Citrus Sinensis ID: 023684

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------28
MEKGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWASVAKGHPKSATESYKRTLRQSDFDEEDYNKGLYLPDAPFLSKTVEQLISIFCEAKG
ccccEEEEEEEcccccccHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccEEcccccccccccEEEEccccccEEEEEEEcccEEcccEEEEcccccccHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccEEEEEcccccccEEEEEEEccccEEEEEEEccccccccccHHcccccccccccccccccccccccEEEEHHHHHHHHHHHcc
ccccEEEEEEEcccccccHHHHHHHHHHccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccHccEEEEEccccccEEccccccccccccEEEEEccccEEEEEEcccccEEEEEEEccccccccHHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccEEEEEcccccccEEEEEEEcccccEEEEEEEccccccccccEccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHcc
MEKGVQRWVVdiskwdptphdfsfalyllpqrhhssiIKYVKLEDRKRALVSLLLQYALVHQvlgipfeeitinrtiegkpylesdkagmdfpnfnfnvshhgdyvaiaseplclvgldivsctiplretIPEFVQNFSSYFssfewdnilnagtsdeILIEFYRYWCLKEAYVKAIGIGVAygldkvefhhtgwgnisvkidgETMTEWKFWLFELGKrhwasvakghpksatESYKRTlrqsdfdeedynkglylpdapflsKTVEQLISIFCEAKG
MEKGVQRWVVdiskwdptpHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWASvakghpksatesykrtlrqsdFDEEDYNKGLYLPDAPFLSKTVEQLISIFCEAKG
MEKGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWASVAKGHPKSATESYKRTLRQSDFDEEDYNKGLYLPDAPFLSKTVEQLISIFCEAKG
*****QRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWASVA************************YNKGLYLPDAPFLSKTVEQLISIFC****
**KGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWASVAKGHPKSATESYKRTLRQSDFDEEDYNKGLYLPDAPFLSKTVEQLISIF*****
MEKGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWA***************RTLRQSDFDEEDYNKGLYLPDAPFLSKTVEQLISIFCEAKG
**KGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWASVAKGHPKSATESYKRTLRQSDFDEEDYNKGLYLPDAPFLSKTVEQLISIFCEAK*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEKGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWASVAKGHPKSATESYKRTLRQSDFDEEDYNKGLYLPDAPFLSKTVEQLISIFCEAKG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query279 2.2.26 [Sep-21-2011]
B2RYJ4309 L-aminoadipate-semialdehy yes no 0.655 0.592 0.375 3e-32
Q9CQF6309 L-aminoadipate-semialdehy yes no 0.655 0.592 0.375 1e-31
Q9NRN7309 L-aminoadipate-semialdehy yes no 0.655 0.592 0.369 5e-31
Q5NVE1309 L-aminoadipate-semialdehy yes no 0.648 0.585 0.381 6e-31
Q6DJH2302 L-aminoadipate-semialdehy N/A no 0.802 0.741 0.323 5e-29
Q10474258 L-aminoadipate-semialdehy yes no 0.627 0.678 0.298 2e-11
P55810233 4'-phosphopantetheinyl tr no no 0.512 0.613 0.283 1e-10
P40683237 4'-phosphopantetheinyl tr N/A no 0.501 0.590 0.293 2e-09
P39135224 4'-phosphopantetheinyl tr yes no 0.673 0.839 0.248 1e-08
P50113272 L-aminoadipate-semialdehy yes no 0.620 0.636 0.3 2e-08
>sp|B2RYJ4|ADPPT_RAT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Rattus norvegicus GN=Aasdhppt PE=2 SV=1 Back     alignment and function desciption
 Score =  139 bits (349), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 104/184 (56%), Gaps = 1/184 (0%)

Query: 7   RWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGI 66
           RW      W P+P ++  A+  +       I ++V   D K AL   L+   LV + L I
Sbjct: 18  RWAFSCGTWLPSPAEWLLAVRSIQPEEKERIGQFVFARDAKAALAGRLMIRKLVAEKLNI 77

Query: 67  PFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIP 126
           P++ I + RT +GKP L  D     +PNFNFN+SH GDY  +A+EP   VG+DI+  + P
Sbjct: 78  PWDHIRLQRTSKGKPILAKDTLN-PYPNFNFNISHQGDYTVLAAEPELQVGIDIMKTSFP 136

Query: 127 LRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLD 186
            R +IPEF       F++ EW+ I +       L  FYR+W LKE+++KAIG+G+ + + 
Sbjct: 137 GRGSIPEFFHIMKRKFTNKEWETIRSFNDEWSQLDMFYRHWALKESFIKAIGVGLGFEMQ 196

