Citrus Sinensis ID: 023696

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------28
Protein Sequence
MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDELTGRNIPSFK
Secondary Structure (PSIPRED)
ccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcccEEEEEEEEccccccccccEEEccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHcccccEcccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHcccccccc
Coil and Loop (DISEMBL)
mvlvneqrklsaslpLICRCIISCILVLLTQLTlslvprffaasPFIVQFALSGLVLLLVQTLCGWCRRLlgvcasapafvFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSimskdpglitnefphldklvegselgvdpdnenslsrKRVRYCKICKAhvegfdhhcpafgncigqnnYFLFIVLLVGFLATEASYVACSAqfvgksqnfdksqsenDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFnvrtdeltgrnipsfk
Flexible Loop (DISEMBL)
MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVegselgvdpdnenslsrkRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRtdeltgrnipsfk
Low Complexity Region (SEG)
MVLVNEQRKLSASLPLICRCIISCIlvlltqltlslvPRFFAASPFIVQFALSGlvlllvQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDELTGRNIPSFK
Disordered region (IsUnstruct)
***********ASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVE****************KRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNF*****ENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEL*********
Disordered Region (DISOPRED)
**************PLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLD**VEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDELTG*******
Disordered Region (DISEMBL)
********KLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDELTGRNIPSFK
Disordered Region (DISPRO)
*******RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDELTGRNIP*F*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDELTGRNIPSFK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	278	2.2.26 [Sep-21-2011]
Q9NYG2	327	Palmitoyltransferase ZDHH	no	no	0.388	0.330	0.307	4e-08
Q8R173	299	Palmitoyltransferase ZDHH	yes	no	0.388	0.361	0.299	8e-08
Q9NUE0	388	Palmitoyltransferase ZDHH	no	no	0.377	0.270	0.330	6e-07
Q550R7	434	Putative ZDHHC-type palmi	yes	no	0.151	0.096	0.545	2e-06
Q5Y5T2	380	Palmitoyltransferase ZDHH	no	no	0.377	0.276	0.321	2e-06
Q2TGJ1	386	Palmitoyltransferase ZDHH	no	no	0.377	0.272	0.321	2e-06
Q91WU6	308	Palmitoyltransferase ZDHH	no	no	0.622	0.561	0.247	6e-06
Q9UVH3	559	Palmitoyltransferase AKR1	N/A	no	0.392	0.194	0.291	6e-06
Q9M115	508	Probable S-acyltransferas	yes	no	0.197	0.108	0.328	6e-06
Q58DA8	363	Palmitoyltransferase ZDHH	no	no	0.377	0.289	0.338	7e-06

>sp|Q9NYG2|ZDHC3_HUMAN Palmitoyltransferase ZDHHC3 OS=Homo sapiens GN=ZDHHC3 PE=1 SV=1

 Score = 58.5 bits (140), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 9/117 (7%)

Query: 97  RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI-----TNEFPHLDKLVEGSELGVDP 150
           R  V S+I G+ FN+   + +   C  M  DPG +     T EF    +L  G  +   P
Sbjct: 71  RDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYKCP 130

Query: 151 DNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNN--YFLFIVLLVGFLATEA 205
               S+   R  +C +CK  +   DHHCP   NC+G+NN  YF+   + +  ++  A
Sbjct: 131 KC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHA 186

Palmitoyltransferase with broad specificity. Palmitoylates GABA receptors on their gamma subunit (GABRG1, GABRG2 and GABRG3), which regulates synaptic clustering and/or cell surface stability. Palmitoylates glutamate receptors GRIA1 and GRIA2, which leads to their retention in Golgi.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|Q8R173|ZDHC3_MOUSE Palmitoyltransferase ZDHHC3 OS=Mus musculus GN=Zdhhc3 PE=1 SV=1

 Score = 57.8 bits (138), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 9/117 (7%)

Query: 97  RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI-----TNEFPHLDKLVEGSELGVDP 150
           R    S+I G+ FN+   + +   C  M  DPG +     T EF    +L  G  +   P
Sbjct: 71  RDYAYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYKCP 130

Query: 151 DNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNN--YFLFIVLLVGFLATEA 205
               S+   R  +C +CK  +   DHHCP   NC+G+NN  YF+   + +  ++  A
Sbjct: 131 KC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHA 186

Palmitoyltransferase with broad specificity. Palmitoylates GABA receptors on their gamma subunit (GABRG1, GABRG2 and GABRG3), which regulates synaptic clustering and/or cell surface stability. Palmitoylates glutamate receptors GRIA1 and GRIA2, which leads to their retention in Golgi.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NUE0|ZDH18_HUMAN Palmitoyltransferase ZDHHC18 OS=Homo sapiens GN=ZDHHC18 PE=2 SV=2

 Score = 55.1 bits (131), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 7/112 (6%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFV---G 216
           R  +C +C   VE FDHHCP  GNC+G+ NY  F   ++      A   AC    +    
Sbjct: 204 RTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFYAFILSLSFLTAFIFACVVTHLTLRA 263

Query: 217 KSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE 268
           +  NF  +  E    V L      FSI  +L  + F   H Y V  N+ T+E
Sbjct: 264 QGSNFLSTLKETPASV-LELVICFFSIWSILGLSGF---HTYLVASNLTTNE 311

Has palmitoyltransferase activity towards HRAS and LCK.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q550R7|ZDHC1_DICDI Putative ZDHHC-type palmitoyltransferase 1 OS=Dictyostelium discoideum GN=DDB_G0276997 PE=3 SV=3

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 2/44 (4%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNY--FLFIVLLVGFL 201
           R  +C IC   VE FDHHCP  GNCIG+ NY  FL+ +  +GFL
Sbjct: 127 RANHCGICNNCVERFDHHCPWVGNCIGRRNYQTFLYFLYSLGFL 170

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5Y5T2|ZDH18_MOUSE Palmitoyltransferase ZDHHC18 OS=Mus musculus GN=Zdhhc18 PE=1 SV=4

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 7/112 (6%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVAC---SAQFVG 216
           R  +C +C   VE FDHHCP  GNC+G+ NY  F   ++      A   AC       + 
Sbjct: 196 RTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFYAFILSLSFLTAFIFACVVTHLTLLS 255

Query: 217 KSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE 268
           +  NF  +  +    V L      FSI  +L  + F   H Y V  N+ T+E
Sbjct: 256 QGSNFLSALKKTPASV-LELVICFFSIWSILGLSGF---HTYLVASNLTTNE 303

Has palmitoyltransferase activity towards HRAS and LCK.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q2TGJ1|ZDH18_RAT Palmitoyltransferase ZDHHC18 OS=Rattus norvegicus GN=Zdhhc18 PE=2 SV=1

 Score = 53.1 bits (126), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVAC---SAQFVG 216
           R  +C +C   VE FDHHCP  GNC+G+ NY  F   ++      A   AC       + 
Sbjct: 202 RTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFYAFILSLSFLTAFIFACVVTHLTLLS 261

Query: 217 KSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE 268
           +  NF  + ++    V L      FSI  +L  + F   H Y V  N+ T+E
Sbjct: 262 QGSNFLSALNKTPAGV-LELVICFFSIWSILGLSGF---HTYLVASNLTTNE 309

Has palmitoyltransferase activity towards HRAS and LCK.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q91WU6|ZDHC7_MOUSE Palmitoyltransferase ZDHHC7 OS=Mus musculus GN=Zdhhc7 PE=1 SV=1

 Score = 51.6 bits (122), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 9/182 (4%)

Query: 105 GGLFNIEVAMIIIGLCSIMSKDPGLI-----TNEFPHLDKLVEGSELGVDPDNENSLSRK 159
           G LFN    + +      M  DPG +     T E+    +L  G  +   P     +  +
Sbjct: 83  GVLFNCLAVLALSSHLRTMLTDPGAVPKGNATKEYMESLQLKPGEVIYKCPKC-CCIKPE 141

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGF-LATEASYVACSAQFVG-- 216
           R  +C ICK  +   DHHCP   NC+G+ N   F++  +   L++  + + C  QF+   
Sbjct: 142 RAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFTMYIALSSVHALILCGLQFISCV 201

Query: 217 KSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDELTGRNIPS 276
           + Q  + S       V L     L  +L   + AV F   I+ +C +    E      P+
Sbjct: 202 RGQWTECSDFSPPITVILLVFLCLEGLLFFTFTAVMFGTQIHSICNDETEIERLKSEKPT 261

Query: 277 FK 278
           ++
Sbjct: 262 WE 263

Palmitoyltransferase with broad specificity. Palmitoylates SNAP25 and DLG4/PSD95. May palmitoylate GABA receptors on their gamma subunit (GABRG1, GABRG2 and GABRG3) and regulate their synaptic clustering and/or cell surface stability.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9UVH3|AKR1_MORAP Palmitoyltransferase AKR1 (Fragment) OS=Mortierella alpina PE=3 SV=1

 Score = 51.6 bits (122), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 11/120 (9%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGK-S 218
           R ++CK C   V  FDHHCP   NCIG  N+  F++ L  FL++   Y   S +++   S
Sbjct: 284 RSKHCKFCNRCVAKFDHHCPWIYNCIGAKNHRAFLIFLALFLSSVPIYAYLSFEYLHVLS 343

Query: 219 QNFDKSQSE---------NDWVVNLATSTMLF-SILQLLWQAVFFMWHIYCVCFNVRTDE 268
            ++    S+           +  +  T+T+ F S+ Q+ W  + F+  +Y V     T+E
Sbjct: 344 PSYVPVSSDPCLLGDTLCGYFQYDAFTTTLAFWSLFQMTWPGLLFLVQLYQVGQAKTTNE 403

Palmitoyltransferase specific for casein kinase 1.

