Citrus Sinensis ID: 023587

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Protein Sequence
MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVSPQVKQILEY
Secondary Structure (PSIPRED)
ccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccEEEEEEHHccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHccc
Secondary Structure Prediction (SSPRO)
cEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHccccccEcccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mvlvneqrklsaslpLICRCIISCILVLLTQLTlslvprffaasPFIVQFALSGLVLLLVQTLCGWCRRLlgvcasapafvFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSimskdpglitnefphldklvegselgvdpdnenslsrKRVRYCKICKAhvegfdhhcpafgncigqnnYFLFIVLLVGFLATEASYVACSAqfvgksqnfdksqsenDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFnvrtdewvspqVKQILEY
Flexible Loop (DISEMBL)
MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVegselgvdpdnenslsrkRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVSPQVKQILEY
Low Complexity Region (SEG)
MVLVNEQRKLSASLPLICRCIISCIlvlltqltlslvPRFFAASPFIVQFALSGlvlllvQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVSPQVKQILEY
Disordered region (IsUnstruct)
***********ASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVE****************KRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNF*****ENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVSPQV******
Disordered Region (DISOPRED)
**************PLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFP********SELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVSPQ*******
Disordered Region (DISEMBL)
********KLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVSPQVKQILEY
Disordered Region (DISPRO)
*******RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVSPQVKQILEY
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVSPQVKQILEY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	280	2.2.26 [Sep-21-2011]
Q9NYG2	327	Palmitoyltransferase ZDHH	no	no	0.385	0.330	0.307	5e-08
Q8R173	299	Palmitoyltransferase ZDHH	yes	no	0.607	0.568	0.257	6e-08
Q9NUE0	388	Palmitoyltransferase ZDHH	no	no	0.375	0.270	0.330	6e-07
Q550R7	434	Putative ZDHHC-type palmi	yes	no	0.15	0.096	0.545	1e-06
Q5Y5T2	380	Palmitoyltransferase ZDHH	no	no	0.375	0.276	0.321	2e-06
Q2TGJ1	386	Palmitoyltransferase ZDHH	no	no	0.375	0.272	0.321	2e-06
Q9M115	508	Probable S-acyltransferas	yes	no	0.196	0.108	0.328	6e-06
Q9UVH3	559	Palmitoyltransferase AKR1	N/A	no	0.389	0.194	0.291	6e-06
Q58DA8	363	Palmitoyltransferase ZDHH	no	no	0.357	0.275	0.341	1e-05
Q91WU6	308	Palmitoyltransferase ZDHH	no	no	0.557	0.506	0.260	1e-05

>sp|Q9NYG2|ZDHC3_HUMAN Palmitoyltransferase ZDHHC3 OS=Homo sapiens GN=ZDHHC3 PE=1 SV=1

 Score = 58.5 bits (140), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 9/117 (7%)

Query: 97  RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI-----TNEFPHLDKLVEGSELGVDP 150
           R  V S+I G+ FN+   + +   C  M  DPG +     T EF    +L  G  +   P
Sbjct: 71  RDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYKCP 130

Query: 151 DNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNN--YFLFIVLLVGFLATEA 205
               S+   R  +C +CK  +   DHHCP   NC+G+NN  YF+   + +  ++  A
Sbjct: 131 KC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHA 186

Palmitoyltransferase with broad specificity. Palmitoylates GABA receptors on their gamma subunit (GABRG1, GABRG2 and GABRG3), which regulates synaptic clustering and/or cell surface stability. Palmitoylates glutamate receptors GRIA1 and GRIA2, which leads to their retention in Golgi.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|Q8R173|ZDHC3_MOUSE Palmitoyltransferase ZDHHC3 OS=Mus musculus GN=Zdhhc3 PE=1 SV=1

 Score = 58.2 bits (139), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 24/194 (12%)

Query: 97  RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI-----TNEFPHLDKLVEGSELGVDP 150
           R    S+I G+ FN+   + +   C  M  DPG +     T EF    +L  G  +   P
Sbjct: 71  RDYAYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYKCP 130

Query: 151 DNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNN--YFLFIVLLVGFLATEA--- 205
               S+   R  +C +CK  +   DHHCP   NC+G+NN  YF+   + +  ++  A   
Sbjct: 131 KC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHALIM 189

Query: 206 ---SYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCF 262
               ++ C  +   K  +F    +     V L       ++L L++ +V F   ++ +C 
Sbjct: 190 VGFHFLHCFEEDWTKCSSFSPPTT-----VILLILLCFEALLFLIFTSVMFGTQVHSIC- 243

Query: 263 NVRTDEWVSPQVKQ 276
              TDE    Q+K+
Sbjct: 244 ---TDETGIEQLKK 254

Palmitoyltransferase with broad specificity. Palmitoylates GABA receptors on their gamma subunit (GABRG1, GABRG2 and GABRG3), which regulates synaptic clustering and/or cell surface stability. Palmitoylates glutamate receptors GRIA1 and GRIA2, which leads to their retention in Golgi.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NUE0|ZDH18_HUMAN Palmitoyltransferase ZDHHC18 OS=Homo sapiens GN=ZDHHC18 PE=2 SV=2

 Score = 55.1 bits (131), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 7/112 (6%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFV---G 216
           R  +C +C   VE FDHHCP  GNC+G+ NY  F   ++      A   AC    +    
Sbjct: 204 RTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFYAFILSLSFLTAFIFACVVTHLTLRA 263

Query: 217 KSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE 268
           +  NF  +  E    V L      FSI  +L  + F   H Y V  N+ T+E
Sbjct: 264 QGSNFLSTLKETPASV-LELVICFFSIWSILGLSGF---HTYLVASNLTTNE 311

Has palmitoyltransferase activity towards HRAS and LCK.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q550R7|ZDHC1_DICDI Putative ZDHHC-type palmitoyltransferase 1 OS=Dictyostelium discoideum GN=DDB_G0276997 PE=3 SV=3

 Score = 53.5 bits (127), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 2/44 (4%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNY--FLFIVLLVGFL 201
           R  +C IC   VE FDHHCP  GNCIG+ NY  FL+ +  +GFL
Sbjct: 127 RANHCGICNNCVERFDHHCPWVGNCIGRRNYQTFLYFLYSLGFL 170

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5Y5T2|ZDH18_MOUSE Palmitoyltransferase ZDHHC18 OS=Mus musculus GN=Zdhhc18 PE=1 SV=4

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 7/112 (6%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVAC---SAQFVG 216
           R  +C +C   VE FDHHCP  GNC+G+ NY  F   ++      A   AC       + 
Sbjct: 196 RTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFYAFILSLSFLTAFIFACVVTHLTLLS 255

Query: 217 KSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE 268
           +  NF  +  +    V L      FSI  +L  + F   H Y V  N+ T+E
Sbjct: 256 QGSNFLSALKKTPASV-LELVICFFSIWSILGLSGF---HTYLVASNLTTNE 303

Has palmitoyltransferase activity towards HRAS and LCK.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q2TGJ1|ZDH18_RAT Palmitoyltransferase ZDHHC18 OS=Rattus norvegicus GN=Zdhhc18 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVAC---SAQFVG 216
           R  +C +C   VE FDHHCP  GNC+G+ NY  F   ++      A   AC       + 
Sbjct: 202 RTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFYAFILSLSFLTAFIFACVVTHLTLLS 261

Query: 217 KSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE 268
           +  NF  + ++    V L      FSI  +L  + F   H Y V  N+ T+E
Sbjct: 262 QGSNFLSALNKTPAGV-LELVICFFSIWSILGLSGF---HTYLVASNLTTNE 309

Has palmitoyltransferase activity towards HRAS and LCK.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9M115|ZDH16_ARATH Probable S-acyltransferase At4g01730 OS=Arabidopsis thaliana GN=At4g01730 PE=2 SV=2

 Score = 51.6 bits (122), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 9/64 (14%)

Query: 140 LVEGSELGVDPDNENSLS---------RKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNY 190
           + +   +  DP  E+ +S         ++  ++C+ C   VEGFDHHC    NC+G+ NY
Sbjct: 141 MKDDDSVTPDPKEEDDISYCSLCDLEVKRSSKHCRTCNRCVEGFDHHCRWLNNCVGKKNY 200

Query: 191 FLFI 194
             FI
Sbjct: 201 TTFI 204

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9UVH3|AKR1_MORAP Palmitoyltransferase AKR1 (Fragment) OS=Mortierella alpina PE=3 SV=1

 Score = 51.6 bits (122), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 11/120 (9%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGK-S 218
           R ++CK C   V  FDHHCP   NCIG  N+  F++ L  FL++   Y   S +++   S
Sbjct: 284 RSKHCKFCNRCVAKFDHHCPWIYNCIGAKNHRAFLIFLALFLSSVPIYAYLSFEYLHVLS 343

Query: 219 QNFDKSQSE---------NDWVVNLATSTMLF-SILQLLWQAVFFMWHIYCVCFNVRTDE 268
            ++    S+           +  +  T+T+ F S+ Q+ W  + F+  +Y V     T+E
Sbjct: 344 PSYVPVSSDPCLLGDTLCGYFQYDAFTTTLAFWSLFQMTWPGLLFLVQLYQVGQAKTTNE 403

Palmitoyltransferase specific for casein kinase 1.

