
Q 023571          151 ----------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------EKFDVVYDAIG--QCDRAVKAIKEGG  206 (280)
Q Consensus       151 ----------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------~g~DvV~d~~g--~~~~~l~~l~~gG  206 (280)
                                      +++.+++++++++++|++.++|++ +++.+.+      +++|+||||+|  .+..++++|+++|
T Consensus       173 G~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G  251 (342)
T 4eye_A          173 GTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEG  251 (342)
T ss_dssp             HHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC--CHHHHHHTEEEEE
T ss_pred             HHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCchhHHHHHHHhhcCCC
Confidence                            566779999999999999999998 6665532      47999999999  6899999999999


Q ss_pred             EEEEEcCCCCC-C----------ceEEEEee-----------cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHH
Q 023571          207 TVVALTGAVTP-P----------GFRFVVTS-----------NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSY  264 (280)
Q Consensus       207 ~vV~~g~~~~~-~----------~~~~~~~~-----------~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~  264 (280)
                      +++.+|..... .          .+.+....           ..+.++++.+++++| +++.+.  ++|+|+++.+|++.
T Consensus       252 ~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~i~--~~~~l~~~~~A~~~  328 (342)
T 4eye_A          252 RLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPVS--ARIPLSEGRQALQD  328 (342)
T ss_dssp             EEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCCEE--EEEEGGGHHHHHHH
T ss_pred             EEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCCcc--eEEeHHHHHHHHHH
Confidence            99999865421 0          11111111           125689999999999 888776  48999999999999


Q ss_pred             HHhCCCCeeEEEEe
Q 023571          265 IETNKATGKVVIHP  278 (280)
Q Consensus       265 l~~~~~~gkvVv~~  278 (280)
                      +.+++..||+||++
T Consensus       329 ~~~~~~~gKvvl~P  342 (342)
T 4eye_A          329 FADGKVYGKMVLVP  342 (342)
T ss_dssp             HHTTCCCSEEEEEC
T ss_pred             HHhCCCCceEEEeC
Confidence            99999999999974

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=99.95  E-value=2.3e-27  Score=214.78  Aligned_cols=197  Identities=20%  Similarity=0.345  Sum_probs=163.6

Q ss_pred             cccceeEEEEcccCCC-ccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE--------
Q 023571           80 VPSEMKAWLYGEYGGV-DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV--------  150 (280)
Q Consensus        80 ~p~~mka~~~~~~g~~-~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~--------  150 (280)
                      |+.+|||+++.++|++ +.++++ +.|.|+|++|||+|||+++|||++|++.+.|.++. ...+|.++|||+        
T Consensus         1 M~~~mka~~~~~~g~p~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~i~G~E~~G~V~~vG   78 (340)
T 3gms_A            1 MSLHGKLIQFHKFGNPKDVLQVE-YKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAH-RIPLPNIPGYEGVGIVENVG   78 (340)
T ss_dssp             -CCEEEEEEESSCSCHHHHEEEE-EEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTT-TSCSSBCCCSCCEEEEEEEC
T ss_pred             CCcccEEEEEecCCCchheEEEE-ecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCC-CCCCCCcCCcceEEEEEEeC
Confidence            3457999999999987 779999 99999999999999999999999999999998762 357899999999        


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG  158 (340)
T 3gms_A           79 AFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIG  158 (340)
T ss_dssp             TTSCGGGTTCEEEECSSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHH
T ss_pred             CCCCCCCCCCEEEecCCCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHH
Confidence                                                                                            


Q ss_pred             ---------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC------CCccEEEeCCC--CHHHHHhccccCCE
Q 023571          151 ---------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------EKFDVVYDAIG--QCDRAVKAIKEGGT  207 (280)
Q Consensus       151 ---------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------~g~DvV~d~~g--~~~~~l~~l~~gG~  207 (280)
                                     +++.+++++++++++|+++++|+.++++.+.+      +++|+||||+|  ....++++|+++|+
T Consensus       159 ~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~  238 (340)
T 3gms_A          159 HLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGH  238 (340)
T ss_dssp             HHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCHHHHHHHHHTEEEEEE
T ss_pred             HHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCChhHHHHHHHhcCCCE
Confidence                           56678999999999999999999988876532      48999999999  46778899999999


Q ss_pred             EEEEcCCCCC----------CceEEEEe------------ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHH
Q 023571          208 VVALTGAVTP----------PGFRFVVT------------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYI  265 (280)
Q Consensus       208 vV~~g~~~~~----------~~~~~~~~------------~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l  265 (280)
                      ++.+|.....          ..+.+...            ...+.++++++++++|++++.. .+++|+|+++.+|++.+
T Consensus       239 iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~-i~~~~~l~~~~~A~~~~  317 (340)
T 3gms_A          239 FLTIGLLSGIQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHSTYELADVKAAVDVV  317 (340)
T ss_dssp             EEECCCTTSCCCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC-EEEEEEGGGHHHHHHHH
T ss_pred             EEEEeecCCCCCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCcccc-ccEEEeHHHHHHHHHHH
Confidence            9999876531          12222111            1246889999999999998743 23599999999999999


Q ss_pred             HhCCC-CeeEEEEeC
Q 023571          266 ETNKA-TGKVVIHPI  279 (280)
Q Consensus       266 ~~~~~-~gkvVv~~~  279 (280)
                      ++++. .||+||++.
T Consensus       318 ~~~~~~~GKvvl~~~  332 (340)
T 3gms_A          318 QSAEKTKGKVFLTSY  332 (340)
T ss_dssp             HCTTCCSSEEEEECC
T ss_pred             HhcCCCCCeEEEEEe
Confidence            99984 599999874

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=99.95  E-value=2.7e-27  Score=216.34  Aligned_cols=194  Identities=23%  Similarity=0.327  Sum_probs=161.0

Q ss_pred             CcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE--------
Q 023571           79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV--------  150 (280)
Q Consensus        79 ~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~--------  150 (280)
                      .||.+|||+++.++ +++.++++ +.|.|+|++|||||||.++|||++|++++.|.++. ...+|.++|||+        
T Consensus        23 ~m~~~mkA~~~~~~-~~~~l~~~-e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~P~v~GhE~~G~V~~vG   99 (363)
T 3uog_A           23 MMSKWMQEWSTETV-APHDLKLA-ERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGL-DLAFPFVPASDMSGVVEAVG   99 (363)
T ss_dssp             CCCSEEEEEEBSCT-TTTCCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTC-CCCSSBCCCCEEEEEEEEEC
T ss_pred             cCchhhEEEEEccC-CCCCcEEE-eeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCCcCcccceEEEEEEEC
Confidence            47889999999987 44569999 99999999999999999999999999999987752 345677777765        


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus       100 ~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  179 (363)
T 3uog_A          100 KSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWF  179 (363)
T ss_dssp             TTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHH
T ss_pred             CCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHH
Confidence                                                                                            


Q ss_pred             --------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC------CCcc
Q 023571          151 --------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------EKFD  186 (280)
Q Consensus       151 --------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------~g~D  186 (280)
                                                            +++.+++++++++++|+++++|+..+++.+.+      +++|
T Consensus       180 al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D  259 (363)
T 3uog_A          180 ALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGAD  259 (363)
T ss_dssp             HHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEE
T ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCce
Confidence                                                  66678899999999999999996656765532      4899


Q ss_pred             EEEeCCC--CHHHHHhccccCCEEEEEcCCCCC-Cc----------eEE--EEeecHHHHHHHHHHHHCCCceeecCCCc
Q 023571          187 VVYDAIG--QCDRAVKAIKEGGTVVALTGAVTP-PG----------FRF--VVTSNGEVLKKLNPYLESGKVKPIIDPKG  251 (280)
Q Consensus       187 vV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~~-~~----------~~~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~  251 (280)
                      +||||+|  .+..++++|+++|+++.+|..... ..          +.+  ......+.++++++++++|++++.+.  +
T Consensus       260 ~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~--~  337 (363)
T 3uog_A          260 HILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLGLKPVID--M  337 (363)
T ss_dssp             EEEEETTSSCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHHHHHHHHHHHHTCCCCEE--E
T ss_pred             EEEECCChHHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHHHHHHHHHHcCCCcccee--e
Confidence            9999998  689999999999999999876532 11          111  12235789999999999999988776  4


Q ss_pred             ccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          252 PFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       252 ~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      +|+|+++.+|++.+++++ .||+||++
T Consensus       338 ~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          338 RYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             EEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             EEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            899999999999999999 89999975

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=99.95  E-value=1.1e-26  Score=210.36  Aligned_cols=191  Identities=23%  Similarity=0.307  Sum_probs=163.0

Q ss_pred             ceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE------------
Q 023571           83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV------------  150 (280)
Q Consensus        83 ~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~------------  150 (280)
                      +|||+++.+++.+  ++++ +.|.|+|++|||||||+++|||++|++.+.|.++ ....+|.++|||+            
T Consensus         2 ~MkA~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~P~v~G~E~~G~V~~vG~~v~   77 (340)
T 3s2e_A            2 MMKAAVVRAFGAP--LTID-EVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWP-VKPTLPFIPGHEGVGYVSAVGSGVS   77 (340)
T ss_dssp             EEEEEEBCSTTSC--CEEE-EEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSS-SCCCSSBCCCSEEEEEEEEECSSCC
T ss_pred             ceEEEEEecCCCC--CEEE-EccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCC-CCCCCCcccCCcceEEEEEECCCCC
Confidence            5999999988766  8888 9999999999999999999999999999999876 2356899999998            


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        78 ~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  157 (340)
T 3s2e_A           78 RVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYK  157 (340)
T ss_dssp             SCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHH
T ss_pred             cCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHH
Confidence                                                                                            


Q ss_pred             -------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC----CCccEEE
Q 023571          151 -------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP----EKFDVVY  189 (280)
Q Consensus       151 -------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~----~g~DvV~  189 (280)
                                                           +++.+++++++++++|+++++|++++++.+.+    +++|+||
T Consensus       158 ~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vi  237 (340)
T 3s2e_A          158 GLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVL  237 (340)
T ss_dssp             HHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEE
T ss_pred             HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEE
Confidence                                                 56688999999999999999999998876543    4899999


Q ss_pred             eCCC---CHHHHHhccccCCEEEEEcCCCCCCce------------EEEEeecHHHHHHHHHHHHCCCceeecCCCcccc
Q 023571          190 DAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF------------RFVVTSNGEVLKKLNPYLESGKVKPIIDPKGPFP  254 (280)
Q Consensus       190 d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~------------~~~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~  254 (280)
                      ||+|   .++.++++|+++|+++.+|.......+            ........++++++++++++|++++.+.   .|+
T Consensus       238 d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~---~~~  314 (340)
T 3s2e_A          238 VTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKATVS---TAK  314 (340)
T ss_dssp             ESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCCEE---EEC
T ss_pred             EeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCCceEE---EEe
Confidence            9987   478999999999999999876532211            1122335689999999999999998643   789


Q ss_pred             hhhHHHHHHHHHhCCCCeeEEEEeCC
Q 023571          255 FSQVVEAFSYIETNKATGKVVIHPIP  280 (280)
Q Consensus       255 l~~v~~A~~~l~~~~~~gkvVv~~~~  280 (280)
                      |+++++|++.+++++..||+||++++
T Consensus       315 l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          315 LDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             GGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             HHHHHHHHHHHHcCCCceEEEEecCC
Confidence            99999999999999999999999863

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=99.95  E-value=9.1e-27  Score=209.63  Aligned_cols=190  Identities=24%  Similarity=0.323  Sum_probs=162.1

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++.++|+++.++++ +.+.|+|++|||+|||.++|||++|++++.|.++  ...+|.++|||+             
T Consensus         2 MkA~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~p~v~G~e~~G~V~~vG~~v~~   78 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYV-DFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYP--APFLPSGLGAEGAGVVEAVGDEVTR   78 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEE-EECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC--CSSSSBCCCCCEEEEEEEECTTCCS
T ss_pred             cEEEEEecCCCcceeEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC--CCCCCCCCCceeEEEEEEECCCCCC
Confidence            999999999998889999 9999999999999999999999999999999886  257899999999             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~~GdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~  158 (325)
T 3jyn_A           79 FKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLAC  158 (325)
T ss_dssp             CCTTCEEEESSSSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHH
T ss_pred             CCCCCEEEEecCCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHH
Confidence                                                                                            


Q ss_pred             -----------EEecChhhHHHHHhCCCCEEEeCCCCCccccC------CCccEEEeCCC--CHHHHHhccccCCEEEEE
Q 023571          151 -----------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------EKFDVVYDAIG--QCDRAVKAIKEGGTVVAL  211 (280)
Q Consensus       151 -----------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~  211 (280)
                                 +++.+++++++++++|+++++|+.++++.+.+      +++|+||||+|  .+..++++|+++|+++.+
T Consensus       159 ~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~  238 (325)
T 3jyn_A          159 QWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSF  238 (325)
T ss_dssp             HHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCGGGHHHHHTTEEEEEEEEEC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhcCCCEEEEE
Confidence                       56678999999999999999999988876532      58999999999  689999999999999999


Q ss_pred             cCCCCCC------------ceEEEEe----------ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCC
Q 023571          212 TGAVTPP------------GFRFVVT----------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK  269 (280)
Q Consensus       212 g~~~~~~------------~~~~~~~----------~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~  269 (280)
                      |....+.            .+.+...          ...+.++++++++++|++++.+.  ++|+|+++.+|++.+++++
T Consensus       239 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~--~~~~l~~~~~A~~~~~~~~  316 (325)
T 3jyn_A          239 GNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVDGI--EQYALKDAAKAQIELSARR  316 (325)
T ss_dssp             CCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCCCC--EEEEGGGHHHHHHHHHTTC
T ss_pred             ecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCccc--cEEcHHHHHHHHHHHHcCC
Confidence            8765321            1111110          12345678999999999998754  5999999999999999999


Q ss_pred             CCeeEEEEe
Q 023571          270 ATGKVVIHP  278 (280)
Q Consensus       270 ~~gkvVv~~  278 (280)
                      ..||+||.+
T Consensus       317 ~~Gkvvl~p  325 (325)
T 3jyn_A          317 TTGSTILIP  325 (325)
T ss_dssp             CCSCEEEEC
T ss_pred             CCceEEEeC
Confidence            999999974

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=99.95  E-value=1.2e-26  Score=210.96  Aligned_cols=192  Identities=24%  Similarity=0.370  Sum_probs=154.8

Q ss_pred             cceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-----------
Q 023571           82 SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-----------  150 (280)
Q Consensus        82 ~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-----------  150 (280)
                      ++|||+++.+++.++.++++ +.+.|+|++|||+|||.++|||++|++++.|.++ ....+|.++|||+           
T Consensus         2 m~mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~p~v~G~e~~G~V~~vG~~v   79 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLF-RKAMPEPQDGELKIRVKACGLNFIDLMVRQGNID-NPPKTPLVPGFECSGIVEALGDSV   79 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS-SCCCSSBCCCSEEEEEEEEECTTC
T ss_pred             ceeEEEEEccCCCcceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcC-CCCCCCccccceeEEEEEEeCCCC
Confidence            46999999999988789999 9999999999999999999999999999999875 3457899999999           


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        80 ~~~~~GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a  159 (349)
T 4a27_A           80 KGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAV  159 (349)
T ss_dssp             CSCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHH
T ss_pred             CCCCCCCEEEEecCCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHH
Confidence                                                                                            


Q ss_pred             ------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEEeCCC--CHHHHHhccccCCEEEEE
Q 023571          151 ------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG--QCDRAVKAIKEGGTVVAL  211 (280)
Q Consensus       151 ------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~  211 (280)
                                  +++.+++++++++ +|+++++| .++++.+.     .+++|+||||+|  .++.++++|+++|+++.+
T Consensus       160 ~qla~~~g~~~V~~~~~~~~~~~~~-~ga~~~~~-~~~~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~  237 (349)
T 4a27_A          160 AQLCSTVPNVTVFGTASTFKHEAIK-DSVTHLFD-RNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILY  237 (349)
T ss_dssp             HHHHTTSTTCEEEEEECGGGHHHHG-GGSSEEEE-TTSCHHHHHHHHCTTCEEEEEEECC-------CTTEEEEEEEEEE
T ss_pred             HHHHHHcCCcEEEEeCCHHHHHHHH-cCCcEEEc-CCccHHHHHHHhcCCCceEEEECCCchhHHHHHHHhhcCCEEEEE
Confidence                        4556788899888 99999999 66676553     268999999998  578999999999999999


Q ss_pred             cCCCCCC---------------------------ceEEEEee-------------cHHHHHHHHHHHHCCCceeecCCCc
Q 023571          212 TGAVTPP---------------------------GFRFVVTS-------------NGEVLKKLNPYLESGKVKPIIDPKG  251 (280)
Q Consensus       212 g~~~~~~---------------------------~~~~~~~~-------------~~~~l~~l~~ll~~G~l~~~~~~~~  251 (280)
                      |......                           ...+....             ..+.++++++++++|++++.+.  +
T Consensus       238 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~--~  315 (349)
T 4a27_A          238 GSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVD--S  315 (349)
T ss_dssp             C-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCCCCEE--E
T ss_pred             CCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCcccccc--c
Confidence            8753110                           00011000             1678999999999999998776  4


Q ss_pred             ccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          252 PFPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       252 ~~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      +|+|+++++|++.+++++..||+||+++
T Consensus       316 ~~~l~~~~~A~~~l~~~~~~GKvvi~~~  343 (349)
T 4a27_A          316 LWALEEVKEAMQRIHDRGNIGKLILDVE  343 (349)
T ss_dssp             EECGGGHHHHHHHHHTTCCSSEEEEETT
T ss_pred             eECHHHHHHHHHHHHhCCCCceEEEecC
Confidence            9999999999999999999999999985

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=99.94  E-value=1.5e-26  Score=210.12  Aligned_cols=195  Identities=22%  Similarity=0.295  Sum_probs=157.0

Q ss_pred             CcccceeEEEEc--cc-CCCccEEEeeec---------cCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCccc
Q 023571           79 TVPSEMKAWLYG--EY-GGVDVLKFDEKV---------TVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVP  146 (280)
Q Consensus        79 ~~p~~mka~~~~--~~-g~~~~l~l~~~~---------~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~  146 (280)
                      ++|.+|||+++.  ++ +.++.++++ +.         |.|+|++|||||||+++|||++|++++.|.++ ....+|.++
T Consensus         6 ~~p~~mka~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~~~p~v~   83 (349)
T 3pi7_A            6 TIPSEMKALLLVGDGYTKTPSGSALE-AMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYG-QPRVKGRPA   83 (349)
T ss_dssp             CCCSEEEEEEECSCBSCSSCCCSCCC-CSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSS-SCBCTTSBC
T ss_pred             CCchhheEEEEEccccCCCcccceEE-EeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCC-CCCCCCCCc
Confidence            578999999999  55 345667777 77         99999999999999999999999999999875 245789999


Q ss_pred             CceE----------------------------------------------------------------------------
Q 023571          147 GYDV----------------------------------------------------------------------------  150 (280)
Q Consensus       147 G~e~----------------------------------------------------------------------------  150 (280)
                      |||+                                                                            
T Consensus        84 G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~  163 (349)
T 3pi7_A           84 GFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVKQE  163 (349)
T ss_dssp             CSEEEEEEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHHHHHHHH
T ss_pred             cceEEEEEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHHHHHhhC
Confidence            9999                                                                            


Q ss_pred             ------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC------CCccEEEeCCC-
Q 023571          151 ------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------EKFDVVYDAIG-  193 (280)
Q Consensus       151 ------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------~g~DvV~d~~g-  193 (280)
                                                    +++.+++++++++++|+++++|++++++.+.+      +++|+||||+| 
T Consensus       164 g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~  243 (349)
T 3pi7_A          164 GEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTG  243 (349)
T ss_dssp             CCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCC
Confidence                                          56678999999999999999999988876643      48999999999 


Q ss_pred             -CHHHHHhccccCCEEEEEcCCCC-CCc-----------eEEEEee-----------cHHHHHHHHHHHHCCCceeecCC
Q 023571          194 -QCDRAVKAIKEGGTVVALTGAVT-PPG-----------FRFVVTS-----------NGEVLKKLNPYLESGKVKPIIDP  249 (280)
Q Consensus       194 -~~~~~l~~l~~gG~vV~~g~~~~-~~~-----------~~~~~~~-----------~~~~l~~l~~ll~~G~l~~~~~~  249 (280)
                       .+..++++|+++|+++.+|.... ...           +.+....           ..+.++++++++++|++++.+. 
T Consensus       244 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~-  322 (349)
T 3pi7_A          244 PLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVT-  322 (349)
T ss_dssp             HHHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC-CC-
T ss_pred             hhHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcccccc-
Confidence             57899999999999999986442 111           1111111           1467888999999999987665 


Q ss_pred             CcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          250 KGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       250 ~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                       ++|+|+++.+|++. .+++..||+||++
T Consensus       323 -~~~~l~~~~~A~~~-~~~~~~gKvvl~p  349 (349)
T 3pi7_A          323 -AVVPLAEAIAWVPA-ELTKPNGKVFIRP  349 (349)
T ss_dssp             -EEEEHHHHHHHHHH-HHTSSSSCEEEEC
T ss_pred             -eEEcHHHHHHHHHH-HhCCCCceEEEeC
Confidence             59999999999994 4555679999974

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=99.94  E-value=7.4e-27  Score=209.87  Aligned_cols=191  Identities=19%  Similarity=0.208  Sum_probs=161.6

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++.++|+++.++++ +.|.|+|++|||+|||.++|||++|++.+.|.++ ....+|.++|||+             
T Consensus         1 MkA~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~p~v~G~E~~G~V~~~Gv~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQ-HLEESQLPAGDVTVDVHWSSLNYKDALAITGKGK-IIRHFPMIPGIDFAGTVHASEDPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEE-ECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTT-CCCSSSBCCCSEEEEEEEEESSTTCC
T ss_pred             CceEEEecCCCCceeeEe-ecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCC-CCCCCCccccceeEEEEEEeCCCCCC
Confidence            899999999988889999 9999999999999999999999999999999875 2457899999998             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~  158 (324)
T 3nx4_A           79 AGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGG  158 (324)
T ss_dssp             TTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSH
T ss_pred             CCCEEEEcccccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcH
Confidence                                                                                            


Q ss_pred             -----------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC--CCccEEEeCCC--CHHHHHhccccCCEEE
Q 023571          151 -----------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP--EKFDVVYDAIG--QCDRAVKAIKEGGTVV  209 (280)
Q Consensus       151 -----------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~--~g~DvV~d~~g--~~~~~l~~l~~gG~vV  209 (280)
                                       +++.+++|+++++++|+++++|+++.++....  +++|+||||+|  .++.++++|+++|+++
T Consensus       159 vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv  238 (324)
T 3nx4_A          159 VGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVA  238 (324)
T ss_dssp             HHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEE
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCCcHHHHHHHHHHhcCCEEE
Confidence                             56678999999999999999999876653322  58999999999  6899999999999999


Q ss_pred             EEcCCCCCC-ce----------EEEEe----e----cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCC
Q 023571          210 ALTGAVTPP-GF----------RFVVT----S----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKA  270 (280)
Q Consensus       210 ~~g~~~~~~-~~----------~~~~~----~----~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~  270 (280)
                      .+|...... .+          .+...    .    ..+.++++.+++++|++++. .  ++|+|+++++|++.+++++.
T Consensus       239 ~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~-~--~~~~l~~~~~A~~~~~~~~~  315 (324)
T 3nx4_A          239 ACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQA-A--TEITLADAPKFADAIINNQV  315 (324)
T ss_dssp             ECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHHH-E--EEEEGGGHHHHHHHHHTTCC
T ss_pred             EEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCCC-c--eeEeHHHHHHHHHHHHhCCC
Confidence            998765321 11          11110    0    13678999999999999875 3  59999999999999999999


Q ss_pred             CeeEEEEeC
Q 023571          271 TGKVVIHPI  279 (280)
Q Consensus       271 ~gkvVv~~~  279 (280)
                      .||+||+++
T Consensus       316 ~gkvvv~~~  324 (324)
T 3nx4_A          316 QGRTLVKIK  324 (324)
T ss_dssp             CSEEEEECC
T ss_pred             CceEEEecC
Confidence            999999874

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=99.94  E-value=9.8e-26  Score=206.04  Aligned_cols=196  Identities=23%  Similarity=0.306  Sum_probs=158.9

Q ss_pred             cccceeEEEEccc---CCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE------
Q 023571           80 VPSEMKAWLYGEY---GGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV------  150 (280)
Q Consensus        80 ~p~~mka~~~~~~---g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~------  150 (280)
                      ++.+|||+++.++   ++++.++++ +.|.|+|++|||+|||.++|||++|++++.|.++  ...+|.++|||+      
T Consensus        19 ~m~~MkA~~~~~~~~~~~~~~l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~p~v~G~E~~G~V~~   95 (363)
T 4dvj_A           19 YFQSMKAVGYNKPAPITDDASLLDI-ELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPP--DGTDWKVIGYDAAGIVSA   95 (363)
T ss_dssp             CCCEEEEEEBSSCCCTTSTTSSEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC----CCSBCCCCCEEEEEEE
T ss_pred             hhheeEEEEEeccCCCCCCceEEEe-ecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCC--CCCCCCcccceeEEEEEE
Confidence            3467999999987   556779999 9999999999999999999999999999999875  357899999999      


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        96 vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~V  175 (363)
T 4dvj_A           96 VGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAI  175 (363)
T ss_dssp             ECTTCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEE
T ss_pred             eCCCCCCCCCCCEEEEccCCCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEE
Confidence                                                                                            


Q ss_pred             --------------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEEeCCC---CHH
Q 023571          151 --------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG---QCD  196 (280)
Q Consensus       151 --------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g---~~~  196 (280)
                                                +++.+++++++++++|+++++|+++ ++.+.     .+++|+||||+|   .++
T Consensus       176 lV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~-~~~~~v~~~~~~g~Dvvid~~g~~~~~~  254 (363)
T 4dvj_A          176 LIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSK-PLAAEVAALGLGAPAFVFSTTHTDKHAA  254 (363)
T ss_dssp             EEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTS-CHHHHHHTTCSCCEEEEEECSCHHHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCC-CHHHHHHHhcCCCceEEEECCCchhhHH
Confidence                                      5666788999999999999999975 44332     258999999998   478


Q ss_pred             HHHhccccCCEEEEEcCCCCC-------CceEEEEee--------------cHHHHHHHHHHHHCCCceeecCCC-cccc
Q 023571          197 RAVKAIKEGGTVVALTGAVTP-------PGFRFVVTS--------------NGEVLKKLNPYLESGKVKPIIDPK-GPFP  254 (280)
Q Consensus       197 ~~l~~l~~gG~vV~~g~~~~~-------~~~~~~~~~--------------~~~~l~~l~~ll~~G~l~~~~~~~-~~~~  254 (280)
                      .++++|+++|+++.+|.....       ..+.+....              ..+.++++++++++|++++.+..+ +.|+
T Consensus       255 ~~~~~l~~~G~iv~~g~~~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~  334 (363)
T 4dvj_A          255 EIADLIAPQGRFCLIDDPSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPIN  334 (363)
T ss_dssp             HHHHHSCTTCEEEECSCCSSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCCEEEEECSCS
T ss_pred             HHHHHhcCCCEEEEECCCCccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeeccccceecCCC
Confidence            999999999999999754311       112221110              146789999999999999876541 1459


Q ss_pred             hhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          255 FSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       255 l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      ++++.+|++.+++++..||+||++.
T Consensus       335 l~~~~~A~~~~~~~~~~GKvVl~~~  359 (363)
T 4dvj_A          335 AANLKQAHALVESGTARGKVVIEGF  359 (363)
T ss_dssp             HHHHHHHHHHHHHTCCCSEEEEECS
T ss_pred             HHHHHHHHHHHHhCCCceEEEEeCc
Confidence            9999999999999999999999873

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=99.94  E-value=1.3e-25  Score=203.88  Aligned_cols=190  Identities=22%  Similarity=0.357  Sum_probs=156.7

Q ss_pred             ceeEEEEcccC---CCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE---------
Q 023571           83 EMKAWLYGEYG---GVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV---------  150 (280)
Q Consensus        83 ~mka~~~~~~g---~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~---------  150 (280)
                      +|||+++.++|   .++.+++. +.|.|+|++|||+|||.++|||++|++.+.|..    ..+|.++|||+         
T Consensus         2 ~MkA~~~~~~G~~~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~----~~~p~i~G~e~~G~V~~vG~   76 (346)
T 3fbg_A            2 SLKAIGFEQPFKLSDGNLFKTF-NLDIPEPKVHEILVKIQSISVNPVDTKQRLMDV----SKAPRVLGFDAIGVVESVGN   76 (346)
T ss_dssp             CEEEEEBSSCCCGGGCCCCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHTTSCC----SSSCBCCCCCEEEEEEEECT
T ss_pred             CcEEEEEEeccccCCCceeEec-cccCCCCCCCEEEEEEEEEEcCHHHHHHHhCCC----CCCCcCcCCccEEEEEEeCC
Confidence            69999999987   56779999 999999999999999999999999999998863    36789999999         


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        77 ~v~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV  156 (346)
T 3fbg_A           77 EVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLI  156 (346)
T ss_dssp             TCCSCCTTCEEEECCCTTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEE
T ss_pred             CCCcCCCCCEEEEcCCCCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEE
Confidence                                                                                            


Q ss_pred             -----------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEEeCCC---CHHHHH
Q 023571          151 -----------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG---QCDRAV  199 (280)
Q Consensus       151 -----------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g---~~~~~l  199 (280)
                                             +++.+++++++++++|+++++|+++ ++.+.     .+++|+||||+|   .++.++
T Consensus       157 ~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~  235 (346)
T 3fbg_A          157 INGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKE-SLLNQFKTQGIELVDYVFCTFNTDMYYDDMI  235 (346)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTS-CHHHHHHHHTCCCEEEEEESSCHHHHHHHHH
T ss_pred             EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCc-cHHHHHHHhCCCCccEEEECCCchHHHHHHH
Confidence                                   5666689999999999999999975 44432     258999999999   368999


Q ss_pred             hccccCCEEEEEcCCCCCC--------ceEEEEee--------------cHHHHHHHHHHHHCCCceeecCCCccc---c
Q 023571          200 KAIKEGGTVVALTGAVTPP--------GFRFVVTS--------------NGEVLKKLNPYLESGKVKPIIDPKGPF---P  254 (280)
Q Consensus       200 ~~l~~gG~vV~~g~~~~~~--------~~~~~~~~--------------~~~~l~~l~~ll~~G~l~~~~~~~~~~---~  254 (280)
                      ++|+++|++|.++......        .+.+....              ..+.++++++++++|++++.+..  +|   +
T Consensus       236 ~~l~~~G~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~--~~~~~~  313 (346)
T 3fbg_A          236 QLVKPRGHIATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTK--VIEGLT  313 (346)
T ss_dssp             HHEEEEEEEEESSCCSSCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCCCEEE--EEESCC
T ss_pred             HHhccCCEEEEECCCCCCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEECCccc--eecCCC
Confidence            9999999999987654221        12222110              14678999999999999987653  55   9


Q ss_pred             hhhHHHHHHHHHhCCCCeeEEEEeCC
Q 023571          255 FSQVVEAFSYIETNKATGKVVIHPIP  280 (280)
Q Consensus       255 l~~v~~A~~~l~~~~~~gkvVv~~~~  280 (280)
                      |+++.+|++.+++++..||+||++++
T Consensus       314 l~~~~~A~~~~~~g~~~GKvvl~~~~  339 (346)
T 3fbg_A          314 TENIYQAHQILESNTMIGKLVINLNE  339 (346)
T ss_dssp             HHHHHHHHHHHHTTCCCSEEEEEC--
T ss_pred             HHHHHHHHHHHhcCCcceEEEEecCC
Confidence            99999999999999999999999863

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=99.94  E-value=9.4e-26  Score=204.55  Aligned_cols=193  Identities=32%  Similarity=0.504  Sum_probs=157.0

Q ss_pred             cccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE---------
Q 023571           80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV---------  150 (280)
Q Consensus        80 ~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~---------  150 (280)
                      +|.+|||+++.+++++  ++++ +.|.|+|++|||||||.++|||++|++++.|..+.....+|.++|||+         
T Consensus         4 ~~~~mka~~~~~~~~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~   80 (343)
T 3gaz_A            4 TTPTMIAAVVEEANGP--FVLR-KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGP   80 (343)
T ss_dssp             --CEEEEEEECSTTCC--EEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECT
T ss_pred             CchhheEEEEecCCCc--eEEE-eccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECC
Confidence            4678999999998876  8999 999999999999999999999999999999976422357899999998         


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        81 ~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~  160 (343)
T 3gaz_A           81 EVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGG  160 (343)
T ss_dssp             TCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTT
T ss_pred             CCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCC
Confidence                                                                                            


Q ss_pred             ------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhcccc
Q 023571          151 ------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKE  204 (280)
Q Consensus       151 ------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~  204 (280)
                                        +++.+++++++++++|++. || .++++.+.      .+++|+||||+|  .+..++++|++
T Consensus       161 g~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~lGa~~-i~-~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~  238 (343)
T 3gaz_A          161 GGVGHVAIQIALARGARVFATARGSDLEYVRDLGATP-ID-ASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKR  238 (343)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTSEE-EE-TTSCHHHHHHHHHTTSCEEEEEESSCTHHHHHHHHHEEE
T ss_pred             CHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCCE-ec-cCCCHHHHHHHHhcCCCceEEEECCCcHHHHHHHHHHhc
Confidence                              4448899999999999998 88 66666543      258999999999  58899999999