Mortierella alpina (taxid: 64518)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9M115|ZDH16_ARATH Probable S-acyltransferase At4g01730 OS=Arabidopsis thaliana GN=At4g01730 PE=2 SV=2

 Score = 51.6 bits (122), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 9/64 (14%)

Query: 140 LVEGSELGVDPDNENSLS---------RKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNY 190
           + +   +  DP  E+ +S         ++  ++C+ C   VEGFDHHC    NC+G+ NY
Sbjct: 141 MKDDDSVTPDPKEEDDISYCSLCDLEVKRSSKHCRTCNRCVEGFDHHCRWLNNCVGKKNY 200

Query: 191 FLFI 194
             FI
Sbjct: 201 TTFI 204

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q58DA8|ZDHC9_BOVIN Palmitoyltransferase ZDHHC9 OS=Bos taurus GN=ZDHHC9 PE=2 SV=1

 Score = 51.2 bits (121), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 58/127 (45%), Gaps = 22/127 (17%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNY---FLFI----VLLVGFLATEASYVACSA 212
           R  +C IC   VE FDHHCP  GNC+G+ NY   +LFI    +L +   A    YVA  +
Sbjct: 151 RASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYVALKS 210

Query: 213 QFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFM-WHIYCVCFNVRTDE--- 268
             +G    F ++  E    V L      F+    LW  V    +H + V  N  T+E   
Sbjct: 211 LKIG----FLETLKETPGTV-LEVLICFFT----LWSVVGLTGFHTFLVALNQTTNEDIK 261

Query: 269 --LTGRN 273
              TG+N
Sbjct: 262 GSWTGKN 268

The ZDHHC9-GOLGA7 complex is a palmitoyltransferase specific for HRAS and NRAS.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	278
297746095	311	unnamed protein product [Vitis vinifera]	1.0	0.893	0.544	3e-77
255585828	291	zinc finger protein, putative [Ricinus c	0.863	0.824	0.510	4e-69
225434978	311	PREDICTED: probable S-acyltransferase At	0.892	0.797	0.515	3e-64
115452213	299	Os03g0275400 [Oryza sativa Japonica Grou	0.917	0.852	0.462	1e-61
218192534	328	hypothetical protein OsI_10951 [Oryza sa	0.928	0.786	0.455	2e-61
222624656	370	hypothetical protein OsJ_10323 [Oryza sa	0.928	0.697	0.451	1e-60
357112878	313	PREDICTED: palmitoyltransferase ZDHHC17-	0.971	0.862	0.432	4e-60
414866099	299	TPA: hypothetical protein ZEAMMB73_41357	0.971	0.903	0.422	3e-58
226495287	315	DHHC zinc finger domain containing prote	0.974	0.860	0.415	2e-57
226529695	299	DHHC zinc finger domain containing prote	0.989	0.919	0.438	5e-57

>gi|297746095|emb|CBI16151.3| unnamed protein product [Vitis vinifera]

 Score =  294 bits (753), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 152/279 (54%), Positives = 195/279 (69%), Gaps = 1/279 (0%)

Query: 1   MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLV 60
           M+++++Q+ +  SL LI RC+ISCI V LTQ  LS+VPRFFAAS  ++Q  LS L+LL++
Sbjct: 1   MLVLDDQKSMRISLKLIGRCMISCIFVFLTQFALSIVPRFFAASSLLIQLPLSALLLLVL 60

Query: 61  QTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLC 120
                 CRR LGV ASAPAFVFFN+LFIWG YI ++R+ +S L+G + N E+ M+IIGL 
Sbjct: 61  LGAGRCCRRFLGVYASAPAFVFFNLLFIWGVYIVILRKVISPLMGIVLNGEIVMLIIGLY 120

Query: 121 SIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPA 180
           SI+S DPG +T+     D   E S    +   E S S +RVRYCK CKA+V+GFDHHCPA
Sbjct: 121 SILSSDPGFVTSRSSCSDNHAEDSFSEDEAHFEGSFSSRRVRYCKSCKAYVKGFDHHCPA 180

Query: 181 FGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTML 240
           FGNCIGQ N+ LF+VLLVGF+ TEASY+  S +F  K Q  D++  E     NL  STML
Sbjct: 181 FGNCIGQKNHVLFMVLLVGFVITEASYIMDSFKFATKFQKMDETGQETSLSENLVISTML 240

Query: 241 FSILQLLWQAVFFMWHIYCVCFNVRTDE-LTGRNIPSFK 278
           F +LQ+LWQ VF  WHIYCVC N+RTDE +  +  P F+
Sbjct: 241 FCLLQVLWQGVFLTWHIYCVCVNIRTDEWINWKKYPEFQ 279

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585828|ref|XP_002533592.1| zinc finger protein, putative [Ricinus communis] gi|223526536|gb|EEF28797.1| zinc finger protein, putative [Ricinus communis]

 Score =  267 bits (682), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 141/276 (51%), Positives = 178/276 (64%), Gaps = 36/276 (13%)

Query: 4   VNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTL 63
           + ++R+  A LP   RC +S ILVLLTQ +LSL+PRFF+AS F++Q  LSG+V+L V   
Sbjct: 1   MQQERRKEALLPKFGRCTVSSILVLLTQFSLSLIPRFFSASSFLLQLTLSGIVVLFVLGF 60

Query: 64  CGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIM 123
             WCRRLLGV ASAPAFVF N+LFIW  Y  VVR AV   +  +F+ EV M+ IG     
Sbjct: 61  GRWCRRLLGVHASAPAFVFLNLLFIWSVYFCVVRPAVPFFMDAIFSGEVVMLFIG----- 115

Query: 124 SKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGN 183
             DP L+                            KRVRYCK CKA+V+GFDHHCPAFGN
Sbjct: 116 --DPLLL----------------------------KRVRYCKSCKAYVKGFDHHCPAFGN 145

Query: 184 CIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSI 243
           CIGQ+N+ LF+VLL+GFL+TEASY+ CS QFV  SQ    ++ E      L T TMLF++
Sbjct: 146 CIGQSNHALFMVLLLGFLSTEASYIMCSLQFVRGSQIEPVTRFELGLRGTLVTGTMLFTL 205

Query: 244 LQLLWQAVFFMWHIYCVCFNVRTDE-LTGRNIPSFK 278
           LQ+LWQ +F  WHIYC+CFN+RTDE +  +  P F+
Sbjct: 206 LQVLWQGIFMAWHIYCICFNIRTDEWINWKKYPEFQ 241

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434978|ref|XP_002281137.1| PREDICTED: probable S-acyltransferase At2g14255-like [Vitis vinifera]

 Score =  251 bits (641), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 137/266 (51%), Positives = 178/266 (66%), Gaps = 18/266 (6%)

Query: 1   MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLV 60
           M+++++Q+ +  SL LI RC+ISCI V LTQ  LS+VPRFFAAS  ++Q  LS L+LL++
Sbjct: 1   MLVLDDQKSMRISLKLIGRCMISCIFVFLTQFALSIVPRFFAASSLLIQLPLSALLLLVL 60

Query: 61  QTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLC 120
                 CRR LGV ASAPAFVFFN+LFIWG YI ++R+ +S L+G + N E+ M+IIGL 
Sbjct: 61  LGAGRCCRRFLGVYASAPAFVFFNLLFIWGVYIVILRKVISPLMGIVLNGEIVMLIIGLY 120

Query: 121 SIMSKDPGLITN---------------EFPHLD--KLVEGSELGVDPDNENSLSRKRVRY 163
           SI+S DPG +T+               +  H +  K + G      P  E S S +RVRY
Sbjct: 121 SILSSDPGFVTSRSSCSDNHAEDSFSEDEAHFEILKTLTGGTCHEHP-TEGSFSSRRVRY 179

Query: 164 CKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDK 223
           CK CKA+V+GFDHHCPAFGNCIGQ N+ LF+VLLVGF+ TEASY+  S +F  K Q  D+
Sbjct: 180 CKSCKAYVKGFDHHCPAFGNCIGQKNHVLFMVLLVGFVITEASYIMDSFKFATKFQKMDE 239

Query: 224 SQSENDWVVNLATSTMLFSILQLLWQ 249
           +  E     NL  STMLF +LQ+LWQ
Sbjct: 240 TGQETSLSENLVISTMLFCLLQVLWQ 265

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115452213|ref|NP_001049707.1| Os03g0275400 [Oryza sativa Japonica Group] gi|108707456|gb|ABF95251.1| DHHC zinc finger domain containing protein, expressed [Oryza sativa Japonica Group] gi|113548178|dbj|BAF11621.1| Os03g0275400 [Oryza sativa Japonica Group] gi|215767922|dbj|BAH00151.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  242 bits (617), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 118/255 (46%), Positives = 163/255 (63%)

Query: 23  SCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVF 82
           SC L LL+QL +++VPR F +   +    ++G+V L V  +  + RR +GV ASAP FV 
Sbjct: 27  SCGLTLLSQLAVAMVPRLFPSLSLLAMLPVAGVVFLAVIVVGRFWRRFIGVAASAPLFVL 86

Query: 83  FNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVE 142
           FNILF+WG Y+ V+R   SSL+  + N E AM++ GL  I S DPG++  E    ++   
Sbjct: 87  FNILFLWGVYVFVIRGGTSSLLDMVINAECAMLLFGLYRIFSGDPGIVIYESSFFEEAGC 146

Query: 143 GSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLA 202
              +     +E   S  RVR+C  CKA+V G+DHHCPAFGNCIGQ N+ LF+ LL GF+ 
Sbjct: 147 KDFVEAICPSEKFSSLPRVRHCNCCKANVRGYDHHCPAFGNCIGQKNHRLFMALLTGFVV 206

Query: 203 TEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCF 262
            E++Y  CS +++ +  N    +SEN   VN+   TMLFS+LQ+LWQAVF +WHIYC+CF
Sbjct: 207 AESTYTMCSTKYITRCINSGTIRSENPMSVNMVIGTMLFSVLQVLWQAVFLIWHIYCICF 266

Query: 263 NVRTDELTGRNIPSF 277
           N++TDE    N P F
Sbjct: 267 NIKTDEWVMSNFPCF 281

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218192534|gb|EEC74961.1| hypothetical protein OsI_10951 [Oryza sativa Indica Group]