Mortierella alpina (taxid: 64518)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q58DA8|ZDHC9_BOVIN Palmitoyltransferase ZDHHC9 OS=Bos taurus GN=ZDHHC9 PE=2 SV=1

 Score = 50.8 bits (120), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 54/117 (46%), Gaps = 17/117 (14%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNY---FLFI----VLLVGFLATEASYVACSA 212
           R  +C IC   VE FDHHCP  GNC+G+ NY   +LFI    +L +   A    YVA  +
Sbjct: 151 RASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYVALKS 210

Query: 213 QFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFM-WHIYCVCFNVRTDE 268
             +G    F ++  E    V L      F+    LW  V    +H + V  N  T+E
Sbjct: 211 LKIG----FLETLKETPGTV-LEVLICFFT----LWSVVGLTGFHTFLVALNQTTNE 258

The ZDHHC9-GOLGA7 complex is a palmitoyltransferase specific for HRAS and NRAS.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q91WU6|ZDHC7_MOUSE Palmitoyltransferase ZDHHC7 OS=Mus musculus GN=Zdhhc7 PE=1 SV=1

 Score = 50.8 bits (120), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 9/165 (5%)

Query: 105 GGLFNIEVAMIIIGLCSIMSKDPGLI-----TNEFPHLDKLVEGSELGVDPDNENSLSRK 159
           G LFN    + +      M  DPG +     T E+    +L  G  +   P     +  +
Sbjct: 83  GVLFNCLAVLALSSHLRTMLTDPGAVPKGNATKEYMESLQLKPGEVIYKCPKC-CCIKPE 141

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGF-LATEASYVACSAQFVG-- 216
           R  +C ICK  +   DHHCP   NC+G+ N   F++  +   L++  + + C  QF+   
Sbjct: 142 RAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFTMYIALSSVHALILCGLQFISCV 201

Query: 217 KSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVC 261
           + Q  + S       V L     L  +L   + AV F   I+ +C
Sbjct: 202 RGQWTECSDFSPPITVILLVFLCLEGLLFFTFTAVMFGTQIHSIC 246

Palmitoyltransferase with broad specificity. Palmitoylates SNAP25 and DLG4/PSD95. May palmitoylate GABA receptors on their gamma subunit (GABRG1, GABRG2 and GABRG3) and regulate their synaptic clustering and/or cell surface stability.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
297746095	311	unnamed protein product [Vitis vinifera]	0.967	0.871	0.557	2e-78
255585828	291	zinc finger protein, putative [Ricinus c	0.832	0.800	0.522	4e-70
225434978	311	PREDICTED: probable S-acyltransferase At	0.885	0.797	0.515	3e-64
218192534	328	hypothetical protein OsI_10951 [Oryza sa	0.896	0.765	0.466	2e-62
115452213	299	Os03g0275400 [Oryza sativa Japonica Grou	0.885	0.829	0.471	9e-62
222624656	370	hypothetical protein OsJ_10323 [Oryza sa	0.896	0.678	0.462	1e-61
357112878	313	PREDICTED: palmitoyltransferase ZDHHC17-	0.939	0.840	0.441	5e-61
414866099	299	TPA: hypothetical protein ZEAMMB73_41357	0.939	0.879	0.429	2e-58
226495287	315	DHHC zinc finger domain containing prote	0.942	0.838	0.424	3e-58
195619870	315	DHHC zinc finger domain containing prote	0.942	0.838	0.420	8e-58

>gi|297746095|emb|CBI16151.3| unnamed protein product [Vitis vinifera]

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 151/271 (55%), Positives = 193/271 (71%)

Query: 1   MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLV 60
           M+++++Q+ +  SL LI RC+ISCI V LTQ  LS+VPRFFAAS  ++Q  LS L+LL++
Sbjct: 1   MLVLDDQKSMRISLKLIGRCMISCIFVFLTQFALSIVPRFFAASSLLIQLPLSALLLLVL 60

Query: 61  QTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLC 120
                 CRR LGV ASAPAFVFFN+LFIWG YI ++R+ +S L+G + N E+ M+IIGL 
Sbjct: 61  LGAGRCCRRFLGVYASAPAFVFFNLLFIWGVYIVILRKVISPLMGIVLNGEIVMLIIGLY 120

Query: 121 SIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPA 180
           SI+S DPG +T+     D   E S    +   E S S +RVRYCK CKA+V+GFDHHCPA
Sbjct: 121 SILSSDPGFVTSRSSCSDNHAEDSFSEDEAHFEGSFSSRRVRYCKSCKAYVKGFDHHCPA 180

Query: 181 FGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTML 240
           FGNCIGQ N+ LF+VLLVGF+ TEASY+  S +F  K Q  D++  E     NL  STML
Sbjct: 181 FGNCIGQKNHVLFMVLLVGFVITEASYIMDSFKFATKFQKMDETGQETSLSENLVISTML 240

Query: 241 FSILQLLWQAVFFMWHIYCVCFNVRTDEWVS 271
           F +LQ+LWQ VF  WHIYCVC N+RTDEW++
Sbjct: 241 FCLLQVLWQGVFLTWHIYCVCVNIRTDEWIN 271

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585828|ref|XP_002533592.1| zinc finger protein, putative [Ricinus communis] gi|223526536|gb|EEF28797.1| zinc finger protein, putative [Ricinus communis]

 Score =  270 bits (691), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 140/268 (52%), Positives = 176/268 (65%), Gaps = 35/268 (13%)

Query: 4   VNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTL 63
           + ++R+  A LP   RC +S ILVLLTQ +LSL+PRFF+AS F++Q  LSG+V+L V   
Sbjct: 1   MQQERRKEALLPKFGRCTVSSILVLLTQFSLSLIPRFFSASSFLLQLTLSGIVVLFVLGF 60

Query: 64  CGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIM 123
             WCRRLLGV ASAPAFVF N+LFIW  Y  VVR AV   +  +F+ EV M+ IG     
Sbjct: 61  GRWCRRLLGVHASAPAFVFLNLLFIWSVYFCVVRPAVPFFMDAIFSGEVVMLFIG----- 115

Query: 124 SKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGN 183
             DP L+                            KRVRYCK CKA+V+GFDHHCPAFGN
Sbjct: 116 --DPLLL----------------------------KRVRYCKSCKAYVKGFDHHCPAFGN 145

Query: 184 CIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSI 243
           CIGQ+N+ LF+VLL+GFL+TEASY+ CS QFV  SQ    ++ E      L T TMLF++
Sbjct: 146 CIGQSNHALFMVLLLGFLSTEASYIMCSLQFVRGSQIEPVTRFELGLRGTLVTGTMLFTL 205

Query: 244 LQLLWQAVFFMWHIYCVCFNVRTDEWVS 271
           LQ+LWQ +F  WHIYC+CFN+RTDEW++
Sbjct: 206 LQVLWQGIFMAWHIYCICFNIRTDEWIN 233

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434978|ref|XP_002281137.1| PREDICTED: probable S-acyltransferase At2g14255-like [Vitis vinifera]

 Score =  251 bits (641), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 137/266 (51%), Positives = 178/266 (66%), Gaps = 18/266 (6%)

Query: 1   MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLV 60
           M+++++Q+ +  SL LI RC+ISCI V LTQ  LS+VPRFFAAS  ++Q  LS L+LL++
Sbjct: 1   MLVLDDQKSMRISLKLIGRCMISCIFVFLTQFALSIVPRFFAASSLLIQLPLSALLLLVL 60

Query: 61  QTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLC 120
                 CRR LGV ASAPAFVFFN+LFIWG YI ++R+ +S L+G + N E+ M+IIGL 
Sbjct: 61  LGAGRCCRRFLGVYASAPAFVFFNLLFIWGVYIVILRKVISPLMGIVLNGEIVMLIIGLY 120

Query: 121 SIMSKDPGLITN---------------EFPHLD--KLVEGSELGVDPDNENSLSRKRVRY 163
           SI+S DPG +T+               +  H +  K + G      P  E S S +RVRY
Sbjct: 121 SILSSDPGFVTSRSSCSDNHAEDSFSEDEAHFEILKTLTGGTCHEHP-TEGSFSSRRVRY 179

Query: 164 CKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDK 223
           CK CKA+V+GFDHHCPAFGNCIGQ N+ LF+VLLVGF+ TEASY+  S +F  K Q  D+
Sbjct: 180 CKSCKAYVKGFDHHCPAFGNCIGQKNHVLFMVLLVGFVITEASYIMDSFKFATKFQKMDE 239

Query: 224 SQSENDWVVNLATSTMLFSILQLLWQ 249
           +  E     NL  STMLF +LQ+LWQ
Sbjct: 240 TGQETSLSENLVISTMLFCLLQVLWQ 265

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218192534|gb|EEC74961.1| hypothetical protein OsI_10951 [Oryza sativa Indica Group]

 Score =  245 bits (625), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 117/251 (46%), Positives = 165/251 (65%)

Query: 21  IISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAF 80
           + SC L LL+QL +++VPR F +   +    ++G+V L V  +  + RR +GV ASAP F
Sbjct: 25  LASCGLTLLSQLAVAMVPRLFPSLSLLAMLPVAGVVFLAVIVVGRFWRRFIGVAASAPLF 84

Query: 81  VFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKL 140
           V FNILF+WG Y+ V+R   SSL+  + N E AM++ GL  I S DPG++T E    ++ 
Sbjct: 85  VLFNILFLWGVYVFVIRGGTSSLLDMVINAECAMLLFGLYRIFSGDPGIVTYESSFFEEA 144