Query: 187 KVEF 190
           ++EF
Sbjct: 197 RLEF 200
Catalyzes the post-translational modification of target proteins by phosphopantetheine. Can transfer the 4'-phosphopantetheine moiety from coenzyme A to a serine residue of a broad range of acceptors, such as the acyl carrier domain of FASN.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 7EC: .EC: 8EC: .EC: -
>sp|Q9CQF6|ADPPT_MOUSE L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Mus musculus GN=Aasdhppt PE=2 SV=1 Back     alignment and function description
>sp|Q9NRN7|ADPPT_HUMAN L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Homo sapiens GN=AASDHPPT PE=1 SV=2 Back     alignment and function description
>sp|Q5NVE1|ADPPT_PONAB L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Pongo abelii GN=AASDHPPT PE=2 SV=1 Back     alignment and function description
>sp|Q6DJH2|ADPPT_XENLA L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Xenopus laevis GN=aasdhppt PE=2 SV=1 Back     alignment and function description
>sp|Q10474|LYS5_SCHPO L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lys7 PE=1 SV=1 Back     alignment and function description
>sp|P55810|PSF1_BACPU 4'-phosphopantetheinyl transferase psf-1 OS=Bacillus pumilus GN=psf-1 PE=1 SV=1 Back     alignment and function description
>sp|P40683|GSP_ANEMI 4'-phosphopantetheinyl transferase gsp OS=Aneurinibacillus migulanus GN=gsp PE=3 SV=2 Back     alignment and function description
>sp|P39135|SFP_BACSU 4'-phosphopantetheinyl transferase sfp OS=Bacillus subtilis (strain 168) GN=sfp PE=1 SV=2 Back     alignment and function description
>sp|P50113|LYS5_YEAST L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LYS5 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query279
224110170281 predicted protein [Populus trichocarpa] 0.978 0.971 0.688 1e-118
255568044 405 aminoadipate-semialdehyde dehydrogenase, 0.971 0.669 0.701 1e-115
225450250314 PREDICTED: L-aminoadipate-semialdehyde d 0.992 0.882 0.703 1e-112
296080991300 unnamed protein product [Vitis vinifera] 0.992 0.923 0.703 1e-112
356555754281 PREDICTED: L-aminoadipate-semialdehyde d 0.992 0.985 0.672 1e-105
356500323280 PREDICTED: L-aminoadipate-semialdehyde d 0.992 0.989 0.664 1e-105
449434500276 PREDICTED: L-aminoadipate-semialdehyde d 0.971 0.981 0.656 1e-103
147815042295 hypothetical protein VITISV_042751 [Viti 0.842 0.796 0.599 2e-85
115484057283 Os11g0136500 [Oryza sativa Japonica Grou 0.949 0.936 0.546 2e-84
413924804276 hypothetical protein ZEAMMB73_017831 [Ze 0.956 0.967 0.565 4e-84
>gi|224110170|ref|XP_002315436.1| predicted protein [Populus trichocarpa] gi|222864476|gb|EEF01607.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 188/273 (68%), Positives = 239/273 (87%)

Query: 1   MEKGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALV 60
           MEKGV+RW+VD SKW+PTPHDFS AL++LPQ   SSI +++++EDRK+ALVS LLQYAL+
Sbjct: 1   MEKGVKRWLVDTSKWNPTPHDFSSALFVLPQHERSSITRFLRMEDRKQALVSRLLQYALI 60

Query: 61  HQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDI 120
           H+VLGIP+ EI I RT EGKPYLE  K G++FPNFNFNVSHHGD+VAIASEPLCLVG+D+
Sbjct: 61  HEVLGIPYNEIVIKRTFEGKPYLECSKVGVEFPNFNFNVSHHGDHVAIASEPLCLVGVDV 120

Query: 121 VSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIG 180
           V C  P +E++PEF++NFSSYFSS EWDNI+N GTSDEIL++FYRYWCLKEA+VKA+G G
Sbjct: 121 VCCIKPEKESVPEFIENFSSYFSSLEWDNIINTGTSDEILVDFYRYWCLKEAFVKAVGSG 180

Query: 181 VAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWASVAKGHPKSATESYKRT 240
           VAYG+DKVEFHHT W NISVK+DGE +TEW+FWLF+L +RHW +VA+GHP+ ATE+YKRT
Sbjct: 181 VAYGVDKVEFHHTNWTNISVKVDGEPLTEWRFWLFKLPERHWVAVARGHPRFATENYKRT 240

Query: 241 LRQSDFDEEDYNKGLYLPDAPFLSKTVEQLISI 273
           + +++FD E+Y+KGL LP+  F+++ +EQLI +
Sbjct: 241 ISKAEFDAEEYHKGLNLPNVAFVTRIIEQLIPV 273

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255568044|ref|XP_002524999.1| aminoadipate-semialdehyde dehydrogenase, putative [Ricinus communis] gi|223535743|gb|EEF37406.1| aminoadipate-semialdehyde dehydrogenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225450250|ref|XP_002268769.1| PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Vitis vinifera] Back     alignment and taxonomy information
>gi|296080991|emb|CBI18589.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356555754|ref|XP_003546195.1| PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like [Glycine max] Back     alignment and taxonomy information
>gi|356500323|ref|XP_003518982.1| PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like [Glycine max] Back     alignment and taxonomy information
>gi|449434500|ref|XP_004135034.1| PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like [Cucumis sativus] gi|449512793|ref|XP_004164141.1| PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147815042|emb|CAN76894.1| hypothetical protein VITISV_042751 [Vitis vinifera] Back     alignment and taxonomy information
>gi|115484057|ref|NP_001065690.1| Os11g0136500 [Oryza sativa Japonica Group] gi|113644394|dbj|BAF27535.1| Os11g0136500 [Oryza sativa Japonica Group] gi|222615477|gb|EEE51609.1| hypothetical protein OsJ_32874 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|413924804|gb|AFW64736.1| hypothetical protein ZEAMMB73_017831 [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query279
RGD|1311360309 Aasdhppt "aminoadipate-semiald 0.810 0.731 0.347 3.6e-34
MGI|MGI:1914868309 Aasdhppt "aminoadipate-semiald 0.810 0.731 0.347 7.4e-34
UNIPROTKB|Q5NVE1309 AASDHPPT "L-aminoadipate-semia 0.802 0.724 0.352 3.2e-33
UNIPROTKB|F1SV35306 AASDHPPT "Uncharacterized prot 0.820 0.748 0.343 5.2e-33
UNIPROTKB|Q9NRN7309 AASDHPPT "L-aminoadipate-semia 0.810 0.731 0.343 6.7e-33
UNIPROTKB|F1PHM4296 AASDHPPT "Uncharacterized prot 0.827 0.780 0.336 8.5e-33
UNIPROTKB|F1MS62309 AASDHPPT "Uncharacterized prot 0.820 0.741 0.338 6e-32
UNIPROTKB|F1P0E9306 AASDHPPT "Uncharacterized prot 0.795 0.725 0.329 1.3e-31
UNIPROTKB|G3MZI2308 G3MZI2 "Uncharacterized protei 0.820 0.743 0.338 1.6e-31
ZFIN|ZDB-GENE-050913-36293 aasdhppt "aminoadipate-semiald 0.799 0.761 0.331 1e-29
RGD|1311360 Aasdhppt "aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
 Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
 Identities = 82/236 (34%), Positives = 127/236 (53%)