 Score =  241 bits (616), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 118/259 (45%), Positives = 167/259 (64%), Gaps = 1/259 (0%)

Query: 21  IISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAF 80
           + SC L LL+QL +++VPR F +   +    ++G+V L V  +  + RR +GV ASAP F
Sbjct: 25  LASCGLTLLSQLAVAMVPRLFPSLSLLAMLPVAGVVFLAVIVVGRFWRRFIGVAASAPLF 84

Query: 81  VFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKL 140
           V FNILF+WG Y+ V+R   SSL+  + N E AM++ GL  I S DPG++T E    ++ 
Sbjct: 85  VLFNILFLWGVYVFVIRGGTSSLLDMVINAECAMLLFGLYRIFSGDPGIVTYESSFFEEA 144

Query: 141 VEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGF 200
                +     +E   S  RVR+C  CKA+V G+DHHCPAFGNCIGQ N+ LF+ LL GF
Sbjct: 145 GCKDFVEAICPSEKFSSLPRVRHCNCCKANVRGYDHHCPAFGNCIGQKNHRLFMALLTGF 204

Query: 201 LATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCV 260
           +  E++Y  CS +++ +  N    +SEN   VN+   TMLFS+LQ+LWQAVF +WHIYC+
Sbjct: 205 VVAESTYTMCSTKYITRCINSGTIRSENPMSVNMVIGTMLFSVLQVLWQAVFLIWHIYCI 264

Query: 261 CFNVRTDE-LTGRNIPSFK 278
           CFN++TDE +  +  P F+
Sbjct: 265 CFNIKTDEWINWKKYPEFQ 283

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222624656|gb|EEE58788.1| hypothetical protein OsJ_10323 [Oryza sativa Japonica Group]

 Score =  239 bits (609), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 117/259 (45%), Positives = 166/259 (64%), Gaps = 1/259 (0%)

Query: 21  IISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAF 80
           + SC L LL+QL +++VPR F +   +    ++G+V L V  +  + RR +GV ASAP F
Sbjct: 25  LASCGLTLLSQLAVAMVPRLFPSLSLLAMLPVAGVVFLAVIVVGRFWRRFIGVAASAPLF 84

Query: 81  VFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKL 140
           V FNILF+WG Y+ V+R   SSL+  + N E AM++ GL  I S DPG++  E    ++ 
Sbjct: 85  VLFNILFLWGVYVFVIRGGTSSLLDMVINAECAMLLFGLYRIFSGDPGIVIYESSFFEEA 144

Query: 141 VEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGF 200
                +     +E   S  RVR+C  CKA+V G+DHHCPAFGNCIGQ N+ LF+ LL GF
Sbjct: 145 GCKDFVEAICPSEKFSSLPRVRHCNCCKANVRGYDHHCPAFGNCIGQKNHRLFMALLTGF 204

Query: 201 LATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCV 260
           +  E++Y  CS +++ +  N    +SEN   VN+   TMLFS+LQ+LWQAVF +WHIYC+
Sbjct: 205 VVAESTYTMCSTKYITRCINSGTIRSENPMSVNMVIGTMLFSVLQVLWQAVFLIWHIYCI 264

Query: 261 CFNVRTDE-LTGRNIPSFK 278
           CFN++TDE +  +  P F+
Sbjct: 265 CFNIKTDEWINWKKYPEFQ 283

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357112878|ref|XP_003558232.1| PREDICTED: palmitoyltransferase ZDHHC17-like [Brachypodium distachyon]

 Score =  237 bits (604), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 119/275 (43%), Positives = 172/275 (62%), Gaps = 5/275 (1%)

Query: 7   QRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGW 66
            R   +   ++   ++SC LVL +QL ++ VPRFF +   +    ++GLV L    +  +
Sbjct: 9   HRLRRSPWEVVLSALVSCGLVLFSQLAVATVPRFFPSLSLLAMLPVAGLVFLAAIVVGRF 68

Query: 67  CRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKD 126
            RR +GV ASAP FV FN+LF+WG YI V+R   SSL+  L N E A+++ GL  I+S D
Sbjct: 69  WRRFIGVAASAPLFVLFNVLFMWGVYIFVIRGDTSSLLDMLINAECALLLWGLYRILSGD 128

Query: 127 PGLITNEFPHLDKLVEGSELGVDP--DNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNC 184
           PG++  E   L++   G    VD    +E   S  RVR+C  CKA+V G+DHHCPAFGNC
Sbjct: 129 PGIVAYESSFLEE--AGCNDFVDAICSSEKHPSLSRVRHCNSCKANVRGYDHHCPAFGNC 186

Query: 185 IGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSIL 244
           IGQ N+ LFI LL GF+  E++Y  CS +++ +  N    ++EN   +N+   TMLFS+L
Sbjct: 187 IGQKNHRLFIALLTGFVVAESTYTMCSTKYITRCINSGTIRTENPLSLNMVIGTMLFSVL 246

Query: 245 QLLWQAVFFMWHIYCVCFNVRTDE-LTGRNIPSFK 278
           Q+LWQ VF +WH+Y +CFN++TDE +  +  P F+
Sbjct: 247 QVLWQVVFLIWHVYGICFNIKTDEWINWKKYPEFQ 281

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414866099|tpg|DAA44656.1| TPA: hypothetical protein ZEAMMB73_413571 [Zea mays]

 Score =  231 bits (588), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 114/270 (42%), Positives = 165/270 (61%)

Query: 8   RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWC 67
           R+ S+   ++   + SC LVL +QL +++VPR F     +    ++GLV +    L    
Sbjct: 12  RRSSSQWEVLWSALASCGLVLFSQLAVAMVPRLFPFLSLLAMLPIAGLVFIAAIVLGRLW 71

Query: 68  RRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDP 127
           RR +GV ASAP FV FNIL +WG Y+ V+R+  SSL+  L N E A+++ G   I+S DP
Sbjct: 72  RRFIGVAASAPLFVLFNILLLWGVYVFVIRRETSSLLDMLINAECALLLWGFYRILSGDP 131

Query: 128 GLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQ 187
           G++  +  +L++      +     +E      RVR C  CKA++ G+DHHCPAFG CIGQ
Sbjct: 132 GIVACDSSYLEEAGCKDFVEAIYSSEKLPMLSRVRQCTWCKANIRGYDHHCPAFGTCIGQ 191

Query: 188 NNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLL 247
            N+ LF+ LL GF+  E++Y  CS +++ +  +    +SEN   +N+  ST LFSILQ+L
Sbjct: 192 KNHRLFMALLTGFVVAESTYTMCSTKYITRCISSGTIRSENPVSLNIVISTTLFSILQVL 251

Query: 248 WQAVFFMWHIYCVCFNVRTDELTGRNIPSF 277
           WQ VF MWHIYC+CFN++TDE    N P F
Sbjct: 252 WQIVFLMWHIYCICFNIKTDEWVISNFPCF 281

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495287|ref|NP_001148505.1| DHHC zinc finger domain containing protein [Zea mays] gi|223945801|gb|ACN26984.1| unknown [Zea mays] gi|414866098|tpg|DAA44655.1| TPA: DHHC zinc finger domain containing protein [Zea mays]

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 113/272 (41%), Positives = 167/272 (61%), Gaps = 1/272 (0%)

Query: 8   RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWC 67
           R+ S+   ++   + SC LVL +QL +++VPR F     +    ++GLV +    L    
Sbjct: 12  RRSSSQWEVLWSALASCGLVLFSQLAVAMVPRLFPFLSLLAMLPIAGLVFIAAIVLGRLW 71

Query: 68  RRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDP 127
           RR +GV ASAP FV FNIL +WG Y+ V+R+  SSL+  L N E A+++ G   I+S DP
Sbjct: 72  RRFIGVAASAPLFVLFNILLLWGVYVFVIRRETSSLLDMLINAECALLLWGFYRILSGDP 131

Query: 128 GLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQ 187
           G++  +  +L++      +     +E      RVR C  CKA++ G+DHHCPAFG CIGQ
Sbjct: 132 GIVACDSSYLEEAGCKDFVEAIYSSEKLPMLSRVRQCTWCKANIRGYDHHCPAFGTCIGQ 191

Query: 188 NNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLL 247
            N+ LF+ LL GF+  E++Y  CS +++ +  +    +SEN   +N+  ST LFSILQ+L
Sbjct: 192 KNHRLFMALLTGFVVAESTYTMCSTKYITRCISSGTIRSENPVSLNIVISTTLFSILQVL 251

Query: 248 WQAVFFMWHIYCVCFNVRTDE-LTGRNIPSFK 278
           WQ VF MWHIYC+CFN++TDE +  +  P F+
Sbjct: 252 WQIVFLMWHIYCICFNIKTDEWINWKKYPEFQ 283

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226529695|ref|NP_001150024.1| DHHC zinc finger domain containing protein [Zea mays] gi|195636184|gb|ACG37560.1| DHHC zinc finger domain containing protein [Zea mays] gi|413956176|gb|AFW88825.1| DHHC zinc finger domain containing protein [Zea mays]

 Score =  227 bits (578), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 121/276 (43%), Positives = 165/276 (59%), Gaps = 1/276 (0%)

Query: 3   LVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQT 62
           L   +R LS    L C  + SC LVL +QL +++VPR F +   +    ++GLVLL    
Sbjct: 8   LQRPRRSLSPCEVLWCA-LASCGLVLFSQLAVAMVPRLFPSLYLLAMLPIAGLVLLAAIV 66

Query: 63  LCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSI 122
           L    RR +GV ASAP FV FNIL  WG YI V+R+  SSL+  L N E A+++ G   I
Sbjct: 67  LGRLWRRFIGVTASAPLFVLFNILLSWGVYIFVIRRKTSSLLDMLINAECALLLWGFYRI 126

Query: 123 MSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFG 182
           +S DPG+   +  +L +      +     +E      RVR C  CKA++ G+DHHCPAFG
Sbjct: 127 LSCDPGIFACDSSYLAEAGCKDFVEAIYTSERLPMLSRVRQCTWCKANIRGYDHHCPAFG 186