Q ss_pred             CCEEEEEcCCCCCC-------ceEEEE--e-----------ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHH
Q 023571          205 GGTVVALTGAVTPP-------GFRFVV--T-----------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSY  264 (280)
Q Consensus       205 gG~vV~~g~~~~~~-------~~~~~~--~-----------~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~  264 (280)
                      +|+++.+|......       .+.+..  .           ..++.++++++++++|++++.+.. ++|+|+++.+|++.
T Consensus       239 ~G~iv~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~-~~~~l~~~~~A~~~  317 (343)
T 3gaz_A          239 FGHVVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDP-RTFSIAEIGSAYDA  317 (343)
T ss_dssp             EEEEEESCCCSCCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCCCBCS-CCEETTCHHHHHHH
T ss_pred             CCeEEEEcccCccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcccCccC-cEecHHHHHHHHHH
Confidence            99999998765211       112211  1           023779999999999999987651 48999999999999


Q ss_pred             HHhCCC----CeeEEEEe
Q 023571          265 IETNKA----TGKVVIHP  278 (280)
Q Consensus       265 l~~~~~----~gkvVv~~  278 (280)
                      +++++.    .||+|+++
T Consensus       318 ~~~~~~~Gr~~GK~v~~~  335 (343)
T 3gaz_A          318 VLGRNDVPRQRGKIAITV  335 (343)
T ss_dssp             HHTCTTCCCCSSBCEEEC
T ss_pred             HHcCCCcccccceEEEEe
Confidence            999865    68999986

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=99.93  E-value=1.3e-25  Score=206.18  Aligned_cols=196  Identities=17%  Similarity=0.202  Sum_probs=156.7

Q ss_pred             CCcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------
Q 023571           78 GTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------  150 (280)
Q Consensus        78 ~~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------  150 (280)
                      ..+|.+|||+++..++.+  ++++ +.|.|+|++|||||||+++|||++|++++.|.++  ...+|.++|||+       
T Consensus         3 ~~~~~tmkA~v~~~~~~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~P~v~GhE~~G~V~~v   77 (378)
T 3uko_A            3 QGQVITCKAAVAYEPNKP--LVIE-DVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDP--EGLFPCILGHEAAGIVESV   77 (378)
T ss_dssp             TTSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCT--TCCSSBCCCCEEEEEEEEE
T ss_pred             cccceeeEEEEEecCCCc--cEEE-EecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCC--CCCCCccCCccceEEEEEe
Confidence            457889999999988776  8888 9999999999999999999999999999999864  234455555431       


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        78 G~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  157 (378)
T 3uko_A           78 GEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDV  157 (378)
T ss_dssp             CTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGG
T ss_pred             CCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechh
Confidence                                                                                            


Q ss_pred             -----------------------------------------------------------------EEecChhhHHHHHhC
Q 023571          151 -----------------------------------------------------------------AATSSTRNLEFLKSL  165 (280)
Q Consensus       151 -----------------------------------------------------------------~~~~s~~~~~~l~~l  165 (280)
                                                                                       +++.+++|+++++++
T Consensus       158 ~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l  237 (378)
T 3uko_A          158 SVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF  237 (378)
T ss_dssp             GEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT
T ss_pred             heEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc
Confidence                                                                             455689999999999


Q ss_pred             CCCEEEeCC--CCCcccc-----CCCccEEEeCCC---CHHHHHhccccC-CEEEEEcCCCCCCceE-----------EE
Q 023571          166 GADLAIDYT--KDNFEDL-----PEKFDVVYDAIG---QCDRAVKAIKEG-GTVVALTGAVTPPGFR-----------FV  223 (280)
Q Consensus       166 ga~~vid~~--~~~~~~~-----~~g~DvV~d~~g---~~~~~l~~l~~g-G~vV~~g~~~~~~~~~-----------~~  223 (280)
                      |++++||++  ++++.+.     .+++|+||||+|   .++.++++|+++ |+++.+|.......+.           +.
T Consensus       238 Ga~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~  317 (378)
T 3uko_A          238 GVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWK  317 (378)
T ss_dssp             TCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEE
T ss_pred             CCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhcCcEEE
Confidence            999999998  4555543     248999999999   378999999996 9999999765222211           11


Q ss_pred             Ee-----ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          224 VT-----SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       224 ~~-----~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      ..     ...+.+.++++++++|++++....+++|+|+++++|++.+++++.. |+||+++
T Consensus       318 g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~~  377 (378)
T 3uko_A          318 GTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDTS  377 (378)
T ss_dssp             ECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEETT
T ss_pred             EEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEecC
Confidence            11     1357899999999999998654444699999999999999988875 9999876

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=99.93  E-value=6.3e-25  Score=200.54  Aligned_cols=199  Identities=22%  Similarity=0.301  Sum_probs=162.6

Q ss_pred             CcccceeEEEEcccCCC--ccEEE-eeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-----
Q 023571           79 TVPSEMKAWLYGEYGGV--DVLKF-DEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-----  150 (280)
Q Consensus        79 ~~p~~mka~~~~~~g~~--~~l~l-~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-----  150 (280)
                      .+|.+|||+++.+++.+  +.+++ + +.|.|+|++|||+|||.++|||++|++++.|.++. ...+|.++|||+     
T Consensus        19 ~~~~~MkA~~~~~~g~~~~~~l~~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~P~i~G~E~~G~V~   96 (362)
T 2c0c_A           19 YFQSMMQKLVVTRLSPNFREAVTLSR-DCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDP-SVKPPFDIGFEGIGEVV   96 (362)
T ss_dssp             HHCCEEEEEEECSCCSSHHHHEEEEE-EEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCT-TCCSCEECCSEEEEEEE
T ss_pred             cchhhceEEEEeecCCCccceeEEEe-ecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCC-CCCCCCCCCceeEEEEE
Confidence            46778999999988753  56889 8 99999999999999999999999999999997742 346789999999     


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        97 ~vG~~V~~~~~vGdrV~~~~~G~~aey~~v~~~~~~~~P~~~~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~i  176 (362)
T 2c0c_A           97 ALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGT  176 (362)
T ss_dssp             EECTTGGGTCCTTCEEEEECSCCSBSEEEEEGGGCEECSSSCHHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTT
T ss_pred             EECCCccCCCCCCCEEEEccCCcceeEEEEcHHHeEECCCCchHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHH
Confidence                                                                                            


Q ss_pred             ----------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEEeCCC--CHHHHHhccccCCE
Q 023571          151 ----------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG--QCDRAVKAIKEGGT  207 (280)
Q Consensus       151 ----------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g--~~~~~l~~l~~gG~  207 (280)
                                      +++.+++++++++++|++.++|++++++.+.     .+++|+||||+|  .++.++++|+++|+
T Consensus       177 G~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~  256 (362)
T 2c0c_A          177 GQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGR  256 (362)
T ss_dssp             HHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCTHHHHHHHHHEEEEEE
T ss_pred             HHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCHHHHHHHHHHHhcCCE
Confidence                            5667788999999999999999988776543     257999999999  57899999999999


Q ss_pred             EEEEcCCCCCC-----------c---------eEEEEee-------cHHHHHHHHHHHHCCCceeecC------CCcccc
Q 023571          208 VVALTGAVTPP-----------G---------FRFVVTS-------NGEVLKKLNPYLESGKVKPIID------PKGPFP  254 (280)
Q Consensus       208 vV~~g~~~~~~-----------~---------~~~~~~~-------~~~~l~~l~~ll~~G~l~~~~~------~~~~~~  254 (280)
                      ++.+|......           .         +.+....       ..+.++++++++++|++++.+.      .++.|+
T Consensus       257 iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~  336 (362)
T 2c0c_A          257 LIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTG  336 (362)
T ss_dssp             EEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBS
T ss_pred             EEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccC
Confidence            99998643110           1         1111111       2568999999999999987654      334789


Q ss_pred             hhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          255 FSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       255 l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      |+++.+|++.+++++..||+||++.
T Consensus       337 l~~~~~A~~~~~~~~~~gKvvv~~~  361 (362)
T 2c0c_A          337 LESIFRAVNYMYMGKNTGKIVVELP  361 (362)
T ss_dssp             TTHHHHHHHHHHTTCCSBEEEEECC
T ss_pred             HHHHHHHHHHHHcCCCCceEEEEcC
Confidence            9999999999999888899999874

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=99.93  E-value=3.4e-25  Score=200.81  Aligned_cols=188  Identities=20%  Similarity=0.219  Sum_probs=157.7

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++.+++++  ++++ +.|.|+|++|||||||+++|||++|++++.|.++.....+|.++|||+             
T Consensus         1 MkA~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   77 (345)
T 3jv7_A            1 MKAVQYTEIGSE--PVVV-DIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTG   77 (345)
T ss_dssp             CEEEEECSTTSC--CEEE-ECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCS
T ss_pred             CeEEEEcCCCCc--eEEE-EecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCC
Confidence            899999998876  8888 999999999999999999999999999999987533456788888887             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~~~~~~aa~l~~~~~t  157 (345)
T 3jv7_A           78 FGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLT  157 (345)
T ss_dssp             CCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTTCCHHHHGGGGTTTHH
T ss_pred             CCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCCCCHHHhhhhhhhHHH
Confidence                                                                                            


Q ss_pred             -------------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC-----
Q 023571          151 -------------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP-----  182 (280)
Q Consensus       151 -------------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~-----  182 (280)
                                                                 +++.+++|+++++++|+++++++++ ++.+.+     
T Consensus       158 a~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~v~~~t~  236 (345)
T 3jv7_A          158 PYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA-GAADAIRELTG  236 (345)
T ss_dssp             HHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST-THHHHHHHHHG
T ss_pred             HHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-cHHHHHHHHhC
Confidence                                                       5568899999999999999999976 554432     


Q ss_pred             -CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCC-CCceE---------E--EEeecHHHHHHHHHHHHCCCceee
Q 023571          183 -EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVT-PPGFR---------F--VVTSNGEVLKKLNPYLESGKVKPI  246 (280)
Q Consensus       183 -~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~-~~~~~---------~--~~~~~~~~l~~l~~ll~~G~l~~~  246 (280)
                       +++|+||||+|   .++.++++|+++|+++.+|.... ...++         +  ......++++++++++++|++++.
T Consensus       237 g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~  316 (345)
T 3jv7_A          237 GQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSELMEVVALARAGRLDIH  316 (345)
T ss_dssp             GGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEESTTTSCTTCEEECCCSCCHHHHHHHHHHHHTTCCCCC
T ss_pred             CCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCceE
Confidence             48999999999   47899999999999999987653 22111         1  122346899999999999999983


Q ss_pred             cCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          247 IDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       247 ~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      .   ++|+|+++.+|++.+++++..||+||++
T Consensus       317 ~---~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          317 T---ETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             E---EEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             E---EEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            3   5899999999999999999999999864

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=99.93  E-value=1.7e-25  Score=200.37  Aligned_cols=185  Identities=19%  Similarity=0.321  Sum_probs=144.6

Q ss_pred             cceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-----------
Q 023571           82 SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-----------  150 (280)
Q Consensus        82 ~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-----------  150 (280)
                      .+|||+++.+  .++.++++ +.|.|+|++|||+|||.++|||++|++++.|.++  ...+|.++|||+           
T Consensus         3 ~tMka~~~~~--~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~p~i~G~e~~G~V~~vG~~v   77 (315)
T 3goh_A            3 EQHQVWAYQT--KTHSVTLN-SVDIPALAADDILVQNQAIGINPVDWKFIKANPI--NWSNGHVPGVDGAGVIVKVGAKV   77 (315)
T ss_dssp             CEEEEEEEET--TTTEEEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTT--CCCTTCCCCSEEEEEEEEECTTS
T ss_pred             cceEEEEEeC--CCCeeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCC--cCCCCCEeeeeeEEEEEEeCCCC
Confidence            4699999986  34569999 9999999999999999999999999999999875  357899999999           


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        78 ~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~  157 (315)
T 3goh_A           78 DSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAVNNL  157 (315)
T ss_dssp             CGGGTTCEEEEECCTTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECCSHHHHH
T ss_pred             CCCCCCCEEEEeCCCCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECCCHHHHH
Confidence                                                                                            


Q ss_pred             ------------EEecChhhHHHHHhCCCCEEEeCCCCCccccCCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCC
Q 023571          151 ------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVT  216 (280)
Q Consensus       151 ------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~  216 (280)
                                  +++.+++|+++++++|++++++  +  ..+..+++|+||||+|  .+..++++|+++|+++.+|....
T Consensus       158 a~qlak~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~--d--~~~v~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~  233 (315)
T 3goh_A          158 LTQMLNNAGYVVDLVSASLSQALAAKRGVRHLYR--E--PSQVTQKYFAIFDAVNSQNAAALVPSLKANGHIICIQDRIP  233 (315)
T ss_dssp             HHHHHHHHTCEEEEECSSCCHHHHHHHTEEEEES--S--GGGCCSCEEEEECC-------TTGGGEEEEEEEEEECCC--
T ss_pred             HHHHHHHcCCEEEEEEChhhHHHHHHcCCCEEEc--C--HHHhCCCccEEEECCCchhHHHHHHHhcCCCEEEEEeCCCC
Confidence                        3333899999999999999994  2  3333578999999998  56889999999999999976542


Q ss_pred             CCce-------EE-EEe-------ec-------HHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeE
Q 023571          217 PPGF-------RF-VVT-------SN-------GEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKV  274 (280)
Q Consensus       217 ~~~~-------~~-~~~-------~~-------~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkv  274 (280)
                      ...+       .+ .+.       ..       .+.++++++++++|++++.+.  ++|+|+++.+|++.++  +..||+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~--~~~~l~~~~~A~~~~~--~~~gKv  309 (315)
T 3goh_A          234 APIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAP--DIFRFEQMIEALDHSE--QTKLKT  309 (315)
T ss_dssp             --------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCC--EEEEGGGHHHHHHHHH--HHCCCE
T ss_pred             ccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccccc--eEecHHHHHHHHHHHH--hcCCcE
Confidence            2111       11 010       11       235789999999999997665  5999999999999998  666999


Q ss_pred             EEEeC
Q 023571          275 VIHPI  279 (280)
Q Consensus       275 Vv~~~  279 (280)
                      ||+++
T Consensus       310 vi~~~  314 (315)
T 3goh_A          310 VLTLN  314 (315)
T ss_dssp             EEESC
T ss_pred             EEEec
Confidence            99985

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=99.93  E-value=9.6e-25  Score=198.90  Aligned_cols=196  Identities=20%  Similarity=0.335  Sum_probs=153.8

Q ss_pred             CcccceeEEEEcccCCC-ccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------
Q 023571           79 TVPSEMKAWLYGEYGGV-DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------  150 (280)
Q Consensus        79 ~~p~~mka~~~~~~g~~-~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------  150 (280)
                      .||.+|||+++.++|.+ +.++++ +.|.|+|++|||+|||.++|||++|++.+.|.++. ...+|.++|||+       
T Consensus        22 ~m~~~mka~~~~~~g~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~P~v~G~E~~G~V~~v   99 (357)
T 1zsy_A           22 SMPARVRALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGL-LPELPAVGGNEGVAQVVAV   99 (357)
T ss_dssp             CCCCCEEEEEESSSSCHHHHEEEE-EECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC-CCCSSEECCSCCEEEEEEE
T ss_pred             hCchhhEEEEEecCCCccceEEEe-eccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCC-CCCCCccccceEEEEEEEe
Confidence            57889999999998875 448888 89999999999999999999999999999998752 335789999999       


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus       100 G~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~  179 (357)
T 1zsy_A          100 GSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSG  179 (357)
T ss_dssp             CTTCCSCCTTCEEEESSSCSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSH
T ss_pred             CCCCCCCCCCCEEEEcCCCCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCH
Confidence                                                                                            


Q ss_pred             -----------------EEecCh----hhHHHHHhCCCCEEEeCCCC---CccccC---CCccEEEeCCC--CHHHHHhc
Q 023571          151 -----------------AATSST----RNLEFLKSLGADLAIDYTKD---NFEDLP---EKFDVVYDAIG--QCDRAVKA  201 (280)
Q Consensus       151 -----------------~~~~s~----~~~~~l~~lga~~vid~~~~---~~~~~~---~g~DvV~d~~g--~~~~~l~~  201 (280)
                                       +++.+.    +++++++++|+++++|+++.   .+.+..   +++|+||||+|  ....++++
T Consensus       180 vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid~~g~~~~~~~~~~  259 (357)
T 1zsy_A          180 VGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQ  259 (357)
T ss_dssp             HHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEESSCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEECCCcHHHHHHHHh
Confidence                             333332    25688999999999998542   232222   26999999999  46679999


Q ss_pred             cccCCEEEEEcCCCC-CCc----------eEEEEee------------cHHHHHHHHHHHHCCCceeecCCCcccchhhH
Q 023571          202 IKEGGTVVALTGAVT-PPG----------FRFVVTS------------NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQV  258 (280)
Q Consensus       202 l~~gG~vV~~g~~~~-~~~----------~~~~~~~------------~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v  258 (280)
                      ++++|+++.+|.... +..          +.+....            .++.++++++++++|++++.+.  ++|+|+++
T Consensus       260 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~--~~~~l~~~  337 (357)
T 1zsy_A          260 LARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPAC--SQVPLQDY  337 (357)
T ss_dssp             SCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCE--EEEEGGGH
T ss_pred             hCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCccc--eEEcHHHH
Confidence            999999999985431 111          1111110            1356789999999999998765  48999999


Q ss_pred             HHHHHHHHhCCCCeeEEEEe
Q 023571          259 VEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       259 ~~A~~~l~~~~~~gkvVv~~  278 (280)
                      .+|++.+++++..||+||++
T Consensus       338 ~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          338 QSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHHHHHHhCCCCCcEEEeC
Confidence            99999999988889999974

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=99.93  E-value=5.6e-25  Score=199.73  Aligned_cols=188  Identities=14%  Similarity=0.137  Sum_probs=154.1

Q ss_pred             cccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE---------
Q 023571           80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV---------  150 (280)
Q Consensus        80 ~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~---------  150 (280)
                      |+.+|||+++.+++.+  ++++ +.|.|+|++|||||||.++|||++|++++.|.++  ...+|.++|||+         
T Consensus         1 M~m~mka~~~~~~~~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~p~i~G~E~~G~V~~vG~   75 (348)
T 3two_A            1 MRVQSKGFAIFSKDEH--FKPH-DFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWK--EGIYPMIPGHEIAGIIKEVGK   75 (348)
T ss_dssp             CCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSS--CCCSSBCCCCCEEEEEEEECT
T ss_pred             CceEEEEEEEccCCCC--CeEE-EeeCCCCCCCeEEEEEEEeeecccchhhhcCCCC--CCCCCeecCcceeEEEEEECC
Confidence            3457999999887654  8888 9999999999999999999999999999999875  245677777765         


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        76 ~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~a  155 (348)
T 3two_A           76 GVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKV  155 (348)
T ss_dssp             TCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHH
T ss_pred             CCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHh
Confidence                                                                                            


Q ss_pred             -------------------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc
Q 023571          151 -------------------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL  181 (280)
Q Consensus       151 -------------------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~  181 (280)
                                                                       +++.+++++++++++|+++++ .+ .+... 
T Consensus       156 a~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~-~~~~~-  232 (348)
T 3two_A          156 APLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY-TD-PKQCK-  232 (348)
T ss_dssp             GGGGTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE-SS-GGGCC-
T ss_pred             hhhhhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec-CC-HHHHh-
Confidence                                                             556789999999999999998 33 22222 


Q ss_pred             CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCC-CCCc-eE-----------E--EEeecHHHHHHHHHHHHCCCc
Q 023571          182 PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAV-TPPG-FR-----------F--VVTSNGEVLKKLNPYLESGKV  243 (280)
Q Consensus       182 ~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~-~~~~-~~-----------~--~~~~~~~~l~~l~~ll~~G~l  243 (280)
                       +++|+||||+|   .++.++++|+++|+++.+|... .... ++           +  ......++++++++++++|++
T Consensus       233 -~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l  311 (348)
T 3two_A          233 -EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEMVDFSIKHNI  311 (348)
T ss_dssp             -SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCHHHHHHHHHHHHHTTC
T ss_pred             -cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCHHHHHHHHHHHHhCCC
Confidence             39999999998   5899999999999999998766 3322 22           1  112245789999999999999


Q ss_pred             eeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          244 KPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       244 ~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      ++.+   ++|+|+++++|++.+++++..||+||+++
T Consensus       312 ~~~~---~~~~l~~~~~A~~~~~~~~~~gKvVi~~~  344 (348)
T 3two_A          312 YPEI---DLILGKDIDTAYHNLTHGKAKFRYVIDMK  344 (348)
T ss_dssp             CCCE---EEECGGGHHHHHHHHHTTCCCSEEEEEGG
T ss_pred             CceE---EEEEHHHHHHHHHHHHcCCCceEEEEecC
Confidence            9854   48999999999999999999999999875

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=99.93  E-value=4.7e-25  Score=200.53  Aligned_cols=189  Identities=18%  Similarity=0.154  Sum_probs=155.8

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHH-HHcCCCCCCCCCCCcccCceE------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGK-RRQGKFKATDSPLPTVPGYDV------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~-~~~g~~~~~~~~~P~i~G~e~------------  150 (280)
                      |||+++.++++   ++++ +.|.|+|++|||+|||+++|||++|++ +..|.++   ..+|.++|||+            
T Consensus         1 MkA~~~~~~~~---~~~~-e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~---~~~p~v~G~E~~G~V~~vG~~v~   73 (352)
T 3fpc_A            1 MKGFAMLSIGK---VGWI-EKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG---ERHNMILGHEAVGEVVEVGSEVK   73 (352)
T ss_dssp             CEEEEEEETTE---EEEE-ECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC---CCSSEECCCEEEEEEEEECTTCC
T ss_pred             CeEEEEccCCC---ceEE-eCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC---CCCCcccCCcceEEEEEECCCCC
Confidence            89999988764   7888 999999999999999999999999999 6688774   36788999988            


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        74 ~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~  153 (352)
T 3fpc_A           74 DFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMT  153 (352)
T ss_dssp             SCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHH
T ss_pred             cCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhH
Confidence                                                                                            


Q ss_pred             ------------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC------
Q 023571          151 ------------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------  182 (280)
Q Consensus       151 ------------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------  182 (280)
                                                                +++.+++++++++++|+++++|++++++.+.+      
T Consensus       154 ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g  233 (352)
T 3fpc_A          154 TGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDG  233 (352)
T ss_dssp             HHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTT
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCC
Confidence                                                      55566888999999999999999988876542      


Q ss_pred             CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCceE--------------EEE--e-ecHHHHHHHHHHHHCCC
Q 023571          183 EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGFR--------------FVV--T-SNGEVLKKLNPYLESGK  242 (280)
Q Consensus       183 ~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~~--------------~~~--~-~~~~~l~~l~~ll~~G~  242 (280)
                      +++|+||||+|   .++.++++|+++|+++.+|.......+.              +..  . ...+.++++++++++|+
T Consensus       234 ~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~  313 (352)
T 3fpc_A          234 KGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYKR  313 (352)
T ss_dssp             CCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHHTTS
T ss_pred             CCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHHHcCC
Confidence            47999999998   3899999999999999998765322211              111  1 23578999999999999


Q ss_pred             ceeecCCCcccc-hhhHHHHHHHHHhCCCC-eeEEEEeC
Q 023571          243 VKPIIDPKGPFP-FSQVVEAFSYIETNKAT-GKVVIHPI  279 (280)
Q Consensus       243 l~~~~~~~~~~~-l~~v~~A~~~l~~~~~~-gkvVv~~~  279 (280)
                      +++....+++|+ |+++++|++.+++++.. +|+||+++
T Consensus       314 i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          314 VDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             CCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             CChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            997644446898 99999999999987654 89999874

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=99.93  E-value=6.8e-25  Score=199.60  Aligned_cols=196  Identities=28%  Similarity=0.432  Sum_probs=155.6

Q ss_pred             CcccceeEEEEcccCCCccEEE-eeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------
Q 023571           79 TVPSEMKAWLYGEYGGVDVLKF-DEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------  150 (280)
Q Consensus        79 ~~p~~mka~~~~~~g~~~~l~l-~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------  150 (280)
                      .+|.+|||+++.+++.++.+++ + +.|.|+|++|||+|||.++|||++|++++.|.++. ...+|.++|||+       
T Consensus        25 ~~~~~Mka~~~~~~g~~~~l~~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~P~v~G~E~~G~V~~v  102 (351)
T 1yb5_A           25 TGQKLMRAVRVFEFGGPEVLKLRS-DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLLPYTPGSDVAGVIEAV  102 (351)
T ss_dssp             ---CEEEEEEESSCSSGGGEEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC-CCCSSBCCCSCEEEEEEEE
T ss_pred             cCcceEEEEEEccCCCcceeEEee-ecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCCcCCceeEEEEEEE
Confidence            3567799999999888878999 7 89999999999999999999999999999997752 346799999999       


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus       103 G~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasgg  182 (351)
T 1yb5_A          103 GDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGG  182 (351)
T ss_dssp             CTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSH
T ss_pred             CCCCCCCCCCCEEEEeCCCCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCCh
Confidence                                                                                            


Q ss_pred             -----------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC------CCccEEEeCCC--CHHHHHhccccC
Q 023571          151 -----------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------EKFDVVYDAIG--QCDRAVKAIKEG  205 (280)
Q Consensus       151 -----------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------~g~DvV~d~~g--~~~~~l~~l~~g  205 (280)
                                       +++.+++++++++++|++.++|+.++++.+.+      +++|++|||+|  .+..++++|+++
T Consensus       183 iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~~~~~~~~~~l~~~  262 (351)
T 1yb5_A          183 VGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHG  262 (351)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCChHHHHHHHHhccCC
Confidence                             56678889999999999999999887765432      48999999998  578999999999


Q ss_pred             CEEEEEcCCCCC---------CceEEEEe----ec----HHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHH-HHh
Q 023571          206 GTVVALTGAVTP---------PGFRFVVT----SN----GEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSY-IET  267 (280)
Q Consensus       206 G~vV~~g~~~~~---------~~~~~~~~----~~----~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~-l~~  267 (280)
                      |+++.+|.....         ..+.+...    ..    .+.++.+.+++++|++++.+.  ++|+|+++.+|++. ++.
T Consensus       263 G~iv~~g~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~--~~~~l~~~~~A~~~~~~~  340 (351)
T 1yb5_A          263 GRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIG--SQYPLEKVAEAHENIIHG  340 (351)
T ss_dssp             EEEEECCCCSCEEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCCCCCEE--EEEEGGGHHHHHHHHHHS
T ss_pred             CEEEEEecCCCCccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCccCccc--eEEcHHHHHHHHHHHHHh
Confidence            999999864310         01111111    12    244566777888999988765  48999999999999 555


Q ss_pred             CCCCeeEEEEe
Q 023571          268 NKATGKVVIHP  278 (280)
Q Consensus       268 ~~~~gkvVv~~  278 (280)
                      ++..||+||++
T Consensus       341 ~~~~gKvvi~~  351 (351)
T 1yb5_A          341 SGATGKMILLL  351 (351)
T ss_dssp             SCCSSEEEEEC
T ss_pred             CCCCeEEEEeC
Confidence            66789999974

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=99.93  E-value=6.7e-25  Score=199.74  Aligned_cols=200  Identities=25%  Similarity=0.429  Sum_probs=157.6

Q ss_pred             CCCCcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-----
Q 023571           76 KVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-----  150 (280)
Q Consensus        76 ~~~~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-----  150 (280)
                      ....+|.+|||+++..+|.++.++++ +.+.|+|++|||+|||.++|||++|++.+.|.++. ...+|.++|||+     
T Consensus        15 ~~~~~~~~Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~p~v~G~E~~G~V~   92 (354)
T 2j8z_A           15 TENLYFQSMLAVHFDKPGGPENLYVK-EVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP-PPGASNILGLEASGHVA   92 (354)
T ss_dssp             ------CEEEEEEESSCSSGGGEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-CTTSCSSSCSEEEEEEE
T ss_pred             ccccchhheeEEEEccCCCccceEEe-ecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCC-CCCCCcccceeeEEEEE
Confidence            34467888999999998887789999 99999999999999999999999999999998752 335789999999     


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        93 ~vG~~v~~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~  172 (354)
T 2j8z_A           93 ELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGL  172 (354)
T ss_dssp             EECSCC--CCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTT
T ss_pred             EECCCcCCCCCCCCEEEEecCCCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCc
Confidence                                                                                            


Q ss_pred             -------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC------CCccEEEeCCC--CHHHHHhccc
Q 023571          151 -------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------EKFDVVYDAIG--QCDRAVKAIK  203 (280)
Q Consensus       151 -------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------~g~DvV~d~~g--~~~~~l~~l~  203 (280)
                                         +++.+++++++++++|++.++|+.++++.+.+      +++|++|||+|  .+..++++|+
T Consensus       173 ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~~l~  252 (354)
T 2j8z_A          173 SGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLA  252 (354)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCGGGHHHHHHHEE
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCchHHHHHHHhcc
Confidence                               56668899999999999999999987765432      47999999999  6889999999


Q ss_pred             cCCEEEEEcCCCCC---Cce---------EEEEe---e-cH--------HHHHHHHHHHHCC---CceeecCCCcccchh
Q 023571          204 EGGTVVALTGAVTP---PGF---------RFVVT---S-NG--------EVLKKLNPYLESG---KVKPIIDPKGPFPFS  256 (280)
Q Consensus       204 ~gG~vV~~g~~~~~---~~~---------~~~~~---~-~~--------~~l~~l~~ll~~G---~l~~~~~~~~~~~l~  256 (280)
                      ++|+++.+|.....   ..+         .+...   . ..        +.++++++++++|   ++++.+.  ++|+|+
T Consensus       253 ~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~--~~~~l~  330 (354)
T 2j8z_A          253 LDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLD--RIYPVT  330 (354)
T ss_dssp             EEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEE--EEEEGG
T ss_pred             CCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccc--eEEcHH
Confidence            99999999875421   111         11111   0 11        1234688899999   8877665  489999


Q ss_pred             hHHHHHHHHHhCCCCeeEEEEeC
Q 023571          257 QVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       257 ~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      ++.+|++.+++++..||+||++.
T Consensus       331 ~~~~A~~~~~~~~~~gKvvv~~~  353 (354)
T 2j8z_A          331 EIQEAHKYMEANKNIGKIVLELP  353 (354)
T ss_dssp             GHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHHHHHhCCCCceEEEecC
Confidence            99999999999888899999875

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.92  E-value=1.5e-24  Score=195.08  Aligned_cols=192  Identities=20%  Similarity=0.344  Sum_probs=158.4

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++..+|.++.++++ +.+.|+|++|||+|||.++|||++|++.+.|.++  ...+|.++|||+             
T Consensus         2 Mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~p~v~G~E~~G~V~~vG~~v~~   78 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGLYP--PPSLPSGLGTEAAGIVSKVGSGVKH   78 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC--CSSSSBCCCSCEEEEEEEECTTCCS
T ss_pred             cEEEEEcCCCChhheEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC--CCCCCCCCCceeEEEEEEECCCCCC
Confidence            899999998877789999 9999999999999999999999999999999774  345789999999             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~~GdrV~~~g~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~  158 (327)
T 1qor_A           79 IKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIAC  158 (327)
T ss_dssp             CCTTCEEEESCCSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHH
T ss_pred             CCCCCEEEECCCCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHH
Confidence                                                                                            


Q ss_pred             -----------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEE
Q 023571          151 -----------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVAL  211 (280)
Q Consensus       151 -----------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~  211 (280)
                                 +++.+++++++++++|++.++|+.++++.+.      .+++|++|||+|  .++.++++|+++|+++.+
T Consensus       159 ~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~iv~~  238 (327)
T 1qor_A          159 QWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSF  238 (327)
T ss_dssp             HHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEEC
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhcCCCEEEEE
Confidence                       5667788999999999999999988776543      247999999998  689999999999999999


Q ss_pred             cCCCCC-C-----------ceEEEEee----------cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCC
Q 023571          212 TGAVTP-P-----------GFRFVVTS----------NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK  269 (280)
Q Consensus       212 g~~~~~-~-----------~~~~~~~~----------~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~  269 (280)
                      |..... .           .+.+....          ..+.++++++++++|++++.+...++|+|+++.+|++.+++++
T Consensus       239 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~l~~~~~A~~~~~~~~  318 (327)
T 1qor_A          239 GNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRA  318 (327)
T ss_dssp             CCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCCCGGGEEEGGGHHHHHHHHHTTC
T ss_pred             ecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCcccccccCcEEcHHHHHHHHHHHHhCC
Confidence            875421 1           11111000          2456899999999999987654114899999999999999988


Q ss_pred             CCeeEEEEe
Q 023571          270 ATGKVVIHP  278 (280)
Q Consensus       270 ~~gkvVv~~  278 (280)
                      ..||+||++
T Consensus       319 ~~gKvvl~~  327 (327)
T 1qor_A          319 TQGSSLLIP  327 (327)
T ss_dssp             CCBCCEEEC
T ss_pred             CCceEEEeC
Confidence            889999874

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=99.92  E-value=9.7e-26  Score=206.57  Aligned_cols=196  Identities=20%  Similarity=0.236  Sum_probs=156.1

Q ss_pred             CCCcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE------
Q 023571           77 VGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV------  150 (280)
Q Consensus        77 ~~~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~------  150 (280)
                      ...+|.+|||+++.+++   .++++ +.|.|+|++|||+|||.++|||++|++++.|.++   ..+|.++|||+      
T Consensus        17 ~~~~p~~mkA~v~~~~~---~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---~~~p~v~G~e~~G~V~~   89 (370)
T 4ej6_A           17 NLYFQSMMKAVRLESVG---NISVR-NVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP---STPPVTLGHEFCGIVVE   89 (370)
T ss_dssp             ----CCEEEEEEEEETT---EEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC---CCSSEECCCSEEEEEEE
T ss_pred             ccccchheEEEEEecCC---ceEEE-EccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC---CCCCeecCcceEEEEEE
Confidence            34578899999998764   48999 9999999999999999999999999999999873   56789999998      


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        90 vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aal~~~~~  169 (370)
T 4ej6_A           90 AGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLA  169 (370)
T ss_dssp             ECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGGGHHHHH
T ss_pred             ECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHhhhhHHH
Confidence                                                                                            