Query:     3 KGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQ 62
             +GV RW      W P+P ++  A+  +       I ++V   D K AL   L+   LV +
Sbjct:    15 EGV-RWAFSCGTWLPSPAEWLLAVRSIQPEEKERIGQFVFARDAKAALAGRLMIRKLVAE 73

Query:    63 VLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVS 122
              L IP++ I + RT +GKP L  D     +PNFNFN+SH GDY  +A+EP   VG+DI+ 
Sbjct:    74 KLNIPWDHIRLQRTSKGKPILAKDTLN-PYPNFNFNISHQGDYTVLAAEPELQVGIDIMK 132

Query:   123 CTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVA 182
              + P R +IPEF       F++ EW+ I +       L  FYR+W LKE+++KAIG+G+ 
Sbjct:   133 TSFPGRGSIPEFFHIMKRKFTNKEWETIRSFNDEWSQLDMFYRHWALKESFIKAIGVGLG 192

Query:   183 YGLDKVEFHHTGW----GNISVK----IDGETMTEWKFWLFELGKRHWASVAKGHP 230
             + + ++EF  +      G +  +    +DGE   EW F   ++ + H+ +VA   P
Sbjct:   193 FEMQRLEFDVSPLSMDIGQVYKETRLILDGEEEKEWAFEESKIDQHHFVAVALRKP 248
GO:0000287 "magnesium ion binding" evidence=IEA;ISO;ISS
GO:0005737 "cytoplasm" evidence=IEA
GO:0008897 "holo-[acyl-carrier-protein
GO:0009059 "macromolecule biosynthetic process" evidence=IEA
MGI|MGI:1914868 Aasdhppt "aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q5NVE1 AASDHPPT "L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms
UNIPROTKB|F1SV35 AASDHPPT "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NRN7 AASDHPPT "L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PHM4 AASDHPPT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1MS62 AASDHPPT "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1P0E9 AASDHPPT "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|G3MZI2 G3MZI2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050913-36 aasdhppt "aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.8LOW CONFIDENCE prediction!
4th Layer2.7.8.7LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_X002292
hypothetical protein (281 aa)
(Populus trichocarpa)
Predicted Functional Partners:
fgenesh4_pm.C_LG_X000827
dephospho-CoA kinase (EC-2.7.1.24) (232 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query279
COG2091223 COG2091, Sfp, Phosphopantetheinyl transferase [Coe 1e-23
pfam01648108 pfam01648, ACPS, 4'-phosphopantetheinyl transferas 2e-12
pfam1351082 pfam13510, Fer2_4, 2Fe-2S iron-sulfur cluster bind 0.004
>gnl|CDD|225002 COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism] Back     alignment and domain information 
 Score = 95.5 bits (238), Expect = 1e-23
 Identities = 60/191 (31%), Positives = 77/191 (40%), Gaps = 21/191 (10%)

Query: 3   KGVQRWVVDISKWDPTPHDFSFALYLLPQRHHS---SIIKYVKLEDRKRALVSLLLQYAL 59
                +VV I        D       LP           +Y    DR+R L S LL  AL
Sbjct: 1   MMATVFVVGI------QSDRPLIERRLPSLLSEEARRGPRYRNKRDRERFLASRLLLRAL 54

Query: 60  VHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLD 119
           +   LG+  E + I+    GKPYL       D    +FN+SH GDYVA+A      +G+D
Sbjct: 55  LSIALGLDPELLQISYGERGKPYLP------DENLLDFNISHSGDYVAVALSKEGEIGVD 108

Query: 120 IVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGI 179
           I       R         F   F   E   +      D+    FYR W LKEA +KA G 
Sbjct: 109 IEKIR--PRAGWRSLAARFFHPFEPNELAWL----DKDQDNEAFYRLWTLKEAVLKATGK 162