Query: 183 NCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFS 242
            CIGQ N+ LF+ LL GF+  E++Y  CS +++    +    +SEN   +N+  STMLFS
Sbjct: 187 TCIGQKNHRLFMALLTGFVVAESTYTMCSTKYITICISSGTIKSENPVSLNMVISTMLFS 246

Query: 243 ILQLLWQAVFFMWHIYCVCFNVRTDELTGRNIPSFK 278
           ILQ+LWQ VF MWHIYC+CFN++T E    N P F+
Sbjct: 247 ILQVLWQIVFLMWHIYCICFNIKTYEWVISNFPCFR 282

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	278
UNIPROTKB|Q08DX8	299	ZDHHC3 "Uncharacterized protei	0.687	0.638	0.267	5.7e-11
UNIPROTKB|F1SRC6	297	ZDHHC3 "Uncharacterized protei	0.687	0.643	0.263	7.7e-11
UNIPROTKB|E2QS45	298	ZDHHC3 "Uncharacterized protei	0.687	0.640	0.263	7.8e-11
UNIPROTKB|E2RND6	299	ZDHHC3 "Uncharacterized protei	0.687	0.638	0.263	7.9e-11
MGI|MGI:1926134	299	Zdhhc3 "zinc finger, DHHC doma	0.687	0.638	0.263	1.4e-10
RGD|1309041	299	Zdhhc3 "zinc finger, DHHC-type	0.687	0.638	0.258	2e-10
UNIPROTKB|E1BXI1	299	E1BXI1 "Uncharacterized protei	0.690	0.642	0.264	8.7e-10
ZFIN|ZDB-GENE-040718-346	299	zdhhc7 "zinc finger, DHHC-type	0.687	0.638	0.272	3.6e-09
UNIPROTKB|E2RND4	327	ZDHHC3 "Uncharacterized protei	0.471	0.400	0.290	3.6e-09
UNIPROTKB|Q9NYG2	327	ZDHHC3 "Palmitoyltransferase Z	0.471	0.400	0.290	3.6e-09

UNIPROTKB|Q08DX8 ZDHHC3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 169 (64.5 bits), Expect = 5.7e-11, P = 5.7e-11
 Identities = 56/209 (26%), Positives = 93/209 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R  V S+I GL FN+   + +   C  M  DPG + 
Sbjct:    47 CAIVTWFLVLYAEFVVLFVMLIPSRDYVYSVINGLVFNLLAFLALASHCRAMLTDPGAVP 106

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   107 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 165

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLFS- 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F  
Sbjct:   166 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEG 224

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDELTG 271
             +L L++ +V F   ++ +C    TDE TG
Sbjct:   225 LLFLIFTSVMFGTQVHSIC----TDE-TG 248

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1SRC6 ZDHHC3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 168 (64.2 bits), Expect = 7.7e-11, P = 7.7e-11
 Identities = 55/209 (26%), Positives = 93/209 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R  V S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    46 CAIVTWFLVLYAEFVVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 105

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   106 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 164

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLFS- 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F  
Sbjct:   165 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEG 223

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDELTG 271
             +L L++ +V F   ++ +C    TDE TG
Sbjct:   224 LLFLIFTSVMFGTQVHSIC----TDE-TG 247

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2QS45 ZDHHC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 168 (64.2 bits), Expect = 7.8e-11, P = 7.8e-11
 Identities = 55/209 (26%), Positives = 93/209 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R  V S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    46 CAIVTWFLVLYAEFVVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 105

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   106 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 164

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLFS- 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F  
Sbjct:   165 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEG 223

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDELTG 271
             +L L++ +V F   ++ +C    TDE TG
Sbjct:   224 LLFLIFTSVMFGTQVHSIC----TDE-TG 247

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2RND6 ZDHHC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 168 (64.2 bits), Expect = 7.9e-11, P = 7.9e-11
 Identities = 55/209 (26%), Positives = 93/209 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R  V S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    47 CAIVTWFLVLYAEFVVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 106

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   107 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 165

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLFS- 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F  
Sbjct:   166 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEG 224

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDELTG 271
             +L L++ +V F   ++ +C    TDE TG
Sbjct:   225 LLFLIFTSVMFGTQVHSIC----TDE-TG 248

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:1926134 Zdhhc3 "zinc finger, DHHC domain containing 3" [Mus musculus (taxid:10090)]

 Score = 166 (63.5 bits), Expect = 1.4e-10, P = 1.4e-10
 Identities = 55/209 (26%), Positives = 93/209 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + V  R    S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    47 CAIVTWFLVLYAEFVVLFVMLVPSRDYAYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 106

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   107 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 165

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLF-S 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F +
Sbjct:   166 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEA 224

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDELTG 271
             +L L++ +V F   ++ +C    TDE TG
Sbjct:   225 LLFLIFTSVMFGTQVHSIC----TDE-TG 248

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006605 "protein targeting" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1309041 Zdhhc3 "zinc finger, DHHC-type containing 3" [Rattus norvegicus (taxid:10116)]

 Score = 165 (63.1 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 54/209 (25%), Positives = 93/209 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R    S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    47 CAIVTWFLVLYAEFVVLFVMLIPSRDYAYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 106

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   107 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 165

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLF-S 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F +
Sbjct:   166 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEA 224

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDELTG 271
             +L L++ +V F   ++ +C    TDE TG
Sbjct:   225 LLFLIFTSVMFGTQVHSIC----TDE-TG 248

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0006605 "protein targeting" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IEA;ISO

GO:0018345 "protein palmitoylation" evidence=IEA;ISO

UNIPROTKB|E1BXI1 E1BXI1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 160 (61.4 bits), Expect = 8.7e-10, P = 8.7e-10
 Identities = 56/212 (26%), Positives = 93/212 (43%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-----RQAVSSLIGG-LFNIEVAMIIIGLCSIMSKDP 127
             C  A A V + ++F   F + +V     R  V S+I G LFN    + +      M  DP
Sbjct:    43 CGIACAVVTWMLVFYADFVVLLVMLVPSRDYVYSVINGTLFNTLAFLALASHFRAMLTDP 102

Query:   128 GLI-----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFG 182
             G +     T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   
Sbjct:   103 GAVPKGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVN 161

Query:   183 NCIGQNN--YFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTML 240
             NC+G+NN  YF+   + +  ++  A  +          +++ K  S +     +    + 
Sbjct:   162 NCVGENNQKYFVLFTMYIALISLHALIMVGFHFLYCFEEDWTKCSSFSPPTTVILLILLC 221

Query:   241 F-SILQLLWQAVFFMWHIYCVCFNVRTDELTG 271
             F ++L L++ +V F   ++ +C    TDE TG
Sbjct:   222 FEALLFLIFTSVMFGTQVHSIC----TDE-TG 248

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006605 "protein targeting" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

ZFIN|ZDB-GENE-040718-346 zdhhc7 "zinc finger, DHHC-type containing 7" [Danio rerio (taxid:7955)]

 Score = 155 (59.6 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 57/209 (27%), Positives = 90/209 (43%)

Query:    74 CASAPAFVFFNILFIWGFYIAVVRQAVS-----SLIGGL-FNIEVAMIIIGLCSIMSKDP 127
             C    AF+ ++++    F +  V    S     +LI G+ FN    + +      M  DP
Sbjct:    37 CGMVCAFMTWSLVMYAEFVVNFVMLLPSKNFWYTLINGVAFNFLAVLALTSHLRTMLTDP 96

Query:   128 GLI-----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFG 182
             G +     T E+    +L  G  +   P    S+  +R  +C ICK  +   DHHCP   
Sbjct:    97 GAVPKGNATKEYMESLQLKPGEVIYKCPKC-CSIKPERAHHCSICKRCIRKMDHHCPWVN 155

Query:   183 NCIGQNNYFLFIVLLVGFLATEASYVACSAQF----VGKSQNFDKSQSENDWVVNLATST 238
             NC+G+NN   F VL   ++A+ + +  C + F      K Q  + S       V L    
Sbjct:   156 NCVGENNQ-RFFVLFTMYIASISLHALCLSGFHFFTCVKVQWNECSDFSPPVAVMLLIFL 214

Query:   239 MLFSILQLLWQAVFFMWHIYCVCFNVRTD 267
              L ++L L + AV F   I+ +C N  T+
Sbjct:   215 CLEALLFLTFTAVMFGTQIHSIC-NDETE 242

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E2RND4 ZDHHC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 156 (60.0 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 41/141 (29%), Positives = 64/141 (45%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R  V S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    47 CAIVTWFLVLYAEFVVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 106

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   107 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 165

Query:   187 QNN--YFLFIVLLVGFLATEA 205
             +NN  YF+   + +  ++  A
Sbjct:   166 ENNQKYFVLFTMYIALISLHA 186

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IEA

GO:0006605 "protein targeting" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q9NYG2 ZDHHC3 "Palmitoyltransferase ZDHHC3" [Homo sapiens (taxid:9606)]

 Score = 156 (60.0 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 41/141 (29%), Positives = 64/141 (45%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R  V S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    47 CAIVTWFLVLYAEFVVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 106

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   107 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 165

Query:   187 QNN--YFLFIVLLVGFLATEA 205
             +NN  YF+   + +  ++  A
Sbjct:   166 ENNQKYFVLFTMYIALISLHA 186

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006605 "protein targeting" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: 4332408 DHHC zinc finger domain containing protein, expressed (315 aa) (Oryza sativa Japonica)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	278
pfam01529	167	pfam01529, zf-DHHC, DHHC palmitoyltransferase	8e-16
COG5273	309	COG5273, COG5273, Uncharacterized protein containi	1e-10

>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase

 Score = 72.9 bits (179), Expect = 8e-16
 Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 9/155 (5%)

Query: 119 LCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLS-------RK--RVRYCKICKA 169
               +  DPG +       ++  +  E   + D E+ L         K  R  +C++C  
Sbjct: 4   YFKTIFTDPGYVPKNPTEKEQEKQPDEESEEGDEEDELKFCSTCNIIKPPRSHHCRVCNR 63