Query: 141 VEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGF 200
                +     +E   S  RVR+C  CKA+V G+DHHCPAFGNCIGQ N+ LF+ LL GF
Sbjct: 145 GCKDFVEAICPSEKFSSLPRVRHCNCCKANVRGYDHHCPAFGNCIGQKNHRLFMALLTGF 204

Query: 201 LATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCV 260
           +  E++Y  CS +++ +  N    +SEN   VN+   TMLFS+LQ+LWQAVF +WHIYC+
Sbjct: 205 VVAESTYTMCSTKYITRCINSGTIRSENPMSVNMVIGTMLFSVLQVLWQAVFLIWHIYCI 264

Query: 261 CFNVRTDEWVS 271
           CFN++TDEW++
Sbjct: 265 CFNIKTDEWIN 275

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115452213|ref|NP_001049707.1| Os03g0275400 [Oryza sativa Japonica Group] gi|108707456|gb|ABF95251.1| DHHC zinc finger domain containing protein, expressed [Oryza sativa Japonica Group] gi|113548178|dbj|BAF11621.1| Os03g0275400 [Oryza sativa Japonica Group] gi|215767922|dbj|BAH00151.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  243 bits (619), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 117/248 (47%), Positives = 162/248 (65%)

Query: 23  SCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVF 82
           SC L LL+QL +++VPR F +   +    ++G+V L V  +  + RR +GV ASAP FV 
Sbjct: 27  SCGLTLLSQLAVAMVPRLFPSLSLLAMLPVAGVVFLAVIVVGRFWRRFIGVAASAPLFVL 86

Query: 83  FNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVE 142
           FNILF+WG Y+ V+R   SSL+  + N E AM++ GL  I S DPG++  E    ++   
Sbjct: 87  FNILFLWGVYVFVIRGGTSSLLDMVINAECAMLLFGLYRIFSGDPGIVIYESSFFEEAGC 146

Query: 143 GSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLA 202
              +     +E   S  RVR+C  CKA+V G+DHHCPAFGNCIGQ N+ LF+ LL GF+ 
Sbjct: 147 KDFVEAICPSEKFSSLPRVRHCNCCKANVRGYDHHCPAFGNCIGQKNHRLFMALLTGFVV 206

Query: 203 TEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCF 262
            E++Y  CS +++ +  N    +SEN   VN+   TMLFS+LQ+LWQAVF +WHIYC+CF
Sbjct: 207 AESTYTMCSTKYITRCINSGTIRSENPMSVNMVIGTMLFSVLQVLWQAVFLIWHIYCICF 266

Query: 263 NVRTDEWV 270
           N++TDEWV
Sbjct: 267 NIKTDEWV 274

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222624656|gb|EEE58788.1| hypothetical protein OsJ_10323 [Oryza sativa Japonica Group]

 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 116/251 (46%), Positives = 164/251 (65%)

Query: 21  IISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAF 80
           + SC L LL+QL +++VPR F +   +    ++G+V L V  +  + RR +GV ASAP F
Sbjct: 25  LASCGLTLLSQLAVAMVPRLFPSLSLLAMLPVAGVVFLAVIVVGRFWRRFIGVAASAPLF 84

Query: 81  VFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKL 140
           V FNILF+WG Y+ V+R   SSL+  + N E AM++ GL  I S DPG++  E    ++ 
Sbjct: 85  VLFNILFLWGVYVFVIRGGTSSLLDMVINAECAMLLFGLYRIFSGDPGIVIYESSFFEEA 144

Query: 141 VEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGF 200
                +     +E   S  RVR+C  CKA+V G+DHHCPAFGNCIGQ N+ LF+ LL GF
Sbjct: 145 GCKDFVEAICPSEKFSSLPRVRHCNCCKANVRGYDHHCPAFGNCIGQKNHRLFMALLTGF 204

Query: 201 LATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCV 260
           +  E++Y  CS +++ +  N    +SEN   VN+   TMLFS+LQ+LWQAVF +WHIYC+
Sbjct: 205 VVAESTYTMCSTKYITRCINSGTIRSENPMSVNMVIGTMLFSVLQVLWQAVFLIWHIYCI 264

Query: 261 CFNVRTDEWVS 271
           CFN++TDEW++
Sbjct: 265 CFNIKTDEWIN 275

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357112878|ref|XP_003558232.1| PREDICTED: palmitoyltransferase ZDHHC17-like [Brachypodium distachyon]

 Score =  240 bits (613), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 118/267 (44%), Positives = 170/267 (63%), Gaps = 4/267 (1%)

Query: 7   QRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGW 66
            R   +   ++   ++SC LVL +QL ++ VPRFF +   +    ++GLV L    +  +
Sbjct: 9   HRLRRSPWEVVLSALVSCGLVLFSQLAVATVPRFFPSLSLLAMLPVAGLVFLAAIVVGRF 68

Query: 67  CRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKD 126
            RR +GV ASAP FV FN+LF+WG YI V+R   SSL+  L N E A+++ GL  I+S D
Sbjct: 69  WRRFIGVAASAPLFVLFNVLFMWGVYIFVIRGDTSSLLDMLINAECALLLWGLYRILSGD 128

Query: 127 PGLITNEFPHLDKLVEGSELGVDP--DNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNC 184
           PG++  E   L++   G    VD    +E   S  RVR+C  CKA+V G+DHHCPAFGNC
Sbjct: 129 PGIVAYESSFLEE--AGCNDFVDAICSSEKHPSLSRVRHCNSCKANVRGYDHHCPAFGNC 186

Query: 185 IGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSIL 244
           IGQ N+ LFI LL GF+  E++Y  CS +++ +  N    ++EN   +N+   TMLFS+L
Sbjct: 187 IGQKNHRLFIALLTGFVVAESTYTMCSTKYITRCINSGTIRTENPLSLNMVIGTMLFSVL 246

Query: 245 QLLWQAVFFMWHIYCVCFNVRTDEWVS 271
           Q+LWQ VF +WH+Y +CFN++TDEW++
Sbjct: 247 QVLWQVVFLIWHVYGICFNIKTDEWIN 273

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414866099|tpg|DAA44656.1| TPA: hypothetical protein ZEAMMB73_413571 [Zea mays]

 Score =  231 bits (590), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 113/263 (42%), Positives = 164/263 (62%)

Query: 8   RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWC 67
           R+ S+   ++   + SC LVL +QL +++VPR F     +    ++GLV +    L    
Sbjct: 12  RRSSSQWEVLWSALASCGLVLFSQLAVAMVPRLFPFLSLLAMLPIAGLVFIAAIVLGRLW 71

Query: 68  RRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDP 127
           RR +GV ASAP FV FNIL +WG Y+ V+R+  SSL+  L N E A+++ G   I+S DP
Sbjct: 72  RRFIGVAASAPLFVLFNILLLWGVYVFVIRRETSSLLDMLINAECALLLWGFYRILSGDP 131

Query: 128 GLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQ 187
           G++  +  +L++      +     +E      RVR C  CKA++ G+DHHCPAFG CIGQ
Sbjct: 132 GIVACDSSYLEEAGCKDFVEAIYSSEKLPMLSRVRQCTWCKANIRGYDHHCPAFGTCIGQ 191

Query: 188 NNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLL 247
            N+ LF+ LL GF+  E++Y  CS +++ +  +    +SEN   +N+  ST LFSILQ+L
Sbjct: 192 KNHRLFMALLTGFVVAESTYTMCSTKYITRCISSGTIRSENPVSLNIVISTTLFSILQVL 251

Query: 248 WQAVFFMWHIYCVCFNVRTDEWV 270
           WQ VF MWHIYC+CFN++TDEWV
Sbjct: 252 WQIVFLMWHIYCICFNIKTDEWV 274

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495287|ref|NP_001148505.1| DHHC zinc finger domain containing protein [Zea mays] gi|223945801|gb|ACN26984.1| unknown [Zea mays] gi|414866098|tpg|DAA44655.1| TPA: DHHC zinc finger domain containing protein [Zea mays]

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 112/264 (42%), Positives = 165/264 (62%)

Query: 8   RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWC 67
           R+ S+   ++   + SC LVL +QL +++VPR F     +    ++GLV +    L    
Sbjct: 12  RRSSSQWEVLWSALASCGLVLFSQLAVAMVPRLFPFLSLLAMLPIAGLVFIAAIVLGRLW 71

Query: 68  RRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDP 127
           RR +GV ASAP FV FNIL +WG Y+ V+R+  SSL+  L N E A+++ G   I+S DP
Sbjct: 72  RRFIGVAASAPLFVLFNILLLWGVYVFVIRRETSSLLDMLINAECALLLWGFYRILSGDP 131

Query: 128 GLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQ 187
           G++  +  +L++      +     +E      RVR C  CKA++ G+DHHCPAFG CIGQ
Sbjct: 132 GIVACDSSYLEEAGCKDFVEAIYSSEKLPMLSRVRQCTWCKANIRGYDHHCPAFGTCIGQ 191

Query: 188 NNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLL 247
            N+ LF+ LL GF+  E++Y  CS +++ +  +    +SEN   +N+  ST LFSILQ+L
Sbjct: 192 KNHRLFMALLTGFVVAESTYTMCSTKYITRCISSGTIRSENPVSLNIVISTTLFSILQVL 251