Query: 180 GVAYGLDKVEF 190
           G+A GL  V+ 
Sbjct: 163 GLADGLSSVDL 173

Length = 223
>gnl|CDD|216625 pfam01648, ACPS, 4'-phosphopantetheinyl transferase superfamily Back     alignment and domain information
>gnl|CDD|205688 pfam13510, Fer2_4, 2Fe-2S iron-sulfur cluster binding domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 279
KOG0945289 consensus Alpha-aminoadipic semialdehyde dehydroge 100.0
COG2091223 Sfp Phosphopantetheinyl transferase [Coenzyme meta 100.0
PRK10351187 holo-(acyl carrier protein) synthase 2; Provisiona 99.97
PRK10251207 phosphopantetheinyltransferase component of entero 99.89
PRK14659122 acpS 4'-phosphopantetheinyl transferase; Provision 99.64
PF01648115 ACPS: 4'-phosphopantetheinyl transferase superfami 99.62
PRK14656126 acpS 4'-phosphopantetheinyl transferase; Provision 99.5
TIGR00556128 pantethn_trn phosphopantethiene--protein transfera 99.44
COG2977228 EntD Phosphopantetheinyl transferase component of 99.43
PRK14657123 acpS 4'-phosphopantetheinyl transferase; Provision 99.41
PRK14660125 acpS 4'-phosphopantetheinyl transferase; Provision 99.41
PRK14661169 acpS 4'-phosphopantetheinyl transferase; Provision 99.39
TIGR00516121 acpS holo-[acyl-carrier-protein] synthase. Formerl 99.36
PRK14658115 acpS 4'-phosphopantetheinyl transferase; Provision 99.32
PRK00070126 acpS 4'-phosphopantetheinyl transferase; Provision 99.29
COG0736127 AcpS Phosphopantetheinyl transferase (holo-ACP syn 99.29
PRK14663116 acpS 4'-phosphopantetheinyl transferase; Provision 99.17
PRK14662120 acpS 4'-phosphopantetheinyl transferase; Provision 99.16
PRK00070126 acpS 4'-phosphopantetheinyl transferase; Provision 99.0
PRK14658115 acpS 4'-phosphopantetheinyl transferase; Provision 98.88
PRK14659122 acpS 4'-phosphopantetheinyl transferase; Provision 98.63
PRK14660125 acpS 4'-phosphopantetheinyl transferase; Provision 98.6
COG0736127 AcpS Phosphopantetheinyl transferase (holo-ACP syn 98.59
TIGR00516121 acpS holo-[acyl-carrier-protein] synthase. Formerl 98.58
PRK14663116 acpS 4'-phosphopantetheinyl transferase; Provision 98.48
PRK14662120 acpS 4'-phosphopantetheinyl transferase; Provision 98.41
PRK14657123 acpS 4'-phosphopantetheinyl transferase; Provision 98.33
PRK14656126 acpS 4'-phosphopantetheinyl transferase; Provision 98.26
PRK14661169 acpS 4'-phosphopantetheinyl transferase; Provision 97.92
TIGR00556128 pantethn_trn phosphopantethiene--protein transfera 97.56
PF01648115 ACPS: 4'-phosphopantetheinyl transferase superfami 96.69
PF1398647 DUF4224: Domain of unknown function (DUF4224) 81.86
>KOG0945 consensus Alpha-aminoadipic semialdehyde dehydrogenase-phosphopantetheinyl transferase [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.7e-46  Score=328.43  Aligned_cols=226  Identities=30%  Similarity=0.462  Sum_probs=200.3

Q ss_pred             eEEEEEECCCCCCChhcHHHHhcCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhCCCCCCeeEccCCCCCcEEe
Q 023684            5 VQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLE   84 (279)
Q Consensus         5 ~~~w~~d~~~w~~~~~~~~~~~~~L~~~E~~~~~r~~~~~dr~~~L~~R~l~r~~l~~~~g~~~~~i~~~~~~~GKP~l~   84 (279)
                      .+.|++.+.+|.++.+.|..+...||++|++++.+|++.+|++.+|+||+|+|.+++.++|++|++++|.++.+|||++.
T Consensus        17 ~~~wAf~~~~~e~s~a~f~~a~~~ls~se~erI~qfr~~~DakaaL~grLl~R~~~a~~~~~~~n~l~f~rt~~GKP~l~   96 (289)
T KOG0945|consen   17 SLQWAFVVPDFEKSLALFRHAVQSLSPSEKERILQFRFDEDAKAALAGRLLVRHLVAIYLGVPWNELRFSRTEYGKPVLW   96 (289)
T ss_pred             hhhhheecchhhhhHHHHHHHHHhCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCChhHeEeecccCCCcchh
Confidence            46899999999888889999999999999999999999999999999999999999999999999999999999999666


Q ss_pred             cCCCCCCCCceeEeeccCCCeEEEEecCCccccccccccccccCCChhHHHHHHhccCCHHHHHHHHhcCCchHHHHHHH
Q 023684           85 SDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFY  164 (279)
Q Consensus        85 ~~~~~~~~~~~~fniSHs~~~v~~a~~~~~~VGVDIe~~~~~~~~~~~~~~~~~~~~ft~~E~~~i~~~~~~~~~~~~f~  164 (279)
                      +.......++++|||||+|++++||+....+||||||....+  .+.++++.+|+++||+.|++.|++..++..+...||
T Consensus        97 qn~~~p~~~~f~fNvSH~gd~iv~at~~~~~VGIDIm~~~~r--~~~~e~l~~~kr~fS~~E~k~l~s~~~e~~~~~~Fy  174 (289)
T KOG0945|consen   97 QNYSNPFSPTFGFNVSHQGDLIVVATTVHVPVGIDIMRPKER--KTAHEELELFKRVFSEDEWKMLKSAPDEEVQRTMFY  174 (289)
T ss_pred             hcccCCCCCCccceeeeeceEEEEeccCCcccceeeeecccc--cchHHHHHHHHHhcCHHHHHHHHcCCChhhHHHHHH
Confidence            543333468999999999999999999889999999999633  456899999999999999999998877788899999


Q ss_pred             HHHHHHHhhHhhccccCCCCCCeEEEEecCC----Cc----eEEEecCCccccEEEEEEecCCCeEEEEEeCCCCC
Q 023684          165 RYWCLKEAYVKAIGIGVAYGLDKVEFHHTGW----GN----ISVKIDGETMTEWKFWLFELGKRHWASVAKGHPKS  232 (279)
Q Consensus       165 ~~WtlKEA~~Ka~G~GL~~~l~~~~~~~~~~----~~----~~l~~~g~~~~~w~~~~~~~~~~y~~ava~~~~~~  232 (279)
                      ++|||||||+||+|+||..+|+.++|....-    ++    .....+|....+|.++...+++.|.+|||...++.
T Consensus       175 rlWtLKEa~lKAtGvGl~~~L~~~~F~~~p~~~~~g~s~~~T~~~~~g~~~~qw~feE~~i~~~h~vav~~~k~d~  250 (289)
T KOG0945|consen  175 RLWTLKEAILKATGVGLNTDLSLLDFSANPFNTATGQSKVETLDEVDGIFQSQWNFEESFIDEAHSVAVCMEKSDS  250 (289)
T ss_pred             HHHHHHHHHHHHhcCCcccccccccccccccccccceeeeeeeeccCCccchhhhhhhhhccccceeEEeccCCCc
Confidence            9999999999999999999999999876531    11    12345887788999999999999999999987764