Q ss_pred             ------------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc-------
Q 023571          151 ------------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-------  181 (280)
Q Consensus       151 ------------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-------  181 (280)
                                                                +++.+++++++++++|+++++|++++++.+.       
T Consensus       170 ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~  249 (370)
T 4ej6_A          170 CCLHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGL  249 (370)
T ss_dssp             HHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSS
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhc
Confidence                                                      4557889999999999999999998876442       


Q ss_pred             -CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCC--CCce----------EEE-EeecHHHHHHHHHHHHCCCce
Q 023571          182 -PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVT--PPGF----------RFV-VTSNGEVLKKLNPYLESGKVK  244 (280)
Q Consensus       182 -~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~--~~~~----------~~~-~~~~~~~l~~l~~ll~~G~l~  244 (280)
                       .+++|+||||+|   .++.++++|+++|+++.+|....  ...+          .+. .......++++++++++|+++
T Consensus       250 ~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~  329 (370)
T 4ej6_A          250 VPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATGAIE  329 (370)
T ss_dssp             STTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCTTCHHHHHHHHHTTCSC
T ss_pred             cCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccChHHHHHHHHHHHcCCCC
Confidence             148999999998   47899999999999999987653  2111          111 111235689999999999997


Q ss_pred             eecCCCcccchhhHHHHHHHHHhCCC-CeeEEEEeC
Q 023571          245 PIIDPKGPFPFSQVVEAFSYIETNKA-TGKVVIHPI  279 (280)
Q Consensus       245 ~~~~~~~~~~l~~v~~A~~~l~~~~~-~gkvVv~~~  279 (280)
                      +....+++|+|+++.+|++.+++++. .+|+|+++.
T Consensus       330 ~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~  365 (370)
T 4ej6_A          330 IDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAE  365 (370)
T ss_dssp             CGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC--
T ss_pred             hhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEccc
Confidence            65443469999999999999988774 478887653

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=99.92  E-value=2e-24  Score=195.42  Aligned_cols=189  Identities=23%  Similarity=0.350  Sum_probs=156.7

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++..++.+  ++++ +.|.|+|++|||+|||.++|||++|++.+.|.++ ....+|.++|||+             
T Consensus         1 Mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~p~v~GhE~~G~V~~vG~~v~~   76 (339)
T 1rjw_A            1 MKAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP-VKPKLPLIPGHEGVGIVEEVGPGVTH   76 (339)
T ss_dssp             CEEEEBSSTTSC--CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS-SCCCSSBCCCSCEEEEEEEECTTCCS
T ss_pred             CeEEEEcCCCCC--cEEE-EeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCC-cCCCCCeeccccceEEEEEECCCCCc
Confidence            899999888754  7888 9999999999999999999999999999999765 2345788888887             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        77 ~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~  156 (339)
T 1rjw_A           77 LKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKA  156 (339)
T ss_dssp             CCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHH
T ss_pred             CCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHH
Confidence                                                                                            


Q ss_pred             ------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC----CCccEEEe
Q 023571          151 ------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP----EKFDVVYD  190 (280)
Q Consensus       151 ------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~----~g~DvV~d  190 (280)
                                                          +++.+++++++++++|+++++|+.++++.+.+    +++|+|||
T Consensus       157 l~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid  236 (339)
T 1rjw_A          157 LKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVV  236 (339)
T ss_dssp             HHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEE
T ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEE
Confidence                                                55568899999999999999999877765432    68999999


Q ss_pred             CCC---CHHHHHhccccCCEEEEEcCCCCCCceE----------E--EEeecHHHHHHHHHHHHCCCceeecCCCcccch
Q 023571          191 AIG---QCDRAVKAIKEGGTVVALTGAVTPPGFR----------F--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPF  255 (280)
Q Consensus       191 ~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~~----------~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l  255 (280)
                      |+|   .++.++++|+++|+++.+|.......++          +  ......++++++++++++|++++..   ++|+|
T Consensus       237 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~---~~~~l  313 (339)
T 1rjw_A          237 TAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTII---EVQPL  313 (339)
T ss_dssp             SSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCCE---EEEEG
T ss_pred             CCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcCCCCccE---EEEcH
Confidence            998   4789999999999999998765321111          1  1122468899999999999998753   48999


Q ss_pred             hhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          256 SQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       256 ~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      +++++|++.+++++..||+||+++
T Consensus       314 ~~~~~A~~~~~~~~~~gKvvi~~~  337 (339)
T 1rjw_A          314 EKINEVFDRMLKGQINGRVVLTLE  337 (339)
T ss_dssp             GGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHcCCCceEEEEecC
Confidence            999999999999888899999875

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=99.92  E-value=1e-24  Score=198.29  Aligned_cols=196  Identities=20%  Similarity=0.201  Sum_probs=152.4

Q ss_pred             cccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHc-CCCCCCCCCCCcccCceE--------
Q 023571           80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQ-GKFKATDSPLPTVPGYDV--------  150 (280)
Q Consensus        80 ~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~-g~~~~~~~~~P~i~G~e~--------  150 (280)
                      |+.+|||+++.+++   .++++ +.|.|+|++|||+|||.++|||++|++.+. |.++.....+|.++|||+        
T Consensus         1 m~~~mka~~~~~~~---~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG   76 (352)
T 1e3j_A            1 MASDNLSAVLYKQN---DLRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVG   76 (352)
T ss_dssp             ---CCEEEEEEETT---EEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEEC
T ss_pred             CcccCEEEEEEcCC---cEEEE-EecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeC
Confidence            34569999998754   48899 999999999999999999999999999887 433222235788999988        


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        77 ~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~t  156 (352)
T 1e3j_A           77 KNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSV  156 (352)
T ss_dssp             TTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTHHHHHH
T ss_pred             CCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhhchHHH
Confidence                                                                                            


Q ss_pred             ----------------------------------------EEecChhhHHHHHhCCCCEEEeCCC-CCcccc--------
Q 023571          151 ----------------------------------------AATSSTRNLEFLKSLGADLAIDYTK-DNFEDL--------  181 (280)
Q Consensus       151 ----------------------------------------~~~~s~~~~~~l~~lga~~vid~~~-~~~~~~--------  181 (280)
                                                              +++.+++++++++++|+++++|+++ +++.+.        
T Consensus       157 a~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~  236 (352)
T 1e3j_A          157 GVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSA  236 (352)
T ss_dssp             HHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccc
Confidence                                                    5557889999999999999999985 555432        


Q ss_pred             -CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCce----------EEEE-eecHHHHHHHHHHHHCCCceee
Q 023571          182 -PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF----------RFVV-TSNGEVLKKLNPYLESGKVKPI  246 (280)
Q Consensus       182 -~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~----------~~~~-~~~~~~l~~l~~ll~~G~l~~~  246 (280)
                       .+++|+||||+|   .++.++++|+++|+++.+|.......+          .+.. ....+.++++++++++|+++..
T Consensus       237 ~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~  316 (352)
T 1e3j_A          237 IGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGRCNVK  316 (352)
T ss_dssp             SSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCHHHHHHHHHTTSCCCG
T ss_pred             cCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccchHHHHHHHHHHHcCCCChH
Confidence             257999999998   368999999999999999865422111          1111 1124568999999999997643


Q ss_pred             cCCCcccchhhHHHHHHHHHhCC-CCeeEEEEeC
Q 023571          247 IDPKGPFPFSQVVEAFSYIETNK-ATGKVVIHPI  279 (280)
Q Consensus       247 ~~~~~~~~l~~v~~A~~~l~~~~-~~gkvVv~~~  279 (280)
                      ...+++|+|+++++|++.+++++ ..+|+||++.
T Consensus       317 ~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~  350 (352)
T 1e3j_A          317 QLVTHSFKLEQTVDAFEAARKKADNTIKVMISCR  350 (352)
T ss_dssp             GGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECC
T ss_pred             HheeEEecHHHHHHHHHHHhcCCCCceEEEEecC
Confidence            33335899999999999999998 6899999874

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=99.92  E-value=1.4e-24  Score=196.75  Aligned_cols=191  Identities=28%  Similarity=0.425  Sum_probs=159.7

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++.+++.++.++++ +.+.|+|++|||||||.++|||++|++++.|.++ ....+|.++|||+             
T Consensus         1 Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~p~v~G~E~~G~V~~vG~~v~~   78 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVA-DLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVAS-PKLPLPHVLGADGSGVVDAVGPGVEG   78 (343)
T ss_dssp             CEEEEECSSSSGGGEEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSS-TTCCSSEECCSEEEEEEEEECSSCCS
T ss_pred             CeEEEEecCCCCceEEEE-ecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCC-CCCCCCcccccceEEEEEEECCCCCC
Confidence            899999998877779999 9999999999999999999999999999999775 2246788999998             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al  158 (343)
T 2eih_A           79 FAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMV  158 (343)
T ss_dssp             CCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHH
Confidence                                                                                            


Q ss_pred             -------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccE
Q 023571          151 -------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDV  187 (280)
Q Consensus       151 -------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~Dv  187 (280)
                                                           +++.+++++++++++|+++++|++++++.+.      .+++|+
T Consensus       159 ~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~  238 (343)
T 2eih_A          159 VDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADK  238 (343)
T ss_dssp             TTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEE
T ss_pred             HHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceE
Confidence                                                 5667789999999999999999988776442      247999


Q ss_pred             EEeCCC--CHHHHHhccccCCEEEEEcCCCCCC-----------ceEEEE--eecHHHHHHHHHHHHCCCceeecCCCcc
Q 023571          188 VYDAIG--QCDRAVKAIKEGGTVVALTGAVTPP-----------GFRFVV--TSNGEVLKKLNPYLESGKVKPIIDPKGP  252 (280)
Q Consensus       188 V~d~~g--~~~~~l~~l~~gG~vV~~g~~~~~~-----------~~~~~~--~~~~~~l~~l~~ll~~G~l~~~~~~~~~  252 (280)
                      |||++|  .++.++++|+++|+++.+|......           .+.+..  ....+.++++++++++|++++.+.  ++
T Consensus       239 vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~i~--~~  316 (343)
T 2eih_A          239 VVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPVVG--QV  316 (343)
T ss_dssp             EEESSCSSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHHTSSCCCEE--EE
T ss_pred             EEECCCHHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHcCCCCCcee--EE
Confidence            999998  6899999999999999998754211           111111  224678999999999999987765  49


Q ss_pred             cchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          253 FPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       253 ~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      |+|+++.+|++.+++++..||+||++
T Consensus       317 ~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          317 LPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             EEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             eeHHHHHHHHHHHHcCCCceEEEEec
Confidence            99999999999999988889999975

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=99.92  E-value=3.3e-24  Score=196.55  Aligned_cols=199  Identities=31%  Similarity=0.535  Sum_probs=160.3

Q ss_pred             CCCcccceeEEEEcccCCCccEEE-eeeccCCCC-CCCcEEEEEEEEecChHHHHHHcCCCCC-------------CCCC
Q 023571           77 VGTVPSEMKAWLYGEYGGVDVLKF-DEKVTVPQV-KEDQVLIKVVAAALNPVDGKRRQGKFKA-------------TDSP  141 (280)
Q Consensus        77 ~~~~p~~mka~~~~~~g~~~~l~l-~~~~~~p~~-~~~eVlVkV~aagl~~~D~~~~~g~~~~-------------~~~~  141 (280)
                      +..++.+|||+++..+|.++.+++ + +.|.|.+ ++|||||||.++|||++|++++.|.++.             ....
T Consensus        15 ~~~~~~~mka~~~~~~g~~~~l~~~~-~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~   93 (375)
T 2vn8_A           15 TENLYFQSMAWVIDKYGKNEVLRFTQ-NMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEE   93 (375)
T ss_dssp             ---CCCCEEEEEBSSCCSGGGCEEEE-EECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTT
T ss_pred             ccccCccceeEEeccCCCccceEEec-cccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCcccccccccccccccccccc
Confidence            445778899999999887777899 7 8999985 9999999999999999999999986420             1123


Q ss_pred             CCcccCceE-----------------------------------------------------------------------
Q 023571          142 LPTVPGYDV-----------------------------------------------------------------------  150 (280)
Q Consensus       142 ~P~i~G~e~-----------------------------------------------------------------------  150 (280)
                      +|.++|||+                                                                       
T Consensus        94 ~P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~  173 (375)
T 2vn8_A           94 FPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINK  173 (375)
T ss_dssp             CSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTT
T ss_pred             CCcccceeeeEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHH
Confidence            789999999                                                                       


Q ss_pred             --------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc---CCCccEEE
Q 023571          151 --------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL---PEKFDVVY  189 (280)
Q Consensus       151 --------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~---~~g~DvV~  189 (280)
                                                            +++.+++++++++++|++.++|++++++.+.   .+++|+||
T Consensus       174 ~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vi  253 (375)
T 2vn8_A          174 VGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFIL  253 (375)
T ss_dssp             TTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEE
T ss_pred             hcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEE
Confidence                                                  4445788999999999999999998776543   26899999


Q ss_pred             eCCC-C-H--HHHHhccccCCEEEEEcCCCCC---------------------------CceEEE---EeecHHHHHHHH
Q 023571          190 DAIG-Q-C--DRAVKAIKEGGTVVALTGAVTP---------------------------PGFRFV---VTSNGEVLKKLN  235 (280)
Q Consensus       190 d~~g-~-~--~~~l~~l~~gG~vV~~g~~~~~---------------------------~~~~~~---~~~~~~~l~~l~  235 (280)
                      ||+| . .  ..++++++++|+++.+|.....                           ....+.   .....+.+++++
T Consensus       254 d~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  333 (375)
T 2vn8_A          254 DNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIA  333 (375)
T ss_dssp             ESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHH
T ss_pred             ECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEeCCCHHHHHHHH
Confidence            9999 3 4  7899999999999999864310                           111111   122467889999


Q ss_pred             HHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          236 PYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       236 ~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      +++++|++++.+.  ++|+|+++.+|++.+++++..||+||++
T Consensus       334 ~l~~~g~l~~~i~--~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          334 ELVDAGKIRPVIE--QTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHTTSCCCCEE--EEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             HHHHCCCcccCcC--eEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            9999999987665  4899999999999999998889999975

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=99.92  E-value=2.4e-24  Score=195.53  Aligned_cols=193  Identities=19%  Similarity=0.292  Sum_probs=157.8

Q ss_pred             cccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE---------
Q 023571           80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV---------  150 (280)
Q Consensus        80 ~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~---------  150 (280)
                      +|.+|||+++.+++.+  ++++ +.|.|+|++|||+|||.++|||++|++.+.|.++ ....+|.++|||+         
T Consensus         2 ~p~~mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~p~v~G~E~~G~V~~vG~   77 (347)
T 2hcy_A            2 IPETQKGVIFYESHGK--LEYK-DIPVPKPKANELLINVKYSGVCHTDLHAWHGDWP-LPVKLPLVGGHEGAGVVVGMGE   77 (347)
T ss_dssp             CCSEEEEEEESSTTCC--CEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSS-SCCCSSEECCCEEEEEEEEECT
T ss_pred             CCcccEEEEEeCCCCC--CEEE-EeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCC-CCCCCCcccCccceEEEEEECC
Confidence            6788999999988754  7888 9999999999999999999999999999999765 2345788888888         


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        78 ~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~t  157 (347)
T 2hcy_A           78 NVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGIT  157 (347)
T ss_dssp             TCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHH
T ss_pred             CCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHH
Confidence                                                                                            


Q ss_pred             -----------------------------------------EEecChhhHHHHHhCCCCEEEeCC-CCCccccC-----C
Q 023571          151 -----------------------------------------AATSSTRNLEFLKSLGADLAIDYT-KDNFEDLP-----E  183 (280)
Q Consensus       151 -----------------------------------------~~~~s~~~~~~l~~lga~~vid~~-~~~~~~~~-----~  183 (280)
                                                               +++.+++++++++++|++.++|+. .+++.+..     +
T Consensus       158 a~~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~  237 (347)
T 2hcy_A          158 VYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDG  237 (347)
T ss_dssp             HHHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTS
T ss_pred             HHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCC
Confidence                                                     555688889999999999999987 45554322     3


Q ss_pred             CccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCC-Cce----------EE--EEeecHHHHHHHHHHHHCCCceeec
Q 023571          184 KFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTP-PGF----------RF--VVTSNGEVLKKLNPYLESGKVKPII  247 (280)
Q Consensus       184 g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~-~~~----------~~--~~~~~~~~l~~l~~ll~~G~l~~~~  247 (280)
                      ++|+|||++|   .++.++++|+++|+++.+|..... ..+          .+  ......++++++++++++|++++..
T Consensus       238 ~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~  317 (347)
T 2hcy_A          238 GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSPI  317 (347)
T ss_dssp             CEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHHHHHHTTSCCCCE
T ss_pred             CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHHHHHHhCCCccce
Confidence            7999999998   378999999999999999876521 111          11  1122468899999999999998753


Q ss_pred             CCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          248 DPKGPFPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       248 ~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                         ++|+|+++++|++.+++++..||+||+++
T Consensus       318 ---~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  346 (347)
T 2hcy_A          318 ---KVVGLSTLPEIYEKMEKGQIVGRYVVDTS  346 (347)
T ss_dssp             ---EEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred             ---EEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence               48999999999999999888899999875

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=99.92  E-value=3.8e-25  Score=199.27  Aligned_cols=195  Identities=19%  Similarity=0.268  Sum_probs=155.1

Q ss_pred             cccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE---------
Q 023571           80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV---------  150 (280)
Q Consensus        80 ~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~---------  150 (280)
                      ||.+|||+++.+++.++.++++ +.|.|+|++|||+|||.++|||++|++.+.|.++ ....+|.++|||+         
T Consensus         1 m~~~mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~p~i~G~E~~G~V~~~~v   78 (330)
T 1tt7_A            1 MSTLFQALQAEKNADDVSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN-IVREYPLILGIDAAGTVVSSND   78 (330)
T ss_dssp             -CCEEEEEEECCGGGSCCCEEE-EEESSSSCSSSEEEEECCEEECHHHHHHTSTTCT-TCSSCSEECCSEEEEEEEECSS
T ss_pred             CCCcceEEEEecCCCCcceeEe-ecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCC-CcCCCCccccceEEEEEEEcCC
Confidence            5678999999988765568899 9999999999999999999999999999998764 2346789999998         


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~G  158 (330)
T 1tt7_A           79 PRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTG  158 (330)
T ss_dssp             TTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEES
T ss_pred             CCCCCCCEEEEcccccCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEEC
Confidence                                                                                            


Q ss_pred             ---------------------EEecChhhHHHHHhCCCCEEEeCCCCC--cccc--CCCccEEEeCCC--CHHHHHhccc
Q 023571          151 ---------------------AATSSTRNLEFLKSLGADLAIDYTKDN--FEDL--PEKFDVVYDAIG--QCDRAVKAIK  203 (280)
Q Consensus       151 ---------------------~~~~s~~~~~~l~~lga~~vid~~~~~--~~~~--~~g~DvV~d~~g--~~~~~l~~l~  203 (280)
                                           +++.+++++++++++|+++++|+++.+  ....  .+++|+||||+|  .+..++++++
T Consensus       159 a~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~  238 (330)
T 1tt7_A          159 ATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQ  238 (330)
T ss_dssp             TTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCTHHHHHHHTTEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcHHHHHHHHHhhc
Confidence                                 566778899999999999999986532  1111  257999999999  5889999999


Q ss_pred             cCCEEEEEcCCCCC-C----------ceEEEEe----e----cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHH
Q 023571          204 EGGTVVALTGAVTP-P----------GFRFVVT----S----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSY  264 (280)
Q Consensus       204 ~gG~vV~~g~~~~~-~----------~~~~~~~----~----~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~  264 (280)
                      ++|+++.+|..... .          .+.+...    .    ..+.++++.+++++|++++.+.  ++|+|+++.+|++.
T Consensus       239 ~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~i~--~~~~l~~~~~A~~~  316 (330)
T 1tt7_A          239 YGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQLLTIVD--REVSLEETPGALKD  316 (330)
T ss_dssp             EEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCSTTSEE--EEECSTTHHHHHHH
T ss_pred             CCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCcccccc--eEEcHHHHHHHHHH
Confidence            99999999875421 1          1111111    1    1346777788888999987664  48999999999999


Q ss_pred             HHhCCCCeeEEEEe
Q 023571          265 IETNKATGKVVIHP  278 (280)
Q Consensus       265 l~~~~~~gkvVv~~  278 (280)
                      +++++..||+||++
T Consensus       317 ~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          317 ILQNRIQGRVIVKL  330 (330)
T ss_dssp             TTTTCCSSEEEECC
T ss_pred             HHcCCCCCeEEEeC
Confidence            99998889999864

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=99.92  E-value=6.6e-24  Score=191.45  Aligned_cols=193  Identities=24%  Similarity=0.379  Sum_probs=155.3

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCC-CCCCCCCCcccCceE------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF-KATDSPLPTVPGYDV------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~-~~~~~~~P~i~G~e~------------  150 (280)
                      |||+++.++|.++.++++ +.|.|+|++|||+|||.++|||++|++++.|.+ +.....+|.++|||+            
T Consensus         2 Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~   80 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWE-EVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVT   80 (333)
T ss_dssp             CEEEEESSCSSGGGEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCC
T ss_pred             cEEEEEcccCCcceeEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCC
Confidence            899999998887789999 999999999999999999999999999999876 211135789999999            


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        81 ~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~  160 (333)
T 1wly_A           81 DFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGH  160 (333)
T ss_dssp             SCCTTCEEEECSSSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHH
T ss_pred             CCCCCCEEEEecCCCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHH
Confidence                                                                                            


Q ss_pred             --------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEE
Q 023571          151 --------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTV  208 (280)
Q Consensus       151 --------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~v  208 (280)
                                    +++.+++++++++++|++.++|+.++++.+.      .+++|++|||+|  .++.++++|+++|++
T Consensus       161 ~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~i  240 (333)
T 1wly_A          161 IMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMC  240 (333)
T ss_dssp             HHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCTTTHHHHHHTEEEEEEE
T ss_pred             HHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcHHHHHHHHHhhccCCEE
Confidence                          5667778899999999999999988776543      247999999998  689999999999999


Q ss_pred             EEEcCCCC-CCc-------------eEEEEe-----ec----HHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHH
Q 023571          209 VALTGAVT-PPG-------------FRFVVT-----SN----GEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYI  265 (280)
Q Consensus       209 V~~g~~~~-~~~-------------~~~~~~-----~~----~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l  265 (280)
                      +.+|.... ...             +.+...     ..    ++.++++++++++|++++.+.  ++|+|+++.+|++.+
T Consensus       241 v~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~--~~~~l~~~~~A~~~~  318 (333)
T 1wly_A          241 AAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSSVA--KTFPLREAAAAHKYM  318 (333)
T ss_dssp             EECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCCCEE--EEEEGGGHHHHHHHH
T ss_pred             EEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcCCCcc--eEEeHHHHHHHHHHH
Confidence            99986542 111             111100     01    357899999999999987665  499999999999999


Q ss_pred             HhCCCCeeEEEEeC
Q 023571          266 ETNKATGKVVIHPI  279 (280)
Q Consensus       266 ~~~~~~gkvVv~~~  279 (280)
                      ++++..||+||++.
T Consensus       319 ~~~~~~gKvvi~~~  332 (333)
T 1wly_A          319 GGRQTIGSIVLLPQ  332 (333)
T ss_dssp             HHCSCCSEEEEETT
T ss_pred             HcCCCceEEEEEeC
Confidence            99988899999875

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=99.92  E-value=8.4e-24  Score=190.93  Aligned_cols=191  Identities=22%  Similarity=0.275  Sum_probs=155.8

Q ss_pred             cceeEEEEcc--cC--CCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCce----E---
Q 023571           82 SEMKAWLYGE--YG--GVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYD----V---  150 (280)
Q Consensus        82 ~~mka~~~~~--~g--~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e----~---  150 (280)
                      .+|||+++..  .|  .++.++++ +.|.|+|++|||||||+++|||++|++.+.+...   ...|.++|||    +   
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~---~~~p~~~G~e~g~~~~G~   81 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFV-ETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS---YIPPVGIGEVMRALGVGK   81 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC---SSCCCCTTSBCCCEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEE-eccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc---cCCCCCCCcccCCceEEE
Confidence            4699999986  33  35779999 9999999999999999999999999998887442   3457777777    3   


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        82 V~~~~v~~~~vGdrV~~~G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~  161 (336)
T 4b7c_A           82 VLVSKHPGFQAGDYVNGALGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGA  161 (336)
T ss_dssp             EEEECSTTCCTTCEEEEECCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSH
T ss_pred             EEecCCCCCCCCCEEeccCCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCH
Confidence                                                                                            


Q ss_pred             -----------------EEecChhhHHHH-HhCCCCEEEeCCCCCcccc-----CCCccEEEeCCC--CHHHHHhccccC
Q 023571          151 -----------------AATSSTRNLEFL-KSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG--QCDRAVKAIKEG  205 (280)
Q Consensus       151 -----------------~~~~s~~~~~~l-~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g--~~~~~l~~l~~g  205 (280)
                                       +++.++++++++ +++|+++++|+.++++.+.     .+++|++|||+|  .+..++++|+++
T Consensus       162 iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~  241 (336)
T 4b7c_A          162 VGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFK  241 (336)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCcchHHHHHHHHhhC
Confidence                             566788999999 8999999999998876553     258999999999  688999999999


Q ss_pred             CEEEEEcCCC-----C----CC--------ceEEEEee-------cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHH
Q 023571          206 GTVVALTGAV-----T----PP--------GFRFVVTS-------NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEA  261 (280)
Q Consensus       206 G~vV~~g~~~-----~----~~--------~~~~~~~~-------~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A  261 (280)
                      |+++.+|...     .    +.        .+.+....       ..+.++++++++++|++++.+..  .|+|+++.+|
T Consensus       242 G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~--~~~l~~~~~A  319 (336)
T 4b7c_A          242 ARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDI--VEGLETFPET  319 (336)
T ss_dssp             EEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEE--EECGGGHHHH
T ss_pred             CEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccceee--ecCHHHHHHH
Confidence            9999998654     1    11        11111111       24789999999999999988775  6899999999


Q ss_pred             HHHHHhCCCCeeEEEEe
Q 023571          262 FSYIETNKATGKVVIHP  278 (280)
Q Consensus       262 ~~~l~~~~~~gkvVv~~  278 (280)
                      ++.+++++..||+||++
T Consensus       320 ~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          320 LLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             HHHHHTTCCCSEEEEEC
T ss_pred             HHHHHcCCCCceEEEeC
Confidence            99999999999999975

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=99.92  E-value=1.4e-23  Score=192.20  Aligned_cols=193  Identities=21%  Similarity=0.241  Sum_probs=147.0

Q ss_pred             CcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE--------
Q 023571           79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV--------  150 (280)
Q Consensus        79 ~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~--------  150 (280)
                      ++|.+|||+++..++.   ++++++.|.|+|++|||||||.++|||++|++++.|..     .+|.++|||+        
T Consensus         7 ~~p~~mkA~v~~~~~~---l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~-----~~p~v~G~e~~G~V~~vG   78 (371)
T 3gqv_A            7 IPPPQQTALTVNDHDE---VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFA-----TPWAFLGTDYAGTVVAVG   78 (371)
T ss_dssp             CCCSCEEEEEECTTSC---EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC-----C-----CTTSCCCSEEEEEEEEEC
T ss_pred             CCchhceeEEEcCCCc---eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcCC-----CCCccCccccEEEEEEeC
Confidence            5889999999987743   77764789999999999999999999999999886622     3467777777        


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~  158 (371)
T 3gqv_A           79 SDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQ  158 (371)
T ss_dssp             TTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSS
T ss_pred             CCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCcccc
Confidence                                                                                            


Q ss_pred             ----------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC-----CCccEEEeC
Q 023571          151 ----------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP-----EKFDVVYDA  191 (280)
Q Consensus       151 ----------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~-----~g~DvV~d~  191 (280)
                                                        +++.+++|+++++++|++++||++++++.+.+     +++|+||||
T Consensus       159 ~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~  238 (371)
T 3gqv_A          159 PPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDC  238 (371)
T ss_dssp             CCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEES
T ss_pred             ccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEEC
Confidence                                              22346778999999999999999998876542     469999999


Q ss_pred             CC---CHHHHHhcc-ccCCEEEEEcCCCC----CCceEEEE-------------------eec-------HHHHHHHHHH
Q 023571          192 IG---QCDRAVKAI-KEGGTVVALTGAVT----PPGFRFVV-------------------TSN-------GEVLKKLNPY  237 (280)
Q Consensus       192 ~g---~~~~~l~~l-~~gG~vV~~g~~~~----~~~~~~~~-------------------~~~-------~~~l~~l~~l  237 (280)
                      +|   .++.++++| +++|+++.+|....    ...+....                   ...       .+.+++++++
T Consensus       239 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l  318 (371)
T 3gqv_A          239 ITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQL  318 (371)
T ss_dssp             SCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHH
Confidence            99   378999999 59999999986542    11121110                   001       1345688899


Q ss_pred             HHCCCceeecCCCcccchhhHHHHHHHHHhCCCCe-eEEEEeC
Q 023571          238 LESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATG-KVVIHPI  279 (280)
Q Consensus       238 l~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~g-kvVv~~~  279 (280)
                      +++|++++....++.|+|+++.+|++.+++++..| |+|+++.
T Consensus       319 ~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~  361 (371)
T 3gqv_A          319 VEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLE  361 (371)
T ss_dssp             HHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEEC
T ss_pred             HHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeC
Confidence            99999998776545699999999999999998887 5666653

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=99.91  E-value=1.1e-24  Score=197.76  Aligned_cols=195  Identities=23%  Similarity=0.239  Sum_probs=154.4

Q ss_pred             ccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcC-CCCCCCCCCCcccCceE---------
Q 023571           81 PSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQG-KFKATDSPLPTVPGYDV---------  150 (280)
Q Consensus        81 p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g-~~~~~~~~~P~i~G~e~---------  150 (280)
                      +.+|||+++..++.  .++++ +.|.|+|++|||||||.++|||++|++.+.| .++.....+|.++|||+         
T Consensus         2 m~~mka~~~~~~g~--~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~   78 (348)
T 2d8a_A            2 SEKMVAIMKTKPGY--GAELV-EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGP   78 (348)
T ss_dssp             -CEEEEEEECSSSS--SCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECT
T ss_pred             CCcceEEEEECCCC--CEEEE-ECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECC
Confidence            45799999998874  48888 9999999999999999999999999999998 44200135788999998         


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~  158 (348)
T 2d8a_A           79 GVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAV  158 (348)
T ss_dssp             TCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHHHHHHHH
T ss_pred             CCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhhHHHHHH
Confidence                                                                                            


Q ss_pred             --------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC------CCcc
Q 023571          151 --------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------EKFD  186 (280)
Q Consensus       151 --------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------~g~D  186 (280)
                                                            +++.+++++++++++|+++++|++++++.+.+      +++|
T Consensus       159 ~~l~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D  238 (348)
T 2d8a_A          159 DTVLAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVD  238 (348)
T ss_dssp             HHHTTSCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEE
T ss_pred             HHHHhcCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCC
Confidence                                                  45667889999999999999999887765432      4799


Q ss_pred             EEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCce-----------EEEE--eec-HHHHHHHHHHHHCCCceeecCC
Q 023571          187 VVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF-----------RFVV--TSN-GEVLKKLNPYLESGKVKPIIDP  249 (280)
Q Consensus       187 vV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~-----------~~~~--~~~-~~~l~~l~~ll~~G~l~~~~~~  249 (280)
                      +||||+|   .++.++++|+++|+++.+|.......+           .+..  ... .+.++++++++++|+++.....
T Consensus       239 ~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~~~~i  318 (348)
T 2d8a_A          239 VFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDPII  318 (348)
T ss_dssp             EEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHHHTCCCCTTTE
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHHcCCCChHHhh
Confidence            9999998   368999999999999999875432111           1111  123 7889999999999997543333


Q ss_pred             Ccccc-hhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          250 KGPFP-FSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       250 ~~~~~-l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      +++|+ |+++++|++.+++ +..||+||+++
T Consensus       319 ~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          319 THKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             EEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             eeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence            35899 9999999999977 56799999874

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=99.91  E-value=9.6e-24  Score=198.36  Aligned_cols=198  Identities=20%  Similarity=0.298  Sum_probs=157.5

Q ss_pred             CcccceeEEEEcccC------------C-CccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCC---------
Q 023571           79 TVPSEMKAWLYGEYG------------G-VDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFK---------  136 (280)
Q Consensus        79 ~~p~~mka~~~~~~g------------~-~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~---------  136 (280)
                      ++|.+|||+++..++            + .+.++++ +.|.|+|++|||||||.++|||++|++...+...         
T Consensus        26 ~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~  104 (456)
T 3krt_A           26 PLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLD-DVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERY  104 (456)
T ss_dssp             CCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHH
T ss_pred             CCCcceEEEEEeccccccccccccccCCCCCCcEEE-EccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhc
Confidence            689999999999862            1 2568999 9999999999999999999999999987543210         


Q ss_pred             ----C--CCCCCC-cccCceE-----------------------------------------------------------
Q 023571          137 ----A--TDSPLP-TVPGYDV-----------------------------------------------------------  150 (280)
Q Consensus       137 ----~--~~~~~P-~i~G~e~-----------------------------------------------------------  150 (280)
                          .  ....+| .++|||+                                                           
T Consensus       105 g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey  184 (456)
T 3krt_A          105 GRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEI  184 (456)
T ss_dssp             HTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSE
T ss_pred             cccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccce
Confidence                0  012456 5888887                                                           


Q ss_pred             -------------------------------------------------------------------------EEecChh
Q 023571          151 -------------------------------------------------------------------------AATSSTR  157 (280)
Q Consensus       151 -------------------------------------------------------------------------~~~~s~~  157 (280)
                                                                                               +++.+++
T Consensus       185 ~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~  264 (456)
T 3krt_A          185 ALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQ  264 (456)
T ss_dssp             EEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             EEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHH
Confidence                                                                                     5668899