Query: 248 WQAVFFMWHIYCVCFNVRTDEWVS 271
           WQ VF MWHIYC+CFN++TDEW++
Sbjct: 252 WQIVFLMWHIYCICFNIKTDEWIN 275

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195619870|gb|ACG31765.1| DHHC zinc finger domain containing protein [Zea mays]

 Score =  229 bits (585), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 111/264 (42%), Positives = 164/264 (62%)

Query: 8   RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWC 67
           R+ S+   ++   + SC LVL +QL +++VPR F     +    ++GLV +    L    
Sbjct: 12  RRSSSQWEVLWSALASCGLVLFSQLAVAMVPRLFPFLSLLAMLPIAGLVFIAAIVLGRLW 71

Query: 68  RRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDP 127
           RR +GV ASAP FV FNIL +WG Y+ V+R+  SSL+  L N E  +++ G   I+S DP
Sbjct: 72  RRFIGVAASAPLFVLFNILLLWGVYVFVIRRETSSLLDMLINAECTLLLWGFYRILSGDP 131

Query: 128 GLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQ 187
           G++  +  +L++      +     +E      RVR C  CKA++ G+DHHCPAFG CIGQ
Sbjct: 132 GIVACDSSYLEEAGCKDFVEAIYSSEKLPMLSRVRQCTWCKANIRGYDHHCPAFGTCIGQ 191

Query: 188 NNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLL 247
            N+ LF+ LL GF+  E++Y  CS +++ +  +    +SEN   +N+  ST LFSILQ+L
Sbjct: 192 KNHRLFMALLTGFVVAESTYTMCSTKYITRCISSGTIRSENPVSLNIVISTTLFSILQVL 251

Query: 248 WQAVFFMWHIYCVCFNVRTDEWVS 271
           WQ VF MWHIYC+CFN++TDEW++
Sbjct: 252 WQIVFLMWHIYCICFNIKTDEWIN 275

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
UNIPROTKB|Q08DX8	299	ZDHHC3 "Uncharacterized protei	0.703	0.658	0.261	3.4e-11
UNIPROTKB|F1SRC6	297	ZDHHC3 "Uncharacterized protei	0.703	0.663	0.257	4.4e-11
UNIPROTKB|E2QS45	298	ZDHHC3 "Uncharacterized protei	0.703	0.661	0.257	4.4e-11
UNIPROTKB|E2RND6	299	ZDHHC3 "Uncharacterized protei	0.703	0.658	0.257	4.5e-11
MGI|MGI:1926134	299	Zdhhc3 "zinc finger, DHHC doma	0.703	0.658	0.257	8.4e-11
RGD|1309041	299	Zdhhc3 "zinc finger, DHHC-type	0.703	0.658	0.252	1.1e-10
UNIPROTKB|E1BXI1	299	E1BXI1 "Uncharacterized protei	0.707	0.662	0.258	5e-10
ZFIN|ZDB-GENE-040718-346	299	zdhhc7 "zinc finger, DHHC-type	0.682	0.638	0.272	3.7e-09
UNIPROTKB|E2RND4	327	ZDHHC3 "Uncharacterized protei	0.467	0.400	0.290	3.7e-09
UNIPROTKB|Q9NYG2	327	ZDHHC3 "Palmitoyltransferase Z	0.467	0.400	0.290	3.7e-09

UNIPROTKB|Q08DX8 ZDHHC3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 171 (65.3 bits), Expect = 3.4e-11, P = 3.4e-11
 Identities = 56/214 (26%), Positives = 95/214 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R  V S+I GL FN+   + +   C  M  DPG + 
Sbjct:    47 CAIVTWFLVLYAEFVVLFVMLIPSRDYVYSVINGLVFNLLAFLALASHCRAMLTDPGAVP 106

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   107 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 165

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLFS- 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F  
Sbjct:   166 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEG 224

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDEWVSPQVKQ 276
             +L L++ +V F   ++ +C    TDE    Q+K+
Sbjct:   225 LLFLIFTSVMFGTQVHSIC----TDETGIEQLKK 254

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1SRC6 ZDHHC3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 170 (64.9 bits), Expect = 4.4e-11, P = 4.4e-11
 Identities = 55/214 (25%), Positives = 95/214 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R  V S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    46 CAIVTWFLVLYAEFVVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 105

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   106 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 164

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLFS- 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F  
Sbjct:   165 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEG 223

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDEWVSPQVKQ 276
             +L L++ +V F   ++ +C    TDE    Q+K+
Sbjct:   224 LLFLIFTSVMFGTQVHSIC----TDETGIEQLKK 253

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2QS45 ZDHHC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 170 (64.9 bits), Expect = 4.4e-11, P = 4.4e-11
 Identities = 55/214 (25%), Positives = 95/214 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R  V S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    46 CAIVTWFLVLYAEFVVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 105

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   106 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 164

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLFS- 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F  
Sbjct:   165 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEG 223

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDEWVSPQVKQ 276
             +L L++ +V F   ++ +C    TDE    Q+K+
Sbjct:   224 LLFLIFTSVMFGTQVHSIC----TDETGIEQLKK 253

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2RND6 ZDHHC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 170 (64.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 55/214 (25%), Positives = 95/214 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R  V S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    47 CAIVTWFLVLYAEFVVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 106

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   107 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 165

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLFS- 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F  
Sbjct:   166 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEG 224

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDEWVSPQVKQ 276
             +L L++ +V F   ++ +C    TDE    Q+K+
Sbjct:   225 LLFLIFTSVMFGTQVHSIC----TDETGIEQLKK 254

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:1926134 Zdhhc3 "zinc finger, DHHC domain containing 3" [Mus musculus (taxid:10090)]

 Score = 168 (64.2 bits), Expect = 8.4e-11, P = 8.4e-11
 Identities = 55/214 (25%), Positives = 95/214 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + V  R    S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    47 CAIVTWFLVLYAEFVVLFVMLVPSRDYAYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 106

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   107 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 165

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLF-S 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F +
Sbjct:   166 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEA 224

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDEWVSPQVKQ 276
             +L L++ +V F   ++ +C    TDE    Q+K+
Sbjct:   225 LLFLIFTSVMFGTQVHSIC----TDETGIEQLKK 254

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006605 "protein targeting" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1309041 Zdhhc3 "zinc finger, DHHC-type containing 3" [Rattus norvegicus (taxid:10116)]

 Score = 167 (63.8 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 54/214 (25%), Positives = 95/214 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R    S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    47 CAIVTWFLVLYAEFVVLFVMLIPSRDYAYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 106

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   107 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 165

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLF-S 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F +
Sbjct:   166 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEA 224

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDEWVSPQVKQ 276
             +L L++ +V F   ++ +C    TDE    Q+K+
Sbjct:   225 LLFLIFTSVMFGTQVHSIC----TDETGIEQLKK 254

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0006605 "protein targeting" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IEA;ISO

GO:0018345 "protein palmitoylation" evidence=IEA;ISO

UNIPROTKB|E1BXI1 E1BXI1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 162 (62.1 bits), Expect = 5.0e-10, P = 5.0e-10
 Identities = 56/217 (25%), Positives = 95/217 (43%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-----RQAVSSLIGG-LFNIEVAMIIIGLCSIMSKDP 127
             C  A A V + ++F   F + +V     R  V S+I G LFN    + +      M  DP
Sbjct:    43 CGIACAVVTWMLVFYADFVVLLVMLVPSRDYVYSVINGTLFNTLAFLALASHFRAMLTDP 102

Query:   128 GLI-----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFG 182
             G +     T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   
Sbjct:   103 GAVPKGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVN 161

Query:   183 NCIGQNN--YFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTML 240
             NC+G+NN  YF+   + +  ++  A  +          +++ K  S +     +    + 
Sbjct:   162 NCVGENNQKYFVLFTMYIALISLHALIMVGFHFLYCFEEDWTKCSSFSPPTTVILLILLC 221

Query:   241 F-SILQLLWQAVFFMWHIYCVCFNVRTDEWVSPQVKQ 276
             F ++L L++ +V F   ++ +C    TDE    Q+K+
Sbjct:   222 FEALLFLIFTSVMFGTQVHSIC----TDETGIEQLKK 254

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006605 "protein targeting" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

ZFIN|ZDB-GENE-040718-346 zdhhc7 "zinc finger, DHHC-type containing 7" [Danio rerio (taxid:7955)]

 Score = 155 (59.6 bits), Expect = 3.7e-09, P = 3.7e-09
 Identities = 57/209 (27%), Positives = 90/209 (43%)

Query:    74 CASAPAFVFFNILFIWGFYIAVVRQAVS-----SLIGGL-FNIEVAMIIIGLCSIMSKDP 127
             C    AF+ ++++    F +  V    S     +LI G+ FN    + +      M  DP
Sbjct:    37 CGMVCAFMTWSLVMYAEFVVNFVMLLPSKNFWYTLINGVAFNFLAVLALTSHLRTMLTDP 96

Query:   128 GLI-----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFG 182
             G +     T E+    +L  G  +   P    S+  +R  +C ICK  +   DHHCP   
Sbjct:    97 GAVPKGNATKEYMESLQLKPGEVIYKCPKC-CSIKPERAHHCSICKRCIRKMDHHCPWVN 155