Query: 170 HVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSEND 229
            V  FDHHCP   NCIG+ N+  F++ L+         +  S  ++       +      
Sbjct: 64  CVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYLILLLVLSFYYLVYLIRNIELFFFLI 123

Query: 230 WVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNV 264
             +  +   ++ S+  LL+ +    +H+Y +  N+
Sbjct: 124 LSLFSSIILLVLSLFFLLFLSFLLFFHLYLILKNI 158

This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

 Score = 60.5 bits (147), Expect = 1e-10
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 4/110 (3%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQF-VGKS 218
           R  +C IC   V  FDHHCP   NC+G  NY  F   L+ +    A  V  S  + +   
Sbjct: 122 RSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLL-YTILVALVVLLSTAYYIAGI 180

Query: 219 QNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE 268
            +     S     +    S +      +    +  ++ IY +  N+ T E
Sbjct: 181 FSIRHDTSLAICFLIFGCSLLGVVFFIIT--TLLLLFLIYLILNNLTTIE 228

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	278
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	100.0
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	100.0
KOG1314	414	consensus DHHC-type Zn-finger protein [General fun	100.0
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	100.0
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	100.0
KOG1313	309	consensus DHHC-type Zn-finger proteins [General fu	100.0
KOG1312	341	consensus DHHC-type Zn-finger proteins [General fu	99.97
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.96
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	94.1
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	93.13
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	89.38
PF13240	23	zinc_ribbon_2: zinc-ribbon domain	89.32
PRK04136	48	rpl40e 50S ribosomal protein L40e; Provisional	88.07
PF13248	26	zf-ribbon_3: zinc-ribbon domain	87.6
PF06906	57	DUF1272: Protein of unknown function (DUF1272); In	85.19
PTZ00303	1374	phosphatidylinositol kinase; Provisional	81.1
KOG1314	414	consensus DHHC-type Zn-finger protein [General fun	80.72

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=6.8e-42  Score=309.18  Aligned_cols=198  Identities=20%  Similarity=0.295  Sum_probs=147.0

Q ss_pred             hcceeeecccccchhHHHHHHHHhhhhhhhhhhccch--------hhHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCC
Q 023696           64 CGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAV--------SSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFP  135 (278)
Q Consensus        64 ~~~~~r~~~w~~~~p~~~~~~~~~~~~~y~~v~~~~~--------~~~~~ii~~~l~~~~~~s~~~~~~~dPG~vp~~~~  135 (278)
                      .++++|   |   .|+ +++.....|.+|+++.....        .....+.++.+.++..|+|++++.+|||.+|....
T Consensus         7 ~~~~~r---~---~~~-~~i~~~~~~~yy~~v~~~c~~~i~~~~~~~~~ll~~~~ll~m~~~sy~~~vf~~pg~vp~~~~   79 (307)
T KOG1315|consen    7 FSKCLR---W---IPV-LIILLVIGWTYYVYVAVLCILSISLTIPSVLLLLLFHLLLIMFLWSYFRTVFTDPGRVPDSYR   79 (307)
T ss_pred             chhhhc---c---hhh-eeeeeeEEEEEEEeehhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHheeEecCCCCccccC
Confidence            345555   5   665 66667788888888765432        33456788999999999999999999999997643


Q ss_pred             Cchhhh------------------cCCCCCCCCCCCCCCCCCCcccccccceeecccccccccccccccccchHHHHHHH
Q 023696          136 HLDKLV------------------EGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLL  197 (278)
Q Consensus       136 ~~~~~~------------------~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHCpWl~nCIG~~N~r~FilfL  197 (278)
                      .+.++.                  ..+...++|.+|+.+||+|||||++|+|||+||||||||+|||||.+|||+|++|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~R~C~kC~~iKPdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~NyKfF~lfl  159 (307)
T KOG1315|consen   80 PSVEDEDSLENGSDNERDLPGYTRTSDGAVRYCDKCKCIKPDRAHHCSVCNRCVLKMDHHCPWINNCVGFRNYKFFLLFL  159 (307)
T ss_pred             CCcCccccccccCcccccceeeEecCCCCceeecccccccCCccccchhhhhhhhccccCCcceeceecccchHHHHHHH
Confidence            221111                  11235789999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhcCCCCCcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchhccc
Q 023696          198 VGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDELT  270 (278)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~i~~~~~~~~~~~ll~~hl~li~~n~TT~E~~  270 (278)
                      +|..+.+.................+  ...++.......+.++.++..++.+++++++|++|+++|+||+|..
T Consensus       160 ~y~~l~~~~~lv~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~f~i~l~~~l~~h~~Li~~N~TTiE~~  230 (307)
T KOG1315|consen  160 FYTNLYSIYVLVTTLIGFTKYFQGG--AGPSSLLLFFIVFLFLVAIAFSISLSGLLCFHTYLILKNKTTIEAY  230 (307)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcc--ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhh
Confidence            9999877665555444444433221  1112211222333455555566666779999999999999999999

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=100.00  E-value=8.6e-41  Score=281.93  Aligned_cols=157  Identities=20%  Similarity=0.287  Sum_probs=119.1

Q ss_pred             HHHHHHHhcCCCcCCCCCCCc----------------hhhhcCCCCCCCCCCCCCCCCCCcccccccceeeccccccccc
Q 023696          117 IGLCSIMSKDPGLITNEFPHL----------------DKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPA  180 (278)
Q Consensus       117 ~s~~~~~~~dPG~vp~~~~~~----------------~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHCpW  180 (278)
                      ++|+++..+|||++|++...+                .++.+.+...++|++|+.+||+|||||+.||+||.|+||||||
T Consensus         2 ~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~w   81 (174)
T PF01529_consen    2 WSYFLTIFIDPGYVPRSNPDEDQRQEEKEEEQNQSIDSPEDDENGELKYCSTCKIIKPPRSHHCRVCNRCVLRFDHHCPW   81 (174)
T ss_pred             EEehhhheECCcccCCccccccccccccccccchhhhhhccccCCCCEECcccCCcCCCcceeccccccccccccccchh
Confidence            578999999999999881100                0011223467899999999999999999999999999999999


Q ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023696          181 FGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCV  260 (278)
Q Consensus       181 l~nCIG~~N~r~FilfL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~i~~~~~~~~~~~ll~~hl~li  260 (278)
                      +|||||++|||+|++|+++..+...+....++..+....................++.++.+++..++++.+++.|++++
T Consensus        82 ~~~cIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  161 (174)
T PF01529_consen   82 LGNCIGRRNHRYFLLFLLYLCLYCLYFFILSLYYLVRYIPSISFSSFWIFSNFSSIFLLIISIFFFIFVGFLLIFQLYLI  161 (174)
T ss_pred             hccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999988777666555555443322222111111111124566677888889999999999999


Q ss_pred             hcCcchhcccccc
Q 023696          261 CFNVRTDELTGRN  273 (278)
Q Consensus       261 ~~n~TT~E~~~~r  273 (278)
                      ++|+||+|.+++|
T Consensus       162 ~~n~Tt~E~~~~~  174 (174)
T PF01529_consen  162 LRNITTYERIKRK  174 (174)
T ss_pred             HcCCcHHHHHHcC
Confidence            9999999999543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=2.1e-37  Score=277.48  Aligned_cols=199  Identities=16%  Similarity=0.118  Sum_probs=138.9

Q ss_pred             eeeecccccchhHHHHHHHH-hhhh-hhh--hhhccc---hhhHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCCCchh
Q 023696           67 CRRLLGVCASAPAFVFFNIL-FIWG-FYI--AVVRQA---VSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDK  139 (278)
Q Consensus        67 ~~r~~~w~~~~p~~~~~~~~-~~~~-~y~--~v~~~~---~~~~~~ii~~~l~~~~~~s~~~~~~~dPG~vp~~~~~~~~  139 (278)
                      .+|++.|   +|...+.++. +++. .|.  ....|.   .+....+.|.+...|.+++|+.++.++||++|.++.++..
T Consensus         9 ~rr~~hw---Gpi~alsiit~i~~~~~~~n~lww~p~ss~~g~~n~i~f~~~~~m~~~ny~~A~~~gPG~vp~~wkPe~~   85 (414)
T KOG1314|consen    9 FRRFLHW---GPITALSIITIITSTTGYMNSLWWFPLSSFLGVPNQITFLLWTSMILYNYFNAIFTGPGFVPLGWKPENP   85 (414)
T ss_pred             hhheecc---ccHHHHHHHHHHHHHHHHhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCC
Confidence            6788898   8876444322 2222 333  122232   3455788888899999999999999999999999765432


Q ss_pred             hhcCCCCCCCCCCCCCCCCCCcccccccceeecccccccccccccccccchHHHHHHHHHHHHHHH----HHHHHHHHHh
Q 023696          140 LVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEA----SYVACSAQFV  215 (278)
Q Consensus       140 ~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHCpWl~nCIG~~N~r~FilfL~~~~~~~~----~~~~~~~~~~  215 (278)
                      .  ++.-.++|..|+.+|+||||||+.|||||.+|||||||+|||||.+||.+|..||++..+++.    ......++-+
T Consensus        86 ~--D~~~lqfCk~CqgYKapRSHHCrkCnrCvmkMDHHCPWinnCVG~aNh~~F~~FLlf~ivG~ih~tiI~~~~~~~~I  163 (414)
T KOG1314|consen   86 K--DEMFLQFCKKCQGYKAPRSHHCRKCNRCVMKMDHHCPWINNCVGWANHAYFLRFLLFSIVGCIHGTIILVCAQYRGI  163 (414)
T ss_pred             h--hHHHHHHHhhccCcCCCccccchHHHHHHHhhccCCcchhhcccccccHHHHHHHHHHHHhcccceeeehhHHHHHH
Confidence            2  223458999999999999999999999999999999999999999999999999998877432    1111111111