Q ss_pred             hHHHHHhCCCCEEEeCCCCCcc-----------------cc------CCCccEEEeCCC--CHHHHHhccccCCEEEEEc
Q 023571          158 NLEFLKSLGADLAIDYTKDNFE-----------------DL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALT  212 (280)
Q Consensus       158 ~~~~l~~lga~~vid~~~~~~~-----------------~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g  212 (280)
                      |+++++++|++.+||+.++++.                 +.      .+++|+||||+|  .+..++++|+++|+++.+|
T Consensus       265 ~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G  344 (456)
T 3krt_A          265 KAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCA  344 (456)
T ss_dssp             HHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEEEESC
T ss_pred             HHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEEEEEe
Confidence            9999999999999999987652                 21      258999999999  6899999999999999998


Q ss_pred             CCCCCC-ceE----------E--EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          213 GAVTPP-GFR----------F--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       213 ~~~~~~-~~~----------~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      ...... .+.          +  ......+.+.++++++++|++++.+.  ++|+|+++.+|++.+.+++..||+||.+.
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~--~~~~l~~~~eA~~~l~~~~~~GKvvv~~~  422 (456)
T 3krt_A          345 STSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLS--KVYSLEDTGQAAYDVHRNLHQGKVGVLCL  422 (456)
T ss_dssp             CTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCEE--EEEEGGGHHHHHHHHHTTCSSSEEEEESS
T ss_pred             cCCCcccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCccccee--EEEcHHHHHHHHHHHHhCCCCCcEEEEeC
Confidence            765321 111          1  11224567778999999999997765  49999999999999999999999999863

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=99.91  E-value=4.8e-24  Score=189.85  Aligned_cols=188  Identities=25%  Similarity=0.409  Sum_probs=153.1

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      |||+++.+++.+.  .++ +.|.|+|++|||+|||.++|||++|++.+.|.++. ...+|.++|||+             
T Consensus         1 Mka~~~~~~g~~~--~l~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~i~G~e~~G~V~GdrV~~~~   76 (302)
T 1iz0_A            1 MKAWVLKRLGGPL--ELV-DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT-RLHPPFIPGMEVVGVVEGRRYAALV   76 (302)
T ss_dssp             CEEEEECSTTSCE--EEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS-CCCSSBCCCCEEEEEETTEEEEEEC
T ss_pred             CeEEEEcCCCCch--heE-ECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCCcccceEEEEEECcEEEEec
Confidence            8999999888763  456 88999999999999999999999999999997752 246799999997             


Q ss_pred             ------------------------------------------------------------------------------EE
Q 023571          151 ------------------------------------------------------------------------------AA  152 (280)
Q Consensus       151 ------------------------------------------------------------------------------~~  152 (280)
                                                                                                    ++
T Consensus        77 ~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~  156 (302)
T 1iz0_A           77 PQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAA  156 (302)
T ss_dssp             SSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence                                                                                          56


Q ss_pred             ecChhhHHHHHhCCCCEEEeCCC-CCccccCCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCCC---C--------
Q 023571          153 TSSTRNLEFLKSLGADLAIDYTK-DNFEDLPEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVTP---P--------  218 (280)
Q Consensus       153 ~~s~~~~~~l~~lga~~vid~~~-~~~~~~~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~~---~--------  218 (280)
                      +.+++++++++++|+++++|+++ +++.+..+++|+||| +|  .++.++++++++|+++.+|.....   .        
T Consensus       157 ~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  235 (302)
T 1iz0_A          157 ASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRGKEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRR  235 (302)
T ss_dssp             ESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSCTTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHT
T ss_pred             eCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCHHHHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhC
Confidence            67789999999999999999987 677666689999999 98  689999999999999999865421   1        


Q ss_pred             ceEEEEe------ecHHHHHHHHH---HHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          219 GFRFVVT------SNGEVLKKLNP---YLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       219 ~~~~~~~------~~~~~l~~l~~---ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      .+.+...      ...+.++++++   ++++|++++.+.  ++|+|+++.+|++.+++++..||+|+++
T Consensus       236 ~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~--~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          236 NLAVLGFWLTPLLREGALVEEALGFLLPRLGRELRPVVG--PVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             TCEEEECCHHHHTTCHHHHHHHHHHHGGGBTTTBCCCEE--EEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             CCeEEEEeccchhhhHHHHHHHHhhhHHHHcCCcccccc--eEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            1112111      14578999999   999999987765  4999999999999999888889999874

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=99.91  E-value=1.9e-24  Score=196.85  Aligned_cols=194  Identities=18%  Similarity=0.195  Sum_probs=150.7

Q ss_pred             cceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCC-CCCCCCCCCcccCceE----------
Q 023571           82 SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGK-FKATDSPLPTVPGYDV----------  150 (280)
Q Consensus        82 ~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~-~~~~~~~~P~i~G~e~----------  150 (280)
                      ++|||+++.+++   .++++ +.|.|+|++|||+|||.++|||++|++.+.|. ++.....+|.++|||+          
T Consensus         6 ~~mka~~~~~~~---~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~   81 (356)
T 1pl8_A            6 PNNLSLVVHGPG---DLRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSS   81 (356)
T ss_dssp             CCCEEEEEEETT---EEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTT
T ss_pred             cCceEEEEecCC---cEEEE-EccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCC
Confidence            359999998753   48899 99999999999999999999999999988743 2111235688889888          


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        82 V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~~~~~ta~  161 (356)
T 1pl8_A           82 VKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGI  161 (356)
T ss_dssp             CCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhhchHHHHH
Confidence                                                                                            


Q ss_pred             ---------------------------------------EEecChhhHHHHHhCCCCEEEeCCC---CCccccC-----C
Q 023571          151 ---------------------------------------AATSSTRNLEFLKSLGADLAIDYTK---DNFEDLP-----E  183 (280)
Q Consensus       151 ---------------------------------------~~~~s~~~~~~l~~lga~~vid~~~---~~~~~~~-----~  183 (280)
                                                             +++.+++++++++++|+++++|++.   +++.+.+     +
T Consensus       162 ~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~  241 (356)
T 1pl8_A          162 HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGC  241 (356)
T ss_dssp             HHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTS
T ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCC
Confidence                                                   4557888999999999999999982   4443321     5


Q ss_pred             CccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCce----------EEEE-eecHHHHHHHHHHHHCCCceeecCC
Q 023571          184 KFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF----------RFVV-TSNGEVLKKLNPYLESGKVKPIIDP  249 (280)
Q Consensus       184 g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~----------~~~~-~~~~~~l~~l~~ll~~G~l~~~~~~  249 (280)
                      ++|+||||+|   .++.++++|+++|+++.+|.......+          .+.. ....+.++++++++++|+++.....
T Consensus       242 g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i  321 (356)
T 1pl8_A          242 KPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLV  321 (356)
T ss_dssp             CCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCHHHHHHHHHTTSCCCGGGE
T ss_pred             CCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEecccHHHHHHHHHHHHcCCCChHHhe
Confidence            8999999998   378999999999999999864422111          1111 1124568999999999998643333


Q ss_pred             CcccchhhHHHHHHHHHhCCCCeeEEEEeCC
Q 023571          250 KGPFPFSQVVEAFSYIETNKATGKVVIHPIP  280 (280)
Q Consensus       250 ~~~~~l~~v~~A~~~l~~~~~~gkvVv~~~~  280 (280)
                      +++|+|+++.+|++.++++ ..||+||++++
T Consensus       322 ~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~  351 (356)
T 1pl8_A          322 THRFPLEKALEAFETFKKG-LGLKIMLKCDP  351 (356)
T ss_dssp             EEEEEGGGHHHHHHHHHTT-CCSEEEEECCT
T ss_pred             EEEecHHHHHHHHHHHhCC-CceEEEEeCCC
Confidence            3589999999999999988 77999999853

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=99.91  E-value=4.7e-24  Score=194.56  Aligned_cols=191  Identities=18%  Similarity=0.231  Sum_probs=151.9

Q ss_pred             cccceeEEEEcccCCCccEEEeee--ccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcc------------
Q 023571           80 VPSEMKAWLYGEYGGVDVLKFDEK--VTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTV------------  145 (280)
Q Consensus        80 ~p~~mka~~~~~~g~~~~l~l~~~--~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i------------  145 (280)
                      +|.+|||+++..++.+  ++++ +  .|.|+|++|||||||.++|||++|++.+.|.++.  ..+|.+            
T Consensus         3 ~p~~mka~~~~~~~~~--l~~~-~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~p~v~GhE~~G~V~~v   77 (360)
T 1piw_A            3 YPEKFEGIAIQSHEDW--KNPK-KTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN--MKMPLVVGHEIVGKVVKL   77 (360)
T ss_dssp             TTTCEEEEEECCSSST--TSCE-EEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSC--CCSSEECCCCEEEEEEEE
T ss_pred             CChheEEEEEecCCCC--eeEE-eccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCC--CCCCcccCcCceEEEEEe
Confidence            6778999999988754  6677 7  8999999999999999999999999999886531  011111            


Q ss_pred             -------------------------------------------c------Cc--eE------------------------
Q 023571          146 -------------------------------------------P------GY--DV------------------------  150 (280)
Q Consensus       146 -------------------------------------------~------G~--e~------------------------  150 (280)
                                                                 +      |.  .+                        
T Consensus        78 G~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~  157 (360)
T 1piw_A           78 GPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHL  157 (360)
T ss_dssp             CTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHH
T ss_pred             CCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHH
Confidence                                                       1      21  11                        


Q ss_pred             --------------------------------------------------EEecChhhHHHHHhCCCCEEEeCCCC-Ccc
Q 023571          151 --------------------------------------------------AATSSTRNLEFLKSLGADLAIDYTKD-NFE  179 (280)
Q Consensus       151 --------------------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~-~~~  179 (280)
                                                                        +++.+++++++++++|+++++|++++ ++.
T Consensus       158 aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~  237 (360)
T 1piw_A          158 AAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWG  237 (360)
T ss_dssp             HGGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHH
T ss_pred             hhhhhhhHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHH
Confidence                                                              55668899999999999999999887 765


Q ss_pred             ccC-CCccEEEeCCCC-----HHHHHhccccCCEEEEEcCCCCCC-ceEE------------EEeecHHHHHHHHHHHHC
Q 023571          180 DLP-EKFDVVYDAIGQ-----CDRAVKAIKEGGTVVALTGAVTPP-GFRF------------VVTSNGEVLKKLNPYLES  240 (280)
Q Consensus       180 ~~~-~g~DvV~d~~g~-----~~~~l~~l~~gG~vV~~g~~~~~~-~~~~------------~~~~~~~~l~~l~~ll~~  240 (280)
                      +.. +++|+||||+|.     ++.++++|+++|+++.+|.... . .++.            ......+.++++++++++
T Consensus       238 ~~~~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~  316 (360)
T 1piw_A          238 EKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSE  316 (360)
T ss_dssp             HHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCCHHHHHHHHHHHHH
T ss_pred             HHhhcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHh
Confidence            544 589999999864     6789999999999999987653 2 2221            111246889999999999


Q ss_pred             CCceeecCCCcccchhh--HHHHHHHHHhCCCCeeEEEEeC
Q 023571          241 GKVKPIIDPKGPFPFSQ--VVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       241 G~l~~~~~~~~~~~l~~--v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      |++++.+   ++|+|++  +++|++.+++++..||+||+++
T Consensus       317 g~l~~~i---~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~  354 (360)
T 1piw_A          317 KDIKIWV---ETLPVGEAGVHEAFERMEKGDVRYRFTLVGY  354 (360)
T ss_dssp             TTCCCCE---EEEESSHHHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             CCCcceE---EEEeccHhHHHHHHHHHHCCCCceEEEEecC
Confidence            9998775   3899999  9999999999988899999874

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=99.91  E-value=8.9e-24  Score=190.15  Aligned_cols=192  Identities=18%  Similarity=0.255  Sum_probs=151.3

Q ss_pred             cceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-----------
Q 023571           82 SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-----------  150 (280)
Q Consensus        82 ~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-----------  150 (280)
                      .+|||+++.+++.++.++++ +.|.|+|++|||+|||.++|||++|++.+.|.++ ....+|.++|||+           
T Consensus         2 ~~mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~p~v~G~E~~G~V~~~~v~~   79 (328)
T 1xa0_A            2 SAFQAFVVNKTETEFTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGK-IVKTYPFVPGIDLAGVVVSSQHPR   79 (328)
T ss_dssp             CEEEEEEEEEETTEEEEEEE-EEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGS-SCCSSSBCCCSEEEEEEEECCSSS
T ss_pred             CcceEEEEecCCCcceeEEE-eccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCC-CCCCCCcccCcceEEEEEecCCCC
Confidence            46999999998866568899 9999999999999999999999999999998764 2346789999998           


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        80 ~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~  159 (328)
T 1xa0_A           80 FREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGAT  159 (328)
T ss_dssp             CCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTT
T ss_pred             CCCCCEEEEccccCCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCC
Confidence                                                                                            


Q ss_pred             -------------------EEecChhhHHHHHhCCCCEEEeCCCCC--cccc--CCCccEEEeCCC--CHHHHHhccccC
Q 023571          151 -------------------AATSSTRNLEFLKSLGADLAIDYTKDN--FEDL--PEKFDVVYDAIG--QCDRAVKAIKEG  205 (280)
Q Consensus       151 -------------------~~~~s~~~~~~l~~lga~~vid~~~~~--~~~~--~~g~DvV~d~~g--~~~~~l~~l~~g  205 (280)
                                         +++.+++++++++++|+++++|+++.+  ....  .+++|+||||+|  .++.++++++++
T Consensus       160 G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~  239 (328)
T 1xa0_A          160 GGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYG  239 (328)
T ss_dssp             SHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTTTTHHHHHHTEEEE
T ss_pred             CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcHHHHHHHHHhhccC
Confidence                               567778999999999999999988653  1111  257999999998  689999999999


Q ss_pred             CEEEEEcCCCC-CC----------ceEEEEe----e----cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHH
Q 023571          206 GTVVALTGAVT-PP----------GFRFVVT----S----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIE  266 (280)
Q Consensus       206 G~vV~~g~~~~-~~----------~~~~~~~----~----~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~  266 (280)
                      |+++.+|.... ..          .+.+...    .    ..+.++++.+++++| +++. .  ++|+|+++++|++.++
T Consensus       240 G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~~~-~--~~~~l~~~~~A~~~~~  315 (328)
T 1xa0_A          240 GAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-LERI-A--QEISLAELPQALKRIL  315 (328)
T ss_dssp             EEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-HHHH-E--EEEEGGGHHHHHHHHH
T ss_pred             CEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-Ccee-e--eEeCHHHHHHHHHHHH
Confidence            99999986542 11          1112111    1    135677788888888 8763 2  5999999999999999


Q ss_pred             hCCCCeeEEEEeC
Q 023571          267 TNKATGKVVIHPI  279 (280)
Q Consensus       267 ~~~~~gkvVv~~~  279 (280)
                      +++..||+||+++
T Consensus       316 ~~~~~gKvvv~~~  328 (328)
T 1xa0_A          316 RGELRGRTVVRLA  328 (328)
T ss_dssp             HTCCCSEEEEECC
T ss_pred             cCCCCCeEEEEeC
Confidence            9988899999863

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=99.91  E-value=6.7e-24  Score=198.84  Aligned_cols=198  Identities=26%  Similarity=0.385  Sum_probs=156.9

Q ss_pred             CCcccceeEEEEcccC----------C-CccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHc--------------
Q 023571           78 GTVPSEMKAWLYGEYG----------G-VDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQ--------------  132 (280)
Q Consensus        78 ~~~p~~mka~~~~~~g----------~-~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~--------------  132 (280)
                      .++|.+|||+++..++          . .+.++++ +.|.|+|++|||+|||.++|||++|++...              
T Consensus        19 ~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~-e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~   97 (447)
T 4a0s_A           19 APVPDTYLALHLRAEDADMFKGVADKDVRKSLRLG-EVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNA   97 (447)
T ss_dssp             SCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHH
T ss_pred             cCCChhheeeeeeccccccccccccCCCCCCceEE-eccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhc
Confidence            3689999999999887          1 1458999 999999999999999999999999986432              


Q ss_pred             --CCCCCCCCCCC-cccCceE-----------------------------------------------------------
Q 023571          133 --GKFKATDSPLP-TVPGYDV-----------------------------------------------------------  150 (280)
Q Consensus       133 --g~~~~~~~~~P-~i~G~e~-----------------------------------------------------------  150 (280)
                        |.++ ....+| .++|||+                                                           
T Consensus        98 ~~g~~~-~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey  176 (447)
T 4a0s_A           98 RQGGWA-TRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEY  176 (447)
T ss_dssp             TTCGGG-GGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSE
T ss_pred             ccCccc-cccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeee
Confidence              2221 112456 6889988                                                           


Q ss_pred             -------------------------------------------------------------------------EEecChh
Q 023571          151 -------------------------------------------------------------------------AATSSTR  157 (280)
Q Consensus       151 -------------------------------------------------------------------------~~~~s~~  157 (280)
                                                                                               +++.+++
T Consensus       177 ~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~  256 (447)
T 4a0s_A          177 GVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQ  256 (447)
T ss_dssp             EEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             eecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence                                                                                     5668899


Q ss_pred             hHHHHHhCCCCEEEeCCCCCc------------------ccc-----CCCccEEEeCCC--CHHHHHhccccCCEEEEEc
Q 023571          158 NLEFLKSLGADLAIDYTKDNF------------------EDL-----PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALT  212 (280)
Q Consensus       158 ~~~~l~~lga~~vid~~~~~~------------------~~~-----~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g  212 (280)
                      ++++++++|+++++|+.+.++                  .+.     .+++|+||||+|  .++.++++++++|++|.+|
T Consensus       257 ~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G  336 (447)
T 4a0s_A          257 KEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCG  336 (447)
T ss_dssp             HHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHHHHHHHHHSCTTCEEEESC
T ss_pred             HHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchHHHHHHHHHhcCCEEEEEe
Confidence            999999999999999876553                  111     358999999999  5889999999999999998


Q ss_pred             CCCCCC-ceE----------E--EEeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          213 GAVTPP-GFR----------F--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       213 ~~~~~~-~~~----------~--~~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      ...... .+.          +  ......+.+.++++++++|++++.+.  ++|+|+++++|++.+.+++..||+||.+.
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~--~~~~l~~~~~A~~~~~~~~~~GKvvv~~~  414 (447)
T 4a0s_A          337 SSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVVPAMS--AVYPLAEAAEACRVVQTSRQVGKVAVLCM  414 (447)
T ss_dssp             CTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCEE--EEEEGGGHHHHHHHHHTTCCSSEEEEESS
T ss_pred             cCCCcccccCHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCccccee--EEEcHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            765321 111          1  11224577889999999999988665  59999999999999999999999999873

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=99.91  E-value=2.5e-24  Score=196.43  Aligned_cols=197  Identities=15%  Similarity=0.122  Sum_probs=152.1

Q ss_pred             CcccceeEEEEcccCCCccEEEeeeccCC--------CCCCCcEEEEEEEEecChHHHHHHcCC-CCCCCCCCCcccCce
Q 023571           79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVP--------QVKEDQVLIKVVAAALNPVDGKRRQGK-FKATDSPLPTVPGYD  149 (280)
Q Consensus        79 ~~p~~mka~~~~~~g~~~~l~l~~~~~~p--------~~~~~eVlVkV~aagl~~~D~~~~~g~-~~~~~~~~P~i~G~e  149 (280)
                      ++|.+|||+++..+   +.++++ +.|.|        +|++|||||||+++|||++|++++.|. ++.....+|.++|||
T Consensus         4 ~~~~~mka~~~~~~---~~l~~~-~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E   79 (363)
T 3m6i_A            4 SASKTNIGVFTNPQ---HDLWIS-EASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHE   79 (363)
T ss_dssp             -CCSCCEEEEECTT---CCEEEE-ECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCE
T ss_pred             CCcccceeEEEeCC---CcEEEE-EecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcc
Confidence            46788999999865   348999 99999        999999999999999999999988733 222234678999999


Q ss_pred             E-------------------------------------------------------------------------------
Q 023571          150 V-------------------------------------------------------------------------------  150 (280)
Q Consensus       150 ~-------------------------------------------------------------------------------  150 (280)
                      +                                                                               
T Consensus        80 ~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~s~~~a  159 (363)
T 3m6i_A           80 SAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGNMSYENG  159 (363)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTTCCHHHH
T ss_pred             eEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCCCCHHHH
Confidence            8                                                                               


Q ss_pred             -------------------------------------------------EEecChhhHHHHHhCCCCEEEeCCC-----C
Q 023571          151 -------------------------------------------------AATSSTRNLEFLKSLGADLAIDYTK-----D  176 (280)
Q Consensus       151 -------------------------------------------------~~~~s~~~~~~l~~lga~~vid~~~-----~  176 (280)
                                                                       +++.+++|+++++++ ++++++|..     +
T Consensus       160 a~~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~  238 (363)
T 3m6i_A          160 AMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAE  238 (363)
T ss_dssp             HHHHHHHHHHHHHHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHH
T ss_pred             HhhhHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchH
Confidence                                                             456788999999999 766776642     2


Q ss_pred             Ccccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCceE----------EEE-eecHHHHHHHHH
Q 023571          177 NFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGFR----------FVV-TSNGEVLKKLNP  236 (280)
Q Consensus       177 ~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~~----------~~~-~~~~~~l~~l~~  236 (280)
                      ++.+.      .+++|+||||+|   .++.++++|+++|+++.+|.......++          +.. ....+.++++++
T Consensus       239 ~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  318 (363)
T 3m6i_A          239 ESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIR  318 (363)
T ss_dssp             HHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSCSSCHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCCHHHHHHHHH
Confidence            33332      358999999999   3789999999999999998765332221          111 112567899999


Q ss_pred             HHHCCCceeecCCCcccchhhHHHHHHHHHhC-CCCeeEEEEeCC
Q 023571          237 YLESGKVKPIIDPKGPFPFSQVVEAFSYIETN-KATGKVVIHPIP  280 (280)
Q Consensus       237 ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~-~~~gkvVv~~~~  280 (280)
                      ++++|+++.....+++|+|+++.+|++.++++ ...+|+||++++
T Consensus       319 l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          319 LVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             HHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             HHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence            99999996543333589999999999999998 567999998763

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=99.91  E-value=1.5e-23  Score=192.01  Aligned_cols=194  Identities=21%  Similarity=0.236  Sum_probs=148.7

Q ss_pred             CcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCce---------
Q 023571           79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYD---------  149 (280)
Q Consensus        79 ~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e---------  149 (280)
                      .+|.+|||+++..++.+  ++++ +.|.|+|++|||+|||.++|||++|++++.|.++.  ..+|.++|||         
T Consensus         2 ~~p~~mkA~~~~~~~~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~P~v~GhE~~G~V~~vG   76 (373)
T 2fzw_A            2 NEVIKCKAAVAWEAGKP--LSIE-EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPE--GCFPVILGHLGAGIVESVG   76 (373)
T ss_dssp             CCCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTT--CCSSBCCCCEEEEEEEEEC
T ss_pred             CCccceEEEEEecCCCC--cEEE-EeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCC--CCCCccccccccEEEEEEC
Confidence            35788999999887754  7888 89999999999999999999999999999887541  1223222211         


Q ss_pred             ------------------------------------------------------------------E-------------
Q 023571          150 ------------------------------------------------------------------V-------------  150 (280)
Q Consensus       150 ------------------------------------------------------------------~-------------  150 (280)
                                                                                        +             
T Consensus        77 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  156 (373)
T 2fzw_A           77 EGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISV  156 (373)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             CCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhhe
Confidence                                                                              2             


Q ss_pred             ---------------------------------------------------------------EEecChhhHHHHHhCCC
Q 023571          151 ---------------------------------------------------------------AATSSTRNLEFLKSLGA  167 (280)
Q Consensus       151 ---------------------------------------------------------------~~~~s~~~~~~l~~lga  167 (280)
                                                                                     +++.+++++++++++|+
T Consensus       157 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa  236 (373)
T 2fzw_A          157 AKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA  236 (373)
T ss_dssp             EECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC
T ss_pred             EECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC
Confidence                                                                           44568999999999999


Q ss_pred             CEEEeCCC--CCccccC-----CCccEEEeCCC---CHHHHHhccccC-CEEEEEcCCCCCCce-----------EEEEe
Q 023571          168 DLAIDYTK--DNFEDLP-----EKFDVVYDAIG---QCDRAVKAIKEG-GTVVALTGAVTPPGF-----------RFVVT  225 (280)
Q Consensus       168 ~~vid~~~--~~~~~~~-----~g~DvV~d~~g---~~~~~l~~l~~g-G~vV~~g~~~~~~~~-----------~~~~~  225 (280)
                      ++++|+++  +++.+.+     +++|+||||+|   .++.++++|+++ |+++.+|.......+           .+...
T Consensus       237 ~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~  316 (373)
T 2fzw_A          237 TECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGT  316 (373)
T ss_dssp             SEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEEC
T ss_pred             ceEeccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCCEEEEe
Confidence            99999875  4554422     48999999998   378999999999 999999865421111           11111


Q ss_pred             e-----cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          226 S-----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       226 ~-----~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      .     ..++++++++++++|++++....+++|+|+++.+|++.+++++. +|+||++
T Consensus       317 ~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          317 AFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             SGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             ccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            1     25789999999999999854333358999999999999998876 7999874

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=99.91  E-value=2.5e-23  Score=190.72  Aligned_cols=127  Identities=17%  Similarity=0.188  Sum_probs=97.3

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCC--CCccccC-----CCccEEEeCCC---CHHHHHhccccC-CEEEEEcCCCCCCc
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTK--DNFEDLP-----EKFDVVYDAIG---QCDRAVKAIKEG-GTVVALTGAVTPPG  219 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~--~~~~~~~-----~g~DvV~d~~g---~~~~~l~~l~~g-G~vV~~g~~~~~~~  219 (280)
                      +++.+++++++++++|+++++|+++  +++.+.+     +++|+||||+|   .++.++++|+++ |+++.+|.......
T Consensus       225 ~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~  304 (376)
T 1e3i_A          225 AIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMT  304 (376)
T ss_dssp             EECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEE
T ss_pred             EEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccc
Confidence            4456899999999999999999985  4554432     48999999998   378999999999 99999987432111


Q ss_pred             e---------EEEEee-----cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          220 F---------RFVVTS-----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       220 ~---------~~~~~~-----~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      +         .+....     ..++++++++++++|++++....+++|+|+++++|++.+++++. +|+||++
T Consensus       305 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  376 (376)
T 1e3i_A          305 IPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS-IRTILTF  376 (376)
T ss_dssp             EEHHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             cCHHHhhccCeEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCc-ceEEEeC
Confidence            1         111111     25789999999999999854333358999999999999998874 7999874

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=99.90  E-value=1.5e-23  Score=191.99  Aligned_cols=195  Identities=17%  Similarity=0.176  Sum_probs=148.5

Q ss_pred             CCCcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCce-------
Q 023571           77 VGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYD-------  149 (280)
Q Consensus        77 ~~~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e-------  149 (280)
                      ...+|.+|||+++..++.+  ++++ +.|.|+|++|||||||.++|||++|++++.|.++   ..+|.++|||       
T Consensus         3 ~~~~p~~mka~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~P~v~GhE~~G~V~~   76 (373)
T 1p0f_A            3 TAGKDITCKAAVAWEPHKP--LSLE-TITVAPPKAHEVRIKILASGICGSDSSVLKEIIP---SKFPVILGHEAVGVVES   76 (373)
T ss_dssp             CTTSCEEEEEEEBSSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC---CCSSBCCCCCEEEEEEE
T ss_pred             ccCCcceeEEEEEEcCCCC--eeEE-EeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC---CCCCcccCcCceEEEEE
Confidence            3457889999999887754  7888 9999999999999999999999999999988653   1122221110       


Q ss_pred             --------------------------------------------------------------------E-----------
Q 023571          150 --------------------------------------------------------------------V-----------  150 (280)
Q Consensus       150 --------------------------------------------------------------------~-----------  150 (280)
                                                                                          +           
T Consensus        77 vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  156 (373)
T 1p0f_A           77 IGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADI  156 (373)
T ss_dssp             ECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETT
T ss_pred             ECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchh
Confidence                                                                                1           


Q ss_pred             ----------------------------------------------------------------EEecChhhHHHHHhCC
Q 023571          151 ----------------------------------------------------------------AATSSTRNLEFLKSLG  166 (280)
Q Consensus       151 ----------------------------------------------------------------~~~~s~~~~~~l~~lg  166 (280)
                                                                                      +++.+++++++++++|
T Consensus       157 ~~~~iP~~l~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG  236 (373)
T 1p0f_A          157 AVAKIDPKAPLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELG  236 (373)
T ss_dssp             SEEEECTTCCGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTT
T ss_pred             hEEECCCCCChhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcC
Confidence                                                                            4456889999999999


Q ss_pred             CCEEEeCCC--CCccccC-----CCccEEEeCCC---CHHHHHhccccC-CEEEEEcCCCCCCce-----------EEEE
Q 023571          167 ADLAIDYTK--DNFEDLP-----EKFDVVYDAIG---QCDRAVKAIKEG-GTVVALTGAVTPPGF-----------RFVV  224 (280)
Q Consensus       167 a~~vid~~~--~~~~~~~-----~g~DvV~d~~g---~~~~~l~~l~~g-G~vV~~g~~~~~~~~-----------~~~~  224 (280)
                      +++++|+++  +++.+.+     +++|+||||+|   .++.++++|+++ |+++.+|.......+           .+..
T Consensus       237 a~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g  316 (373)
T 1p0f_A          237 ATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKG  316 (373)
T ss_dssp             CSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEE
T ss_pred             CcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCceEEe
Confidence            999999985  4554422     48999999998   378999999999 999999865421111           1111


Q ss_pred             e----ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          225 T----SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       225 ~----~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      .    ...++++++++++++|++++....+++|+|+++.+|++.+++++. +|+||++
T Consensus       317 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          317 SVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             CSGGGCCGGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             eccCCcCHHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            1    113679999999999999854333358999999999999988775 7999874

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=99.90  E-value=2.7e-23  Score=190.40  Aligned_cols=193  Identities=18%  Similarity=0.237  Sum_probs=148.1

Q ss_pred             CcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCce---------
Q 023571           79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYD---------  149 (280)
Q Consensus        79 ~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e---------  149 (280)
                      ..|.+|||+++..++.+  ++++ +.|.|+|++|||||||.++|||++|++++.|.++.   .+|.++|||         
T Consensus         4 ~~~~~mkA~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~P~v~GhE~~G~V~~vG   77 (374)
T 2jhf_A            4 GKVIKCKAAVLWEEKKP--FSIE-EVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT---PLPVIAGHEAAGIVESIG   77 (374)
T ss_dssp             TSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---CSSBCCCCSEEEEEEEEC
T ss_pred             CCceeEEEEEEecCCCc--eEEE-EccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCC---CCCcccCcCceEEEEEEC
Confidence            45778999999888754  7888 89999999999999999999999999999886531   122222211         


Q ss_pred             ------------------------------------------------------------------E-------------
Q 023571          150 ------------------------------------------------------------------V-------------  150 (280)
Q Consensus       150 ------------------------------------------------------------------~-------------  150 (280)
                                                                                        +             
T Consensus        78 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  157 (374)
T 2jhf_A           78 EGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISV  157 (374)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGE
T ss_pred             CCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHe
Confidence                                                                              2             


Q ss_pred             ---------------------------------------------------------------EEecChhhHHHHHhCCC
Q 023571          151 ---------------------------------------------------------------AATSSTRNLEFLKSLGA  167 (280)
Q Consensus       151 ---------------------------------------------------------------~~~~s~~~~~~l~~lga  167 (280)
                                                                                     +++.+++++++++++|+
T Consensus       158 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa  237 (374)
T 2jhf_A          158 AKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA  237 (374)
T ss_dssp             EECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC
T ss_pred             EECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC
Confidence                                                                           44568899999999999


Q ss_pred             CEEEeCCC--CCccccC-----CCccEEEeCCC---CHHHHHhccccC-CEEEEEcCCCCCCce-----------EEEEe
Q 023571          168 DLAIDYTK--DNFEDLP-----EKFDVVYDAIG---QCDRAVKAIKEG-GTVVALTGAVTPPGF-----------RFVVT  225 (280)
Q Consensus       168 ~~vid~~~--~~~~~~~-----~g~DvV~d~~g---~~~~~l~~l~~g-G~vV~~g~~~~~~~~-----------~~~~~  225 (280)
                      ++++|+++  +++.+.+     +++|+||||+|   .++.++++|+++ |+++.+|.......+           .+...
T Consensus       238 ~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~  317 (374)
T 2jhf_A          238 TECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGA  317 (374)
T ss_dssp             SEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEEC
T ss_pred             ceEecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCCeEEEe
Confidence            99999875  4454321     48999999998   378999999999 999999865421111           11111


Q ss_pred             e-----cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          226 S-----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       226 ~-----~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      .     ..++++++++++++|++++....+++|+|+|+.+|++.+++++. +|+||++
T Consensus       318 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          318 IFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             SGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             ccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            1     25789999999999999864333368999999999999998875 7999874

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=99.90  E-value=5.4e-23  Score=188.19  Aligned_cols=126  Identities=16%  Similarity=0.118  Sum_probs=99.2

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCccccC-----CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCC--CCc-
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP-----EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVT--PPG-  219 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~-----~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~--~~~-  219 (280)
                      +++.+++++++++++|+++++|++++++.+.+     +++|+||||+|   .++.++++|+++|+++.+|....  ... 
T Consensus       220 ~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~  299 (371)
T 1f8f_A          220 AVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQF  299 (371)
T ss_dssp             EEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCC
T ss_pred             EECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCcccc
Confidence            44568899999999999999999987765432     37999999998   37899999999999999987542  111 