Query:   183 NCIGQNNYFLFIVLLVGFLATEASYVACSAQF----VGKSQNFDKSQSENDWVVNLATST 238
             NC+G+NN   F VL   ++A+ + +  C + F      K Q  + S       V L    
Sbjct:   156 NCVGENNQ-RFFVLFTMYIASISLHALCLSGFHFFTCVKVQWNECSDFSPPVAVMLLIFL 214

Query:   239 MLFSILQLLWQAVFFMWHIYCVCFNVRTD 267
              L ++L L + AV F   I+ +C N  T+
Sbjct:   215 CLEALLFLTFTAVMFGTQIHSIC-NDETE 242

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E2RND4 ZDHHC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 156 (60.0 bits), Expect = 3.7e-09, P = 3.7e-09
 Identities = 41/141 (29%), Positives = 64/141 (45%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R  V S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    47 CAIVTWFLVLYAEFVVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 106

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   107 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 165

Query:   187 QNN--YFLFIVLLVGFLATEA 205
             +NN  YF+   + +  ++  A
Sbjct:   166 ENNQKYFVLFTMYIALISLHA 186

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IEA

GO:0006605 "protein targeting" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q9NYG2 ZDHHC3 "Palmitoyltransferase ZDHHC3" [Homo sapiens (taxid:9606)]

 Score = 156 (60.0 bits), Expect = 3.7e-09, P = 3.7e-09
 Identities = 41/141 (29%), Positives = 64/141 (45%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R  V S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    47 CAIVTWFLVLYAEFVVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 106

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   107 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 165

Query:   187 QNN--YFLFIVLLVGFLATEA 205
             +NN  YF+   + +  ++  A
Sbjct:   166 ENNQKYFVLFTMYIALISLHA 186

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006605 "protein targeting" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	280
pfam01529	167	pfam01529, zf-DHHC, DHHC palmitoyltransferase	3e-16
COG5273	309	COG5273, COG5273, Uncharacterized protein containi	9e-11

>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase

 Score = 74.1 bits (182), Expect = 3e-16
 Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 9/161 (5%)

Query: 119 LCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLS-------RK--RVRYCKICKA 169
               +  DPG +       ++  +  E   + D E+ L         K  R  +C++C  
Sbjct: 4   YFKTIFTDPGYVPKNPTEKEQEKQPDEESEEGDEEDELKFCSTCNIIKPPRSHHCRVCNR 63

Query: 170 HVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSEND 229
            V  FDHHCP   NCIG+ N+  F++ L+         +  S  ++       +      
Sbjct: 64  CVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYLILLLVLSFYYLVYLIRNIELFFFLI 123

Query: 230 WVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWV 270
             +  +   ++ S+  LL+ +    +H+Y +  N+ T E++
Sbjct: 124 LSLFSSIILLVLSLFFLLFLSFLLFFHLYLILKNITTYEYI 164

This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

 Score = 60.9 bits (148), Expect = 9e-11
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 4/110 (3%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQF-VGKS 218
           R  +C IC   V  FDHHCP   NC+G  NY  F   L+ +    A  V  S  + +   
Sbjct: 122 RSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLL-YTILVALVVLLSTAYYIAGI 180

Query: 219 QNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE 268
            +     S     +    S +      +    +  ++ IY +  N+ T E
Sbjct: 181 FSIRHDTSLAICFLIFGCSLLGVVFFIIT--TLLLLFLIYLILNNLTTIE 228

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	280
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	100.0
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	100.0
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	100.0
KOG1314	414	consensus DHHC-type Zn-finger protein [General fun	100.0
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	100.0
KOG1313	309	consensus DHHC-type Zn-finger proteins [General fu	100.0
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.98
KOG1312	341	consensus DHHC-type Zn-finger proteins [General fu	99.97
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	92.87
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	92.74
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	92.54
PF13240	23	zinc_ribbon_2: zinc-ribbon domain	88.62
PRK04136	48	rpl40e 50S ribosomal protein L40e; Provisional	88.03
PF13248	26	zf-ribbon_3: zinc-ribbon domain	85.89
PF12773	50	DZR: Double zinc ribbon	80.08

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=2.4e-41  Score=305.38  Aligned_cols=194  Identities=19%  Similarity=0.282  Sum_probs=145.4

Q ss_pred             chhHHHHHHHhhhhhhhhhcccc--------hhhHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCCCCCchhhhc------
Q 023587           77 APAFVFFNILFIWGFYIAVVRQA--------VSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVE------  142 (280)
Q Consensus        77 ~P~~v~~~~~~~w~~~~~~~~~~--------~~~~~~iif~~l~~~~~~~~~~~~~~DPG~vp~~~~~~~~~~~------  142 (280)
                      .|+ +++.....|.+|+++....        ......+.++.+.++..|+|++++++|||.+|.....+.++++      
T Consensus        14 ~~~-~~i~~~~~~~yy~~v~~~c~~~i~~~~~~~~~ll~~~~ll~m~~~sy~~~vf~~pg~vp~~~~~~~~~~~~~~~~~   92 (307)
T KOG1315|consen   14 IPV-LIILLVIGWTYYVYVAVLCILSISLTIPSVLLLLLFHLLLIMFLWSYFRTVFTDPGRVPDSYRPSVEDEDSLENGS   92 (307)
T ss_pred             hhh-eeeeeeEEEEEEEeehhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHheeEecCCCCccccCCCcCccccccccC
Confidence            555 4455678888888876543        2344567888999999999999999999999976443321110      


Q ss_pred             ------------CCCCCCCCCCCCCCCCCCcccccccCceecccccccccccccccccchHHHHHHHHHHHHHHHHHHHH
Q 023587          143 ------------GSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVAC  210 (280)
Q Consensus       143 ------------~~~~~~~C~~C~~~kP~RS~HC~~C~~CV~rfDHHCpWl~nCIG~~N~r~Fi~Fl~~~~~~~~~~~~~  210 (280)
                                  .+...++|.+|+..||+|||||+.|+|||+||||||||+|||||.+|||+|++|+++..+.....+..
T Consensus        93 ~~~~~~~~~~~~~~g~~R~C~kC~~iKPdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~NyKfF~lfl~y~~l~~~~~lv~  172 (307)
T KOG1315|consen   93 DNERDLPGYTRTSDGAVRYCDKCKCIKPDRAHHCSVCNRCVLKMDHHCPWINNCVGFRNYKFFLLFLFYTNLYSIYVLVT  172 (307)
T ss_pred             cccccceeeEecCCCCceeecccccccCCccccchhhhhhhhccccCCcceeceecccchHHHHHHHHHHHHHHHHHHHH
Confidence                        12256899999999999999999999999999999999999999999999999999999887655555


Q ss_pred             HHHHhhhhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhccccc
Q 023587          211 SAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVSPQ  273 (280)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ll~~h~~lI~~n~TT~E~~~~~  273 (280)
                      ....+.+....+.  ...........+.++.+...++.+++++++|+++|++|+||+|..+++
T Consensus       173 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~f~i~l~~~l~~h~~Li~~N~TTiE~~~~~  233 (307)
T KOG1315|consen  173 TLIGFTKYFQGGA--GPSSLLLFFIVFLFLVAIAFSISLSGLLCFHTYLILKNKTTIEAYKSP  233 (307)
T ss_pred             HHHHHHHHHhccc--cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhccc
Confidence            4444444431111  112222223344555666667777789999999999999999988754

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=100.00  E-value=2.6e-41  Score=285.12  Aligned_cols=157  Identities=18%  Similarity=0.268  Sum_probs=120.1

Q ss_pred             HHHHHHhhcCCCcCCCC-CCCch---------------hhhcCCCCCCCCCCCCCCCCCCcccccccCceeccccccccc
Q 023587          117 IGLCSIMSKDPGLITNE-FPHLD---------------KLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPA  180 (280)
Q Consensus       117 ~~~~~~~~~DPG~vp~~-~~~~~---------------~~~~~~~~~~~C~~C~~~kP~RS~HC~~C~~CV~rfDHHCpW  180 (280)
                      ++|+++..+|||++|+. .+.++               ...+.+...++|.+|+.+||+|||||+.||+||.||||||||
T Consensus         2 ~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~w   81 (174)
T PF01529_consen    2 WSYFLTIFIDPGYVPRSNPDEDQRQEEKEEEQNQSIDSPEDDENGELKYCSTCKIIKPPRSHHCRVCNRCVLRFDHHCPW   81 (174)
T ss_pred             EEehhhheECCcccCCccccccccccccccccchhhhhhccccCCCCEECcccCCcCCCcceeccccccccccccccchh
Confidence            57889999999999998 11110               001123457899999999999999999999999999999999


Q ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023587          181 FGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCV  260 (280)
Q Consensus       181 l~nCIG~~N~r~Fi~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ll~~h~~lI  260 (280)
                      +|||||.+|||+|++|+++..++.++....++.++....................+..++.+++..++++.+++.|++++
T Consensus        82 ~~~cIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  161 (174)
T PF01529_consen   82 LGNCIGRRNHRYFLLFLLYLCLYCLYFFILSLYYLVRYIPSISFSSFWIFSNFSSIFLLIISIFFFIFVGFLLIFQLYLI  161 (174)
T ss_pred             hccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999988777666655555443322211111111111124566777888999999999999999