Q ss_pred             hhhc----CCCCCc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchhccc
Q 023696          216 GKSQ----NFDKSQ--SENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDELT  270 (278)
Q Consensus       216 ~~~~----~~~~~~--~~~~~~~~l~i~~~i~~~~~~~~~~~ll~~hl~li~~n~TT~E~~  270 (278)
                      ...+    ......  ..........++.+.+++...+.++.|+..|+..|.+|+|.+|.+
T Consensus       164 y~~W~~~~g~~hlp~v~ft~~~li~~vfslgla~gv~la~t~Lf~~qlk~Il~nrt~IE~w  224 (414)
T KOG1314|consen  164 YFRWYIKYGLRHLPIVFFTLSSLIALVFSLGLAIGVVLALTMLFFIQLKQILNNRTGIESW  224 (414)
T ss_pred             HHHHHhhcccccCceeeccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCcchHHH
Confidence            1111    111111  112222333333444555667778889999999999999999998

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=5.2e-37  Score=280.58  Aligned_cols=162  Identities=23%  Similarity=0.254  Sum_probs=113.3

Q ss_pred             HHHHHHHHHHHHHHh---cCCCcCCCCC--CCchh---hh-------cCCCCCCCCCCCCCCCCCCcccccccceeeccc
Q 023696          110 IEVAMIIIGLCSIMS---KDPGLITNEF--PHLDK---LV-------EGSELGVDPDNENSLSRKRVRYCKICKAHVEGF  174 (278)
Q Consensus       110 ~l~~~~~~s~~~~~~---~dPG~vp~~~--~~~~~---~~-------~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~  174 (278)
                      ++....+.....+..   +|||.+|++.  +.+..   ..       ..+.+.++|++|+..||+|||||+.||+||.||
T Consensus        61 if~~~~~~~~~~~~~~~~sdpg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~rPpRs~HCsvC~~CV~rf  140 (299)
T KOG1311|consen   61 IFFLLNILNLMLACFRMLSDPGIVPRADDEQIEDPERAPLYKNVDVNGIQVEWKYCDTCQLYRPPRSSHCSVCNNCVLRF  140 (299)
T ss_pred             HHHHHHHHHHHHHHhcccCCCceecCcccCCCCCccccccCCCcccCCcccceEEcCcCcccCCCCcccchhhccccccc
Confidence            333333444444443   4999999952  21111   00       011247899999999999999999999999999


Q ss_pred             ccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCCCcC--CChHHHHHHHHHHHHHHHHHHHHHH
Q 023696          175 DHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQN-FDKSQS--ENDWVVNLATSTMLFSILQLLWQAV  251 (278)
Q Consensus       175 DHHCpWl~nCIG~~N~r~FilfL~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~l~i~~~i~~~~~~~~~~~  251 (278)
                      ||||||+|||||+||||+|+.|+++..++..+.+......+..... ......  .........+...+++++....++.
T Consensus       141 DHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  220 (299)
T KOG1311|consen  141 DHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFYELLQRADNLKVNLTPVLIPAGTFLSALLGLLSALFLAFTSA  220 (299)
T ss_pred             CCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999997777655544443333322111 111111  2222333445556778888889999


Q ss_pred             HHHHHHHHHhcCcchhcccc
Q 023696          252 FFMWHIYCVCFNVRTDELTG  271 (278)
Q Consensus       252 ll~~hl~li~~n~TT~E~~~  271 (278)
                      ++.+|++++.+|+||+|+++
T Consensus       221 l~~fh~~li~~~~Tt~e~~~  240 (299)
T KOG1311|consen  221 LLCFHIYLIKSGSTTYESIK  240 (299)
T ss_pred             HHHhheeeEecCcchhhhhh
Confidence            99999999999999999984

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=100.00  E-value=1.5e-35  Score=270.80  Aligned_cols=183  Identities=19%  Similarity=0.308  Sum_probs=133.0

Q ss_pred             HhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCCCc------hh--hhcCCCCCCCCCCCCCCC
Q 023696           86 LFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHL------DK--LVEGSELGVDPDNENSLS  157 (278)
Q Consensus        86 ~~~~~~y~~v~~~~~~~~~~ii~~~l~~~~~~s~~~~~~~dPG~vp~~~~~~------~~--~~~~~~~~~~C~~C~~~k  157 (278)
                      ...|.....+..........+.+.+.......++++...+|||+.+++....      ++  +......+++|.+|+.+|
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~K  119 (309)
T COG5273          40 IVVYTLLVIVKSLSLVVLFIILFIVILVLASFSYLLLLVSDPGYLGENITLSGYRETISRLLDDGKFGTENFCSTCNIYK  119 (309)
T ss_pred             HHHHhhhheeeeccchhhhhhhhhhhhhhHHHhhHHHhhcCCCccCccccccchhhhhhhhhhcCccccceecccccccc
Confidence            4555554444444455666777888888999999999999999998653211      11  122335689999999999


Q ss_pred             CCCcccccccceeecccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcCCChHHHHHHHH
Q 023696          158 RKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATS  237 (278)
Q Consensus       158 P~Rs~HC~~C~~CV~r~DHHCpWl~nCIG~~N~r~FilfL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~  237 (278)
                      |+|||||+.|||||+||||||||+|||||.+|||+|+.|+++........+.....+.........  ..+.+...++..
T Consensus       120 P~RS~HC~~Cn~CV~k~DHHC~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~  197 (309)
T COG5273         120 PPRSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIFSIRH--DTSLAICFLIFG  197 (309)
T ss_pred             CCCCccchhhcchhhccCccCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccC--ChHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999987666555544444443322211  112221112222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCcchhccc
Q 023696          238 TMLFSILQLLWQAVFFMWHIYCVCFNVRTDELT  270 (278)
Q Consensus       238 ~~i~~~~~~~~~~~ll~~hl~li~~n~TT~E~~  270 (278)
                      ....+...+..+..++.++.+++..|+|+.|..
T Consensus       198 ~~~~~~~~f~~~~~~~~~~~~~~~~~~t~~e~~  230 (309)
T COG5273         198 CSLLGVVFFIITTLLLLFLIYLILNNLTTIEFI  230 (309)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            234555556777888999999999999999998

>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=3.1e-33  Score=243.66  Aligned_cols=149  Identities=18%  Similarity=0.204  Sum_probs=107.8

Q ss_pred             HHHHHHHHHHHHHhcCCCcCCCCCCCchhhhcCCCCCCCCCCCCCCCCCCcccccccceeecccccccccccccccccch
Q 023696          111 EVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNY  190 (278)
Q Consensus       111 l~~~~~~s~~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHCpWl~nCIG~~N~  190 (278)
                      ++...++.|+++....|    ...       +..+...+|.+|+.+||||+|||+.|||||+||||||||+|||||.+||
T Consensus        77 ~l~nvi~hy~ka~t~pP----vgn-------~~~~~~SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NH  145 (309)
T KOG1313|consen   77 LLSNVIFHYYKARTKPP----VGN-------PGLENDSFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNH  145 (309)
T ss_pred             HHHHHHHhheeecccCC----cCC-------CCCccccHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccc
Confidence            44556667788776665    111       1112347999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCC--------CcCCCh----------HHHHHHHHHHHHHHHHHHHHHHH
Q 023696          191 FLFIVLLVGFLATEASYVACSAQFVGKSQNFDK--------SQSEND----------WVVNLATSTMLFSILQLLWQAVF  252 (278)
Q Consensus       191 r~FilfL~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~----------~~~~l~i~~~i~~~~~~~~~~~l  252 (278)
                      |||++|++|+.+++.+..+...+.+.+.....+        .....|          +.-.-+......+....+.++.+
T Consensus       146 ryFFlFl~~ltlat~~~~i~~~~~w~~~le~~~~~tay~~d~~h~~Pp~~i~r~~~~i~~t~~~~~~fls~~~lv~vg~l  225 (309)
T KOG1313|consen  146 RYFFLFLFYLTLATSYAAIMCVYTWIDHLEPIEEITAYASDVAHVAPPPSILRVYKNITRTSIANLWFLSVRVLVAVGLL  225 (309)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhcccccCcccccCCChhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999888776655555543322110        000111          00001222444566677788999


Q ss_pred             HHHHHHHHhcCcchhccc
Q 023696          253 FMWHIYCVCFNVRTDELT  270 (278)
Q Consensus       253 l~~hl~li~~n~TT~E~~  270 (278)
                      ..+|.++|.+|.|++|..
T Consensus       226 ~~W~~vlI~~G~tsi~~~  243 (309)
T KOG1313|consen  226 TAWHAVLISRGETSIEQL  243 (309)
T ss_pred             HHHhheeeehhhhhHHHH
Confidence            999999999999999988

>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=99.97  E-value=1.5e-30  Score=227.99  Aligned_cols=103  Identities=26%  Similarity=0.333  Sum_probs=81.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCCCchhh-hcCC----CCCCCCCCCCCCCCCCcccccccceeecccc
Q 023696          101 SSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKL-VEGS----ELGVDPDNENSLSRKRVRYCKICKAHVEGFD  175 (278)
Q Consensus       101 ~~~~~ii~~~l~~~~~~s~~~~~~~dPG~vp~~~~~~~~~-~~~~----~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~D  175 (278)
                      +...-+....+.+.-..++..++.+|||.+.++.+..... -+-|    .+.+.|+||+.+||.||||||.|||||.|||
T Consensus        97 sl~~~il~~l~vivp~i~f~ltc~snpg~i~k~n~s~~~~~ypYDy~if~k~~kCSTCki~KPARSKHCsiCNrCV~rfD  176 (341)
T KOG1312|consen   97 SLHYLILPYLLVIVPLIFFTLTCGSNPGIITKANESLFLHVYPYDYVIFPKNVKCSTCKIRKPARSKHCSICNRCVHRFD  176 (341)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhhhccceeccCccceeecCCCccccccCCCccccccchHHHHHHHHhc
Confidence            3334444445556667788899999999999875543211 1112    2448899999999999999999999999999