Q ss_pred             ---------eEEEEee-----cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          220 ---------FRFVVTS-----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       220 ---------~~~~~~~-----~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                               +.+....     ..+.++++++++++|++++....++ |+|+|+++|++.+++++. +|+||++
T Consensus       300 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~  370 (371)
T 1f8f_A          300 DVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKI  370 (371)
T ss_dssp             CHHHHHHTTCEEEECSGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEEC
T ss_pred             CHHHHHhCCCEEEEeCCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEee
Confidence                     1111111     2478999999999999987544446 999999999999998876 7999986

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=99.90  E-value=8.1e-23  Score=186.18  Aligned_cols=193  Identities=18%  Similarity=0.243  Sum_probs=151.2

Q ss_pred             CcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE--------
Q 023571           79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV--------  150 (280)
Q Consensus        79 ~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~--------  150 (280)
                      .+|++|+++.....  ++.+++. +.|.|+|++|||+|||.++|||++|++.+.|.++.  ..+|.++|||+        
T Consensus         5 ~~~m~~~a~~~~~~--~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~P~v~GhE~~G~V~~vG   79 (357)
T 2cf5_A            5 EAERKTTGWAARDP--SGILSPY-TYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM--SNYPMVPGHEVVGEVVEVG   79 (357)
T ss_dssp             -CCCEEEEEEECST--TCCEEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTC--CCSSBCCCCEEEEEEEEEC
T ss_pred             cCcceeEEEEEccC--CCCcEEE-EecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCC--CCCCeecCcceeEEEEEEC
Confidence            34567888777543  3558999 99999999999999999999999999999987641  23455555544        


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        80 ~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa  159 (357)
T 2cf5_A           80 SDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAA  159 (357)
T ss_dssp             SSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHT
T ss_pred             CCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhh
Confidence                                                                                            


Q ss_pred             -------------------------------------------------EEecChhhHHHHH-hCCCCEEEeCCCCCcc-
Q 023571          151 -------------------------------------------------AATSSTRNLEFLK-SLGADLAIDYTKDNFE-  179 (280)
Q Consensus       151 -------------------------------------------------~~~~s~~~~~~l~-~lga~~vid~~~~~~~-  179 (280)
                                                                       +++.+++++++++ ++|+++++|+++.+.. 
T Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~  239 (357)
T 2cf5_A          160 PLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMS  239 (357)
T ss_dssp             GGGTHHHHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHH
T ss_pred             hhhhhHHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHH
Confidence                                                             5666788888888 8999999999864322 


Q ss_pred             ccCCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCc-e---------EEE--EeecHHHHHHHHHHHHCCCce
Q 023571          180 DLPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPG-F---------RFV--VTSNGEVLKKLNPYLESGKVK  244 (280)
Q Consensus       180 ~~~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~-~---------~~~--~~~~~~~l~~l~~ll~~G~l~  244 (280)
                      +..+++|+||||+|   .++.++++|+++|+++.+|....+.. +         .+.  .....+.++++++++++|+++
T Consensus       240 ~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~  319 (357)
T 2cf5_A          240 ELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGLS  319 (357)
T ss_dssp             HSTTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHHHTTCC
T ss_pred             HhcCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHHHHhCccEEEEEccCCHHHHHHHHHHHHcCCCC
Confidence            23368999999998   47999999999999999987653221 1         111  112457899999999999998


Q ss_pred             eecCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          245 PIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       245 ~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      +.+   ++|+|+++++|++.+++++..||+||++.
T Consensus       320 ~~~---~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  351 (357)
T 2cf5_A          320 SII---EVVKMDYVNTAFERLEKNDVRYRFVVDVE  351 (357)
T ss_dssp             CCE---EEEEGGGHHHHHHHHHTTCSSSEEEEETT
T ss_pred             Cce---EEEeHHHHHHHHHHHHCCCCceEEEEeCC
Confidence            764   48999999999999999988899999874

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=99.90  E-value=5.1e-23  Score=188.56  Aligned_cols=127  Identities=16%  Similarity=0.142  Sum_probs=97.5

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCC--CCccccC-----CCccEEEeCCC---CHHHHHhccccC-CEEEEEcCCCC-CC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTK--DNFEDLP-----EKFDVVYDAIG---QCDRAVKAIKEG-GTVVALTGAVT-PP  218 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~--~~~~~~~-----~g~DvV~d~~g---~~~~~l~~l~~g-G~vV~~g~~~~-~~  218 (280)
                      +++.+++++++++++|+++++|+++  +++.+.+     +++|+||||+|   .++.++++|+++ |+++.+|.... ..
T Consensus       222 ~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~  301 (374)
T 1cdo_A          222 AVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDV  301 (374)
T ss_dssp             EECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCE
T ss_pred             EEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCc
Confidence            4456899999999999999999885  4554422     48999999998   378999999999 99999987653 11


Q ss_pred             ce---------EEEEee-----cHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          219 GF---------RFVVTS-----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       219 ~~---------~~~~~~-----~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      .+         .+....     ..+.++++++++++|++++....+++|+|+|+++|++.+++++. +|+||++
T Consensus       302 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          302 ATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             EECHHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             ccCHHHHhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence            11         111111     25789999999999999854333358999999999999998875 7999874

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=99.90  E-value=1.9e-23  Score=193.43  Aligned_cols=191  Identities=19%  Similarity=0.194  Sum_probs=146.5

Q ss_pred             cccceeEEEEcccCCCccEEEeeeccCCC-CCCCcEEEEEEEEecChHHHHHHcCCCCC-----CCCCCCcccCceE---
Q 023571           80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQ-VKEDQVLIKVVAAALNPVDGKRRQGKFKA-----TDSPLPTVPGYDV---  150 (280)
Q Consensus        80 ~p~~mka~~~~~~g~~~~l~l~~~~~~p~-~~~~eVlVkV~aagl~~~D~~~~~g~~~~-----~~~~~P~i~G~e~---  150 (280)
                      .|.+|+++++...+   .++++ +.|.|+ |++|||||||.++|||++|++++.|....     ....+|.++|||+   
T Consensus        27 ~~~~m~a~~~~~~~---~l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~  102 (404)
T 3ip1_A           27 GKLTWLGSKVWRYP---EVRVE-EVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGV  102 (404)
T ss_dssp             TTBBSCGGGTEEEE---EEEEE-EECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEE
T ss_pred             hhhhcceEEEEeCC---ceEEE-EcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEE
Confidence            34455555554433   58999 999999 99999999999999999999999864210     1235788888886   


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus       103 V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~  182 (404)
T 3ip1_A          103 VVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVY  182 (404)
T ss_dssp             EEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEECGGGBTTB
T ss_pred             EEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCcceEEechHHeEecccccccc
Confidence                                                                                            


Q ss_pred             ------------------------------------------------------------EEecChhhHHHHHhCCCCEE
Q 023571          151 ------------------------------------------------------------AATSSTRNLEFLKSLGADLA  170 (280)
Q Consensus       151 ------------------------------------------------------------~~~~s~~~~~~l~~lga~~v  170 (280)
                                                                                  +++.+++|+++++++|++++
T Consensus       183 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v  262 (404)
T 3ip1_A          183 EGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHV  262 (404)
T ss_dssp             CTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEE
T ss_pred             ccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEE
Confidence                                                                        45578999999999999999


Q ss_pred             EeCCCCCccccC------CCccEEEeCCCC----HHHHHhcc----ccCCEEEEEcCCCCCCceE----------EEEe-
Q 023571          171 IDYTKDNFEDLP------EKFDVVYDAIGQ----CDRAVKAI----KEGGTVVALTGAVTPPGFR----------FVVT-  225 (280)
Q Consensus       171 id~~~~~~~~~~------~g~DvV~d~~g~----~~~~l~~l----~~gG~vV~~g~~~~~~~~~----------~~~~-  225 (280)
                      ||++++++.+.+      +++|+||||+|.    +..++++|    +++|+++.+|.......++          +... 
T Consensus       263 i~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~  342 (404)
T 3ip1_A          263 IDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQ  342 (404)
T ss_dssp             ECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEECC
T ss_pred             EcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEec
Confidence            999988876532      489999999993    35666666    9999999999876432221          1111 


Q ss_pred             --ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          226 --SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       226 --~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                        ...+.++++++++++| +++....+++|+|+++.+|++.+.    .||+||+++
T Consensus       343 ~~~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKvvl~~~  393 (404)
T 3ip1_A          343 GHSGHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKSLVKVT  393 (404)
T ss_dssp             CCCSTTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTTCSCEE
T ss_pred             CCCchHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcEEEecC
Confidence              1257899999999999 876555557999999999999998    467777764

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=99.90  E-value=5.9e-23  Score=187.25  Aligned_cols=188  Identities=21%  Similarity=0.294  Sum_probs=149.2

Q ss_pred             ccceeEEEEcccCCCccEEEeeeccCCC-CCCCcEEEEEEEEecChHHHHHHcCCCCC-CCCCCCcccCceE--------
Q 023571           81 PSEMKAWLYGEYGGVDVLKFDEKVTVPQ-VKEDQVLIKVVAAALNPVDGKRRQGKFKA-TDSPLPTVPGYDV--------  150 (280)
Q Consensus        81 p~~mka~~~~~~g~~~~l~l~~~~~~p~-~~~~eVlVkV~aagl~~~D~~~~~g~~~~-~~~~~P~i~G~e~--------  150 (280)
                      |.+|||+++.+++.+  ++++ +.|.|+ |++|||+|||.++|||++|++.+.|.++. ....+|.++|||+        
T Consensus        13 ~~~mka~~~~~~g~~--l~~~-~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG   89 (359)
T 1h2b_A           13 VERLKAARLHEYNKP--LRIE-DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVA   89 (359)
T ss_dssp             ----CEEEESSTTSC--CEEE-CCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEEC
T ss_pred             hhhceEEEEecCCCC--cEEE-EccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEEC
Confidence            567999999988754  7888 999999 99999999999999999999999987630 0135688888888        


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        90 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~  169 (359)
T 1h2b_A           90 EGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADA  169 (359)
T ss_dssp             TTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTH
T ss_pred             CCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhccchhhh
Confidence                                                                                            


Q ss_pred             ----------------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc---
Q 023571          151 ----------------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL---  181 (280)
Q Consensus       151 ----------------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~---  181 (280)
                                                                    +++.+++|+++++++|+++++|++++ +.+.   
T Consensus       170 ~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-~~~~v~~  248 (359)
T 1h2b_A          170 GITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD-PVKQVME  248 (359)
T ss_dssp             HHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSC-HHHHHHH
T ss_pred             HHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccch-HHHHHHH
Confidence                                                          45567889999999999999999886 5432   


Q ss_pred             ---CCCccEEEeCCCC-----HHHHHhccccCCEEEEEcCCCCCCce----------EE--EEeecHHHHHHHHHHHHCC
Q 023571          182 ---PEKFDVVYDAIGQ-----CDRAVKAIKEGGTVVALTGAVTPPGF----------RF--VVTSNGEVLKKLNPYLESG  241 (280)
Q Consensus       182 ---~~g~DvV~d~~g~-----~~~~l~~l~~gG~vV~~g~~~~~~~~----------~~--~~~~~~~~l~~l~~ll~~G  241 (280)
                         .+++|+||||+|.     ++.++++  ++|+++.+|..... .+          .+  ......++++++++++++|
T Consensus       249 ~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g  325 (359)
T 1h2b_A          249 LTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEGSLVGNYVELHELVTLALQG  325 (359)
T ss_dssp             HTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTT
T ss_pred             HhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcC
Confidence               2389999999983     4567777  99999999875432 11          11  1122468899999999999


Q ss_pred             CceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          242 KVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       242 ~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      ++++.+ .  +|+|+++++|++.+++++..||+||++
T Consensus       326 ~l~~~i-~--~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          326 KVRVEV-D--IHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             SCCCCE-E--EEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             CCcceE-E--EEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            998876 3  899999999999999998889999974

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=99.89  E-value=2.2e-22  Score=183.10  Aligned_cols=197  Identities=19%  Similarity=0.232  Sum_probs=156.1

Q ss_pred             CcccceeEEEE-ccc---CCC--ccEEEeeeccCCCC-CCCcEEEEEEEEecChHHHHHHcC----CCCCCCCCCCcccC
Q 023571           79 TVPSEMKAWLY-GEY---GGV--DVLKFDEKVTVPQV-KEDQVLIKVVAAALNPVDGKRRQG----KFKATDSPLPTVPG  147 (280)
Q Consensus        79 ~~p~~mka~~~-~~~---g~~--~~l~l~~~~~~p~~-~~~eVlVkV~aagl~~~D~~~~~g----~~~~~~~~~P~i~G  147 (280)
                      .+|.+|||+++ ..+   |.+  +.++++ +.|.|+| ++|||+|||.++|||++|++.+.|    .++ ....+|.++|
T Consensus         4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~-~~~~~p~v~G   81 (357)
T 2zb4_A            4 AAAMIVQRVVLNSRPGKNGNPVAENFRME-EVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYI-TPWQLSQVVD   81 (357)
T ss_dssp             --CCEEEEEEECCCCCTTSCCCGGGEEEE-EEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSS-CCCCBTSBCE
T ss_pred             cccccceEEEEeccCCCCCCCCcCceEEE-eecCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccc-CCCCCCcccc
Confidence            45778999999 565   555  779999 9999999 999999999999999999998776    232 1235678888


Q ss_pred             ceE-----------------------------------------------------------------------------
Q 023571          148 YDV-----------------------------------------------------------------------------  150 (280)
Q Consensus       148 ~e~-----------------------------------------------------------------------------  150 (280)
                      ||+                                                                             
T Consensus        82 ~E~~G~V~~~~v~~~~vGdrV~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~g~~  161 (357)
T 2zb4_A           82 GGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSN  161 (357)
T ss_dssp             EEEEEEEEEECSTTCCTTCEEEEEEEESBSEEEEEGGGCEECCGGGGTTCGGGGGTTTSHHHHHHHHHHHHHSCCCTTSC
T ss_pred             ccEEEEEEecCCCCCCCCCEEEecCCCcEEEEEEchHHceecCcccccCchhHHHHhcccHHHHHHHHHHHhcCCCCCCc
Confidence            887                                                                             


Q ss_pred             -----------------------------EEecChhhHHHHHh-CCCCEEEeCCCCCccccC-----CCccEEEeCCC--
Q 023571          151 -----------------------------AATSSTRNLEFLKS-LGADLAIDYTKDNFEDLP-----EKFDVVYDAIG--  193 (280)
Q Consensus       151 -----------------------------~~~~s~~~~~~l~~-lga~~vid~~~~~~~~~~-----~g~DvV~d~~g--  193 (280)
                                                   +++.++++++.+++ +|++.++|+.++++.+.+     +++|++|||+|  
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~~G~~  241 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGN  241 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEESCCHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCEEEECCCHH
Confidence                                         45567788888886 999999999887765432     37999999999  


Q ss_pred             CHHHHHhccccCCEEEEEcCCCC---CCc-----------------eEEEEe--e-----cHHHHHHHHHHHHCCCceee
Q 023571          194 QCDRAVKAIKEGGTVVALTGAVT---PPG-----------------FRFVVT--S-----NGEVLKKLNPYLESGKVKPI  246 (280)
Q Consensus       194 ~~~~~l~~l~~gG~vV~~g~~~~---~~~-----------------~~~~~~--~-----~~~~l~~l~~ll~~G~l~~~  246 (280)
                      .++.++++|+++|+++.+|....   ...                 +.+...  .     ..+.++++++++++|++++.
T Consensus       242 ~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  321 (357)
T 2zb4_A          242 ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIK  321 (357)
T ss_dssp             HHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCC
T ss_pred             HHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCc
Confidence            68899999999999999986431   110                 111111  1     15779999999999999987


Q ss_pred             cCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          247 IDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       247 ~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      +..  .|+|+++.+|++.+++++..||+||++.
T Consensus       322 ~~~--~~~l~~~~~A~~~~~~~~~~gKvvi~~~  352 (357)
T 2zb4_A          322 ETV--INGLENMGAAFQSMMTGGNIGKQIVCIS  352 (357)
T ss_dssp             EEE--EECGGGHHHHHHHHHTTCCSBEEEEECC
T ss_pred             cce--ecCHHHHHHHHHHHHcCCCCceEEEEEe
Confidence            664  6999999999999999988899999875

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=99.89  E-value=1.8e-22  Score=184.53  Aligned_cols=189  Identities=15%  Similarity=0.145  Sum_probs=148.2

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-------------  150 (280)
                      ||+..+..++.++.+++. +.|.|+|++|||+|||.++|||++|++++.|.++.  ..+|.++|||+             
T Consensus        15 mk~~~~~~~~~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~P~v~GhE~~G~V~~vG~~V~~   91 (366)
T 1yqd_A           15 VKAFGWAARDQSGHLSPF-NFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGF--SMYPLVPGHEIVGEVTEVGSKVKK   91 (366)
T ss_dssp             EEEEEEEECSTTCCEEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSC--CCSSBCCCCCEEEEEEEECTTCCS
T ss_pred             eeEEEEEEcCCCCCcEEE-EccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCC--CCCCEecccceEEEEEEECCCCCc
Confidence            666666666666679999 99999999999999999999999999999886531  22344444332             


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        92 ~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~  171 (366)
T 1yqd_A           92 VNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCA  171 (366)
T ss_dssp             CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTH
T ss_pred             CCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhh
Confidence                                                                                            


Q ss_pred             --------------------------------------------EEecChhhHHHHH-hCCCCEEEeCCCCCcc-ccCCC
Q 023571          151 --------------------------------------------AATSSTRNLEFLK-SLGADLAIDYTKDNFE-DLPEK  184 (280)
Q Consensus       151 --------------------------------------------~~~~s~~~~~~l~-~lga~~vid~~~~~~~-~~~~g  184 (280)
                                                                  +++.+++++++++ ++|+++++|+++.+.. +..++
T Consensus       172 ~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~  251 (366)
T 1yqd_A          172 GITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGT  251 (366)
T ss_dssp             HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTC
T ss_pred             HHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCC
Confidence                                                        5567888998887 8999999999875432 23368


Q ss_pred             ccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCce----------EEE--EeecHHHHHHHHHHHHCCCceeecCC
Q 023571          185 FDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF----------RFV--VTSNGEVLKKLNPYLESGKVKPIIDP  249 (280)
Q Consensus       185 ~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~----------~~~--~~~~~~~l~~l~~ll~~G~l~~~~~~  249 (280)
                      +|+||||+|   .++.++++|+++|+++.+|....+..+          .+.  .....+.+.++++++++|++++.+  
T Consensus       252 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~--  329 (366)
T 1yqd_A          252 LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKHNITADI--  329 (366)
T ss_dssp             EEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHTTCCCCE--
T ss_pred             CCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCCCce--
Confidence            999999998   479999999999999999876533211          111  112457899999999999998765  


Q ss_pred             CcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          250 KGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       250 ~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                       ++|+|+|+++|++.+++++..||+||++
T Consensus       330 -~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (366)
T 1yqd_A          330 -EVISTDYLNTAMERLAKNDVRYRFVIDV  357 (366)
T ss_dssp             -EEECGGGHHHHHHHHHTTCCSSEEEECH
T ss_pred             -EEEcHHHHHHHHHHHHcCCcceEEEEEc
Confidence             3899999999999999998889999976

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=99.89  E-value=3.6e-23  Score=188.72  Aligned_cols=196  Identities=18%  Similarity=0.253  Sum_probs=150.1

Q ss_pred             ccceeEEEEcccCCC-ccEEEeeeccCCCCC--CCcEEEEEEEEecChHHHHHHcCCCCCCCCCCC---------cccCc
Q 023571           81 PSEMKAWLYGEYGGV-DVLKFDEKVTVPQVK--EDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP---------TVPGY  148 (280)
Q Consensus        81 p~~mka~~~~~~g~~-~~l~l~~~~~~p~~~--~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P---------~i~G~  148 (280)
                      |.+|||+++.++|.+ +.++++ +.|.|+|+  +|||+|||.++|||++|++++.|.++. ...+|         .++||
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~-~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~P~~~~~~~p~~i~G~   78 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQ-SFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPS-KPAKTTGFGTTEPAAPCGN   78 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEE-EEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSC-CCCCBSTTCCSSCBEECCS
T ss_pred             CceEEEEEeccCCCchheeEEe-eccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCC-CCCCCccccccCcccccCc
Confidence            457999999998865 458888 89888877  999999999999999999999997752 23456         78888


Q ss_pred             eE------------------------------------------------------------------------------
Q 023571          149 DV------------------------------------------------------------------------------  150 (280)
Q Consensus       149 e~------------------------------------------------------------------------------  150 (280)
                      |+                                                                              
T Consensus        79 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l  158 (364)
T 1gu7_A           79 EGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLML  158 (364)
T ss_dssp             CCEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHH
T ss_pred             eeEEEEEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHH
Confidence            88                                                                              


Q ss_pred             --------------------------------------EEecChhh----HHHHHhCCCCEEEeCCC---CCcccc----
Q 023571          151 --------------------------------------AATSSTRN----LEFLKSLGADLAIDYTK---DNFEDL----  181 (280)
Q Consensus       151 --------------------------------------~~~~s~~~----~~~l~~lga~~vid~~~---~~~~~~----  181 (280)
                                                            +++.+.++    +++++++|+++++|+++   +++.+.    
T Consensus       159 ~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~  238 (364)
T 1gu7_A          159 THYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEW  238 (364)
T ss_dssp             HSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHH
T ss_pred             HHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHH
Confidence                                                  33345544    67888999999999875   454432    


Q ss_pred             ----CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCC-CCce----------EEEEee-----------cHHHHHH
Q 023571          182 ----PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVT-PPGF----------RFVVTS-----------NGEVLKK  233 (280)
Q Consensus       182 ----~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~-~~~~----------~~~~~~-----------~~~~l~~  233 (280)
                          .+++|+||||+|  ....++++|+++|+++.+|.... ...+          .+....           ..+.+++
T Consensus       239 t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  318 (364)
T 1gu7_A          239 IKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQ  318 (364)
T ss_dssp             HHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHH
T ss_pred             hhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCCCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHH
Confidence                358999999999  45588999999999999987542 1111          111111           1367899


Q ss_pred             HHHHHHCCCceeecCCCccc-chhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          234 LNPYLESGKVKPIIDPKGPF-PFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       234 l~~ll~~G~l~~~~~~~~~~-~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      +++++++|++++....+..+ +++++.+|++.+.+++..||+||++
T Consensus       319 ~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          319 IIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            99999999999876542334 4569999999999998889999974

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=99.89  E-value=2.1e-23  Score=189.00  Aligned_cols=191  Identities=20%  Similarity=0.215  Sum_probs=152.9

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCC-CCCCCCcccCceE------------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA-TDSPLPTVPGYDV------------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~-~~~~~P~i~G~e~------------  150 (280)
                      |||+++.+++.+  ++++ +.|.|+|++|||+|||.++|||++|++.+.|.++. ....+|.++|||+            
T Consensus         1 Mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   77 (343)
T 2dq4_A            1 MRALAKLAPEEG--LTLV-DRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVR   77 (343)
T ss_dssp             CEEEEECSSSSS--CEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred             CeEEEEeCCCCc--EEEE-eccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCC
Confidence            899999988765  8888 99999999999999999999999999999986530 0135788899998            


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        78 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~~~l  157 (343)
T 2dq4_A           78 RPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTV  157 (343)
T ss_dssp             SSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTHHHHHHHHHHH
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhhhHHHHHHHHH
Confidence                                                                                            


Q ss_pred             ------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEE
Q 023571          151 ------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVY  189 (280)
Q Consensus       151 ------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~  189 (280)
                                                          +++.+++++++++++ +++++|++++++.+.     .+++|+||
T Consensus       158 ~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vi  236 (343)
T 2dq4_A          158 YAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLL  236 (343)
T ss_dssp             HSTTCCTTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEE
T ss_pred             HHhCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEE
Confidence                                                455677888888889 999999988776543     35899999


Q ss_pred             eCCC---CHHHHHhccccCCEEEEEcCCCCCCceE-----------EEE--ee-cHHHHHHHHHHHHCCCceeecCCCcc
Q 023571          190 DAIG---QCDRAVKAIKEGGTVVALTGAVTPPGFR-----------FVV--TS-NGEVLKKLNPYLESGKVKPIIDPKGP  252 (280)
Q Consensus       190 d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~~-----------~~~--~~-~~~~l~~l~~ll~~G~l~~~~~~~~~  252 (280)
                      ||+|   .++.++++|+++|+++.+|.......++           +..  .. ..+.++++++++++|+++.....+++
T Consensus       237 d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~  316 (343)
T 2dq4_A          237 EFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDLSPLLTHR  316 (343)
T ss_dssp             ECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHHTSSCCGGGEEEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHcCCCChHHheeEE
Confidence            9998   3789999999999999998754321111           111  11 46789999999999996533332358


Q ss_pred             cchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          253 FPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       253 ~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      |+|+++++|++.+++++. ||+||+++
T Consensus       317 ~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          317 LPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             EEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             ecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence            999999999999999887 99999874

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.89  E-value=1.9e-22  Score=184.56  Aligned_cols=126  Identities=18%  Similarity=0.218  Sum_probs=100.2

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCccccC-CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCC-ce-----
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP-EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP-GF-----  220 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~-~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~-~~-----  220 (280)
                      +++.+++++++++++|+++++|+.++++.+.. +++|+||||+|   .++.++++|+++|+++.+|...... .+     
T Consensus       223 ~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~  302 (369)
T 1uuf_A          223 AFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNL  302 (369)
T ss_dssp             EEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHH
T ss_pred             EEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHH
Confidence            45678899999999999999999876654433 68999999998   4899999999999999998764321 11     


Q ss_pred             -----EEE--EeecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          221 -----RFV--VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       221 -----~~~--~~~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                           .+.  .....++++++++++++|++++.+.   .|+|+++++|++.+++++..||+||+++
T Consensus       303 ~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i~---~~~l~~~~~A~~~~~~~~~~gKvvi~~~  365 (369)
T 1uuf_A          303 IMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIE---MIRADQINEAYERMLRGDVKYRFVIDNR  365 (369)
T ss_dssp             HTTTCEEEECCSCCHHHHHHHHHHHHHHTCCCCEE---EECGGGHHHHHHHHHTTCSSSEEEEEGG
T ss_pred             HhCCcEEEEeecCCHHHHHHHHHHHHhCCCCcceE---EEcHHHHHHHHHHHHcCCCceEEEEecC
Confidence                 111  1224678999999999999987643   7999999999999999888899999874

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=99.89  E-value=1.2e-22  Score=184.19  Aligned_cols=189  Identities=29%  Similarity=0.344  Sum_probs=153.9

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCC------CCCCCCcccCceE-------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA------TDSPLPTVPGYDV-------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~------~~~~~P~i~G~e~-------  150 (280)
                      |||+++..++++  ++++ +.|.|+|++|||+|||.++|||++|++++.|.++.      ....+|.++|||+       
T Consensus         1 Mka~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   77 (347)
T 1jvb_A            1 MRAVRLVEIGKP--LSLQ-EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV   77 (347)
T ss_dssp             CEEEEECSTTSC--CEEE-ECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEE
T ss_pred             CeEEEEecCCCC--eEEE-EeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEE
Confidence            899999988754  7888 99999999999999999999999999999886541      0235678888887       


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        78 G~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i~~~~~~~aa~l~~~~~  157 (347)
T 1jvb_A           78 GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGI  157 (347)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCHHHHGGGGTHHH
T ss_pred             CCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEeCCCCHHHcccchhhHH
Confidence                                                                                            


Q ss_pred             -------------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCcccc----C-
Q 023571          151 -------------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL----P-  182 (280)
Q Consensus       151 -------------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~----~-  182 (280)
                                                                 +++.+++++++++++|+++++|+.++++.+.    . 
T Consensus       158 ta~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  237 (347)
T 1jvb_A          158 TTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITE  237 (347)
T ss_dssp             HHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTT
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhc
Confidence                                                       4556788899999999999999988775321    2 


Q ss_pred             -CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCC-CCCceE----------E--EEeecHHHHHHHHHHHHCCCcee
Q 023571          183 -EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAV-TPPGFR----------F--VVTSNGEVLKKLNPYLESGKVKP  245 (280)
Q Consensus       183 -~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~-~~~~~~----------~--~~~~~~~~l~~l~~ll~~G~l~~  245 (280)
                       +++|++||++|   .++.++++|+++|+++.+|... .. .++          +  ......+.++++++++++|++++
T Consensus       238 ~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~  316 (347)
T 1jvb_A          238 SKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKP  316 (347)
T ss_dssp             TSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHHTTSSCC
T ss_pred             CCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccCHHHHHHHHHHHHcCCCCc
Confidence             48999999998   4689999999999999998755 22 211          1  11224688999999999999987


Q ss_pred             ecCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          246 IIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       246 ~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                      .+.  ++|+|+++++|++.+++++..||+||++
T Consensus       317 ~i~--~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          317 MIT--KTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             CCE--EEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             eEE--EEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            654  4899999999999999998889999974

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=99.88  E-value=4e-23  Score=187.18  Aligned_cols=191  Identities=21%  Similarity=0.337  Sum_probs=127.1

Q ss_pred             cceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-----------
Q 023571           82 SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-----------  150 (280)
Q Consensus        82 ~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-----------  150 (280)
                      .+|||+++.+++.+  ++++ +.|.|+|++|||+|||.++|||++|++.+.|.++.....+|.++|||+           
T Consensus         2 ~~mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~~   78 (344)
T 2h6e_A            2 VKSKAALLKKFSEP--LSIE-DVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGELA   78 (344)
T ss_dssp             EEEEBCEECSCCC--------EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTTC
T ss_pred             ceeEEEEEecCCCC--CeEE-EeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCCC
Confidence            46999999988644  7888 899999999999999999999999999999876411124556666665           


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        79 ~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i~~l~~~~aa~l~~~~~ta~~a  158 (344)
T 2h6e_A           79 KVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGA  158 (344)
T ss_dssp             CCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEESSSCHHHHGGGGTHHHHHHHH
T ss_pred             CCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEeCCCCHHHhhhhhhhhHHHHHH
Confidence                                                                                            


Q ss_pred             ------------------------------------------EEecChhhHHHHHhCCCCEEEeCCC-CCcccc---CCC
Q 023571          151 ------------------------------------------AATSSTRNLEFLKSLGADLAIDYTK-DNFEDL---PEK  184 (280)
Q Consensus       151 ------------------------------------------~~~~s~~~~~~l~~lga~~vid~~~-~~~~~~---~~g  184 (280)
                                                                +++.+++++++++++|+++++|+++ +++...   .++
T Consensus       159 l~~~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g  238 (344)
T 2h6e_A          159 IRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLG  238 (344)
T ss_dssp             HHHHHHHHTTCSSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCC
T ss_pred             HHhhhhcccCCCCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCC
Confidence                                                      1222445566666677777777765 443322   248


Q ss_pred             ccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCce----------EE--EEeecHHHHHHHHHHHHCCCceeecCC
Q 023571          185 FDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF----------RF--VVTSNGEVLKKLNPYLESGKVKPIIDP  249 (280)
Q Consensus       185 ~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~----------~~--~~~~~~~~l~~l~~ll~~G~l~~~~~~  249 (280)
                      +|+||||+|   .++.++++|+++|+++.+|.......+          .+  ......++++++++++++|++++.+ .
T Consensus       239 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i-~  317 (344)
T 2h6e_A          239 ASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIKPYI-I  317 (344)
T ss_dssp             EEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCE-E
T ss_pred             ccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHHHHHHHHHHHHcCCCCcce-E
Confidence            999999998   478999999999999999876532211          11  1123468899999999999998876 4


Q ss_pred             CcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 023571          250 KGPFPFSQVVEAFSYIETNKATGKVVIHP  278 (280)
Q Consensus       250 ~~~~~l~~v~~A~~~l~~~~~~gkvVv~~  278 (280)
                        +|+|+++++|++.+++++..||+||++
T Consensus       318 --~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          318 --KVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             --EECC----------------CEEEECC
T ss_pred             --EEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence              899999999999999988889999864

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.86  E-value=1.4e-21  Score=194.78  Aligned_cols=187  Identities=20%  Similarity=0.248  Sum_probs=152.7

Q ss_pred             eeEEEEcccCCCccEEEeeeccC--CCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-----------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTV--PQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-----------  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~--p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-----------  150 (280)
                      ...+.+..+|.++.+++. +.+.  |+|++|||+|||+++|||++|++++.|.++     .|.++|||+           
T Consensus       210 ~~~l~~~~~G~~~~L~~~-~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~-----~~~~lG~E~aG~V~~vG~~V  283 (795)
T 3slk_A          210 GWRLEATRPGSLDGLALV-DEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP-----GVASLGSEGAGVVVETGPGV  283 (795)
T ss_dssp             SCCEEESSTTSSTTEEEC-CCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS-----SCCCSCCCEEEEEEEECSSC
T ss_pred             eEEEecCCCCCccceEEE-eCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC-----CCccccceeEEEEEEeCCCC
Confidence            345677888888889999 7764  678999999999999999999999999774     356799999           


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus       284 ~~~~vGDrV~~~~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~ai  363 (795)
T 3slk_A          284 TGLAPGDRVMGMIPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAI  363 (795)
T ss_dssp             CSSCTTCEEEECCSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHH
T ss_pred             CcCCCCCEEEEEecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHH
Confidence                                                                                            


Q ss_pred             ----------EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEEc
Q 023571          151 ----------AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALT  212 (280)
Q Consensus       151 ----------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g  212 (280)
                                +++.+.+|.++++ +|+++++|+++.++.+.      .+|+|+||||+|  .++.++++|+++|++|.+|
T Consensus       364 qlAk~~Ga~V~~t~~~~k~~~l~-lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~l~~~Gr~v~iG  442 (795)
T 3slk_A          364 QLARHLGAEVYATASEDKWQAVE-LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELG  442 (795)
T ss_dssp             HHHHHTTCCEEEECCGGGGGGSC-SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCCTTTTHHHHTSCTTCEEEEECC
T ss_pred             HHHHHcCCEEEEEeChHHhhhhh-cChhheeecCChhHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHhcCCCEEEEec
Confidence                      4445556777666 99999999999888664      258999999988  6899999999999999998