Q ss_pred             hcCchhhhccccc
Q 023587          261 CFNVRTDEWVSPQ  273 (280)
Q Consensus       261 ~~n~TT~E~~~~~  273 (280)
                      ++|+||+|.+|+|
T Consensus       162 ~~n~Tt~E~~~~~  174 (174)
T PF01529_consen  162 LRNITTYERIKRK  174 (174)
T ss_pred             HcCCcHHHHHHcC
Confidence            9999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=3.8e-37  Score=281.43  Aligned_cols=163  Identities=23%  Similarity=0.237  Sum_probs=112.8

Q ss_pred             HHHHHHHHHHHHHhh---cCCCcCCCCCCCchhh---h---------cCCCCCCCCCCCCCCCCCCcccccccCceeccc
Q 023587          110 IEVAMIIIGLCSIMS---KDPGLITNEFPHLDKL---V---------EGSELGVDPDNENSLSRKRVRYCKICKAHVEGF  174 (280)
Q Consensus       110 ~l~~~~~~~~~~~~~---~DPG~vp~~~~~~~~~---~---------~~~~~~~~C~~C~~~kP~RS~HC~~C~~CV~rf  174 (280)
                      ++....+.....+..   +|||.+|++.+...+.   .         ..+.+.++|.+|+..||+|||||+.||+||.||
T Consensus        61 if~~~~~~~~~~~~~~~~sdpg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~rPpRs~HCsvC~~CV~rf  140 (299)
T KOG1311|consen   61 IFFLLNILNLMLACFRMLSDPGIVPRADDEQIEDPERAPLYKNVDVNGIQVEWKYCDTCQLYRPPRSSHCSVCNNCVLRF  140 (299)
T ss_pred             HHHHHHHHHHHHHHhcccCCCceecCcccCCCCCccccccCCCcccCCcccceEEcCcCcccCCCCcccchhhccccccc
Confidence            333333444444443   4999999953211111   0         011246899999999999999999999999999


Q ss_pred             ccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCC-CCC--CchhHHHHHHHHHHHHHHHHHHHHH
Q 023587          175 DHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDK-SQS--ENDWVVNLATSTMLFSILQLLWQAV  251 (280)
Q Consensus       175 DHHCpWl~nCIG~~N~r~Fi~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~i~~~~~~~~~~~~~~~  251 (280)
                      ||||||+|||||+||||+|+.|++++.++...........+........ ...  .........+...+.+++....++.
T Consensus       141 DHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  220 (299)
T KOG1311|consen  141 DHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFYELLQRADNLKVNLTPVLIPAGTFLSALLGLLSALFLAFTSA  220 (299)
T ss_pred             CCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999998777655444443333322211111 111  1122223344455778888888899


Q ss_pred             HHHHHHHHHhcCchhhhcccc
Q 023587          252 FFMWHIYCVCFNVRTDEWVSP  272 (280)
Q Consensus       252 Ll~~h~~lI~~n~TT~E~~~~  272 (280)
                      |+.+|++++.+|+||+|.++.
T Consensus       221 l~~fh~~li~~~~Tt~e~~~~  241 (299)
T KOG1311|consen  221 LLCFHIYLIKSGSTTYESIKS  241 (299)
T ss_pred             HHHhheeeEecCcchhhhhhc
Confidence            999999999999999999874

>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=1.2e-37  Score=278.54  Aligned_cols=199  Identities=16%  Similarity=0.128  Sum_probs=137.9

Q ss_pred             hhhcccccccchhHHHHHH-Hhhhh-hhh---hh--cccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCCCCCchh
Q 023587           67 CRRLLGVCASAPAFVFFNI-LFIWG-FYI---AV--VRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDK  139 (280)
Q Consensus        67 ~~~~~~~~~~~P~~v~~~~-~~~w~-~~~---~~--~~~~~~~~~~iif~~l~~~~~~~~~~~~~~DPG~vp~~~~~~~~  139 (280)
                      .+|++.|   .|.+.+..+ +++|. .|.   +.  .....+....+.|.....+.+++|+.+++++||++|+.+.++..
T Consensus         9 ~rr~~hw---Gpi~alsiit~i~~~~~~~n~lww~p~ss~~g~~n~i~f~~~~~m~~~ny~~A~~~gPG~vp~~wkPe~~   85 (414)
T KOG1314|consen    9 FRRFLHW---GPITALSIITIITSTTGYMNSLWWFPLSSFLGVPNQITFLLWTSMILYNYFNAIFTGPGFVPLGWKPENP   85 (414)
T ss_pred             hhheecc---ccHHHHHHHHHHHHHHHHhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCC
Confidence            5677887   776533322 22222 222   11  11224556777888888999999999999999999998776532


Q ss_pred             hhcCCCCCCCCCCCCCCCCCCcccccccCceecccccccccccccccccchHHHHHHHHHHHHHHH--HHHHH--HHHHh
Q 023587          140 LVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEA--SYVAC--SAQFV  215 (280)
Q Consensus       140 ~~~~~~~~~~C~~C~~~kP~RS~HC~~C~~CV~rfDHHCpWl~nCIG~~N~r~Fi~Fl~~~~~~~~--~~~~~--~~~~~  215 (280)
                      .  ++.-.+||.+|+.+|+||||||+.|||||.+|||||||+|||||.+||.+|..||++..+++.  ..+.+  .+.-+
T Consensus        86 ~--D~~~lqfCk~CqgYKapRSHHCrkCnrCvmkMDHHCPWinnCVG~aNh~~F~~FLlf~ivG~ih~tiI~~~~~~~~I  163 (414)
T KOG1314|consen   86 K--DEMFLQFCKKCQGYKAPRSHHCRKCNRCVMKMDHHCPWINNCVGWANHAYFLRFLLFSIVGCIHGTIILVCAQYRGI  163 (414)
T ss_pred             h--hHHHHHHHhhccCcCCCccccchHHHHHHHhhccCCcchhhcccccccHHHHHHHHHHHHhcccceeeehhHHHHHH
Confidence            2  223357999999999999999999999999999999999999999999999999998877432  11111  11111


Q ss_pred             hhhcc--CCC----CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcc
Q 023587          216 GKSQN--FDK----SQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWV  270 (280)
Q Consensus       216 ~~~~~--~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ll~~h~~lI~~n~TT~E~~  270 (280)
                      ...+.  ...    ...-...+....++.+.+++...+.+++|++.|+.+|.+|+|.+|..
T Consensus       164 y~~W~~~~g~~hlp~v~ft~~~li~~vfslgla~gv~la~t~Lf~~qlk~Il~nrt~IE~w  224 (414)
T KOG1314|consen  164 YFRWYIKYGLRHLPIVFFTLSSLIALVFSLGLAIGVVLALTMLFFIQLKQILNNRTGIESW  224 (414)
T ss_pred             HHHHHhhcccccCceeeccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCcchHHH
Confidence            11111  110    00112222333445556677777888999999999999999999964

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=100.00  E-value=1.7e-36  Score=276.80  Aligned_cols=185  Identities=18%  Similarity=0.304  Sum_probs=137.4

Q ss_pred             HhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCCCCCchhh--------hcCCCCCCCCCCCCCCC
Q 023587           86 LFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKL--------VEGSELGVDPDNENSLS  157 (280)
Q Consensus        86 ~~~w~~~~~~~~~~~~~~~~iif~~l~~~~~~~~~~~~~~DPG~vp~~~~~~~~~--------~~~~~~~~~C~~C~~~k  157 (280)
                      ++.|.....+..........+.+.+......+++++...+|||+.+++.....-+        ......+++|.+|+.+|
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~K  119 (309)
T COG5273          40 IVVYTLLVIVKSLSLVVLFIILFIVILVLASFSYLLLLVSDPGYLGENITLSGYRETISRLLDDGKFGTENFCSTCNIYK  119 (309)
T ss_pred             HHHHhhhheeeeccchhhhhhhhhhhhhhHHHhhHHHhhcCCCccCccccccchhhhhhhhhhcCccccceecccccccc
Confidence            4556555555555566677778888888999999999999999999663322111        12234688999999999


Q ss_pred             CCCcccccccCceecccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhHHHHHHH
Q 023587          158 RKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATS  237 (280)
Q Consensus       158 P~RS~HC~~C~~CV~rfDHHCpWl~nCIG~~N~r~Fi~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  237 (280)
                      |+|||||+.||+||+||||||||+|||||.+|||+|+.|+++........+.....++.........  ...+...++..
T Consensus       120 P~RS~HC~~Cn~CV~k~DHHC~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~  197 (309)
T COG5273         120 PPRSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHD--TSLAICFLIFG  197 (309)
T ss_pred             CCCCccchhhcchhhccCccCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCC--hHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999877666666555555544332222  12221222222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcccc
Q 023587          238 TMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVSP  272 (280)
Q Consensus       238 ~~~~~~~~~~~~~~Ll~~h~~lI~~n~TT~E~~~~  272 (280)
                      ....+...++.+..++.++.+++..|+|+.|....
T Consensus       198 ~~~~~~~~f~~~~~~~~~~~~~~~~~~t~~e~~~~  232 (309)
T COG5273         198 CSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQI  232 (309)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Confidence            23445555667778889999999999999998753

>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=4e-33  Score=242.63  Aligned_cols=126  Identities=18%  Similarity=0.247  Sum_probs=94.6