>COG2091 Sfp Phosphopantetheinyl transferase [Coenzyme metabolism] Back     alignment and domain information
>PRK10351 holo-(acyl carrier protein) synthase 2; Provisional Back     alignment and domain information
>PRK10251 phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex; Provisional Back     alignment and domain information
>PRK14659 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PF01648 ACPS: 4'-phosphopantetheinyl transferase superfamily; InterPro: IPR008278 These proteins transfer the 4'-phosphopantetheine (4'-PP) moiety from coenzyme A (CoA) to the invariant serine of pp-binding Back     alignment and domain information
>PRK14656 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>TIGR00556 pantethn_trn phosphopantethiene--protein transferase domain Back     alignment and domain information
>COG2977 EntD Phosphopantetheinyl transferase component of siderophore synthetase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK14657 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14660 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14661 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>TIGR00516 acpS holo-[acyl-carrier-protein] synthase Back     alignment and domain information
>PRK14658 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK00070 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>COG0736 AcpS Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism] Back     alignment and domain information
>PRK14663 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14662 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK00070 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14658 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14659 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14660 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>COG0736 AcpS Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism] Back     alignment and domain information
>TIGR00516 acpS holo-[acyl-carrier-protein] synthase Back     alignment and domain information
>PRK14663 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14662 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14657 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14656 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14661 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>TIGR00556 pantethn_trn phosphopantethiene--protein transferase domain Back     alignment and domain information
>PF01648 ACPS: 4'-phosphopantetheinyl transferase superfamily; InterPro: IPR008278 These proteins transfer the 4'-phosphopantetheine (4'-PP) moiety from coenzyme A (CoA) to the invariant serine of pp-binding Back     alignment and domain information
>PF13986 DUF4224: Domain of unknown function (DUF4224) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query279
2byd_A323 Structure Of Aminoadipate-semialdehyde Dehydrogenas 3e-32
2cg5_A319 Structure Of Aminoadipate-Semialdehyde Dehydrogenas 3e-32
1qr0_A228 Crystal Structure Of The 4'-Phosphopantetheinyl Tra 8e-10
>pdb|2BYD|A Chain A, Structure Of Aminoadipate-semialdehyde Dehydrogenase- Phosphopantetheinyl Transferase Length = 323 Back     alignment and structure 
Iteration: 1

 Score =  135 bits (340), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 1/184 (0%)
Query: 7   RWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGI 66
           RW      W P+  ++  A+  +       I ++V   D K A+   L+   LV + L I
Sbjct: 28  RWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAEKLNI 87
Query: 67  PFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIP 126
           P+  I + RT +GKP L  D +   +PNFNFN+SH GDY  +A+EP   VG+DI+  + P
Sbjct: 88  PWNHIRLQRTAKGKPVLAKDSSN-PYPNFNFNISHQGDYAVLAAEPELQVGIDIMKTSFP 146
Query: 127 LRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLD 186
            R +IPEF       F++ EW+ I +       L  FYR W LKE+++KAIG+G+ + L 
Sbjct: 147 GRGSIPEFFHIMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALKESFIKAIGVGLGFELQ 206
Query: 187 KVEF 190
           ++EF
Sbjct: 207 RLEF 210
>pdb|2CG5|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase- Phosphopantetheinyl Transferase In Complex With Cytosolic Acyl Carrier Protein And Coenzyme A Length = 319 Back     alignment and structure
>pdb|1QR0|A Chain A, Crystal Structure Of The 4'-Phosphopantetheinyl Transferase Sfp- Coenzyme A Complex Length = 228 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query279
2c43_A323 Aminoadipate-semialdehyde dehydrogenase- phosphopa 4e-65
1qr0_A228 4'-phosphopantetheinyl transferase SFP; protein-co 5e-47
>2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A* Length = 323 Back     alignment and structure
 Score =  205 bits (523), Expect = 4e-65
 Identities = 78/253 (30%), Positives = 126/253 (49%), Gaps = 9/253 (3%)

Query: 7   RWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGI 66
           RW      W P+  ++  A+  +       I ++V   D K A+   L+   LV + L I
Sbjct: 28  RWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAEKLNI 87

Query: 67  PFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIP 126
           P+  I + RT +GKP L +  +   +PNFNFN+SH GDY  +A+EP   VG+DI+  + P
Sbjct: 88  PWNHIRLQRTAKGKPVL-AKDSSNPYPNFNFNISHQGDYAVLAAEPELQVGIDIMKTSFP 146

Query: 127 LRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLD 186
            R +IPEF       F++ EW+ I +       L  FYR W LKE+++KAIG+G+ + L 
Sbjct: 147 GRGSIPEFFHIMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALKESFIKAIGVGLGFELQ 206

Query: 187 KVEFHHT--------GWGNISVKIDGETMTEWKFWLFELGKRHWASVAKGHPKSATESYK 238
           ++EF  +         +    + +DGE   EW F   ++ + H+ +VA   P  +     
Sbjct: 207 RLEFDLSPLNLDIGQVYKETRLFLDGEEEKEWAFEESKIDEHHFVAVALRKPDGSRHQDV 266