Q ss_pred             cccccccccccccchHHHHHHHHHHHHH
Q 023696          176 HHCPAFGNCIGQNNYFLFIVLLVGFLAT  203 (278)
Q Consensus       176 HHCpWl~nCIG~~N~r~FilfL~~~~~~  203 (278)
                      |||.|+|||||++|.|||++|+++...+
T Consensus       177 HHCiWiNNCIG~~N~ryF~lFLL~~i~l  204 (341)
T KOG1312|consen  177 HHCIWINNCIGAWNIRYFLLFLLTLISL  204 (341)
T ss_pred             cceEeeecccccchHHHHHHHHHHHHHH
Confidence            9999999999999999999999988543

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.96  E-value=4e-29  Score=239.34  Aligned_cols=191  Identities=23%  Similarity=0.355  Sum_probs=126.4

Q ss_pred             HHHHHhhhhhhhhhhc--cchhhHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCCCchhh------hcCCCCC-CCCCC
Q 023696           82 FFNILFIWGFYIAVVR--QAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKL------VEGSELG-VDPDN  152 (278)
Q Consensus        82 ~~~~~~~~~~y~~v~~--~~~~~~~~ii~~~l~~~~~~s~~~~~~~dPG~vp~~~~~~~~~------~~~~~~~-~~C~~  152 (278)
                      ...+...|.++.+...  +...+.....+.+..+..++++.+...+|||++|...+...+.      ..+...+ ++|.+
T Consensus       346 ~~~~~~fw~~~~w~~~i~~~~~~~~~~~~i~~~l~~~~~f~~~~rsDPg~i~~~~~~~~~tIs~l~d~gkf~~en~FC~~  425 (600)
T KOG0509|consen  346 FFLSTLFWFYYFWFSKITPYTLFDFHYCFIISVLAYFITFGLFLRSDPGFIPTSTEVGRETISQLIDFGKFDLENRFCLT  425 (600)
T ss_pred             HHHHHHHHHHHhhheeccchhhhhhHHHHHHHHHHHHHHHHHHhccCCCCCCCchhhHHHHHHHhhccccccccccceee
Confidence            3456666766665541  1233334455555566667777888889999999886544221      1112234 69999


Q ss_pred             CCCCCCCCcccccccceeecccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcCCChHHH
Q 023696          153 ENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVV  232 (278)
Q Consensus       153 C~~~kP~Rs~HC~~C~~CV~r~DHHCpWl~nCIG~~N~r~FilfL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (278)
                      |.++||.|||||+.|||||.||||||||++||||.+|||+|+.|++.....+.++++....++....+..     ..+..
T Consensus       426 clirKp~rSkhc~vcnrcVarfDHhCPwi~ncVG~kNh~~F~~Fl~~l~~~~~~~l~~~~~y~~~~~~~~-----~~~~~  500 (600)
T KOG0509|consen  426 CLIRKPLRSKHCSVCNRCVARFDHHCPWIGNCVGLKNHRLFVFFLLTLLTVIVFYLYLCLYYIMNLENAS-----TIYVG  500 (600)
T ss_pred             eeeecCCccchhhhhHHHHhccccCCCccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH-----HHHHH
Confidence            9999999999999999999999999999999999999999999999998888787776666664322110     11111


Q ss_pred             HHHHHHHHHHH-------------HHHHHHHHH-HHHHHHHHhcCcchhccc-cccCCCCC
Q 023696          233 NLATSTMLFSI-------------LQLLWQAVF-FMWHIYCVCFNVRTDELT-GRNIPSFK  278 (278)
Q Consensus       233 ~l~i~~~i~~~-------------~~~~~~~~l-l~~hl~li~~n~TT~E~~-~~r~~~~~  278 (278)
                      . .+.+..+..             +.-.+.... -..|-..++.+.||+|.+ .+|+++++
T Consensus       501 ~-l~~~~~~~~~~~~~~~~~~n~~~~~t~~~~~~~~~~~~~~c~~~tt~e~~n~~r~~~~~  560 (600)
T KOG0509|consen  501 F-LIAVQAFRIPKPVTGNLLGNEDLNPTWGSTSTKCQHYNCACLHLTTNEQINVKRYEHLG  560 (600)
T ss_pred             H-HHHHHHHhCCccceeeeeeccccccccccccccccccceeeecccHHHHHHHHHhhccc
Confidence            1 111111110             001111222 233445688899999999 88888864

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=94.10  E-value=0.15  Score=46.63  Aligned_cols=42  Identities=17%  Similarity=0.411  Sum_probs=33.7

Q ss_pred             Ccccccccceeecccccccccccccccccc-----------hHHHHHHHHHHH
Q 023696          160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNN-----------YFLFIVLLVGFL  201 (278)
Q Consensus       160 Rs~HC~~C~~CV~r~DHHCpWl~nCIG~~N-----------~r~FilfL~~~~  201 (278)
                      +.|+|..|+..+.++-|||+.-|+||-+.=           +|.+-.|+.+..
T Consensus       112 ~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~  164 (299)
T KOG1311|consen  112 EWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLF  164 (299)
T ss_pred             ceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHH
Confidence            378899999999999999999999998774           467777875544

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.13  E-value=1.5  Score=36.28  Aligned_cols=51  Identities=12%  Similarity=0.058  Sum_probs=37.9

Q ss_pred             CCCCCCCCCCCCCCCCCcccccccceeecccccccccccccccccchHHHHHHHHHHHHHHH
Q 023696          144 SELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEA  205 (278)
Q Consensus       144 ~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHCpWl~nCIG~~N~r~FilfL~~~~~~~~  205 (278)
                      ..+.++|+.|+.-...+-|||.--|.||.+..|           +.+=.|+.+.....+...
T Consensus        59 p~Rs~HC~~C~~CV~~~DHHC~w~~~cIG~~N~-----------~~F~~fl~~~~~~~~~~~  109 (174)
T PF01529_consen   59 PPRSHHCRVCNRCVLRFDHHCPWLGNCIGRRNH-----------RYFLLFLLYLCLYCLYFF  109 (174)
T ss_pred             CCcceeccccccccccccccchhhccccccccH-----------HHHHHHHHHHHHHHHHHH
Confidence            346789999999999999999999999998766           345567666654444333

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=89.38  E-value=2.9  Score=38.64  Aligned_cols=117  Identities=11%  Similarity=-0.078  Sum_probs=70.2

Q ss_pred             CCCCCCCCCCCCCCCCCCcccccccceeecccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 023696          143 GSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFD  222 (278)
Q Consensus       143 ~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHCpWl~nCIG~~N~r~FilfL~~~~~~~~~~~~~~~~~~~~~~~~~  222 (278)
                      +.++.++|+.|+.=-...-|||.-=|+||.+..|           |=.-.|+.++....+...+..............+.
T Consensus       119 KP~RS~HC~~Cn~CV~k~DHHC~Wi~nCVG~~N~-----------r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (309)
T COG5273         119 KPPRSHHCSICNRCVLKFDHHCPWINNCVGFRNY-----------RFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHDT  187 (309)
T ss_pred             cCCCCccchhhcchhhccCccCcccccccCcchH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCh
Confidence            3456789999999999999999999999998654           55667887775554433332222222222111111


Q ss_pred             CCc------CCChHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchhccc
Q 023696          223 KSQ------SENDWVV-NLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDELT  270 (278)
Q Consensus       223 ~~~------~~~~~~~-~l~i~~~i~~~~~~~~~~~ll~~hl~li~~n~TT~E~~  270 (278)
                      ...      ....... .+.+....+......+.......+.+...++.++-|..
T Consensus       188 ~~~~~~li~~~~~~~~~~f~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~  242 (309)
T COG5273         188 SLAICFLIFGCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISRGGSTLEFF  242 (309)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccceeccccc
Confidence            111      1111111 12233333344445566667788889999999999887

>PF13240 zinc_ribbon_2: zinc-ribbon domain

Probab=89.32  E-value=0.22  Score=27.67  Aligned_cols=21  Identities=14%  Similarity=0.298  Sum_probs=18.8

Q ss_pred             CCCCCCCCCCCCcccccccce
Q 023696          149 DPDNENSLSRKRVRYCKICKA  169 (278)
Q Consensus       149 ~C~~C~~~kP~Rs~HC~~C~~  169 (278)
                      +|+.|...-++.++.|+.||.
T Consensus         1 ~Cp~CG~~~~~~~~fC~~CG~   21 (23)
T PF13240_consen    1 YCPNCGAEIEDDAKFCPNCGT   21 (23)
T ss_pred             CCcccCCCCCCcCcchhhhCC
Confidence            689999999999999999985

>PRK04136 rpl40e 50S ribosomal protein L40e; Provisional

Probab=88.07  E-value=0.24  Score=32.57  Aligned_cols=26  Identities=15%  Similarity=-0.014  Sum_probs=22.8

Q ss_pred             CCCCCCCCCCCCCCCCCcccccccce
Q 023696          144 SELGVDPDNENSLSRKRVRYCKICKA  169 (278)
Q Consensus       144 ~~~~~~C~~C~~~kP~Rs~HC~~C~~  169 (278)
                      .....+|..|..+-|+|+..|+.||.
T Consensus        11 ~~~k~ICrkC~ARnp~~A~~CRKCg~   36 (48)
T PRK04136         11 VFNKKICMRCNARNPWRATKCRKCGY   36 (48)
T ss_pred             hhcccchhcccCCCCccccccccCCC
Confidence            34568999999999999999999886

>PF13248 zf-ribbon_3: zinc-ribbon domain

Probab=87.60  E-value=0.35  Score=27.61  Aligned_cols=23  Identities=17%  Similarity=0.260  Sum_probs=19.8

Q ss_pred             CCCCCCCCCCCCCCcccccccce
Q 023696          147 GVDPDNENSLSRKRVRYCKICKA  169 (278)
Q Consensus       147 ~~~C~~C~~~kP~Rs~HC~~C~~  169 (278)
                      ..+|+.|...-++.++.|+.||.
T Consensus         2 ~~~Cp~Cg~~~~~~~~fC~~CG~   24 (26)
T PF13248_consen    2 EMFCPNCGAEIDPDAKFCPNCGA   24 (26)
T ss_pred             cCCCcccCCcCCcccccChhhCC
Confidence            36899999988999999999985