Q ss_pred             CCCCCCCCCCCCCCCcccccccCceecccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccCCC-
Q 023587          146 LGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKS-QNFDK-  223 (280)
Q Consensus       146 ~~~~C~~C~~~kP~RS~HC~~C~~CV~rfDHHCpWl~nCIG~~N~r~Fi~Fl~~~~~~~~~~~~~~~~~~~~~-~~~~~-  223 (280)
                      ...+|.+|+.+||||+|||+.|||||+||||||||+|||||..|||||++|++++.++..+..+.....+... ....+ 
T Consensus       101 ~~SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NHryFFlFl~~ltlat~~~~i~~~~~w~~~le~~~~~  180 (309)
T KOG1313|consen  101 NDSFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNHRYFFLFLFYLTLATSYAAIMCVYTWIDHLEPIEEI  180 (309)
T ss_pred             cccHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhc
Confidence            3478999999999999999999999999999999999999999999999999999998877655544333222 11110 


Q ss_pred             ----CC--CCc-h---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhccc
Q 023587          224 ----SQ--SEN-D---------WVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVS  271 (280)
Q Consensus       224 ----~~--~~~-~---------~~~~~~i~~~~~~~~~~~~~~~Ll~~h~~lI~~n~TT~E~~~  271 (280)
                          .+  ... +         +...-+......+....+.++.+..+|.++|.+|.|.+|...
T Consensus       181 tay~~d~~h~~Pp~~i~r~~~~i~~t~~~~~~fls~~~lv~vg~l~~W~~vlI~~G~tsi~~~~  244 (309)
T KOG1313|consen  181 TAYASDVAHVAPPPSILRVYKNITRTSIANLWFLSVRVLVAVGLLTAWHAVLISRGETSIEQLI  244 (309)
T ss_pred             ccccCcccccCCChhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheeeehhhhhHHHHH
Confidence                00  000 0         001112334555666778889999999999999999999753

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.98  E-value=8e-32  Score=257.59  Aligned_cols=252  Identities=21%  Similarity=0.293  Sum_probs=153.8

Q ss_pred             hhHHHHHHHHHHHHHHHHhhhhhhhchhhHHHHHHHHHHHHHH-----HHhhhchhhh-cccccccchhH-HHHHHHhhh
Q 023587           17 ICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLL-----VQTLCGWCRR-LLGVCASAPAF-VFFNILFIW   89 (280)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~l~-----~~~~~~~~~~-~~~~~~~~P~~-v~~~~~~~w   89 (280)
                      .++..+..+.-.    .+.+.|+++.+++.+..+-.+..+...     +.......++ +.....-.|+. .++....+|
T Consensus       278 ~~~~~~~~~~f~----~~~~~~~~~~~~~g~i~~~~~~w~i~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fw  353 (600)
T KOG0509|consen  278 LGSKLAALIFFI----FLGLFYFISSWLPGVIFLINSLWLIKGLALGKLVLTCLCATRKIVGFLLRPPLLSGFFLSTLFW  353 (600)
T ss_pred             hhhHHHHHHHHH----HHHHHHHHHhhccchhhhhhhHHHHhhhhhhhhhhheeccchhhccccccchhHHHHHHHHHHH
Confidence            445555444433    667777777777776655554221111     0000001111 11111123433 455567777


Q ss_pred             hhhhhhcc--cchhhHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCCCCCchhh-----hcCC-CCC-CCCCCCCCCCCCC
Q 023587           90 GFYIAVVR--QAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKL-----VEGS-ELG-VDPDNENSLSRKR  160 (280)
Q Consensus        90 ~~~~~~~~--~~~~~~~~iif~~l~~~~~~~~~~~~~~DPG~vp~~~~~~~~~-----~~~~-~~~-~~C~~C~~~kP~R  160 (280)
                      .++.+...  +...+.....+.+..+..++++.+...+|||++|...+...+.     +.++ ..+ +||.+|.++||.|
T Consensus       354 ~~~~w~~~i~~~~~~~~~~~~i~~~l~~~~~f~~~~rsDPg~i~~~~~~~~~tIs~l~d~gkf~~en~FC~~clirKp~r  433 (600)
T KOG0509|consen  354 FYYFWFSKITPYTLFDFHYCFIISVLAYFITFGLFLRSDPGFIPTSTEVGRETISQLIDFGKFDLENRFCLTCLIRKPLR  433 (600)
T ss_pred             HHHhhheeccchhhhhhHHHHHHHHHHHHHHHHHHhccCCCCCCCchhhHHHHHHHhhccccccccccceeeeeeecCCc
Confidence            77666541  1122333444445555666677788889999999986654221     1111 234 6999999999999


Q ss_pred             cccccccCceecccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhHHHHHHHHH-
Q 023587          161 VRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTM-  239 (280)
Q Consensus       161 S~HC~~C~~CV~rfDHHCpWl~nCIG~~N~r~Fi~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-  239 (280)
                      ||||+.|||||+||||||||++||||.+|||+|+.|++.+...+.++++....|+....+..     ..+.. .+..+. 
T Consensus       434 Skhc~vcnrcVarfDHhCPwi~ncVG~kNh~~F~~Fl~~l~~~~~~~l~~~~~y~~~~~~~~-----~~~~~-~l~~~~~  507 (600)
T KOG0509|consen  434 SKHCSVCNRCVARFDHHCPWIGNCVGLKNHRLFVFFLLTLLTVIVFYLYLCLYYIMNLENAS-----TIYVG-FLIAVQA  507 (600)
T ss_pred             cchhhhhHHHHhccccCCCccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH-----HHHHH-HHHHHHH
Confidence            99999999999999999999999999999999999999999888888888777776443211     01111 010000 


Q ss_pred             ------------HHHHHHHHHHHHHH-HHHHHHHhcCchhhhcccccchhhc
Q 023587          240 ------------LFSILQLLWQAVFF-MWHIYCVCFNVRTDEWVSPQVKQIL  278 (280)
Q Consensus       240 ------------~~~~~~~~~~~~Ll-~~h~~lI~~n~TT~E~~~~~~~~~l  278 (280)
                                  ...-+...|..... +.|...++.++||+|.++.+|++++
T Consensus       508 ~~~~~~~~~~~~~n~~~~~t~~~~~~~~~~~~~~c~~~tt~e~~n~~r~~~~  559 (600)
T KOG0509|consen  508 FRIPKPVTGNLLGNEDLNPTWGSTSTKCQHYNCACLHLTTNEQINVKRYEHL  559 (600)
T ss_pred             HhCCccceeeeeeccccccccccccccccccceeeecccHHHHHHHHHhhcc
Confidence                        00011112333333 3344568899999999998877654

>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=99.97  E-value=5e-31  Score=230.68  Aligned_cols=110  Identities=26%  Similarity=0.391  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCcCCCCCCCch-hhhcCC----CCCCCCCCCCCCCCCCcccccccCceecccccccc
Q 023587          105 GGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLD-KLVEGS----ELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCP  179 (280)
Q Consensus       105 ~iif~~l~~~~~~~~~~~~~~DPG~vp~~~~~~~-~~~~~~----~~~~~C~~C~~~kP~RS~HC~~C~~CV~rfDHHCp  179 (280)
                      -+......++-..++..++.+|||.+.++..... +.-+.|    .....|+||+.+||.||||||.|||||.||||||.
T Consensus       101 ~il~~l~vivp~i~f~ltc~snpg~i~k~n~s~~~~~ypYDy~if~k~~kCSTCki~KPARSKHCsiCNrCV~rfDHHCi  180 (341)
T KOG1312|consen  101 LILPYLLVIVPLIFFTLTCGSNPGIITKANESLFLHVYPYDYVIFPKNVKCSTCKIRKPARSKHCSICNRCVHRFDHHCI  180 (341)
T ss_pred             HHHHHHHHHHHHHHHhhhhcCCCCccchhhhccceeccCccceeecCCCccccccCCCccccccchHHHHHHHHhccceE
Confidence            3444455566677888999999999988754332 111222    23478999999999999999999999999999999


Q ss_pred             cccccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 023587          180 AFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFV  215 (280)
Q Consensus       180 Wl~nCIG~~N~r~Fi~Fl~~~~~~~~~~~~~~~~~~  215 (280)
                      |+|||||++|.|||++|+++... .+.+......++
T Consensus       181 WiNNCIG~~N~ryF~lFLL~~i~-l~~yaivrlgfi  215 (341)
T KOG1312|consen  181 WINNCIGAWNIRYFLLFLLTLIS-LATYAIVRLGFI  215 (341)
T ss_pred             eeecccccchHHHHHHHHHHHHH-HHHHHHHHHHhe
Confidence            99999999999999999999744 344444433333

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=92.87  E-value=0.44  Score=43.53  Aligned_cols=42  Identities=17%  Similarity=0.414  Sum_probs=35.6

Q ss_pred             CcccccccCceecccccccccccccccccch-----------HHHHHHHHHHH
Q 023587          160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNY-----------FLFIVLLVGFL  201 (280)
Q Consensus       160 RS~HC~~C~~CV~rfDHHCpWl~nCIG~~N~-----------r~Fi~Fl~~~~  201 (280)
                      +.|+|..|+..+.++-|||+.-|+||-+.-|           |.+-.|+.++.
T Consensus       112 ~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~  164 (299)
T KOG1311|consen  112 EWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLF  164 (299)
T ss_pred             ceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHH
Confidence            3799999999999999999999999988765           67888885554

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=92.74  E-value=0.85  Score=42.12  Aligned_cols=117  Identities=11%  Similarity=-0.062  Sum_probs=77.1