Q ss_pred             CCCCC---------CceEEEEe--------ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCeeEE
Q 023571          213 GAVTP---------PGFRFVVT--------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVV  275 (280)
Q Consensus       213 ~~~~~---------~~~~~~~~--------~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvV  275 (280)
                      .....         ..+.+...        ..++.++++++++++|++++.+.  ++|+++++.+||+.+.+++..||+|
T Consensus       443 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~~~--~~~~l~~~~eA~~~l~~g~~~GKvV  520 (795)
T 3slk_A          443 KTDVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPV--TAWDVRQAPEALRHLSQARHVGKLV  520 (795)
T ss_dssp             STTCCCHHHHHHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCCCE--EEEEGGGHHHHHHHHHHTCCCBEEE
T ss_pred             cccccCcccccccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCCcc--eeEcHHHHHHHHHHHhcCCccceEE
Confidence            76522         12222211        12477899999999999998655  4999999999999999999999999


Q ss_pred             EEeC
Q 023571          276 IHPI  279 (280)
Q Consensus       276 v~~~  279 (280)
                      |++.
T Consensus       521 l~~~  524 (795)
T 3slk_A          521 LTMP  524 (795)
T ss_dssp             EECC
T ss_pred             EecC
Confidence            9874

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=99.86  E-value=3e-21  Score=177.21  Aligned_cols=126  Identities=21%  Similarity=0.307  Sum_probs=99.9

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCC---CCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCC-C-
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYT---KDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAV-T-  216 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~---~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~-~-  216 (280)
                      +++.+++++++++++|+++++|++   ++++.+.      .+++|+||||+|   .++.++++|+++|+++.+|... . 
T Consensus       225 ~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~  304 (380)
T 1vj0_A          225 VIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQD  304 (380)
T ss_dssp             EEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCC
T ss_pred             EEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCC
Confidence            455688899999999999999998   5554432      137999999998   3789999999999999998765 3 


Q ss_pred             CCce-----------EEE--EeecHHHHHHHHHHHHC--CCceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          217 PPGF-----------RFV--VTSNGEVLKKLNPYLES--GKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       217 ~~~~-----------~~~--~~~~~~~l~~l~~ll~~--G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      ...+           .+.  .....+.++++++++++  |++++.+.  ++|+|+++.+|++.+++++.. |+||++.
T Consensus       305 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~~~g~l~~~i~--~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~  379 (380)
T 1vj0_A          305 PVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLLSKLIT--HRLPLKEANKALELMESREAL-KVILYPE  379 (380)
T ss_dssp             CEEECHHHHTTTTTCEEEECCCCCHHHHHHHHHHHHTCHHHHGGGCC--EEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred             CeeEchHHHHHhCCeEEEEeecCCHHHHHHHHHHHHhhcCCeeeEEE--EEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence            2111           111  11246889999999999  99976554  589999999999999999888 9999875

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=99.86  E-value=6.2e-21  Score=176.06  Aligned_cols=127  Identities=15%  Similarity=0.191  Sum_probs=95.5

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCC-cccc------CCCccEEEeCCCC------------------HHHHHhccccC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDN-FEDL------PEKFDVVYDAIGQ------------------CDRAVKAIKEG  205 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~-~~~~------~~g~DvV~d~~g~------------------~~~~l~~l~~g  205 (280)
                      +++.+++|+++++++|++ +||+++++ +.+.      .+++|+||||+|.                  ++.++++|+++
T Consensus       215 ~~~~~~~~~~~a~~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  293 (398)
T 1kol_A          215 VGDLNPARLAHAKAQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA  293 (398)
T ss_dssp             EEESCHHHHHHHHHTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE
T ss_pred             EEcCCHHHHHHHHHcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcC
Confidence            455688899999999997 88988754 4432      2479999999982                  67999999999


Q ss_pred             CEEEEEcCCC--CC-----------Cce----------EEEE--eecHHHHHHHHHHHHCCCce-eecCCCcccchhhHH
Q 023571          206 GTVVALTGAV--TP-----------PGF----------RFVV--TSNGEVLKKLNPYLESGKVK-PIIDPKGPFPFSQVV  259 (280)
Q Consensus       206 G~vV~~g~~~--~~-----------~~~----------~~~~--~~~~~~l~~l~~ll~~G~l~-~~~~~~~~~~l~~v~  259 (280)
                      |+++.+|...  .+           ..+          .+..  ....+.++++++++++|+++ +....+++|+|+|++
T Consensus       294 G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~  373 (398)
T 1kol_A          294 GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAP  373 (398)
T ss_dssp             EEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHH
T ss_pred             CEEEEeccccCCcccccccccccccccccHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHH
Confidence            9999998651  11           111          1111  12356789999999999998 222223589999999


Q ss_pred             HHHHHHHhCCCCeeEEEEeC
Q 023571          260 EAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       260 ~A~~~l~~~~~~gkvVv~~~  279 (280)
                      +|++.+++++. ||+||+++
T Consensus       374 ~A~~~~~~~~~-gKvvi~~~  392 (398)
T 1kol_A          374 RGYGEFDAGVP-KKFVIDPH  392 (398)
T ss_dssp             HHHHHHHHTCS-CEEEECTT
T ss_pred             HHHHHHhCCCc-eEEEEEeC
Confidence            99999999887 99999864

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=99.85  E-value=4.2e-21  Score=177.30  Aligned_cols=127  Identities=15%  Similarity=0.218  Sum_probs=97.7

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCc-cccC------CCccEEEeCCCC-----------------HHHHHhccccCC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNF-EDLP------EKFDVVYDAIGQ-----------------CDRAVKAIKEGG  206 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~-~~~~------~g~DvV~d~~g~-----------------~~~~l~~l~~gG  206 (280)
                      +++.+++++++++++|++ ++|++++++ .+.+      +++|+||||+|.                 ++.++++|+++|
T Consensus       215 ~~~~~~~~~~~a~~lGa~-~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG  293 (398)
T 2dph_A          215 VGDQNPERLKLLSDAGFE-TIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGG  293 (398)
T ss_dssp             EEESCHHHHHHHHTTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEE
T ss_pred             EEcCCHHHHHHHHHcCCc-EEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCC
Confidence            455688899999999995 899988775 4432      379999999982                 689999999999


Q ss_pred             EEEEEcCCC--C---------CCceEEE----------E----eecHHHHHHHHHHHHCCCce--eecCCCcccchhhHH
Q 023571          207 TVVALTGAV--T---------PPGFRFV----------V----TSNGEVLKKLNPYLESGKVK--PIIDPKGPFPFSQVV  259 (280)
Q Consensus       207 ~vV~~g~~~--~---------~~~~~~~----------~----~~~~~~l~~l~~ll~~G~l~--~~~~~~~~~~l~~v~  259 (280)
                      +++.+|...  .         ...+.+.          +    ....+.++++++++++|+++  +....+++|+|+++.
T Consensus       294 ~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~  373 (398)
T 2dph_A          294 AIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAP  373 (398)
T ss_dssp             EEECCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHH
T ss_pred             EEEEeccccccccccccccccCCcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHH
Confidence            999998762  1         1111111          0    11346789999999999998  743333589999999


Q ss_pred             HHHHHHHhCCCCeeEEEEeC
Q 023571          260 EAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       260 ~A~~~l~~~~~~gkvVv~~~  279 (280)
                      +|++.+++++. ||+||+++
T Consensus       374 ~A~~~~~~~~~-gKvvv~~~  392 (398)
T 2dph_A          374 DGYAKFDKGSP-AKFVIDPH  392 (398)
T ss_dssp             HHHHHHHTTCS-CEEEECTT
T ss_pred             HHHHHHhcCCc-eEEEEecC
Confidence            99999999888 99999874

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=99.85  E-value=3.6e-21  Score=176.68  Aligned_cols=193  Identities=16%  Similarity=0.199  Sum_probs=146.1

Q ss_pred             ccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCC-----------------------
Q 023571           81 PSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA-----------------------  137 (280)
Q Consensus        81 p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~-----------------------  137 (280)
                      +..|||++....  +..++++ +.|.|+|++|||||||.++|||++|++++.|.++.                       
T Consensus         5 ~~~mka~v~~~~--~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~   81 (379)
T 3iup_A            5 ALQLRSRIKSSG--ELELSLD-SIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAM   81 (379)
T ss_dssp             EEEEEEEECTTS--EEEEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHH
T ss_pred             hhhHHHHHhcCC--CCceEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccc
Confidence            456999887532  2358999 99999999999999999999999999999986310                       


Q ss_pred             ----CCCCCCcccCceE---------------------------------------------------------------
Q 023571          138 ----TDSPLPTVPGYDV---------------------------------------------------------------  150 (280)
Q Consensus       138 ----~~~~~P~i~G~e~---------------------------------------------------------------  150 (280)
                          ....+|.++|||+                                                               
T Consensus        82 ~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~  161 (379)
T 3iup_A           82 RSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTAL  161 (379)
T ss_dssp             HHHGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECCSCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHH
T ss_pred             cccccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecCCCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHH
Confidence                0135688999999                                                               


Q ss_pred             ---------------------------------------EEecChhhHHHHHhCCCCEEEeCCCCCccccC------CCc
Q 023571          151 ---------------------------------------AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------EKF  185 (280)
Q Consensus       151 ---------------------------------------~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------~g~  185 (280)
                                                             +++.+++|+++++++|++++||++++++.+.+      +++
T Consensus       162 ~~~~~~~~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~v~~~t~~~g~  241 (379)
T 3iup_A          162 GMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEALVSTGA  241 (379)
T ss_dssp             HHHHHHHHTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHHHHHHHHHHCC
T ss_pred             HHHHHhccCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHHHHHHhcCCCc
Confidence                                                   56678999999999999999999998876643      479


Q ss_pred             cEEEeCCC---CHHHHHhccc-----cC-----------CEEEEEcCCCC-C--------CceEEEEee--------c--
Q 023571          186 DVVYDAIG---QCDRAVKAIK-----EG-----------GTVVALTGAVT-P--------PGFRFVVTS--------N--  227 (280)
Q Consensus       186 DvV~d~~g---~~~~~l~~l~-----~g-----------G~vV~~g~~~~-~--------~~~~~~~~~--------~--  227 (280)
                      |+||||+|   .++.++++++     ++           |+++.+|.... +        ..+.+....        .  
T Consensus       242 d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  321 (379)
T 3iup_A          242 TIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFNRNFGMAWGMGGWLLFPFLQKIGRE  321 (379)
T ss_dssp             CEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEEEEEECCCSCSCEEEEECCHHHHHHHHCHH
T ss_pred             eEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCCccccccccccceEEEEEEeeeecccCCHH
Confidence            99999998   3578888885     44           56655554331 0        011111100        1  


Q ss_pred             --HHHHHHHHHHHHCCCceeecCCCcccchhhH--HHHHHHHHhCCCCeeEEEEeC
Q 023571          228 --GEVLKKLNPYLESGKVKPIIDPKGPFPFSQV--VEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       228 --~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v--~~A~~~l~~~~~~gkvVv~~~  279 (280)
                        .+.++++.+++++ .+++.+.  ++|+|+++  ++|++.+.+++..||+||+++
T Consensus       322 ~~~~~~~~~~~~~~~-~l~~~i~--~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~  374 (379)
T 3iup_A          322 RANALKQRVVAELKT-TFASHYS--KEISLAEVLDLDMIAVYNKRATGEKYLINPN  374 (379)
T ss_dssp             HHHHHHHHHHHTTTT-TTCCCCS--EEEEHHHHTCHHHHHHHTTCCTTCCEEEETT
T ss_pred             HHHHHHHHHHHHHhc-cCCCcce--EEecHHHhhhHHHHHHHhcCCCCceEEEeCC
Confidence              1445777777777 4777665  49999999  999999999999999999875

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=99.85  E-value=4.9e-20  Score=165.99  Aligned_cols=189  Identities=19%  Similarity=0.314  Sum_probs=144.7

Q ss_pred             ccceeEEEEccc--CC--CccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE------
Q 023571           81 PSEMKAWLYGEY--GG--VDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV------  150 (280)
Q Consensus        81 p~~mka~~~~~~--g~--~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~------  150 (280)
                      +.+||++++.++  |.  ++.++++ +.|.|+|++|||||||.++|||+.|+.+ .+     ...+|.++|||+      
T Consensus         5 ~~~mka~~~~~~~~g~~~~~~l~~~-e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~~-----~~~~p~~~g~e~~G~Vv~   77 (333)
T 1v3u_A            5 MVKAKSWTLKKHFQGKPTQSDFELK-TVELPPLKNGEVLLEALFLSVDPYMRIA-SK-----RLKEGAVMMGQQVARVVE   77 (333)
T ss_dssp             CCEEEEEEECC-----CCGGGEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHH-TT-----TCCTTSBCCCCEEEEEEE
T ss_pred             cccccEEEEeecCCCCCCccceEEE-eCCCCCCCCCEEEEEEEEeccCHHHccc-cC-----cCCCCcccccceEEEEEe
Confidence            456999999885  43  3679999 9999999999999999999999998743 11     123344455544      


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        78 ~~v~~~~vGdrV~~~g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~gg  157 (333)
T 1v3u_A           78 SKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGA  157 (333)
T ss_dssp             ESCTTSCTTCEEEECCCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBH
T ss_pred             cCCCCCCCCCEEEecCceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCc
Confidence                                                                                            


Q ss_pred             -----------------EEecChhhHHHHHhCCCCEEEeCCC-CCccccC-----CCccEEEeCCC--CHHHHHhccccC
Q 023571          151 -----------------AATSSTRNLEFLKSLGADLAIDYTK-DNFEDLP-----EKFDVVYDAIG--QCDRAVKAIKEG  205 (280)
Q Consensus       151 -----------------~~~~s~~~~~~l~~lga~~vid~~~-~~~~~~~-----~g~DvV~d~~g--~~~~~l~~l~~g  205 (280)
                                       +++.++++++.++++|++.++|+.+ +++.+..     +++|++|||+|  .+..++++|+++
T Consensus       158 iG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~  237 (333)
T 1v3u_A          158 VGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDF  237 (333)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCChHHHHHHHHHHhcC
Confidence                             4556788899999999999999987 6654322     57999999999  588999999999


Q ss_pred             CEEEEEcCCCC------CC---c--------eEEEEe--------ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHH
Q 023571          206 GTVVALTGAVT------PP---G--------FRFVVT--------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVE  260 (280)
Q Consensus       206 G~vV~~g~~~~------~~---~--------~~~~~~--------~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~  260 (280)
                      |+++.+|....      +.   .        +.+...        ...+.++++++++++|++++....  .++|+++.+
T Consensus       238 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~--~~~l~~~~~  315 (333)
T 1v3u_A          238 GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHV--TKGFENMPA  315 (333)
T ss_dssp             EEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEEE--EECGGGHHH
T ss_pred             CEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCcccc--ccCHHHHHH
Confidence            99999986532      10   1        111111        114678899999999999987664  689999999


Q ss_pred             HHHHHHhCCCCeeEEEEe
Q 023571          261 AFSYIETNKATGKVVIHP  278 (280)
Q Consensus       261 A~~~l~~~~~~gkvVv~~  278 (280)
                      |++.+++++..||+||++
T Consensus       316 A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          316 AFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             HHHHHHTTCCSBEEEEEC
T ss_pred             HHHHHHcCCCCceEEEeC
Confidence            999999998889999974

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=99.84  E-value=9.2e-21  Score=171.49  Aligned_cols=197  Identities=19%  Similarity=0.260  Sum_probs=147.7

Q ss_pred             cccceeEEEEccc--CCCc--cEEEee-eccCCC-CCCCcEEEEEEEEecChHHHHHHcCCCCCCC--CCCCcccCceE-
Q 023571           80 VPSEMKAWLYGEY--GGVD--VLKFDE-KVTVPQ-VKEDQVLIKVVAAALNPVDGKRRQGKFKATD--SPLPTVPGYDV-  150 (280)
Q Consensus        80 ~p~~mka~~~~~~--g~~~--~l~l~~-~~~~p~-~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~--~~~P~i~G~e~-  150 (280)
                      ||.+||++++...  +.++  .+++++ +.+.|. |++|||||||.++|+|+.|+. +.|.+....  ..+|.++|||+ 
T Consensus         1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~~-~~g~~~~~~~~~~~p~v~G~e~~   79 (345)
T 2j3h_A            1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRI-RMGKPDPSTAALAQAYTPGQPIQ   79 (345)
T ss_dssp             CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHHH-HHBC---------CCCCTTSBCE
T ss_pred             CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHHh-hcccCCCCccccCCCcCCCCeee
Confidence            5778999999876  5565  688762 567776 899999999999999998864 445442110  23577888865 


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus        80 G~~~~GvV~~~v~~~~vGdrV~~~g~~aey~~v~~~~~~~~~ip~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~v  159 (345)
T 2j3h_A           80 GYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETV  159 (345)
T ss_dssp             EEEEEEEEEECSTTCCTTCEEEEEEESBSEEEECCCTTTCEEECCCSSCTTGGGTTTSHHHHHHHHHHHTTSCCCTTCEE
T ss_pred             cceEEEEEecCCCCCCCCCEEEeecCceeEEEecccccceeecCCCCCCHHHHHHhccccHHHHHHHHHHHhCCCCCCEE
Confidence                                                                                            


Q ss_pred             -------------------------EEecChhhHHHHH-hCCCCEEEeCCCC-CccccC-----CCccEEEeCCC--CHH
Q 023571          151 -------------------------AATSSTRNLEFLK-SLGADLAIDYTKD-NFEDLP-----EKFDVVYDAIG--QCD  196 (280)
Q Consensus       151 -------------------------~~~~s~~~~~~l~-~lga~~vid~~~~-~~~~~~-----~g~DvV~d~~g--~~~  196 (280)
                                               +++.+++++++++ ++|+++++|+.+. ++.+..     +++|++|||+|  .++
T Consensus       160 lI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~  239 (345)
T 2j3h_A          160 YVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLD  239 (345)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCHHHHH
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCCHHHHH
Confidence                                     5566788999998 7999999999864 544322     57999999999  588


Q ss_pred             HHHhccccCCEEEEEcCCCC------CCc----------eEEEEe-------ecHHHHHHHHHHHHCCCceeecCCCccc
Q 023571          197 RAVKAIKEGGTVVALTGAVT------PPG----------FRFVVT-------SNGEVLKKLNPYLESGKVKPIIDPKGPF  253 (280)
Q Consensus       197 ~~l~~l~~gG~vV~~g~~~~------~~~----------~~~~~~-------~~~~~l~~l~~ll~~G~l~~~~~~~~~~  253 (280)
                      .++++|+++|+++.+|....      ...          +.+...       ...+.++++++++++|++++.+..  +|
T Consensus       240 ~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~--~~  317 (345)
T 2j3h_A          240 AVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDV--AD  317 (345)
T ss_dssp             HHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEE--EE
T ss_pred             HHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcCcccc--cC
Confidence            99999999999999986431      101          111110       123558999999999999976653  79


Q ss_pred             chhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          254 PFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       254 ~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      +|+++.+|++.+++++..||+||.++
T Consensus       318 ~l~~~~~A~~~~~~~~~~gKvvv~~~  343 (345)
T 2j3h_A          318 GLEKAPEALVGLFHGKNVGKQVVVVA  343 (345)
T ss_dssp             SGGGSHHHHHHHHTTCCSSEEEEESS
T ss_pred             CHHHHHHHHHHHHcCCCceEEEEEeC
Confidence            99999999999999998999999875

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=99.81  E-value=7.7e-20  Score=166.43  Aligned_cols=184  Identities=20%  Similarity=0.215  Sum_probs=141.5

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCC---CcccCce-----------
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPL---PTVPGYD-----------  149 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~---P~i~G~e-----------  149 (280)
                      |||+++.+++.+  ++++ +.|.|+|++|||||||.++|||++|++++.|.++.  ..+   |.++|||           
T Consensus         1 MkA~~~~~~~~~--l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~~~p~v~G~E~~GV~~vG~~~   75 (357)
T 2b5w_A            1 MKAIAVKRGEDR--PVVI-EKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG--FPEGEDHLVLGHEAVGVVVDPNDT   75 (357)
T ss_dssp             CEEEEEETTCSS--CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT--SCTTCSEEECCSEEEEEEEECTTS
T ss_pred             CeEEEEeCCCCc--eEEE-ECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC--CCCCCCCcccCceeEEEEEECCCC
Confidence            899999887753  7888 99999999999999999999999999999886531  112   2222221           


Q ss_pred             ----------------------------------------------E---------------------------------
Q 023571          150 ----------------------------------------------V---------------------------------  150 (280)
Q Consensus       150 ----------------------------------------------~---------------------------------  150 (280)
                                                                    +                                 
T Consensus        76 ~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~aal~~~~~ta  155 (357)
T 2b5w_A           76 ELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQAELGFLIEPISIT  155 (357)
T ss_dssp             SCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGSTTGGGHHHHHHH
T ss_pred             CCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcchhhhhhchHHHH
Confidence                                                          1                                 


Q ss_pred             ------------------------------------------------EEecChh---hHHHHHhCCCCEEEeCCCCCcc
Q 023571          151 ------------------------------------------------AATSSTR---NLEFLKSLGADLAIDYTKDNFE  179 (280)
Q Consensus       151 ------------------------------------------------~~~~s~~---~~~~l~~lga~~vid~~~~~~~  179 (280)
                                                                      +++.+++   |+++++++|++++ |++++++.
T Consensus       156 ~~al~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~~~~~  234 (357)
T 2b5w_A          156 EKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQTPVE  234 (357)
T ss_dssp             HHHHHHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTTSCGG
T ss_pred             HHHHHhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCccCHH
Confidence                                                            3334556   7888999999998 98887765


Q ss_pred             ccC----CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCC-CCCce--------------EEE--EeecHHHHHHHH
Q 023571          180 DLP----EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAV-TPPGF--------------RFV--VTSNGEVLKKLN  235 (280)
Q Consensus       180 ~~~----~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~-~~~~~--------------~~~--~~~~~~~l~~l~  235 (280)
                      + +    +++|+||||+|   .++.++++|+++|+++.+|... ....+              .+.  .....+++++++
T Consensus       235 ~-i~~~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  313 (357)
T 2b5w_A          235 D-VPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHFEAAT  313 (357)
T ss_dssp             G-HHHHSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCCHHHHHHHH
T ss_pred             H-HHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCCHHHHHHHH
Confidence            5 3    38999999999   3689999999999999998765 22111              111  122468899999


Q ss_pred             HHHHCC--C-ceeecCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 023571          236 PYLESG--K-VKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI  279 (280)
Q Consensus       236 ~ll~~G--~-l~~~~~~~~~~~l~~v~~A~~~l~~~~~~gkvVv~~~  279 (280)
                      +++++|  + +++.+.  ++|+|+++++|++.+   +..||+||+++
T Consensus       314 ~l~~~g~~~~~~~~i~--~~~~l~~~~~A~~~~---~~~gKvvi~~~  355 (357)
T 2b5w_A          314 VTFTKLPKWFLEDLVT--GVHPLSEFEAAFDDD---DTTIKTAIEFS  355 (357)
T ss_dssp             HHHHHSCHHHHHHHEE--EEEEGGGGGGGGCCS---TTCCEEEEECC
T ss_pred             HHHHhCchhhhhhhcc--eeecHHHHHHHHHHh---CCCceEEEEec
Confidence            999999  8 566654  489999999999988   34689999875

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=99.78  E-value=6.3e-19  Score=160.88  Aligned_cols=124  Identities=16%  Similarity=0.144  Sum_probs=89.9

Q ss_pred             EEecCh---hhHHHHHhCCCCEEEeCCCCCccccC----CCccEEEeCCC---CH-HHHHhccccCCEEEEEcCCCCC-C
Q 023571          151 AATSST---RNLEFLKSLGADLAIDYTKDNFEDLP----EKFDVVYDAIG---QC-DRAVKAIKEGGTVVALTGAVTP-P  218 (280)
Q Consensus       151 ~~~~s~---~~~~~l~~lga~~vid~~~~~~~~~~----~g~DvV~d~~g---~~-~~~l~~l~~gG~vV~~g~~~~~-~  218 (280)
                      +++.++   +++++++++|++++ | ++ ++.+.+    +++|+||||+|   .+ +.++++|+++|++|.+|..... .
T Consensus       209 ~~~~~~~~~~~~~~~~~~ga~~v-~-~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~  285 (366)
T 2cdc_A          209 MANRREPTEVEQTVIEETKTNYY-N-SS-NGYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSV  285 (366)
T ss_dssp             EEESSCCCHHHHHHHHHHTCEEE-E-CT-TCSHHHHHHHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEE
T ss_pred             EEeCCccchHHHHHHHHhCCcee-c-hH-HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCcc
Confidence            344455   66677777888777 7 54 543332    57999999998   26 8999999999999999876543 1


Q ss_pred             ceE-------------EE--EeecHHHHHHHHHHHHCCCce------eecCCCcccchhhHHHHHHHH-HhCCCCeeEEE
Q 023571          219 GFR-------------FV--VTSNGEVLKKLNPYLESGKVK------PIIDPKGPFPFSQVVEAFSYI-ETNKATGKVVI  276 (280)
Q Consensus       219 ~~~-------------~~--~~~~~~~l~~l~~ll~~G~l~------~~~~~~~~~~l~~v~~A~~~l-~~~~~~gkvVv  276 (280)
                      .++             +.  .....+.++++++++++|+++      +.+.  ++|+|+++++|++.+ .+++..||+||
T Consensus       286 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~--~~~~l~~~~~A~~~l~~~~~~~gKvvi  363 (366)
T 2cdc_A          286 PLDYKTLQEIVHTNKTIIGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLIT--KTVSINDEKELLKVLREKEHGEIKIRI  363 (366)
T ss_dssp             EEEHHHHHHHHHTTCEEEECCCCCHHHHHHHHHHHHHHHHHSHHHHTTSEE--EEEETTCHHHHHHHHHCCCTTCCEEEE
T ss_pred             ccChhhhHHHHhcCcEEEEecCCCHHHHHHHHHHHHcCCCCcccchhhcEE--EEEcHHHHHHHHHHHhhhcCCceEEEE
Confidence            111             11  112468899999999999954      4443  589999999999994 34666799999


Q ss_pred             EeC
Q 023571          277 HPI  279 (280)
Q Consensus       277 ~~~  279 (280)
                      +++
T Consensus       364 ~~~  366 (366)
T 2cdc_A          364 LWE  366 (366)
T ss_dssp             ECC
T ss_pred             ecC
Confidence            864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.57  E-value=9.6e-15  Score=159.76  Aligned_cols=189  Identities=20%  Similarity=0.251  Sum_probs=141.2

Q ss_pred             EEcccCCCccEEEeeeccCCC-C--CCCcEEEEEEEEecChHHHHHHcCCCCCC-----CCCCCcccCceE---------
Q 023571           88 LYGEYGGVDVLKFDEKVTVPQ-V--KEDQVLIKVVAAALNPVDGKRRQGKFKAT-----DSPLPTVPGYDV---------  150 (280)
Q Consensus        88 ~~~~~g~~~~l~l~~~~~~p~-~--~~~eVlVkV~aagl~~~D~~~~~g~~~~~-----~~~~P~i~G~e~---------  150 (280)
                      ....+|..+.+.+. +.+... +  .++||+|+|.++|+|+.|+++..|.++..     ....|.++|+|+         
T Consensus      1534 ~~~~~g~l~sl~~~-~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~vGdr 1612 (2512)
T 2vz8_A         1534 NVLSRGDLSSIRWV-CSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDASGRR 1612 (2512)
T ss_dssp             EESSTTCTTSEEEE-ECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEETTSCC
T ss_pred             EccCCCCcCceEEE-ecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEccCCE
Confidence            34445666678888 555433 3  38999999999999999999999987521     112456889887         


Q ss_pred             --------------------------------------------------------------------------------
Q 023571          151 --------------------------------------------------------------------------------  150 (280)
Q Consensus       151 --------------------------------------------------------------------------------  150 (280)
                                                                                                      
T Consensus      1613 V~g~~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~G 1692 (2512)
T 2vz8_A         1613 VMGMVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRG 1692 (2512)
T ss_dssp             EEEECSSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTT
T ss_pred             EEEeecCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcC
Confidence                                                                                            


Q ss_pred             ----EEecChhhHHHHHh----CCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCC
Q 023571          151 ----AATSSTRNLEFLKS----LGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGA  214 (280)
Q Consensus       151 ----~~~~s~~~~~~l~~----lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~  214 (280)
                          +++.+++|++++++    +|+++++++++.++.+.      .+|+|+||||+|  .++.++++|+++|++|.+|..
T Consensus      1693 a~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr~V~iG~~ 1772 (2512)
T 2vz8_A         1693 CRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKF 1772 (2512)
T ss_dssp             CEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEEEEECCCH
T ss_pred             CEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcEEEEeecc
Confidence                66678899999986    79999999998877653      258999999988  689999999999999999853


Q ss_pred             CCC-----------CceEEEEe-----------ecHHHHHHHHHHHHCCCceeecCCCcccchhhHHHHHHHHHhCCCCe
Q 023571          215 VTP-----------PGFRFVVT-----------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATG  272 (280)
Q Consensus       215 ~~~-----------~~~~~~~~-----------~~~~~l~~l~~ll~~G~l~~~~~~~~~~~l~~v~~A~~~l~~~~~~g  272 (280)
                      ...           ..+.+...           ...+.++.+.+++++|.+++.+.  ++|+++++.+|++.+.+++..|
T Consensus      1773 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~--~~f~l~ei~eA~~~l~~g~~~G 1850 (2512)
T 2vz8_A         1773 DLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKC--TVFPRTKVEAAFRYMAQGKHIG 1850 (2512)
T ss_dssp             HHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCE--EEEESSTHHHHHHHHHTTCCSS
T ss_pred             cccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcc--eEecHHHHHHHHHhhhccCccc
Confidence            210           11112111           01234455555666888887654  4999999999999999999899


Q ss_pred             eEEEEeC
Q 023571          273 KVVIHPI  279 (280)
Q Consensus       273 kvVv~~~  279 (280)
                      |+||+++
T Consensus      1851 KvVi~~~ 1857 (2512)
T 2vz8_A         1851 KVVIQVR 1857 (2512)
T ss_dssp             EEEEECS
T ss_pred             eEEEECC
Confidence            9999874

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.36  E-value=4.5e-07  Score=74.73  Aligned_cols=102  Identities=22%  Similarity=0.326  Sum_probs=74.5

Q ss_pred             CceE-EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCC-
Q 023571          147 GYDV-AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVT-  216 (280)
Q Consensus       147 G~e~-~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~-  216 (280)
                      |.++ +++.++++.+.++++|++.++|+.++++.+.      .+++|++|||+|  .++.++++|+++|++|.+|.... 
T Consensus        63 G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~  142 (198)
T 1pqw_A           63 GARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVY  142 (198)
T ss_dssp             TCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGT
T ss_pred             CCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCc
Confidence            4444 5567778888999999999999987765432      147999999998  57899999999999999987541 


Q ss_pred             -CC---------ceEEEE---------ee--cHHHHHHHHHHHHCCCceeecC
Q 023571          217 -PP---------GFRFVV---------TS--NGEVLKKLNPYLESGKVKPIID  248 (280)
Q Consensus       217 -~~---------~~~~~~---------~~--~~~~l~~l~~ll~~G~l~~~~~  248 (280)
                       ..         .+.+..         ..  ..+.++++++++++|++++.+.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~  195 (198)
T 1pqw_A          143 ADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLPV  195 (198)
T ss_dssp             TTCEEEGGGGTTTCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCC
T ss_pred             CcCcCChhHhcCCcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCCC
Confidence             11         112221         11  1467889999999999987654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=93.88  E-value=0.015  Score=52.35  Aligned_cols=65  Identities=14%  Similarity=0.166  Sum_probs=48.5

Q ss_pred             EEecChhhHHHHHhCCCCE--EEeCCCCCccccCCCccEEEeCCC--C-------HHHHHhccccCCEEEEEcCCC
Q 023571          151 AATSSTRNLEFLKSLGADL--AIDYTKDNFEDLPEKFDVVYDAIG--Q-------CDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~--vid~~~~~~~~~~~g~DvV~d~~g--~-------~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      +++.++++++.++++|++.  ++++...++.+..+++|+||+|++  .       .+..++.++++|+++.++...
T Consensus       195 v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~  270 (361)
T 1pjc_A          195 IFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQ  270 (361)
T ss_dssp             EEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             EEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCC
Confidence            5667788888888766543  455544445555578999999987  2       467899999999999998654

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=90.77  E-value=0.16  Score=45.52  Aligned_cols=65  Identities=15%  Similarity=0.255  Sum_probs=44.9

Q ss_pred             EEecChhhHHHHHh-CCCCEEEeCCC-CCccccCCCccEEEeCCC--C-------HHHHHhccccCCEEEEEcCCC
Q 023571          151 AATSSTRNLEFLKS-LGADLAIDYTK-DNFEDLPEKFDVVYDAIG--Q-------CDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       151 ~~~~s~~~~~~l~~-lga~~vid~~~-~~~~~~~~g~DvV~d~~g--~-------~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      +.+.++++.+.+++ +|++...+..+ .++.+..+++|+|++|+|  .       .+.+++.++++|.+|.++...
T Consensus       194 ~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~  269 (369)
T 2eez_A          194 ILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQ  269 (369)
T ss_dssp             EEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC---
T ss_pred             EEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEecCC
Confidence            55667778777765 78764343332 334444578999999987  2       478899999999999997654

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=88.85  E-value=0.22  Score=44.86  Aligned_cols=63  Identities=17%  Similarity=0.252  Sum_probs=45.0