>PF06906 DUF1272: Protein of unknown function (DUF1272); InterPro: IPR010696 This family consists of several hypothetical bacterial proteins of around 80 residues in length

Probab=85.19  E-value=0.41  Score=32.59  Aligned_cols=37  Identities=22%  Similarity=0.416  Sum_probs=29.5

Q ss_pred             CCCCCCCCCCCCCc-------ccccccceeeccc-ccccccccccccc
Q 023696          148 VDPDNENSLSRKRV-------RYCKICKAHVEGF-DHHCPAFGNCIGQ  187 (278)
Q Consensus       148 ~~C~~C~~~kP~Rs-------~HC~~C~~CV~r~-DHHCpWl~nCIG~  187 (278)
                      .-|+.|+..-|+-|       +-|..|..|+... +++||   ||=|.
T Consensus         6 pnCE~C~~dLp~~s~~A~ICSfECTFC~~C~e~~l~~~CP---NCgGe   50 (57)
T PF06906_consen    6 PNCECCDKDLPPDSPEAYICSFECTFCADCAETMLNGVCP---NCGGE   50 (57)
T ss_pred             CCccccCCCCCCCCCcceEEeEeCcccHHHHHHHhcCcCc---CCCCc
Confidence            45788877766654       6688999999998 99999   88775

This family contains a number of conserved cysteine residues and its function is unknown.

>PTZ00303 phosphatidylinositol kinase; Provisional

Probab=81.10  E-value=1  Score=46.17  Aligned_cols=22  Identities=14%  Similarity=0.166  Sum_probs=17.7

Q ss_pred             CCCCCCCCCCC-------CCcccccccce
Q 023696          148 VDPDNENSLSR-------KRVRYCKICKA  169 (278)
Q Consensus       148 ~~C~~C~~~kP-------~Rs~HC~~C~~  169 (278)
                      +.|..|+..-.       .|-||||.||+
T Consensus       461 dtC~~C~kkFfSlsK~L~~RKHHCRkCGr  489 (1374)
T PTZ00303        461 DSCPSCGRAFISLSRPLGTRAHHCRSCGI  489 (1374)
T ss_pred             CcccCcCCcccccccccccccccccCCcc
Confidence            56999987664       39999999876

>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]

Probab=80.72  E-value=26  Score=33.00  Aligned_cols=70  Identities=11%  Similarity=-0.035  Sum_probs=49.7

Q ss_pred             HHHHHhcCCCcCCCCCCCchhh-------hcCCCCCCCCCCCCCCCCCCcccccccceeecccccccccccccccccchH
Q 023696          119 LCSIMSKDPGLITNEFPHLDKL-------VEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYF  191 (278)
Q Consensus       119 ~~~~~~~dPG~vp~~~~~~~~~-------~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHCpWl~nCIG~~N~r  191 (278)
                      +.---+..||+-|++..+....       +.+.+..+.|.+|+.-.-.--|||+--|.||--..|           .-.-
T Consensus        70 ~~gPG~vp~~wkPe~~~D~~~lqfCk~CqgYKapRSHHCrkCnrCvmkMDHHCPWinnCVG~aNh-----------~~F~  138 (414)
T KOG1314|consen   70 FTGPGFVPLGWKPENPKDEMFLQFCKKCQGYKAPRSHHCRKCNRCVMKMDHHCPWINNCVGWANH-----------AYFL  138 (414)
T ss_pred             hcCCCCCCCCCCCCCChhHHHHHHHhhccCcCCCccccchHHHHHHHhhccCCcchhhccccccc-----------HHHH
Confidence            3444567899999876653221       223456789999998777788999999999986655           3356


Q ss_pred             HHHHHHHH
Q 023696          192 LFIVLLVG  199 (278)
Q Consensus       192 ~FilfL~~  199 (278)
                      +|++|...
T Consensus       139 ~FLlf~iv  146 (414)
T KOG1314|consen  139 RFLLFSIV  146 (414)
T ss_pred             HHHHHHHH
Confidence            77777764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	278
2ayj_A	56	50S ribosomal protein L40E; Zn-binding, beta-stran	85.46
1z2q_A	84	LM5-1; membrane protein, FYVE domain, zinc-finger;	83.78
3j21_g	51	50S ribosomal protein L40E; archaea, archaeal, KIN	81.55
1x4u_A	84	Zinc finger, FYVE domain containing 27 isoform B;	81.49
2yw8_A	82	RUN and FYVE domain-containing protein 1; structur	80.23

>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7

Probab=85.46  E-value=0.31  Score=32.22  Aligned_cols=30  Identities=17%  Similarity=0.140  Sum_probs=25.0

Q ss_pred             CCCCCCCCCCCCCCCCCcccccccceeecc
Q 023696          144 SELGVDPDNENSLSRKRVRYCKICKAHVEG  173 (278)
Q Consensus       144 ~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r  173 (278)
                      .....+|..|..+-|+|+..|+.||.--+|
T Consensus        16 ~~~k~ICrkC~ARnp~~A~~CRKCg~~~LR   45 (56)
T 2ayj_A           16 VFLKKVCRKCGALNPIRATKCRRCHSTNLR   45 (56)
T ss_dssp             SCCCEEETTTCCEECTTCSSCTTTCCCCEE
T ss_pred             HhchhhhccccCcCCcccccccCCCCCCCC
Confidence            345678999999999999999999865544

>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}

Probab=83.78  E-value=0.89  Score=32.52  Aligned_cols=28  Identities=14%  Similarity=0.209  Sum_probs=19.9

Q ss_pred             CCCCCCCCCCCCC--CCCCcccccccceee
Q 023696          144 SELGVDPDNENSL--SRKRVRYCKICKAHV  171 (278)
Q Consensus       144 ~~~~~~C~~C~~~--kP~Rs~HC~~C~~CV  171 (278)
                      +.....|..|+..  --.|-|||+.||+-+
T Consensus        18 d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~   47 (84)
T 1z2q_A           18 DEDAPACNGCGCVFTTTVRRHHCRNCGYVL   47 (84)
T ss_dssp             TTTCCBCTTTCCBCCTTSCCEECTTTCCEE
T ss_pred             CCCCCCCcCcCCccccchhcccccCCCcEE
Confidence            3445678888753  346889999998753

>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}

Probab=81.55  E-value=0.27  Score=32.05  Aligned_cols=29  Identities=7%  Similarity=-0.105  Sum_probs=24.4

Q ss_pred             CCCCCCCCCCCCCCCCcccccccceeecc
Q 023696          145 ELGVDPDNENSLSRKRVRYCKICKAHVEG  173 (278)
Q Consensus       145 ~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r  173 (278)
                      .....|+.|....|+++..|+.||.--+|
T Consensus        12 ~~k~iCpkC~a~~~~gaw~CrKCG~~~lr   40 (51)
T 3j21_g           12 FKKYVCLRCGATNPWGAKKCRKCGYKRLR   40 (51)
T ss_dssp             SSEEECTTTCCEECTTCSSCSSSSSCCCE
T ss_pred             hCCccCCCCCCcCCCCceecCCCCCcccc
Confidence            45578999999999999999999875444

>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=81.49  E-value=1.2  Score=31.70  Aligned_cols=26  Identities=15%  Similarity=0.105  Sum_probs=18.9

Q ss_pred             CCCCCCCCCCC--CCCCcccccccceee
Q 023696          146 LGVDPDNENSL--SRKRVRYCKICKAHV  171 (278)
Q Consensus       146 ~~~~C~~C~~~--kP~Rs~HC~~C~~CV  171 (278)
                      ....|..|+..  --.|-|||+.||+-+
T Consensus        13 ~~~~C~~C~~~F~~~~RrHHCR~CG~vf   40 (84)
T 1x4u_A           13 NFGNCTGCSATFSVLKKRRSCSNCGNSF   40 (84)
T ss_dssp             CCSSCSSSCCCCCSSSCCEECSSSCCEE
T ss_pred             CCCcCcCcCCccccchhhhhhcCCCcEE
Confidence            34678888753  456889999998743

>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A

Probab=80.23  E-value=1.1  Score=31.87  Aligned_cols=27  Identities=11%  Similarity=0.178  Sum_probs=19.2

Q ss_pred             CCCCCCCCCCCC--CCCCcccccccceee
Q 023696          145 ELGVDPDNENSL--SRKRVRYCKICKAHV  171 (278)
Q Consensus       145 ~~~~~C~~C~~~--kP~Rs~HC~~C~~CV  171 (278)
                      .....|..|+..  --.|-|||+.||+-+
T Consensus        17 ~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~   45 (82)
T 2yw8_A           17 DEATHCRQCEKEFSISRRKHHCRNCGHIF   45 (82)
T ss_dssp             CCCCBCTTTCCBCBTTBCCEECTTTCCEE
T ss_pred             ccCCcccCcCCcccCccccccCCCCCCEE
Confidence            344668888753  346889999998854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	278
d2ayja1	56	Ribosomal protein L40e {Sulfolobus solfataricus [T	89.74

>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=89.74  E-value=0.06  Score=33.89  Aligned_cols=26  Identities=19%  Similarity=0.241  Sum_probs=22.6

Q ss_pred             CCCCCCCCCCCCCCCCCcccccccce
Q 023696          144 SELGVDPDNENSLSRKRVRYCKICKA  169 (278)
Q Consensus       144 ~~~~~~C~~C~~~kP~Rs~HC~~C~~  169 (278)
                      ......|..|..+-|+|+..|+.|+.
T Consensus        16 ~~~k~ICrkC~AR~p~rAt~CRKCg~   41 (56)
T d2ayja1          16 VFLKKVCRKCGALNPIRATKCRRCHS   41 (56)
T ss_dssp             SCCCEEETTTCCEECTTCSSCTTTCC
T ss_pred             hhhhHHHhhccccCCccccccccCCC
Confidence            34567899999999999999998876