Q ss_pred             CCCCCCCCCCCCCCCCCcccccccCceecccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCC
Q 023587          144 SELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDK  223 (280)
Q Consensus       144 ~~~~~~C~~C~~~kP~RS~HC~~C~~CV~rfDHHCpWl~nCIG~~N~r~Fi~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (280)
                      .++.+.|+.|+.=....-|||.-=|+||.+..|           |=.-.|+.++....+...+....-...........+
T Consensus       120 P~RS~HC~~Cn~CV~k~DHHC~Wi~nCVG~~N~-----------r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (309)
T COG5273         120 PPRSHHCSICNRCVLKFDHHCPWINNCVGFRNY-----------RFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHDTS  188 (309)
T ss_pred             CCCCccchhhcchhhccCccCcccccccCcchH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCChH
Confidence            456789999999999999999999999998665           777888888866555444333322222211111111


Q ss_pred             CC------CCchhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhccc
Q 023587          224 SQ------SENDWVV-NLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVS  271 (280)
Q Consensus       224 ~~------~~~~~~~-~~~i~~~~~~~~~~~~~~~Ll~~h~~lI~~n~TT~E~~~  271 (280)
                      ..      ....... .+.+....+...+..+.......+.+++.++.++-|...
T Consensus       189 ~~~~~li~~~~~~~~~~f~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~  243 (309)
T COG5273         189 LAICFLIFGCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISRGGSTLEFFP  243 (309)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccceecccccc
Confidence            10      0111111 234445556667778888889999999999999999765

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=92.54  E-value=2  Score=35.48  Aligned_cols=52  Identities=12%  Similarity=0.045  Sum_probs=39.7

Q ss_pred             CCCCCCCCCCCCCCCCCcccccccCceecccccccccccccccccchHHHHHHHHHHHHHHHH
Q 023587          144 SELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEAS  206 (280)
Q Consensus       144 ~~~~~~C~~C~~~kP~RS~HC~~C~~CV~rfDHHCpWl~nCIG~~N~r~Fi~Fl~~~~~~~~~  206 (280)
                      ..+.+.|..|+.-...+-|||.--|.||.+.-|           +.+=.|+.+.....+....
T Consensus        59 p~Rs~HC~~C~~CV~~~DHHC~w~~~cIG~~N~-----------~~F~~fl~~~~~~~~~~~~  110 (174)
T PF01529_consen   59 PPRSHHCRVCNRCVLRFDHHCPWLGNCIGRRNH-----------RYFLLFLLYLCLYCLYFFI  110 (174)
T ss_pred             CCcceeccccccccccccccchhhccccccccH-----------HHHHHHHHHHHHHHHHHHH
Confidence            346778999999999999999999999998766           5566777776654444433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>PF13240 zinc_ribbon_2: zinc-ribbon domain

Probab=88.62  E-value=0.29  Score=27.18  Aligned_cols=21  Identities=14%  Similarity=0.298  Sum_probs=18.6

Q ss_pred             CCCCCCCCCCCCcccccccCc
Q 023587          149 DPDNENSLSRKRVRYCKICKA  169 (280)
Q Consensus       149 ~C~~C~~~kP~RS~HC~~C~~  169 (280)
                      +|+.|...-++.++.|+.|+.
T Consensus         1 ~Cp~CG~~~~~~~~fC~~CG~   21 (23)
T PF13240_consen    1 YCPNCGAEIEDDAKFCPNCGT   21 (23)
T ss_pred             CCcccCCCCCCcCcchhhhCC
Confidence            689999999999999999985

>PRK04136 rpl40e 50S ribosomal protein L40e; Provisional

Probab=88.03  E-value=0.26  Score=32.37  Aligned_cols=25  Identities=16%  Similarity=-0.001  Sum_probs=22.3

Q ss_pred             CCCCCCCCCCCCCCCCcccccccCc
Q 023587          145 ELGVDPDNENSLSRKRVRYCKICKA  169 (280)
Q Consensus       145 ~~~~~C~~C~~~kP~RS~HC~~C~~  169 (280)
                      .....|..|..+-|+|+..|+.|+.
T Consensus        12 ~~k~ICrkC~ARnp~~A~~CRKCg~   36 (48)
T PRK04136         12 FNKKICMRCNARNPWRATKCRKCGY   36 (48)
T ss_pred             hcccchhcccCCCCccccccccCCC
Confidence            4567899999999999999999876

>PF13248 zf-ribbon_3: zinc-ribbon domain

Probab=85.89  E-value=0.52  Score=26.83  Aligned_cols=23  Identities=17%  Similarity=0.260  Sum_probs=19.4

Q ss_pred             CCCCCCCCCCCCCCcccccccCc
Q 023587          147 GVDPDNENSLSRKRVRYCKICKA  169 (280)
Q Consensus       147 ~~~C~~C~~~kP~RS~HC~~C~~  169 (280)
                      ..+|+.|...-++.++.|+.||.
T Consensus         2 ~~~Cp~Cg~~~~~~~~fC~~CG~   24 (26)
T PF13248_consen    2 EMFCPNCGAEIDPDAKFCPNCGA   24 (26)
T ss_pred             cCCCcccCCcCCcccccChhhCC
Confidence            36799999988899999998875

>PF12773 DZR: Double zinc ribbon

Probab=80.08  E-value=1.6  Score=28.56  Aligned_cols=36  Identities=14%  Similarity=0.173  Sum_probs=25.4

Q ss_pred             CCCCCCCCCCCCCC---CCcccccccCceeccccccccc
Q 023587          145 ELGVDPDNENSLSR---KRVRYCKICKAHVEGFDHHCPA  180 (280)
Q Consensus       145 ~~~~~C~~C~~~kP---~RS~HC~~C~~CV~rfDHHCpW  180 (280)
                      ...+||..|...-+   ...+.|+.|++=+...+.+|+.
T Consensus        10 ~~~~fC~~CG~~l~~~~~~~~~C~~Cg~~~~~~~~fC~~   48 (50)
T PF12773_consen   10 DDAKFCPHCGTPLPPPDQSKKICPNCGAENPPNAKFCPN   48 (50)
T ss_pred             ccccCChhhcCChhhccCCCCCCcCCcCCCcCCcCccCc
Confidence            34577888876655   3466788888877777777764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	280
2ayj_A	56	50S ribosomal protein L40E; Zn-binding, beta-stran	84.33
3j21_g	51	50S ribosomal protein L40E; archaea, archaeal, KIN	84.15

>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7

Probab=84.33  E-value=0.41  Score=31.60  Aligned_cols=30  Identities=17%  Similarity=0.140  Sum_probs=24.7

Q ss_pred             CCCCCCCCCCCCCCCCCcccccccCceecc
Q 023587          144 SELGVDPDNENSLSRKRVRYCKICKAHVEG  173 (280)
Q Consensus       144 ~~~~~~C~~C~~~kP~RS~HC~~C~~CV~r  173 (280)
                      ......|..|..+-|+|+.-|+.|+.--+|
T Consensus        16 ~~~k~ICrkC~ARnp~~A~~CRKCg~~~LR   45 (56)
T 2ayj_A           16 VFLKKVCRKCGALNPIRATKCRRCHSTNLR   45 (56)
T ss_dssp             SCCCEEETTTCCEECTTCSSCTTTCCCCEE
T ss_pred             HhchhhhccccCcCCcccccccCCCCCCCC
Confidence            345678999999999999999999865444

>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}

Probab=84.15  E-value=0.21  Score=32.53  Aligned_cols=30  Identities=7%  Similarity=-0.121  Sum_probs=24.6

Q ss_pred             CCCCCCCCCCCCCCCCCcccccccCceecc
Q 023587          144 SELGVDPDNENSLSRKRVRYCKICKAHVEG  173 (280)
Q Consensus       144 ~~~~~~C~~C~~~kP~RS~HC~~C~~CV~r  173 (280)
                      ....+.|+.|..+.|+++..|+.||.--+|
T Consensus        11 ~~~k~iCpkC~a~~~~gaw~CrKCG~~~lr   40 (51)
T 3j21_g           11 IFKKYVCLRCGATNPWGAKKCRKCGYKRLR   40 (51)
T ss_dssp             SSSEEECTTTCCEECTTCSSCSSSSSCCCE
T ss_pred             HhCCccCCCCCCcCCCCceecCCCCCcccc
Confidence            345578999999999999999999875443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	280
d2ayja1	56	Ribosomal protein L40e {Sulfolobus solfataricus [T	89.54

>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=89.54  E-value=0.07  Score=33.50  Aligned_cols=26  Identities=19%  Similarity=0.241  Sum_probs=22.5

Q ss_pred             CCCCCCCCCCCCCCCCCcccccccCc
Q 023587          144 SELGVDPDNENSLSRKRVRYCKICKA  169 (280)
Q Consensus       144 ~~~~~~C~~C~~~kP~RS~HC~~C~~  169 (280)
                      ......|..|..+-|+|+..|+.|+.
T Consensus        16 ~~~k~ICrkC~AR~p~rAt~CRKCg~   41 (56)
T d2ayja1          16 VFLKKVCRKCGALNPIRATKCRRCHS   41 (56)
T ss_dssp             SCCCEEETTTCCEECTTCSSCTTTCC
T ss_pred             hhhhHHHhhccccCCccccccccCCC
Confidence            34567899999999999999998875