Query: 239 RTLRQSDFDEEDY 251
            +   S   +  +
Sbjct: 267 PSQDDSKPTQRQF 279
>1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1 Length = 228 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query279
2c43_A323 Aminoadipate-semialdehyde dehydrogenase- phosphopa 100.0
1qr0_A228 4'-phosphopantetheinyl transferase SFP; protein-co 100.0
3f09_A143 Holo-[acyl-carrier-protein] synthase; structural g 99.77
1fth_A122 ACPS, acyl carrier protein synthase; bacterial fat 99.67
1f7l_A121 Holo-(acyl carrier protein) synthase; 9-strand pse 99.62
2was_A122 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FA 99.59
3hyk_A122 Holo-[acyl-carrier-protein] synthase; structural g 99.59
3h88_A129 Holo-[acyl-carrier-protein] synthase; alpha-beta s 99.55
2wds_A143 Holo-[acyl-carrier-protein] synthase; phosphopante 99.46
3gwm_A129 Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 99.46
2bdd_A182 ACP-synthase; structural genomics, structural geno 99.46
2qg8_A163 Acyl carrier protein synthase PY06285; malaria, 3' 99.46
3ota_A129 Holo-[acyl-carrier-protein] synthase; structural g 99.37
3nfd_A153 Phosphopantetheine protein transferase, PPT1P; acy 99.32
1f7l_A121 Holo-(acyl carrier protein) synthase; 9-strand pse 99.2
3f09_A143 Holo-[acyl-carrier-protein] synthase; structural g 99.08
3hyk_A122 Holo-[acyl-carrier-protein] synthase; structural g 98.85
1fth_A122 ACPS, acyl carrier protein synthase; bacterial fat 98.78
3ota_A129 Holo-[acyl-carrier-protein] synthase; structural g 98.72
3h88_A129 Holo-[acyl-carrier-protein] synthase; alpha-beta s 98.7
3gwm_A129 Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 98.68
2was_A122 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FA 98.65
2uv9_A1878 Fatty acid synthase alpha subunits; fungal, dehydr 98.52
2qg8_A163 Acyl carrier protein synthase PY06285; malaria, 3' 98.48
3nfd_A153 Phosphopantetheine protein transferase, PPT1P; acy 98.46
2bdd_A182 ACP-synthase; structural genomics, structural geno 98.44
2wds_A143 Holo-[acyl-carrier-protein] synthase; phosphopante 98.31
2uv8_A1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 98.26
1qr0_A228 4'-phosphopantetheinyl transferase SFP; protein-co 97.68
2uv8_A1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 97.14
2uv9_A1878 Fatty acid synthase alpha subunits; fungal, dehydr 96.85
2c43_A323 Aminoadipate-semialdehyde dehydrogenase- phosphopa 95.96
>2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A* Back     alignment and structure
Probab=100.00  E-value=1.1e-48  Score=361.12  Aligned_cols=263  Identities=31%  Similarity=0.561  Sum_probs=215.9

Q ss_pred             CCCceEEEEEECCCCCCChhcHHHHhcCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhCCCCCCeeEccCCCCC
Q 023684            1 MEKGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGK   80 (279)
Q Consensus         1 ~~~~~~~w~~d~~~w~~~~~~~~~~~~~L~~~E~~~~~r~~~~~dr~~~L~~R~l~r~~l~~~~g~~~~~i~~~~~~~GK   80 (279)
                      |.....+|++|++.|.|+..++..+.++|+++|++++.+|++.++|.++|+||+++|.++++++|+++.+|.|.++++||
T Consensus        22 ~~~~~~rw~~~~~~W~~~~~~~~~~~~~Ls~~E~~r~~r~~~~~~r~~~LagR~l~r~al~~~lg~~~~~i~i~~~~~GK  101 (323)
T 2c43_A           22 GHMEGVRWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAEKLNIPWNHIRLQRTAKGK  101 (323)
T ss_dssp             CCCCCEEEEECGGGCCCCHHHHHHHHHTSCHHHHHHHHTCSBHHHHHHHHHHHHHHHHHHHHHSCCCGGGCCEEECTTSC
T ss_pred             ccCCceEEEEEcCCCCCCHHHHHHHHccCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHCcCHHHeeEeeCCCCC
Confidence            77788899999999999998888999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEecCCCCCCCCceeEeeccCCCeEEEEecCCccccccccccccccCCChhHHHHHHhccCCHHHHHHHHhcCCchHHH
Q 023684           81 PYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEIL  160 (279)
Q Consensus        81 P~l~~~~~~~~~~~~~fniSHs~~~v~~a~~~~~~VGVDIe~~~~~~~~~~~~~~~~~~~~ft~~E~~~i~~~~~~~~~~  160 (279)
                      |++.++... ..++++||||||+++++||++...+||||||.+.+.....+.++.++++++||+.|++++....++.++.
T Consensus       102 P~l~~~~~~-~~~~~~fSISHs~~~av~avs~~~~VGIDIE~i~~~~~~~~~~~~~~~~r~ft~~E~~~l~~~~~~~~~~  180 (323)
T 2c43_A          102 PVLAKDSSN-PYPNFNFNISHQGDYAVLAAEPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRSFKDEWTQL  180 (323)
T ss_dssp             EEECCC--C-CSSSCEEEEEEETTEEEEEEESSSEEEEEEEECCCCSSSCHHHHHHHTGGGSCHHHHHHHTTSSSHHHHH
T ss_pred             ceeeCCccC-CCCCceEEEEEeCCceeeeecCCCCceeeeEEeechhhhhhhhHHHHHHHhCCHHHHHHHHcCCChhHHH
Confidence            999873210 1357999999999999999998789999999998653345667888999999999999997654444678


Q ss_pred             HHHHHHHHHHHhhHhhccccCCCCCCeEEEEecC----CCc----eEEEecCCccccEEEEEEecCCCeEEEEEeCCCCC
Q 023684          161 IEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTG----WGN----ISVKIDGETMTEWKFWLFELGKRHWASVAKGHPKS  232 (279)
Q Consensus       161 ~~f~~~WtlKEA~~Ka~G~GL~~~l~~~~~~~~~----~~~----~~l~~~g~~~~~w~~~~~~~~~~y~~ava~~~~~~  232 (279)
                      ..|+++||+||||+||+|.||+.++++++|...+    .+.    ..+.++|....+|++..+.++++|++|||+..++.
T Consensus       181 ~~f~~~WtaKEA~~KA~G~Gl~~~l~~iev~~~p~~~~~g~p~~~~~v~l~g~~~~~w~~~~~~~~~~y~~Ava~~~~~~  260 (323)
T 2c43_A          181 DMFYRNWALKESFIKAIGVGLGFELQRLEFDLSPLNLDIGQVYKETRLFLDGEEEKEWAFEESKIDEHHFVAVALRKPDG  260 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCSCCCGGGEEEECCSSCCCTTCCBCCCEEEETTEECTTEEEEEEEEETTEEEEEEEECC--
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCeEEEEeCccccccCCceecceeeecCCCCCCeEEEEEecCCCcEEEEEEEcCCc
Confidence            8999999999999999999999999999998762    221    24567887677899999999999999999998875