Q ss_pred             EEecChhhHHHHHh-CCCCEEEeC-CCCCccccCCCccEEEeCCC---C------HHHHHhccccCCEEEEEcC
Q 023571          151 AATSSTRNLEFLKS-LGADLAIDY-TKDNFEDLPEKFDVVYDAIG---Q------CDRAVKAIKEGGTVVALTG  213 (280)
Q Consensus       151 ~~~~s~~~~~~l~~-lga~~vid~-~~~~~~~~~~g~DvV~d~~g---~------~~~~l~~l~~gG~vV~~g~  213 (280)
                      +.+.++++++.+++ +|++..+++ ...++.+..+++|+|++|++   .      .+..++.++++|.+|.++.
T Consensus       196 ~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~  269 (377)
T 2vhw_A          196 VLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAI  269 (377)
T ss_dssp             EEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred             EEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEec
Confidence            55667777777766 777643332 22334444568999999986   2      5788999999999999984

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=87.97  E-value=0.32  Score=43.81  Aligned_cols=63  Identities=21%  Similarity=0.299  Sum_probs=44.2

Q ss_pred             EEecChhhHHHHHhCCCCEE-EeCCC---------------CC--------ccccCCCccEEEeCC---C--C---H-HH
Q 023571          151 AATSSTRNLEFLKSLGADLA-IDYTK---------------DN--------FEDLPEKFDVVYDAI---G--Q---C-DR  197 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~v-id~~~---------------~~--------~~~~~~g~DvV~d~~---g--~---~-~~  197 (280)
                      +.+.++++++.++++|++.+ ++..+               ++        +.+..+++|+|++|+   |  .   + ..
T Consensus       200 ~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~  279 (384)
T 1l7d_A          200 ATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEE  279 (384)
T ss_dssp             EECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHH
T ss_pred             EEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCCCCEEEECCccCCCCCCeeeCHH
Confidence            55567788888888998755 23321               01        333447899999998   5  2   2 78


Q ss_pred             HHhccccCCEEEEEcC
Q 023571          198 AVKAIKEGGTVVALTG  213 (280)
Q Consensus       198 ~l~~l~~gG~vV~~g~  213 (280)
                      .++.++++|.+|.++.
T Consensus       280 ~l~~mk~g~vivdva~  295 (384)
T 1l7d_A          280 MVTKMKPGSVIIDLAV  295 (384)
T ss_dssp             HHTTSCTTCEEEETTG
T ss_pred             HHhcCCCCCEEEEEec
Confidence            8999999999999984

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=87.94  E-value=0.49  Score=44.24  Aligned_cols=59  Identities=19%  Similarity=0.121  Sum_probs=44.7

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCccccCCCccEEEeCCC---CHH-HHHhccccCCEEEEEcCCC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG---QCD-RAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~~g~DvV~d~~g---~~~-~~l~~l~~gG~vV~~g~~~  215 (280)
                      ++..++.+.+.++++|++ ++     ++.+..+++|+|++|+|   .+. ..++.++++|+++.+|...
T Consensus       302 v~d~~~~~~~~A~~~Ga~-~~-----~l~e~l~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          302 VTEIDPINALQAMMEGFD-VV-----TVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             EECSCHHHHHHHHHTTCE-EC-----CHHHHGGGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred             EEeCCHHHHHHHHHcCCE-Ee-----cHHHHHhCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence            455567777888888985 32     23344578999999998   244 8899999999999998754

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=81.71  E-value=11  Score=30.09  Aligned_cols=78  Identities=17%  Similarity=0.061  Sum_probs=49.9

Q ss_pred             EEecChhhHHHHHh----CCCC---EEEeCCCCCccccCCCccEEEeCCC----CHHHHHhccccCCEEEEEcCCCCCCc
Q 023571          151 AATSSTRNLEFLKS----LGAD---LAIDYTKDNFEDLPEKFDVVYDAIG----QCDRAVKAIKEGGTVVALTGAVTPPG  219 (280)
Q Consensus       151 ~~~~s~~~~~~l~~----lga~---~vid~~~~~~~~~~~g~DvV~d~~g----~~~~~l~~l~~gG~vV~~g~~~~~~~  219 (280)
                      +++.+++..+.+++    +|..   .++..+..+.......+|+||...+    .++.+.++|++||+++....      
T Consensus        82 ~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~------  155 (204)
T 3njr_A           82 TIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV------  155 (204)
T ss_dssp             EEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC------
T ss_pred             EEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec------
Confidence            66777877776654    4544   3343333332222357999997655    26788889999999997644      


Q ss_pred             eEEEEeecHHHHHHHHHHHHCC
Q 023571          220 FRFVVTSNGEVLKKLNPYLESG  241 (280)
Q Consensus       220 ~~~~~~~~~~~l~~l~~ll~~G  241 (280)
                             ..+.+.++.+++++.
T Consensus       156 -------~~~~~~~~~~~l~~~  170 (204)
T 3njr_A          156 -------TLESETLLTQLHARH  170 (204)
T ss_dssp             -------SHHHHHHHHHHHHHH
T ss_pred             -------CcccHHHHHHHHHhC
Confidence                   335666776666653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	280
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	1e-11
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	5e-09
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	7e-09
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	9e-09
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	4e-08
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	2e-07
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	3e-07
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	2e-06
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	3e-06
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	3e-06
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	7e-06
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	7e-06
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	9e-06
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	2e-05
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	2e-05
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	6e-05
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	7e-05
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	1e-04
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	2e-04
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	3e-04
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	5e-04
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	0.001
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	0.001

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (142), Expect = 1e-11
 Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           M+A    E+GG +VLK    + VP  K+ QVLIKV A  +NPV+   R G +      LP
Sbjct: 3   MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS-RKPLLP 61

Query: 144 TVPGYDV 150
             PG DV
Sbjct: 62  YTPGSDV 68

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 51.8 bits (123), Expect = 5e-09
 Identities = 9/54 (16%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 82  SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF 135
           S  +A++  +            +++  + E  VL++V  +++N  DG       
Sbjct: 2   SAFQAFVVNKTETEFTAGVQT-ISMDDLPEGDVLVRVHYSSVNYKDGLASIPDG 54

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 51.9 bits (123), Expect = 7e-09
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 9/76 (11%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDS--- 140
           M+A    E G    L   +++ VP+ K  QVLIKV AA +   D   RQG+F        
Sbjct: 1   MRAVRLVEIGKPLSL---QEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVED 57

Query: 141 ---PLPTVPGYDVAAT 153
               LP   G+++A  
Sbjct: 58  LGVKLPVTLGHEIAGK 73

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 51.8 bits (123), Expect = 9e-09
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)

Query: 79  TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT 138
           T+P  MKA +   YG    +   E+V VP     QVL+K+ A+ +   D    +G +   
Sbjct: 1   TLPQTMKAAVVHAYGAPLRI---EEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVK 57

Query: 139 DSPLPTVPGYDV 150
               P +PG++ 
Sbjct: 58  PPL-PFIPGHEG 68

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 49.8 bits (117), Expect = 4e-08
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 84  MKAWLYGEYGG-VDVLKF-DEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF 135
            +A LY ++G   DVL     ++    +  ++V++K + + +NP D  + QG +
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVY 57

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 47.2 bits (111), Expect = 2e-07
 Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQ 132
            +A    +      +     ++   + +D VLIKV  + +N  DG   +
Sbjct: 4   FQALQAEKNADDVSVHVKT-ISTEDLPKDGVLIKVAYSGINYKDGLAGK 51

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.5 bits (112), Expect = 3e-07
 Identities = 10/73 (13%), Positives = 25/73 (34%), Gaps = 3/73 (4%)

Query: 79  TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT 138
           + P + +      +      K  +        +  + IK+ A  +   D     G +   
Sbjct: 2   SYPEKFEGIAIQSHEDWKNPKKTK-YDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG-- 58

Query: 139 DSPLPTVPGYDVA 151
           +  +P V G+++ 
Sbjct: 59  NMKMPLVVGHEIV 71

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 44.6 bits (104), Expect = 2e-06
 Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 89  YGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF 135
           + ++GG +VL+  E  T     E+++ ++  A  +N +D   R G +
Sbjct: 6   FHKHGGPEVLQAVE-FTPADPAENEIQVENKAIGINFIDTYIRSGLY 51

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 44.2 bits (103), Expect = 3e-06
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 6/70 (8%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGK-RRQGKFKATDSPL 142
           + A LY      + L+ ++   +P+ KED+VL+++    +   D      G+        
Sbjct: 3   LSAVLYK----QNDLRLEQ-RPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKD 57

Query: 143 PTVPGYDVAA 152
           P V G++ + 
Sbjct: 58  PMVIGHEASG 67

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 43.3 bits (101), Expect = 3e-06
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSP 141
           MKAW+    GG   L     +  P+ +E +V+++V A  LN  D   R G +     P
Sbjct: 1   MKAWVLKRLGGPLEL---VDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP 55

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 42.9 bits (100), Expect = 7e-06
 Identities = 9/49 (18%), Positives = 19/49 (38%), Gaps = 1/49 (2%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQ 132
           ++A L  +  G  +      +   ++ E  V + V  ++LN  D     
Sbjct: 1   LQALLLEQQDGKTLASVQT-LDESRLPEGDVTVDVHWSSLNYKDALAIT 48

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 43.0 bits (100), Expect = 7e-06
 Identities = 6/68 (8%), Positives = 17/68 (25%), Gaps = 6/68 (8%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           MK +       +       +   P       +++ +A +              A      
Sbjct: 1   MKGFAMLGINKLGW----IEKERPVAGSYDAIVRPLAVSPCT--SDIHTVFEGALGDRKN 54

Query: 144 TVPGYDVA 151
            + G++  
Sbjct: 55  MILGHEAV 62

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 9e-06
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 3/52 (5%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF 135
            KA +  E G    +   E++ V   K  +V IK++A A+   D     G  
Sbjct: 7   CKAAVAWEAGKPLSI---EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGAD 55

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 2e-05
 Identities = 11/70 (15%), Positives = 29/70 (41%), Gaps = 6/70 (8%)

Query: 81  PSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGK-RRQGKFKATD 139
           P+ +   ++G       L+ +    +P+   ++VL+++ +  +   D      G+     
Sbjct: 6   PNNLSLVVHG----PGDLRLEN-YPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFI 60

Query: 140 SPLPTVPGYD 149
              P V G++
Sbjct: 61  VKKPMVLGHE 70

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 42.2 bits (98), Expect = 2e-05
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 83  EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQ 132
           ++ A +    G    L   + + + Q + D+VL+KVVA  +   D   R 
Sbjct: 3   DIIAAVTPCKGADFEL---QALKIRQPQGDEVLVKVVATGMCHTDLIVRD 49

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 40.6 bits (94), Expect = 6e-05
 Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 10/69 (14%)

Query: 69  STEAEPTKVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDG 128
           ST  +  K        KA +  E      +   E+V V   K  +V IK+VA  +   D 
Sbjct: 1   STAGKVIK-------CKAAVLWEEKKPFSI---EEVEVAPPKAHEVRIKMVATGICRSDD 50

Query: 129 KRRQGKFKA 137
               G    
Sbjct: 51  HVVSGTLVT 59

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 40.6 bits (94), Expect = 7e-05
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 3/61 (4%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
            KA +  E      L   E +TV   K  +V IK++A+ +   D    +    +    + 
Sbjct: 9   CKAAVAWEPHKPLSL---ETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFPVIL 65

Query: 144 T 144
            
Sbjct: 66  G 66

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 39.9 bits (92), Expect = 1e-04
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
            KA +  + G    +   E++ V   K  +V I+V+A  + P D      K KA    + 
Sbjct: 9   CKAAIAWKTGSPLCI---EEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPVVL 65

Query: 144 T 144
            
Sbjct: 66  G 66

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 5/49 (10%), Positives = 20/49 (40%), Gaps = 3/49 (6%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQ 132
             A +  ++    V    ++  +  +    +L+++++A +   D    +
Sbjct: 5   AHAMVLEKFNQPLVY---KEFEISDIPRGSILVEILSAGVCGSDVHMFR 50

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 38.7 bits (89), Expect = 3e-04
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 84  MKAWLYGEYGGVDVLKFDE---KVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA 137
            +  +Y   G V+V K D    +    +  E  V++KVV+  +   D    +G+  A
Sbjct: 2   NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA 58

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 38.0 bits (87), Expect = 5e-04
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 3/42 (7%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNP 125
            KA +  E     V+   E++ V     +++ IK++A  +  
Sbjct: 9   CKAAVAWEANKPLVI---EEIEVDVPHANEIRIKIIATGVCH 47

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 36.5 bits (83), Expect = 0.001
 Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
           MKA +  ++     +   ++V  P +   +VL+++ A  +   D              LP
Sbjct: 1   MKAAVVEQFKEPLKI---KEVEKPTISYGEVLVRIKACGVCHTDLHAAH-GDWPVKPKLP 56

Query: 144 TVPGYDVA 151
            +PG++  
Sbjct: 57  LIPGHEGV 64

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 36.5 bits (83), Expect = 0.001
 Identities = 9/52 (17%), Positives = 22/52 (42%), Gaps = 3/52 (5%)

Query: 84  MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF 135
           +KA   G Y     L+  + +T  +   + V I++    +   D  + + ++
Sbjct: 1   IKA--VGAYSAKQPLEPMD-ITRREPGPNDVKIEIAYCGVCHSDLHQVRSEW 49

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	280
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.48
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.4
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.37
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.36
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.35
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.33
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.32
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.32
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.32
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.31
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.3
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.3
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.3
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.26
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.24
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.22
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.2
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.19
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.16
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.16
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.03
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	98.98
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	98.98
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	98.97
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	98.97
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	98.96
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	98.95
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	98.94
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.94
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	98.93
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	98.93
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	98.9
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.89
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.86
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.86
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.84
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	98.83
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	98.8
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	98.75
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.74
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	98.7
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	98.64
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	98.62
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	98.59
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	98.57
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	98.56
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	98.52
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.51
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	98.51
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	98.48
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	98.32
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	98.17
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	97.8
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.2
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	81.93
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	81.4
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	80.32

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.48  E-value=3.4e-14  Score=114.46  Aligned_cols=69  Identities=33%  Similarity=0.563  Sum_probs=62.8

Q ss_pred             CcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceEE
Q 023571           79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVA  151 (280)
Q Consensus        79 ~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~~  151 (280)
                      ++|.+|||+++.++|.+  ++++ ++|.|.|++|||||||.++|||++|++.++|.++ ....+|.++|||++
T Consensus         1 ~~P~tMkA~v~~~~g~p--l~l~-evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~-~~~~~P~i~GhE~~   69 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAP--LRIE-EVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWP-VKPPLPFIPGHEGV   69 (175)
T ss_dssp             CCCSEEEEEEBCSTTSC--CEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSS-SCCCSSBCCCSCEE
T ss_pred             CcchhcEEEEEEeCCCC--CEEE-EeECCCCCCCEEEEEEEEecCcccchhhhccCcc-ccccCCcCCCCcce
Confidence            47999999999999877  7888 9999999999999999999999999999999886 35678999999993

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.40  E-value=2.4e-13  Score=110.28  Aligned_cols=67  Identities=16%  Similarity=0.326  Sum_probs=61.2

Q ss_pred             cccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceEE
Q 023571           80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVA  151 (280)
Q Consensus        80 ~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~~  151 (280)
                      |+.+|||+++.+++++  ++++ +++.|+|++|||||||.++|||++|++++.|.++  ...+|.++|||++
T Consensus         1 m~~k~kA~v~~~~~~p--l~i~-ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~--~~~~P~vlGHE~~   67 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQP--LVYK-EFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP--RVPLPIILGHEGA   67 (184)
T ss_dssp             CCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT--TCCSSBCCCCEEE
T ss_pred             CCceEEEEEEecCCCC--cEEE-EeeCCCCCCCEEEEEEEEECCCCCchhheeccCC--ccccccccceeee
Confidence            5778999999998877  8899 9999999999999999999999999999999886  4578999999993

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.37  E-value=7.3e-13  Score=101.58  Aligned_cols=66  Identities=33%  Similarity=0.578  Sum_probs=59.6

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceEEEe
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAAT  153 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~~~~  153 (280)
                      |||+++.++|++  ++++ +.+.|.|++|||+|||+++|||+.|++.+.|.++ ....+|.++|||++.+
T Consensus         1 MkA~~~~~~G~~--l~~~-e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~-~~~~~P~v~G~E~~G~   66 (131)
T d1iz0a1           1 MKAWVLKRLGGP--LELV-DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYL-TRLHPPFIPGMEVVGV   66 (131)
T ss_dssp             CEEEEECSTTSC--EEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS-SCCCSSBCCCCEEEEE
T ss_pred             CcEEEEccCCCC--CEEE-EccCCCCCCCEEEEEEEEEecccccccccccccc-ccccceeEeeeeeEEe
Confidence            899999999876  8899 9999999999999999999999999999999886 3557899999999433

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.36  E-value=4.7e-13  Score=110.16  Aligned_cols=66  Identities=26%  Similarity=0.270  Sum_probs=60.4

Q ss_pred             CcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE
Q 023571           79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV  150 (280)
Q Consensus        79 ~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~  150 (280)
                      .-|.+|||+++.+++.+  ++++ ++|.|+|++|||||||.++|||++|+++++|.++   ..+|.++|||+
T Consensus         4 ~~~~~~KAaV~~~~g~p--l~i~-evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~---~~~P~v~GHE~   69 (202)
T d1e3ia1           4 GKVIKCKAAIAWKTGSP--LCIE-EIEVSPPKACEVRIQVIATCVCPTDINATDPKKK---ALFPVVLGHEC   69 (202)
T ss_dssp             TSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC---CCSSBCCCCEE
T ss_pred             CCeEEEEEEEEccCCCC--CEEE-EEECCCCCCCEEEEEEEEEEEeccccceeeeecc---ccccccccccc
Confidence            45778999999999877  8889 9999999999999999999999999999999875   57899999999

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.35  E-value=6.8e-13  Score=108.81  Aligned_cols=65  Identities=25%  Similarity=0.242  Sum_probs=59.8

Q ss_pred             ccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE
Q 023571           81 PSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV  150 (280)
Q Consensus        81 p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~  150 (280)
                      ..+|||+++.++|++  |+++ ++|.|+|++|||||||.++|||++|+++++|.++  ...+|.++|||+
T Consensus         4 ~~~~kAav~~~~g~~--l~i~-evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~--~~~~p~v~GhE~   68 (197)
T d2fzwa1           4 VIKCKAAVAWEAGKP--LSIE-EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP--EGCFPVILGHLG   68 (197)
T ss_dssp             CEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT--TCCSSBCCCCEE
T ss_pred             ceEEEEEEEccCCCC--CEEE-EEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcc--cccccccCCcce
Confidence            456999999999887  8999 9999999999999999999999999999999875  467899999999

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.9e-12  Score=101.54  Aligned_cols=67  Identities=43%  Similarity=0.646  Sum_probs=61.1

Q ss_pred             ceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE
Q 023571           83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV  150 (280)
Q Consensus        83 ~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~  150 (280)
                      .|||++++++|+++.+++..+.+.|+|++|||||||.++|||+.|++.+.|.++ ....+|.++|||+
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~-~~~~~p~i~G~e~   68 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS-RKPLLPYTPGSDV   68 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSS-CCCCSSBCCCSCE
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcC-ccccccccCccce
Confidence            499999999999989998747899999999999999999999999999999886 3567899999999

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.32  E-value=7.8e-13  Score=103.99  Aligned_cols=69  Identities=23%  Similarity=0.299  Sum_probs=61.8

Q ss_pred             cceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceEEE
Q 023571           82 SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAA  152 (280)
Q Consensus        82 ~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~~~  152 (280)
                      ++|||+++.+++++..++++ +.+.|+|++|||||||+|+|||++|++.+.|.++ .....|.++|+|++.
T Consensus         2 ~~~KA~v~~~~~~~~~~~i~-~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~-~~~~~p~v~g~e~~G   70 (152)
T d1xa0a1           2 SAFQAFVVNKTETEFTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGK-IVKTYPFVPGIDLAG   70 (152)
T ss_dssp             CEEEEEEEEEETTEEEEEEE-EEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGS-SCCSSSBCCCSEEEE
T ss_pred             CceEEEEEEecCCceEEEEE-EccCCCCCCCEEEEEEEEeCCChHHHHHHhhccc-ccccccceeeeeeee
Confidence            57999999999988778899 9999999999999999999999999999999876 355789999999943

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.32  E-value=1.1e-12  Score=107.57  Aligned_cols=64  Identities=23%  Similarity=0.245  Sum_probs=59.1

Q ss_pred             ccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE
Q 023571           81 PSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV  150 (280)
Q Consensus        81 p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~  150 (280)
                      ..+|||+++.+++.+  |+++ +++.|+|++|||||||.|+|||++|+++++|.++   ..+|.++|||+
T Consensus         6 ~~~~KAav~~~~g~~--l~i~-ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~---~~~P~i~GHE~   69 (198)
T d1p0fa1           6 DITCKAAVAWEPHKP--LSLE-TITVAPPKAHEVRIKILASGICGSDSSVLKEIIP---SKFPVILGHEA   69 (198)
T ss_dssp             CEEEEEEEBSSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC---CCSSBCCCCCE
T ss_pred             ceEEEEEEEccCCCC--CEEE-EEECCCCCCCEEEEEEEEEEEecccceeeeeccc---cccccccceee
Confidence            458999999998876  8999 9999999999999999999999999999999875   47899999999

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.32  E-value=1.1e-12  Score=107.60  Aligned_cols=65  Identities=26%  Similarity=0.334  Sum_probs=59.5

Q ss_pred             cccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE
Q 023571           80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV  150 (280)
Q Consensus        80 ~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~  150 (280)
                      -+.+|||+++.+.+.+  ++++ +++.|+|++|||||||.++|||++|++.+.|.++   ..+|.++|||+
T Consensus         5 ~~~k~KAavl~~~~~~--l~i~-ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~---~~~P~i~GHE~   69 (198)
T d2jhfa1           5 KVIKCKAAVLWEEKKP--FSIE-EVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV---TPLPVIAGHEA   69 (198)
T ss_dssp             SCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC---CCSSBCCCCSE
T ss_pred             CceEEEEEEEecCCCC--CEEE-EEECCCCCCCEEEEEEEEEecccccceeecCCcc---cccceecccce
Confidence            4567999999988876  8899 9999999999999999999999999999999875   47899999999

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.31  E-value=1.3e-12  Score=105.08  Aligned_cols=65  Identities=38%  Similarity=0.484  Sum_probs=58.2

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCC------CCCCCCcccCceEE
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA------TDSPLPTVPGYDVA  151 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~------~~~~~P~i~G~e~~  151 (280)
                      |||+++.++|.+  ++++ |++.|+|++|||||||.++|||++|+++++|.++.      ....+|.++|||++
T Consensus         1 MKA~~~~~~G~p--l~i~-dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~   71 (177)
T d1jvba1           1 MRAVRLVEIGKP--LSLQ-EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIA   71 (177)
T ss_dssp             CEEEEECSTTSC--CEEE-ECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEE
T ss_pred             CeEEEEEeCCCC--CEEE-EeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEE
Confidence            899999999887  8888 99999999999999999999999999999997642      23468999999993

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.30  E-value=3.1e-12  Score=104.38  Aligned_cols=69  Identities=16%  Similarity=0.181  Sum_probs=62.1

Q ss_pred             CcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE
Q 023571           79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV  150 (280)
Q Consensus        79 ~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~  150 (280)
                      ++|.+|||+++..+++...+++. +.+.++++++||||||.|+|||++|++++.|.++  ...+|.++|||+
T Consensus         2 ~~P~~~ka~~~~~~~~~~~~~~~-~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~--~~~~P~i~GHE~   70 (192)
T d1piwa1           2 SYPEKFEGIAIQSHEDWKNPKKT-KYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG--NMKMPLVVGHEI   70 (192)
T ss_dssp             CTTTCEEEEEECCSSSTTSCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTS--CCCSSEECCCCE
T ss_pred             CCCceeEEEEEeCCCcCCcceEe-eccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCC--CCCCCcCccccc
Confidence            57899999999999887778888 7777778999999999999999999999999886  467899999999

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.30  E-value=2e-12  Score=100.96  Aligned_cols=66  Identities=26%  Similarity=0.342  Sum_probs=58.2

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceEE
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVA  151 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~~  151 (280)
                      |||+++.+++++..++++ +++.|+|++|||+|||.|+|||+.|++.+.|.++ ....+|.++|+|++
T Consensus         1 MkA~v~~~~~~~~~l~i~-~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~-~~~~~p~v~G~e~~   66 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQ-TLDESRLPEGDVTVDVHWSSLNYKDALAITGKGK-IIRNFPMIPGIDFA   66 (146)
T ss_dssp             CEEEEEECC---CEEEEE-ECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSS-CCCSSSBCCCSEEE
T ss_pred             CeEEEEEcCCCceEEEEE-EcCCCCCCCCEEEEEEeeccCccceeeEEEeecc-cccccceecccccc
Confidence            899999999998889999 9999999999999999999999999999999876 35678999999993

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.30  E-value=2.3e-12  Score=104.02  Aligned_cols=62  Identities=18%  Similarity=0.180  Sum_probs=57.6

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~  150 (280)
                      |||+....++++  |+++ |++.|+|++|||||||.++|||++|++.+.|.++  ...+|.++|||+
T Consensus         1 m~a~~~~~~~~p--l~i~-ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~--~~~~P~i~GhE~   62 (179)
T d1uufa1           1 IKAVGAYSAKQP--LEPM-DITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA--GTVYPCVPGHEI   62 (179)
T ss_dssp             CEEEEBSSTTSC--CEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTS--CCCSSBCCCCCE
T ss_pred             CeEEEEccCCCC--CEEE-EecCCCCCCCEEEEEEEEECCCCCcceeeeeeec--cccccccccccc
Confidence            899999988877  8999 9999999999999999999999999999999875  457899999999

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.26  E-value=4.2e-12  Score=103.76  Aligned_cols=63  Identities=29%  Similarity=0.389  Sum_probs=57.9

Q ss_pred             cceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE
Q 023571           82 SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV  150 (280)
Q Consensus        82 ~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~  150 (280)
                      .+|+|+++.+.+.+  |+++ +++.|+|++|||||||.++|||++|++++.|.++   ..+|.++|||+
T Consensus         2 k~~~Aav~~~~g~~--l~l~-~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~---~~~P~i~GHE~   64 (194)
T d1f8fa1           2 KDIIAAVTPCKGAD--FELQ-ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP---VPLPAVLGHEG   64 (194)
T ss_dssp             EEEEEEEBCSTTCC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC---CCSSBCCCCEE
T ss_pred             ceeEEEEEcCCCCC--cEEE-EeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc---ccCCcccccce
Confidence            46899999988766  8999 9999999999999999999999999999999875   47899999999

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.24  E-value=6.5e-12  Score=100.33  Aligned_cols=63  Identities=25%  Similarity=0.444  Sum_probs=57.0

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~  150 (280)
                      |||+++.+++.+  ++++ +++.|+|++|||||||+++|||++|++.+.+.+. ....+|.++|||+
T Consensus         1 MkA~v~~~~g~p--l~i~-~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~-~~~~~p~v~GhE~   63 (171)
T d1rjwa1           1 MKAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP-VKPKLPLIPGHEG   63 (171)
T ss_dssp             CEEEEBSSTTSC--CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS-SCCCSSBCCCSCE
T ss_pred             CeEEEEecCCCC--cEEE-EeECCCCCCCeEEEEEEEeeccccceeeeecccc-cccccccccCCEE
Confidence            899999998876  8899 9999999999999999999999999998887654 3567899999999

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.22  E-value=9e-12  Score=102.11  Aligned_cols=67  Identities=18%  Similarity=0.124  Sum_probs=59.7

Q ss_pred             CcccceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE
Q 023571           79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV  150 (280)
Q Consensus        79 ~~p~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~  150 (280)
                      ..+.++||+++.+++.+  ++++ |++.|+|++|||||||.|+|||++|++.+.|..+  ...+|.++|||+
T Consensus         4 ~~~~~~kAav~~~~~~p--l~i~-ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~--~~~~p~i~GhE~   70 (199)
T d1cdoa1           4 GKVIKCKAAVAWEANKP--LVIE-EIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKH--KDGFPVVLGHEG   70 (199)
T ss_dssp             TSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCC--TTSCSEECCCCE
T ss_pred             CCceEEEEEEEecCCCC--cEEE-EEECCCCCCCEEEEEEEEEEEecchhhhhhhccc--cccccccccccc
Confidence            34567889999998877  8889 9999999999999999999999999999999764  457899999999

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.20  E-value=1e-11  Score=99.97  Aligned_cols=102  Identities=22%  Similarity=0.313  Sum_probs=79.0

Q ss_pred             cCceE-EEecChhhHHHHHhCCCCEEEeCCCCCccccC------CCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCC
Q 023571          146 PGYDV-AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP------EKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVT  216 (280)
Q Consensus       146 ~G~e~-~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~------~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~  216 (280)
                      .|.+. +++.+++++++++++|++++|+++++++.+.+      +|+|+||||+|  .++.++++|+++|++|.+|....
T Consensus        49 ~g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~  128 (183)
T d1pqwa_          49 IGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDV  128 (183)
T ss_dssp             HTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGG
T ss_pred             ccccceeeecccccccccccccccccccCCccCHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCC
Confidence            34444 56778899999999999999999999887643      68999999998  68999999999999999986542


Q ss_pred             CCce-----------EEEEe-----------ecHHHHHHHHHHHHCCCceeec
Q 023571          217 PPGF-----------RFVVT-----------SNGEVLKKLNPYLESGKVKPII  247 (280)
Q Consensus       217 ~~~~-----------~~~~~-----------~~~~~l~~l~~ll~~G~l~~~~  247 (280)
                      ....           .+...           ..++.++++.+++++|+|++.+
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         129 YADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             TTTCEEEGGGGTTTCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             CCCcccchHHHhCCcEEEEEEccceeccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence            2111           11111           1246789999999999999753

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.19  E-value=1.7e-11  Score=95.49  Aligned_cols=63  Identities=22%  Similarity=0.329  Sum_probs=58.4

Q ss_pred             eEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE
Q 023571           85 KAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV  150 (280)
Q Consensus        85 ka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~  150 (280)
                      +.+.++++|+++.|+++ +.+.|+|++|||+|||.|+|||++|++++.|.++  ...+|.++|||+
T Consensus         2 ~~i~~~~~G~pe~l~~~-e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~--~~~~p~~~G~e~   64 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGLYP--PPSLPSGLGTEA   64 (147)
T ss_dssp             EEEEBSSCCSGGGCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC--CSSSSBCCCSCE
T ss_pred             eEEEEcccCCCceeEEE-EecCCCCCCCEEEEEEEEecccceeeeeecCCCC--CCcceeeecccc
Confidence            45788999999999999 9999999999999999999999999999999986  467899999999

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.16  E-value=1.9e-11  Score=98.24  Aligned_cols=61  Identities=11%  Similarity=0.047  Sum_probs=53.5

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~  150 (280)
                      |||+++.++++   ++++ +.|.|+|++|||||||.++|||++|++.+.+..+  ...+|.++|||+
T Consensus         1 MKa~v~~~~~~---l~i~-e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~--~~~~P~i~GhE~   61 (177)
T d1jqba1           1 MKGFAMLGINK---LGWI-EKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGAL--GDRKNMILGHEA   61 (177)
T ss_dssp             CEEEEEEETTE---EEEE-ECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTT--CCCSSEECCCCE
T ss_pred             CeEEEEEeCCC---eEEE-EeeCCCCCCCEEEEEEEEEecCCCcccccccCCC--CCCCCccCccee
Confidence            89999998764   8999 9999999999999999999999999987754443  357899999999

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.16  E-value=2.1e-11  Score=96.65  Aligned_cols=68  Identities=21%  Similarity=0.228  Sum_probs=61.6

Q ss_pred             cceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceEE
Q 023571           82 SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVA  151 (280)
Q Consensus        82 ~~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~~  151 (280)
                      .+|||+++++.|+...++++ +++.|++++|||||||+|+|||++|++.+.|.++ .....|.++|+|++
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~-~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~-~~~~~~~~~g~e~~   69 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN-IVREYPLILGIDAA   69 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEE-EEESSSSCSSSEEEEECCEEECHHHHHHTSTTCT-TCSSCSEECCSEEE
T ss_pred             CcEEEEEEEecCCCeEEEEE-EcCCCCCCCCEEEEEEEEecccchhhheeeeccc-ccccceeeeeeecc
Confidence            46999999999988889999 9999999999999999999999999999999886 34567889999993

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.03  E-value=1.9e-10  Score=91.69  Aligned_cols=68  Identities=22%  Similarity=0.327  Sum_probs=54.9

Q ss_pred             cceeEEEEcccCCC-ccE--EEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCCCC--------CCCCCcccCceE
Q 023571           82 SEMKAWLYGEYGGV-DVL--KFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT--------DSPLPTVPGYDV  150 (280)
Q Consensus        82 ~~mka~~~~~~g~~-~~l--~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~~~--------~~~~P~i~G~e~  150 (280)
                      .+|||+++.++|+| +.+  +.. +.|.|+|++|||||||+++|||++|+++++|.++..        ....|.++|+|+
T Consensus         2 ~t~kA~v~~~~G~p~~~l~l~~~-~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~   80 (175)
T d1gu7a1           2 ITAQAVLYTQHGEPKDVLFTQSF-EIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (175)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEE-EECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             ceeEEEEEccCCCcccccEEEEE-ECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccc
Confidence            57999999999987 334  445 677888999999999999999999999999987531        124567788887

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=98.98  E-value=2.2e-10  Score=91.34  Aligned_cols=63  Identities=24%  Similarity=0.346  Sum_probs=55.5

Q ss_pred             eEEEEcccCCCccEEEeeeccCCCC-CCCcEEEEEEEEecChHHHHHHcCCCCC-CCCCCCcccCceE
Q 023571           85 KAWLYGEYGGVDVLKFDEKVTVPQV-KEDQVLIKVVAAALNPVDGKRRQGKFKA-TDSPLPTVPGYDV  150 (280)
Q Consensus        85 ka~~~~~~g~~~~l~l~~~~~~p~~-~~~eVlVkV~aagl~~~D~~~~~g~~~~-~~~~~P~i~G~e~  150 (280)
                      ||+++.++|.+  |+++ +++.|++ ++|||||||.++|||++|++.+.|.++. ....+|.++|||+
T Consensus         1 kA~~~~~~g~p--l~i~-~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~   65 (171)
T d1h2ba1           1 KAARLHEYNKP--LRIE-DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHEN   65 (171)
T ss_dssp             CEEEESSTTSC--CEEE-CCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCE
T ss_pred             CEEEEEeCCCC--CEEE-EeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceee
Confidence            78999999987  8888 9999986 7899999999999999999999998753 2346899999999

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=98.98  E-value=2.3e-10  Score=91.57  Aligned_cols=92  Identities=21%  Similarity=0.198  Sum_probs=71.3

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCceE
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGFR  221 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~~~  221 (280)
                      +++.+++|+++++++|++++||++++++.+.      .+|+|+||||+|   .++.++++++++|+++.+|.......+.
T Consensus        57 ~~d~~~~r~~~a~~lGa~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~  136 (174)
T d1jqba2          57 GVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALL  136 (174)
T ss_dssp             EECCCHHHHHHHHHHTCSEEECGGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEE
T ss_pred             cccchhhhHHHHHhhCccccccccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCc
Confidence            6677888999999999999999999887664      267999999998   3799999999999999999766432222


Q ss_pred             E--------------EE---eecHHHHHHHHHHHHCCC
Q 023571          222 F--------------VV---TSNGEVLKKLNPYLESGK  242 (280)
Q Consensus       222 ~--------------~~---~~~~~~l~~l~~ll~~G~  242 (280)
                      +              ..   ...+..++++.++++.|+
T Consensus       137 ~~~~~~~~~~~~~~i~g~~~~~~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         137 IPRVEWGCGMAHKTIKGGLCPGGRLRAERLRDMVVYNR  174 (174)
T ss_dssp             EETTTTGGGTBCCEEEEBCCCCHHHHHHHHHHHHHTTS
T ss_pred             CcHhHHHHHhCccEEEEecCCCCcccHHHHHHHHHcCC
Confidence            1              11   123456777888888875

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.97  E-value=3.1e-10  Score=90.04  Aligned_cols=99  Identities=19%  Similarity=0.264  Sum_probs=76.6

Q ss_pred             cCceE-EEecChhhHHHHHhCCCCEEEeCCCC-Cccc-cCCCccEEEeCCC-----CHHHHHhccccCCEEEEEcCCCCC
Q 023571          146 PGYDV-AATSSTRNLEFLKSLGADLAIDYTKD-NFED-LPEKFDVVYDAIG-----QCDRAVKAIKEGGTVVALTGAVTP  217 (280)
Q Consensus       146 ~G~e~-~~~~s~~~~~~l~~lga~~vid~~~~-~~~~-~~~g~DvV~d~~g-----~~~~~l~~l~~gG~vV~~g~~~~~  217 (280)
                      +|.++ +++.+++|+++++++|++++|++.++ ++.+ ..+++|+++||+|     .++.++++++++|+++.+|....+
T Consensus        50 ~G~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~  129 (168)
T d1piwa2          50 MGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQH  129 (168)
T ss_dssp             HTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSS
T ss_pred             ccccccccccchhHHHHhhccCCcEEeeccchHHHHHhhhcccceEEEEecCCccchHHHHHHHhhccceEEEecccccc
Confidence            46666 66778999999999999999998764 3443 3478999999977     267899999999999999977654


Q ss_pred             CceEE------------EEeecHHHHHHHHHHHHCCCce
Q 023571          218 PGFRF------------VVTSNGEVLKKLNPYLESGKVK  244 (280)
Q Consensus       218 ~~~~~------------~~~~~~~~l~~l~~ll~~G~l~  244 (280)
                      ..+++            +.....++++++++|+++|+||
T Consensus       130 ~~~~~~~~~~k~~~i~Gs~~g~~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         130 EMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             CCEEECGGGCBSCEEEECCCCCHHHHHHHHHHHHHTTCC
T ss_pred             ccccHHHHHhCCcEEEEEeeCCHHHHHHHHHHHHhCCCC
Confidence            43332            1223578888899999888875

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=98.97  E-value=2.1e-10  Score=91.69  Aligned_cols=65  Identities=18%  Similarity=0.212  Sum_probs=56.6

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCccccC-----CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP-----EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~-----~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      +++.+++|+++++++|++++||++++++.+.+     +++|+||||+|   .++.++++++++|+++.+|...
T Consensus        58 ~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~  130 (174)
T d1f8fa2          58 AVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQ  130 (174)
T ss_dssp             EEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCS
T ss_pred             eeccHHHHHHHHHHcCCeEEEeCCCcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecC
Confidence            45678999999999999999999998876642     58999999999   4789999999999999998654

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=98.96  E-value=2.6e-10  Score=90.55  Aligned_cols=67  Identities=19%  Similarity=0.120  Sum_probs=57.7

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTP  217 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~  217 (280)
                      ++..+++|+++++++|++++++++++++.+.      .+++|++|||+|   .++.++++++++|+++.+|.....
T Consensus        58 ~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~  133 (170)
T d1jvba2          58 GVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGAD  133 (170)
T ss_dssp             EEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCC
T ss_pred             ccccchhhHHHHHHcCCceeeccCCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCc
Confidence            5667889999999999999999998887554      367999999998   378999999999999999877644

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=98.95  E-value=4.8e-10  Score=89.22  Aligned_cols=65  Identities=20%  Similarity=0.294  Sum_probs=54.8

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc-----CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~-----~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      +++.+++|+++++++|++++++++++.+...     .+++|+||||+|   .++.++++++++|+++.+|...
T Consensus        62 ~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~  134 (172)
T d1h2ba2          62 ALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG  134 (172)
T ss_dssp             EEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS
T ss_pred             cccchhHHHHHHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc
Confidence            5667788999999999999999987655432     368999999998   4899999999999999998643

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=98.94  E-value=8.4e-10  Score=90.24  Aligned_cols=60  Identities=22%  Similarity=0.370  Sum_probs=52.9

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCC-------CCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQV-------KEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~-------~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~  150 (280)
                      +||+++..+++   ++++ +++.|++       ++|||+|||.++|||++|++++.|.++   ..+|.++|||+
T Consensus         2 ~kA~v~~~~~~---le~~-e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~---~~~P~v~GHE~   68 (201)
T d1kola1           2 NRGVVYLGSGK---VEVQ-KIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT---AQVGLVLGHEI   68 (201)
T ss_dssp             EEEEEEEETTE---EEEE-EECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC---CCTTCBCCCCE
T ss_pred             cEEEEEeCCCc---eEEE-EecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc---cccceecccee
Confidence            69999988763   8888 8888864       569999999999999999999999875   47899999999

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.94  E-value=5.5e-10  Score=89.49  Aligned_cols=62  Identities=19%  Similarity=0.196  Sum_probs=50.2

Q ss_pred             eeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCCC-CCCCCCCcccCceE
Q 023571           84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFK-ATDSPLPTVPGYDV  150 (280)
Q Consensus        84 mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~~-~~~~~~P~i~G~e~  150 (280)
                      |+|+ +..++   .++++ +.|.|+|++|||||||+++|||++|++.+.|... ......|.++|||+
T Consensus         3 maAV-l~g~~---~l~~~-e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~   65 (178)
T d1e3ja1           3 LSAV-LYKQN---DLRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEA   65 (178)
T ss_dssp             EEEE-EEETT---EEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEE
T ss_pred             eEEE-EEcCC---cEEEE-EeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeecccc
Confidence            5555 44443   48999 9999999999999999999999999998876542 23456789999999

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=5.6e-10  Score=90.06  Aligned_cols=64  Identities=14%  Similarity=0.153  Sum_probs=54.0

Q ss_pred             ceeEEEEcccCCCccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHHcCCC-CCCCCCCCcccCceE
Q 023571           83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF-KATDSPLPTVPGYDV  150 (280)
Q Consensus        83 ~mka~~~~~~g~~~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~~g~~-~~~~~~~P~i~G~e~  150 (280)
                      .|+|++++.++   .++++ +++.|+|++|||||||.++|||++|++++.+.. +.....+|.++|||+
T Consensus         7 ~~~a~V~~gp~---~l~l~-evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~   71 (185)
T d1pl8a1           7 NNLSLVVHGPG---DLRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEA   71 (185)
T ss_dssp             CCEEEEEEETT---EEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEE
T ss_pred             CCEEEEEeCCC---eEEEE-EeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeee
Confidence            47799998764   48999 999999999999999999999999999987543 212356789999999

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=5.3e-10  Score=88.85  Aligned_cols=69  Identities=23%  Similarity=0.325  Sum_probs=58.9

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc--------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCCc
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL--------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPG  219 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~--------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~~  219 (280)
                      +++.+++|+++++++|+++++++.++++.+.        ..++|+||||+|   .++.++++++++|+++.+|....+..
T Consensus        56 ~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~  135 (171)
T d1pl8a2          56 VTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTT  135 (171)
T ss_dssp             EEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCC
T ss_pred             eccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCc
Confidence            6678899999999999999999988876442        368999999999   48999999999999999998775443

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=98.90  E-value=1.1e-09  Score=86.80  Aligned_cols=70  Identities=24%  Similarity=0.312  Sum_probs=58.4

Q ss_pred             cCceE-EEecChhhHHHHHhCCCCEEEeCCCCCccc-cCCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCC
Q 023571          146 PGYDV-AATSSTRNLEFLKSLGADLAIDYTKDNFED-LPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       146 ~G~e~-~~~~s~~~~~~l~~lga~~vid~~~~~~~~-~~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      .|.+. +++.+++++++++++|+|+++|+.+++... ..+++|++|||+|   .++.++++++++|+++.+|...
T Consensus        53 ~Ga~~i~~~~~~~~~~~a~~lGad~~i~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~  127 (168)
T d1uufa2          53 MGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPA  127 (168)
T ss_dssp             TTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-
T ss_pred             ccccchhhccchhHHHHHhccCCcEEEECchhhHHHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCC
Confidence            34444 677888899999999999999999876544 3478999999998   5899999999999999998755

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=7.3e-10  Score=88.28  Aligned_cols=70  Identities=13%  Similarity=0.299  Sum_probs=60.0

Q ss_pred             cCceE-EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCC
Q 023571          146 PGYDV-AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       146 ~G~e~-~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      .|.++ +++.+++|+++++++|++++||++++++.+.      .+++|+||||+|  .++.++++|+++|++|.+|...
T Consensus        52 ~G~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~  130 (174)
T d1yb5a2          52 YGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRG  130 (174)
T ss_dssp             TTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCS
T ss_pred             cCcccccccccccccccccccCcccccccccccHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCC
Confidence            45666 5667888999999999999999999988764      368999999998  6899999999999999998644

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.86  E-value=1.8e-09  Score=86.58  Aligned_cols=69  Identities=25%  Similarity=0.472  Sum_probs=59.4

Q ss_pred             cCceE-EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCC
Q 023571          146 PGYDV-AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGA  214 (280)
Q Consensus       146 ~G~e~-~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~  214 (280)
                      .|.++ ++++++++.++++++|++++|+++++++.+.      .+|+|+||||+|  .++.++++|+++|+++.+|..
T Consensus        53 ~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~  130 (182)
T d1v3va2          53 KGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAI  130 (182)
T ss_dssp             TTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCG
T ss_pred             cCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecce
Confidence            45566 5667888999999999999999999887653      378999999999  689999999999999999853

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.86  E-value=1.9e-09  Score=85.96  Aligned_cols=70  Identities=20%  Similarity=0.410  Sum_probs=60.9

Q ss_pred             cCceE-EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCC
Q 023571          146 PGYDV-AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       146 ~G~e~-~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      .|.++ +++.+++|+++++++|++++|||+++++.+.      .+++|+|+|++|  .+..++.+++++|+++.++...
T Consensus        52 ~Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  130 (179)
T d1qora2          52 LGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSS  130 (179)
T ss_dssp             HTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTT
T ss_pred             hCCeEeecccchHHHHHHHhcCCeEEEECCCCCHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeeccccc
Confidence            34455 6679999999999999999999999998764      368999999998  6899999999999999988765

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.84  E-value=4.8e-09  Score=83.79  Aligned_cols=70  Identities=21%  Similarity=0.333  Sum_probs=55.5

Q ss_pred             cCceE-EEecChhhHHHHHhCCCCEEEeCCCCCccc----cCCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCC
Q 023571          146 PGYDV-AATSSTRNLEFLKSLGADLAIDYTKDNFED----LPEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       146 ~G~e~-~~~~s~~~~~~l~~lga~~vid~~~~~~~~----~~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      .|..+ +++++++|.++++++|++++|||++.....    ..+++|+|||++|  .+..++++|+++|+++.+|...
T Consensus        55 ~Ga~Viat~~s~~k~~~~~~lGa~~vi~~~~~~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~  131 (176)
T d1xa0a2          55 RGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTG  131 (176)
T ss_dssp             TTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCS
T ss_pred             cCCceEEecCchHHHHHHHhcccceeeecchhHHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeeccc
Confidence            34444 666789999999999999999987643221    1368999999998  7999999999999999999875

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=98.83  E-value=3.9e-09  Score=84.55  Aligned_cols=68  Identities=21%  Similarity=0.315  Sum_probs=57.3

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc---------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCCC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL---------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP  218 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~---------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~~  218 (280)
                      +++.+++|+++++++|++++||+++.++.+.         ..|+|+||||+|   .++.++++++++|+++.+|......
T Consensus        58 ~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~  137 (182)
T d1vj0a2          58 VIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQD  137 (182)
T ss_dssp             EEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCC
T ss_pred             ccccccccccccccccceEEEeccccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCC
Confidence            6778899999999999999999998875432         257999999998   3789999999999999998755333

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.80  E-value=5e-09  Score=82.48  Aligned_cols=73  Identities=23%  Similarity=0.283  Sum_probs=58.1

Q ss_pred             cCceE-EEecChhhHHHHHhCCCCEEEeCCCCCccccC----CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCC
Q 023571          146 PGYDV-AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP----EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTP  217 (280)
Q Consensus       146 ~G~e~-~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~----~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~  217 (280)
                      .|.++ +++.+++|+++++++|++.++++.++++.+..    .+.|.++++++   .++.++++++++|+++.+|....+
T Consensus        50 ~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~  129 (168)
T d1rjwa2          50 MGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEE  129 (168)
T ss_dssp             TTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSE
T ss_pred             CCCeEeccCCCHHHhhhhhhcCcceecccccchhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccCC
Confidence            35555 67778999999999999999999998876543    45556666655   589999999999999999876644


Q ss_pred             C
Q 023571          218 P  218 (280)
Q Consensus       218 ~  218 (280)
                      .
T Consensus       130 ~  130 (168)
T d1rjwa2         130 M  130 (168)
T ss_dssp             E
T ss_pred             C
Confidence            3

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.75  E-value=1e-08  Score=80.75  Aligned_cols=72  Identities=19%  Similarity=0.222  Sum_probs=58.2

Q ss_pred             cCceE-EEecChhhHHHHHhCCCCEEEeCCCCCccccC----CCccEEEeCCC---CHHHHHhccccCCEEEEEcCCCCC
Q 023571          146 PGYDV-AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP----EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTP  217 (280)
Q Consensus       146 ~G~e~-~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~----~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~~~  217 (280)
                      .|.++ +++.+++|+++++++|++++||+.++++.+..    .+.|.++++++   .++.++++|+++|+++.+|....+
T Consensus        50 ~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~  129 (166)
T d1llua2          50 MGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGD  129 (166)
T ss_dssp             TTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSE
T ss_pred             cCCccceecchhhHHHhhhccCccccccccchhHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCC
Confidence            35555 56778899999999999999999998876543    56777777766   589999999999999999876543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.74  E-value=7.1e-09  Score=81.91  Aligned_cols=73  Identities=22%  Similarity=0.242  Sum_probs=57.1

Q ss_pred             cCceE-EEecChhhHHHHHhCCCCEEEeCCCCC--ccc--------cCCCccEEEeCCC---CHHHHHhccccCCEEEEE
Q 023571          146 PGYDV-AATSSTRNLEFLKSLGADLAIDYTKDN--FED--------LPEKFDVVYDAIG---QCDRAVKAIKEGGTVVAL  211 (280)
Q Consensus       146 ~G~e~-~~~~s~~~~~~l~~lga~~vid~~~~~--~~~--------~~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~  211 (280)
                      .|..+ +++.+++|+++++++|++.+++++...  ..+        ..+++|+||||+|   .++.++++++++|+++.+
T Consensus        49 ~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~  128 (170)
T d1e3ja2          49 YGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLV  128 (170)
T ss_dssp             TTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEEC
T ss_pred             hcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEE
Confidence            34444 677889999999999999988765432  211        1368999999999   479999999999999999


Q ss_pred             cCCCCCC
Q 023571          212 TGAVTPP  218 (280)
Q Consensus       212 g~~~~~~  218 (280)
                      |....+.
T Consensus       129 G~~~~~~  135 (170)
T d1e3ja2         129 GMGSQMV  135 (170)
T ss_dssp             SCCSSCC
T ss_pred             ecCCCCC
Confidence            9776543

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.70  E-value=7.6e-09  Score=83.29  Aligned_cols=70  Identities=20%  Similarity=0.366  Sum_probs=53.4

Q ss_pred             cCceE--EEecChhhHHHH-HhCCCCEEEeCCCCCccccC-----CCccEEEeCCC--CHHHHHhccccCCEEEEEcCCC
Q 023571          146 PGYDV--AATSSTRNLEFL-KSLGADLAIDYTKDNFEDLP-----EKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       146 ~G~e~--~~~~s~~~~~~l-~~lga~~vid~~~~~~~~~~-----~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      .|.+.  +++.++++...+ +++|+|++|||+++++.+.+     +|+|+||||+|  .++.++++|+++|+++.+|...
T Consensus        54 ~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~~~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s  133 (187)
T d1vj1a2          54 LGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQIS  133 (187)
T ss_dssp             TTCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSCHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC----
T ss_pred             cCCcceecccchHHHHhhhhhcccceEEeeccchhHHHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEecccc
Confidence            45443  345566666555 57999999999999887643     68999999999  6899999999999999998644

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=98.64  E-value=3e-08  Score=78.90  Aligned_cols=67  Identities=19%  Similarity=0.187  Sum_probs=54.8

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCC-ccc------cCCCccEEEeCCC---CHHHHHhccccC-CEEEEEcCCCCC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDN-FED------LPEKFDVVYDAIG---QCDRAVKAIKEG-GTVVALTGAVTP  217 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~-~~~------~~~g~DvV~d~~g---~~~~~l~~l~~g-G~vV~~g~~~~~  217 (280)
                      +++.+++|+++++++|++++++++..+ ...      ..+|+|+||||+|   .++.++++++++ |+++.+|.....
T Consensus        58 ~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~  135 (174)
T d1e3ia2          58 AIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE  135 (174)
T ss_dssp             EECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSE
T ss_pred             eeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCc
Confidence            567789999999999999999976543 221      1379999999999   489999999996 999999876543

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=98.62  E-value=2.6e-08  Score=79.22  Aligned_cols=70  Identities=14%  Similarity=0.115  Sum_probs=54.4

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCC-c-ccc-----CCCccEEEeCCC---CHHHHHhcccc-CCEEEEEcCCCCCCc
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDN-F-EDL-----PEKFDVVYDAIG---QCDRAVKAIKE-GGTVVALTGAVTPPG  219 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~-~-~~~-----~~g~DvV~d~~g---~~~~~l~~l~~-gG~vV~~g~~~~~~~  219 (280)
                      +++.+++|+++++++|++++||+++.+ + .+.     .+|+|++|||+|   .++.++.++++ +|+++.+|.......
T Consensus        57 ~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~  136 (174)
T d1p0fa2          57 GVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNER  136 (174)
T ss_dssp             EECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCC
T ss_pred             ccCChHHHHHHHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccc
Confidence            556788999999999999999987755 2 221     368999999999   46788888876 599999987654433


Q ss_pred             e
Q 023571          220 F  220 (280)
Q Consensus       220 ~  220 (280)
                      +
T Consensus       137 ~  137 (174)
T d1p0fa2         137 L  137 (174)
T ss_dssp             E
T ss_pred             c
Confidence            3

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=98.59  E-value=4.7e-08  Score=77.38  Aligned_cols=65  Identities=18%  Similarity=0.175  Sum_probs=50.7

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCc-ccc------CCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNF-EDL------PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~-~~~------~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      +++.+++|+++++++|+|++||+.+++. .+.      .+|+|++||++|   .+..++.+++++|.++.+++..
T Consensus        58 ~~~~~~~rl~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~  132 (175)
T d1cdoa2          58 AVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWT  132 (175)
T ss_dssp             EECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred             eecchHHHHHHHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEec
Confidence            5667788999999999999999987653 222      368999999999   3688899988876665555444

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=98.57  E-value=7e-09  Score=82.90  Aligned_cols=94  Identities=19%  Similarity=0.249  Sum_probs=72.9

Q ss_pred             CCCcEEEEEEEEecChHHHHHHcCCCCCCCCCCCcccCceE-EEecChhhHHHHHhCCCCEEEeCCCCCccccC--CCcc
Q 023571          110 KEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV-AATSSTRNLEFLKSLGADLAIDYTKDNFEDLP--EKFD  186 (280)
Q Consensus       110 ~~~eVlVkV~aagl~~~D~~~~~g~~~~~~~~~P~i~G~e~-~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~--~g~D  186 (280)
                      +.+.|+|.--+.|+...=+++.+            .+|.++ +++++++|.++++++|+|++|||++.++...+  ...|
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk------------~~Ga~Via~~~~~~k~~~~~~lGad~vi~~~~~~~~~~l~~~~~~   98 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLH------------KLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWA   98 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHH------------HTTCCEEEEESCGGGHHHHHHHTEEEEEEGGGSSSCCSSCCCCEE
T ss_pred             CCCcEEEEEccccchHHHHHHHH------------HcCCCeEEEecchhHHHHHHhhccccccccccHHHHHHHHhhcCC
Confidence            44566665444455554444443            356666 57888999999999999999999988777654  4589


Q ss_pred             EEEeCCC--CHHHHHhccccCCEEEEEcCCC
Q 023571          187 VVYDAIG--QCDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       187 vV~d~~g--~~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      .++|++|  .+..++++++++|++|.+|...
T Consensus        99 ~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~  129 (177)
T d1o89a2          99 GAIDTVGDKVLAKVLAQMNYGGCVAACGLAG  129 (177)
T ss_dssp             EEEESSCHHHHHHHHHTEEEEEEEEECCCTT
T ss_pred             eeEEEcchHHHHHHHHHhccccceEeecccC
Confidence            9999999  6899999999999999998765

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=98.56  E-value=4.2e-08  Score=79.45  Aligned_cols=65  Identities=15%  Similarity=0.158  Sum_probs=56.8

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcccc------CCCccEEEeCCC------------------CHHHHHhccccCC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG------------------QCDRAVKAIKEGG  206 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~~~------~~g~DvV~d~~g------------------~~~~~l~~l~~gG  206 (280)
                      +++.+++|+++++++|+++++++.++++.+.      ..|+|++|||+|                  .++.++++++++|
T Consensus        55 ~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG  134 (195)
T d1kola2          55 VGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAG  134 (195)
T ss_dssp             EEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEE
T ss_pred             eecccchhhHhhhhccccEEEeCCCcCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCC
Confidence            6678889999999999999999999887653      368999999987                  2789999999999


Q ss_pred             EEEEEcCCC
Q 023571          207 TVVALTGAV  215 (280)
Q Consensus       207 ~vV~~g~~~  215 (280)
                      +++.+|.+.
T Consensus       135 ~v~~~G~~~  143 (195)
T d1kola2         135 KIGIPGLYV  143 (195)
T ss_dssp             EEEECSCCC
T ss_pred             EEEEeeecC
Confidence            999999755

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=98.52  E-value=9.9e-08  Score=75.39  Aligned_cols=65  Identities=18%  Similarity=0.206  Sum_probs=52.0

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCC-Cccc------cCCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKD-NFED------LPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~-~~~~------~~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      +++.+++|+++++++|++++||+.+. ++..      ..+|+|+|||++|   .++.++.++++||+++.++...
T Consensus        58 ~~~~~~~k~~~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~  132 (176)
T d2fzwa2          58 GVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVA  132 (176)
T ss_dssp             EECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred             EEcccHHHHHHHHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeec
Confidence            55677889999999999999999763 3222      1368999999999   3688999999999888876554

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.51  E-value=3e-08  Score=79.78  Aligned_cols=70  Identities=14%  Similarity=0.281  Sum_probs=53.0

Q ss_pred             cCceE-EEecC----hhhHHHHHhCCCCEEEeCCCCCccc-----------cCCCccEEEeCCC--CHHHHHhccccCCE
Q 023571          146 PGYDV-AATSS----TRNLEFLKSLGADLAIDYTKDNFED-----------LPEKFDVVYDAIG--QCDRAVKAIKEGGT  207 (280)
Q Consensus       146 ~G~e~-~~~~s----~~~~~~l~~lga~~vid~~~~~~~~-----------~~~g~DvV~d~~g--~~~~~l~~l~~gG~  207 (280)
                      .|..+ +++++    ++++++++++|++++|++++.+..+           ..+++|+||||+|  .+..++++|+++|+
T Consensus        53 ~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~  132 (189)
T d1gu7a2          53 LNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGL  132 (189)
T ss_dssp             HTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCE
T ss_pred             cCCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcE
Confidence            45555 34433    3456778899999999987654322           1367999999998  68899999999999


Q ss_pred             EEEEcCCC
Q 023571          208 VVALTGAV  215 (280)
Q Consensus       208 vV~~g~~~  215 (280)
                      +|.+|...
T Consensus       133 ~v~~G~~~  140 (189)
T d1gu7a2         133 MLTYGGMS  140 (189)
T ss_dssp             EEECCCCS
T ss_pred             EEEECCcc
Confidence            99998654

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.51  E-value=2.1e-08  Score=79.48  Aligned_cols=69  Identities=26%  Similarity=0.370  Sum_probs=54.3

Q ss_pred             CceE-EEecChhhHHHHHhCCCCEEEeCCCCC-ccccCCCccEEEeCCC-CHHHHHhccccCCEEEEEcCCC
Q 023571          147 GYDV-AATSSTRNLEFLKSLGADLAIDYTKDN-FEDLPEKFDVVYDAIG-QCDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       147 G~e~-~~~~s~~~~~~l~~lga~~vid~~~~~-~~~~~~g~DvV~d~~g-~~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      |.++ +++.++++.++++++|+++++||.+.. .....+|+|+||||+| .++.++++|+++|+++.+|...
T Consensus        52 G~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~G~~~~~~~~~l~~~G~~v~~G~~~  123 (171)
T d1iz0a2          52 GLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIGAAE  123 (171)
T ss_dssp             TCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEECSCTTHHHHHTTEEEEEEEEEC----
T ss_pred             ccccccccccccccccccccccceeeehhhhhhhhhccccccccccccchhHHHHHHHHhcCCcEEEEeCCC
Confidence            4444 566788999999999999999987532 2223579999999999 8999999999999999998654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=98.48  E-value=2.2e-08  Score=79.16  Aligned_cols=71  Identities=28%  Similarity=0.374  Sum_probs=58.2

Q ss_pred             cCceE-EEecChhhHHHHHhCCCCEEEeCCCCCcccc----CCCccEEEeCCC--CHHHHHhccccCCEEEEEcCCCC
Q 023571          146 PGYDV-AATSSTRNLEFLKSLGADLAIDYTKDNFEDL----PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVT  216 (280)
Q Consensus       146 ~G~e~-~~~~s~~~~~~l~~lga~~vid~~~~~~~~~----~~g~DvV~d~~g--~~~~~l~~l~~gG~vV~~g~~~~  216 (280)
                      +|..+ +++++++|.++++++|++++++|++..+...    .+++|+|||++|  .+..++++|+++|++|.+|....
T Consensus        47 ~Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~~~~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g  124 (167)
T d1tt7a2          47 RGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGG  124 (167)
T ss_dssp             HTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSC
T ss_pred             cCCceEEEecCHHHHHHHHhhcccceEeccchhchhhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCC
Confidence            45555 6677789999999999999999875332221    368999999998  68999999999999999998764

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=98.32  E-value=7.7e-07  Score=70.25  Aligned_cols=65  Identities=15%  Similarity=0.170  Sum_probs=50.1

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCC-ccc------cCCCccEEEeCCC---CHHHHHhccccCCEEEEEcCCC
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDN-FED------LPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAV  215 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~-~~~------~~~g~DvV~d~~g---~~~~~l~~l~~gG~vV~~g~~~  215 (280)
                      +++.+++|+++++++|+++++++.+.+ +.+      ..+|+|++|||+|   .++.++.+++++|+.+.+++..
T Consensus        58 ~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~  132 (176)
T d2jhfa2          58 GVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVP  132 (176)
T ss_dssp             EECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCC
T ss_pred             eecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCC
Confidence            667789999999999999999986643 222      1368999999999   3688999999986555555544

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=98.17  E-value=1.1e-06  Score=69.55  Aligned_cols=69  Identities=14%  Similarity=0.135  Sum_probs=54.7

Q ss_pred             EEecChhhHHHHHhCCCCEEEeCCCCCcc-c------cCCCccEEEeCCC---CHHHHHhccccC-CEEEEEcCCCCCCc
Q 023571          151 AATSSTRNLEFLKSLGADLAIDYTKDNFE-D------LPEKFDVVYDAIG---QCDRAVKAIKEG-GTVVALTGAVTPPG  219 (280)
Q Consensus       151 ~~~~s~~~~~~l~~lga~~vid~~~~~~~-~------~~~g~DvV~d~~g---~~~~~l~~l~~g-G~vV~~g~~~~~~~  219 (280)
                      +++.+++|+++++++|++++||+++.++. +      ..+|+|+++|++|   .+..++..+.++ |++|.+|.......
T Consensus        59 ~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~  138 (176)
T d1d1ta2          59 GIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKM  138 (176)
T ss_dssp             EECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCC
T ss_pred             EecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccc
Confidence            67778999999999999999999876542 2      1378999999999   367777777655 99999997764443

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.20  E-value=0.00043  Score=52.54  Aligned_cols=48  Identities=19%  Similarity=0.400  Sum_probs=39.8

Q ss_pred             ceeEEEEccc--CCC--ccEEEeeeccCCCCCCCcEEEEEEEEecChHHHHHH
Q 023571           83 EMKAWLYGEY--GGV--DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRR  131 (280)
Q Consensus        83 ~mka~~~~~~--g~~--~~l~l~~~~~~p~~~~~eVlVkV~aagl~~~D~~~~  131 (280)
                      +.|+|++.+.  |.|  +.|+++ +.++|+|++||||||++|.++++.....+
T Consensus         3 ~~k~~vl~~~P~G~P~~~~f~l~-e~~ip~~~~gevLvk~~~~svDp~~R~~~   54 (147)
T d1v3va1           3 KAKSWTLKKHFQGKPTQSDFELK-TVELPPLKNGEVLLEALFLSVDPYMRIAS   54 (147)
T ss_dssp             EEEEEEESSCCCSSCCGGGEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHHG
T ss_pred             ccEEEEEccCCCCCCcccceEEE-EEECCCCCCCEEEEEEEEEeEcccccccc
Confidence            4588888774  544  669999 99999999999999999999999765443

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=81.40  E-value=0.91  Score=35.19  Aligned_cols=65  Identities=15%  Similarity=0.261  Sum_probs=46.2

Q ss_pred             CceE-EEecChhhHHHHHhCCCCEEEeCCCCCccccCCCccEEEeCCC----------CHHHHHhccccCCEEEEE
Q 023571          147 GYDV-AATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG----------QCDRAVKAIKEGGTVVAL  211 (280)
Q Consensus       147 G~e~-~~~~s~~~~~~l~~lga~~vid~~~~~~~~~~~g~DvV~d~~g----------~~~~~l~~l~~gG~vV~~  211 (280)
                      |+++ +++.++...+.+++-+....+....+++.-..+.+|+|+-...          .+..+.++|++||.++..
T Consensus        64 ~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~l~~~~~~fD~ii~~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1          64 GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ceEEEEeecccccccccccccccccccccccccccccccccceeeecchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            4455 7788888899998877666666555444322368999986543          157788899999998864

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=80.32  E-value=1.2  Score=35.90  Aligned_cols=80  Identities=13%  Similarity=0.141  Sum_probs=50.3

Q ss_pred             EEecChhhHHHHHh----CCCCEEEeCCCCCcccc--CCCccEEEeCCC----CHHHHHhccccCCEEEEEcCCCCCCce
Q 023571          151 AATSSTRNLEFLKS----LGADLAIDYTKDNFEDL--PEKFDVVYDAIG----QCDRAVKAIKEGGTVVALTGAVTPPGF  220 (280)
Q Consensus       151 ~~~~s~~~~~~l~~----lga~~vid~~~~~~~~~--~~g~DvV~d~~g----~~~~~l~~l~~gG~vV~~g~~~~~~~~  220 (280)
                      ..+.+++..+.+++    +|....+.....+....  ...+|.||--..    .++.+.++|+|||+++.+..       
T Consensus       133 ~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~~~~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~P-------  205 (266)
T d1o54a_         133 AYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP-------  205 (266)
T ss_dssp             EECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES-------
T ss_pred             EEeCCHHHHHHHHHHHHHhccccCcEEEeccccccccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEeC-------
Confidence            66677777766654    55422222112222221  256888776655    58999999999999997643       


Q ss_pred             EEEEeecHHHHHHHHHHHHCCCc
Q 023571          221 RFVVTSNGEVLKKLNPYLESGKV  243 (280)
Q Consensus       221 ~~~~~~~~~~l~~l~~ll~~G~l  243 (280)
                            .-+.++++.+.+++..+
T Consensus       206 ------~~~Qv~~~~~~l~~~gF  222 (266)
T d1o54a_         206 ------TTNQVQETLKKLQELPF  222 (266)
T ss_dssp             ------SHHHHHHHHHHHHHSSE
T ss_pred             ------cccHHHHHHHHHHHCCc
Confidence                  34667777777776544