Q ss_pred             cchhhhhhccccccchhhhccCCCCCCCCceeecHHHHHHHHHH
Q 023684          233 ATESYKRTLRQSDFDEEDYNKGLYLPDAPFLSKTVEQLISIFCE  276 (279)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~  276 (279)
                      ..           +....++..+..|.++|+.|||+||| .+|+
T Consensus       261 ~~-----------~~~~~~~~~~~~~~~~f~~l~~~~l~-~~a~  292 (323)
T 2c43_A          261 SR-----------HQDVPSQDDSKPTQRQFTILNFNDLM-SSAV  292 (323)
T ss_dssp             -------------------------CCCCCEEECHHHHT-TTCC
T ss_pred             cc-----------ccccccccccccCCCCeEEeeHHHHH-hhcC
Confidence            32           22334556777889999999999999 4443
>1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1 Back     alignment and structure
>1fth_A ACPS, acyl carrier protein synthase; bacterial fatty acid biosynthesis, acyl carrier synthase, coenzyme A, X-RAY crystallography; HET: A3P; 1.90A {Streptococcus pneumoniae} SCOP: d.150.1.2 PDB: 1fte_A 1ftf_A* Back     alignment and structure
>1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A* Back     alignment and structure
>2was_A 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FAS, PPT, NAD, NADP, transferase, phosphoprotein, oxidoreductase, lipid synthesis; 1.90A {Saccharomyces cerevisiae} PDB: 2wat_A* 2was_B Back     alignment and structure
>3hyk_A Holo-[acyl-carrier-protein] synthase; structural genomics, I diseases; HET: MSE A3P; 2.31A {Bacillus anthracis} SCOP: d.150.1.0 Back     alignment and structure
>2wds_A Holo-[acyl-carrier-protein] synthase; phosphopantetheine ARM, fatty acid biosynthesis, lipid synthesis, transferase, polyketides; HET: COA; 1.35A {Streptomyces coelicolor} PDB: 2wdo_A* 2jca_A 2jbz_A* 2wdy_A* Back     alignment and structure
>3gwm_A Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 9-stand pseudo beta barrel protein, cytoplasm, fatty acid biosynthesis; 1.70A {Mycobacterium smegmatis} PDB: 3h7q_A* 3ne3_B 3ne1_A 3hqj_A* 4hc6_A Back     alignment and structure
>2bdd_A ACP-synthase; structural genomics, structural genomics conso SGC, transferase; 2.28A {Plasmodium yoelii yoelii} Back     alignment and structure
>2qg8_A Acyl carrier protein synthase PY06285; malaria, 3'5'ADP, SG structural genomics consortium, transferase; HET: A3P; 2.00A {Plasmodium yoelii yoelii} Back     alignment and structure
>3nfd_A Phosphopantetheine protein transferase, PPT1P; acyl carrier protein synthase, mycobacterium tuberculosis, A carrier protein; HET: COA; 1.89A {Corynebacterium ammoniagenes} PDB: 3ne9_A* Back     alignment and structure
>1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A* Back     alignment and structure
>3hyk_A Holo-[acyl-carrier-protein] synthase; structural genomics, I diseases; HET: MSE A3P; 2.31A {Bacillus anthracis} SCOP: d.150.1.0 Back     alignment and structure
>1fth_A ACPS, acyl carrier protein synthase; bacterial fatty acid biosynthesis, acyl carrier synthase, coenzyme A, X-RAY crystallography; HET: A3P; 1.90A {Streptococcus pneumoniae} SCOP: d.150.1.2 PDB: 1fte_A 1ftf_A* Back     alignment and structure
>3gwm_A Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 9-stand pseudo beta barrel protein, cytoplasm, fatty acid biosynthesis; 1.70A {Mycobacterium smegmatis} PDB: 3h7q_A* 3ne3_B 3ne1_A 3hqj_A* 4hc6_A Back     alignment and structure
>2was_A 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FAS, PPT, NAD, NADP, transferase, phosphoprotein, oxidoreductase, lipid synthesis; 1.90A {Saccharomyces cerevisiae} PDB: 2wat_A* 2was_B Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>2qg8_A Acyl carrier protein synthase PY06285; malaria, 3'5'ADP, SG structural genomics consortium, transferase; HET: A3P; 2.00A {Plasmodium yoelii yoelii} Back     alignment and structure
>3nfd_A Phosphopantetheine protein transferase, PPT1P; acyl carrier protein synthase, mycobacterium tuberculosis, A carrier protein; HET: COA; 1.89A {Corynebacterium ammoniagenes} PDB: 3ne9_A* Back     alignment and structure
>2bdd_A ACP-synthase; structural genomics, structural genomics conso SGC, transferase; 2.28A {Plasmodium yoelii yoelii} Back     alignment and structure
>2wds_A Holo-[acyl-carrier-protein] synthase; phosphopantetheine ARM, fatty acid biosynthesis, lipid synthesis, transferase, polyketides; HET: COA; 1.35A {Streptomyces coelicolor} PDB: 2wdo_A* 2jca_A 2jbz_A* 2wdy_A* Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1 Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 279
d1qr0a1101 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transfe 6e-17
d1qr0a2127 d.150.1.1 (A:102-228) 4'-Phosphopantetheinyl trans 5e-16
>d1qr0a1 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} Length = 101 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: 4'-phosphopantetheinyl transferase
superfamily: 4'-phosphopantetheinyl transferase
family: 4'-Phosphopantetheinyl transferase SFP
domain: 4'-Phosphopantetheinyl transferase SFP
species: Bacillus subtilis [TaxId: 1423]

 Score = 72.2 bits (177), Expect = 6e-17
 Identities = 17/102 (16%), Positives = 41/102 (40%), Gaps = 7/102 (6%)

Query: 8   WVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIP 67
           + + + +   +  +    +  +         ++   ED  R L+  +L  +++ +   + 
Sbjct: 4   YGIYMDR-PLSQEENERFMTFISPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQYQLD 62

Query: 68  FEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIA 109
             +I  +    GKP +         P+ +FN+SH G +V  A
Sbjct: 63  KSDIRFSTQEYGKPCIPDL------PDAHFNISHSGRWVIGA 98
>d1qr0a2 d.150.1.1 (A:102-228) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} Length = 127 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query279
d1qr0a2127 4'-Phosphopantetheinyl transferase SFP {Bacillus s 99.93
d1qr0a1101 4'-Phosphopantetheinyl transferase SFP {Bacillus s 99.92
d1ftha_117 Holo-(acyl carrier protein) synthase ACPS {Strepto 99.47
d1f7la_118 Holo-(acyl carrier protein) synthase ACPS {Bacillu 99.42
d1ftha_117 Holo-(acyl carrier protein) synthase ACPS {Strepto 98.95
d1f7la_118 Holo-(acyl carrier protein) synthase ACPS {Bacillu 98.85
d1qr0a2127 4'-Phosphopantetheinyl transferase SFP {Bacillus s 96.59
d1qr0a1101 4'-Phosphopantetheinyl transferase SFP {Bacillus s 80.44
>d1qr0a2 d.150.1.1 (A:102-228) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: 4'-phosphopantetheinyl transferase
superfamily: 4'-phosphopantetheinyl transferase
family: 4'-Phosphopantetheinyl transferase SFP
domain: 4'-Phosphopantetheinyl transferase SFP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.93  E-value=1.3e-25  Score=178.30  Aligned_cols=124  Identities=22%  Similarity=0.362  Sum_probs=103.5

Q ss_pred             ccccccccccccccCCChhHHHHHHhccCCHHHHHHHHhcCCchHHHHHHHHHHHHHHhhHhhccccCCCCCCeEEEEec
Q 023684          114 CLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHT  193 (279)
Q Consensus       114 ~~VGVDIe~~~~~~~~~~~~~~~~~~~~ft~~E~~~i~~~~~~~~~~~~f~~~WtlKEA~~Ka~G~GL~~~l~~~~~~~~  193 (279)
                      .|||||||++++..       .++++++||+.|++.|.. .+++++...|+++||+||||+||+|.||+.+|++++|...
T Consensus         1 ~PVGIDIE~i~~~~-------~~~~~~~fs~~E~~~l~~-~~~~~~~~~F~~~Wt~KEA~~Ka~G~GL~~~l~~~~~~~~   72 (127)
T d1qr0a2           1 QPIGIDIEKTKPIS-------LEIAKRFFSKTEYSDLLA-KDKDEQTDYFYHLWSMKESFIKQEGKGLSLPLDSFSVRLH   72 (127)
T ss_dssp             SCCEEEEEECCCCC-------HHHHSSSSCHHHHHHHHH-SCHHHHHHHHHHHHHHHHHHHHHHCSTTSCCSSCCEEEEC
T ss_pred             CCeeEEEEEecccH-------HHHHHHhCCHHHHHHHHH-CChhHHHHHHHHHHHHhHHHHHHhCCCcCCCCceEEEEeC
Confidence            38999999987421       368899999999999976 4677788999999999999999999999999999999987


Q ss_pred             CCCceEEEecCCccccEEEEEEecCCCeEEEEEeCCCCCcchhhhhhccccccchhhhccCCCCCCCCceeecHHHHHH
Q 023684          194 GWGNISVKIDGETMTEWKFWLFELGKRHWASVAKGHPKSATESYKRTLRQSDFDEEDYNKGLYLPDAPFLSKTVEQLIS  272 (279)
Q Consensus       194 ~~~~~~l~~~g~~~~~w~~~~~~~~~~y~~ava~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~  272 (279)
                      ......+...+. ...|.+..+.++++|.+|||+..++.+                          ..++.+|+.||+.
T Consensus        73 ~~~~~~~~~~~~-~~~~~~~~~~~~~~y~~Av~~~~~~~p--------------------------~~i~~~~~~~Ll~  124 (127)
T d1qr0a2          73 QDGQVSIELPDS-HSPCYIKTYEVDPGYKMAVCAAHPDFP--------------------------EDITMVSYEELLR  124 (127)
T ss_dssp             GGGCEEEECSCT-TSCCEEEEECSCTTEEEEEEESSSCCC--------------------------SSCEECCHHHHHC
T ss_pred             CCCCeEEEcCCC-CCCeEEEEeecCCCEEEEEEECCCCCC--------------------------CcEEEEcHHHHHh
Confidence            655566665553 467999999999999999999877531                          3578899999884
>d1qr0a1 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ftha_ d.150.1.2 (A:) Holo-(acyl carrier protein) synthase ACPS {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1f7la_ d.150.1.2 (A:) Holo-(acyl carrier protein) synthase ACPS {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ftha_ d.150.1.2 (A:) Holo-(acyl carrier protein) synthase ACPS {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1f7la_ d.150.1.2 (A:) Holo-(acyl carrier protein) synthase ACPS {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1qr0a2 d.150.1.1 (A:102-228) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1qr0a1 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure